prot_E_fasciculatus_S2_contig6650.14747.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig6650.14747.1
Unique Nameprot_E_fasciculatus_S2_contig6650.14747.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length144
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: D8LQX3_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQX3_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 9.110e-95
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143
            MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD
Sbjct:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: A0A835YZE0_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE0_9STRA)

HSP 1 Score: 246 bits (627), Expect = 8.340e-82
Identity = 123/143 (86.01%), Postives = 139/143 (97.20%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143
            MIRFLLLQNRQGKTRLSKW+IPL+DE+EK +IEN+VHRLVV+RDRKYTNF+EY +YK+IYRRYAGLFFT G+DVNDNELLALETVHLFVELL+SYFSNVCELDIVFNFNKVYNILDEFILSGEV+ES+K EILDR+RE+EKL+
Sbjct:    1 MIRFLLLQNRQGKTRLSKWYIPLYDEQEKNKIENDVHRLVVSRDRKYTNFIEYQSYKIIYRRYAGLFFTLGVDVNDNELLALETVHLFVELLDSYFSNVCELDIVFNFNKVYNILDEFILSGEVQESAKPEILDRVRELEKLE 143          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: A0A7S2CS13_9STRA (AP complex subunit sigma n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CS13_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.650e-70
Identity = 107/141 (75.89%), Postives = 127/141 (90.07%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEK 141
            MIRF LLQNRQGKTRLSKW++    ++EK R+E E+HRLVV RDRKYT+F+E+  YKL+YRRYAGLFFT G+DVNDNELL LET+HLFVELL+ YFSNVCELDIVFNFNKVY ILDEFIL+GE++E+SK+EIL+RI+EVEK
Sbjct:    4 MIRFFLLQNRQGKTRLSKWYVAPAQDREKSRLEAEIHRLVVGRDRKYTSFIEFMNYKLVYRRYAGLFFTIGIDVNDNELLYLETIHLFVELLDQYFSNVCELDIVFNFNKVYGILDEFILAGEIQETSKKEILERIKEVEK 144          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: F0W4M2_9STRA (AP-2 complex subunit sigma n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4M2_9STRA)

HSP 1 Score: 218 bits (554), Expect = 6.590e-70
Identity = 106/143 (74.13%), Postives = 131/143 (91.61%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143
            MIRF LLQNRQGKTRLSKW++P  D++EK R+ENE+HRLVV+RD K+TNF+E+ +YKLIYRRYAGLFF  G+D++ NELL+LET+HLFVELL+  FSNVCELDIVFNFNKVY++LDE+IL GEV+E+SKRE+LDRIRE+EKL+
Sbjct:   55 MIRFFLLQNRQGKTRLSKWYVPAPDDQEKFRLENEIHRLVVSRDAKHTNFIEFRSYKLIYRRYAGLFFILGVDLHANELLSLETIHLFVELLDQQFSNVCELDIVFNFNKVYSMLDEYILGGEVQETSKREMLDRIRELEKLE 197          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: A0A024GMS7_9STRA (AP complex subunit sigma n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMS7_9STRA)

HSP 1 Score: 214 bits (546), Expect = 5.290e-69
Identity = 103/143 (72.03%), Postives = 131/143 (91.61%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143
            MIRF L+QNRQGKTRLSKW++P  D++EK R+E+E+HRLV++RD K+TNF+E+ +YKLIYRRYAGLFF  G+D++ NELL+LET+HLFVELL+  FSNVCELDIVFNFNKVY++LDE+IL GEV+E+SKRE+LDRIRE+EKL+
Sbjct:   33 MIRFFLMQNRQGKTRLSKWYVPAPDDQEKFRLEHEIHRLVISRDAKHTNFIEFRSYKLIYRRYAGLFFILGVDLHANELLSLETIHLFVELLDQQFSNVCELDIVFNFNKVYSMLDEYILGGEVQETSKREMLDRIRELEKLE 175          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: A0A7S3L6S1_9STRA (AP complex subunit sigma n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A7S3L6S1_9STRA)

HSP 1 Score: 212 bits (540), Expect = 2.100e-68
Identity = 109/153 (71.24%), Postives = 128/153 (83.66%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIP----------LHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143
            MIRF LLQNRQGKTRLSKW++P           + E EKVRIE E HRLV  RD+KYTNF+EY +YKLIYRRYAGLFFT  +DV DNEL  LET+HLFVELL+SYFSNVCELDIVFNFNKVY+ILDEF+L+GE+EE+SKREILDR++ +EK++
Sbjct:    1 MIRFFLLQNRQGKTRLSKWYVPPPTQTQSGTTANAEAEKVRIEAECHRLVTARDKKYTNFIEYNSYKLIYRRYAGLFFTIAVDVTDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNKVYSILDEFMLAGELEETSKREILDRVKMLEKME 153          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: A0A7S0FJC4_9STRA (AP complex subunit sigma n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FJC4_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.700e-68
Identity = 107/150 (71.33%), Postives = 128/150 (85.33%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHD-------EKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143
            MIRF LLQNRQGKTRLSKW++P          E EK RIE+EVHRLV +RD+KYTNF+EY +YKLIYRRYAGLFFT  +D+ DNEL  LET+HLFVELL+SYFSNVCELDIVFNFN+VY ILDE+IL+GE+EE+SK+EILDR++ +EKL+
Sbjct:    1 MIRFFLLQNRQGKTRLSKWYVPPPSSTGGGSPEAEKARIESEVHRLVTSRDKKYTNFIEYASYKLIYRRYAGLFFTIAVDITDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNRVYMILDEYILAGEIEETSKKEILDRVKVLEKLE 150          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: A0A7S4IKL5_9STRA (AP complex subunit sigma n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4IKL5_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.210e-67
Identity = 108/153 (70.59%), Postives = 127/153 (83.01%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIP----------LHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143
            MIRF LLQNRQGKTRLSKW++P             E EK RIE EVHRLV +RD+KYTNF+EY  YKLIYRRYAGLFFT  +DV DNEL  LET+HLFVELL+SYFSNVCELDIVFNFNKVY+ILDE++L+GE+EE+SKREILDR++ +EK++
Sbjct:    1 MIRFFLLQNRQGKTRLSKWYVPPPTSTNGTHHSSPEAEKTRIEAEVHRLVTSRDKKYTNFIEYNNYKLIYRRYAGLFFTIAVDVADNELSYLETIHLFVELLDSYFSNVCELDIVFNFNKVYSILDEYMLAGEIEETSKREILDRVKFMEKME 153          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: A0A4D9D180_9STRA (AP complex subunit sigma n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D180_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.080e-67
Identity = 104/140 (74.29%), Postives = 126/140 (90.00%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVE 140
            MIRFLLLQNRQGKTRLSKW+I   +E EK R+E +VH+L+V+RDRKYTNFVEY  YKLIYRRYAGL+F+ G+DV DNEL  LE++HLFVELL+ YF NVCELDIVFNFNKVY+ILDEFIL+GE++E+SKREIL+RIR+++
Sbjct:    1 MIRFLLLQNRQGKTRLSKWYILPPNEAEKFRLEADVHKLIVSRDRKYTNFVEYQNYKLIYRRYAGLYFSLGVDVTDNELAYLESIHLFVELLDEYFRNVCELDIVFNFNKVYSILDEFILAGEIQETSKREILERIRDMQ 140          
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Match: H3GDE6_PHYRM (AP complex subunit sigma n=27 Tax=Oomycota TaxID=4762 RepID=H3GDE6_PHYRM)

HSP 1 Score: 209 bits (532), Expect = 2.500e-67
Identity = 103/143 (72.03%), Postives = 126/143 (88.11%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143
            MIRF LLQNRQGKTRLSKW++P  +++EK R+E E+HRLVV RD K+TNF+E+  YKLIYRRYAGLFF  G+D+  NELL LET+HLFVELL+  F+NVCELDIVFNFNKVY++LDE+IL GEV+E+SKRE+LDRIRE+EKL+
Sbjct:    1 MIRFFLLQNRQGKTRLSKWYVPPPEDQEKARLEAEIHRLVVARDAKHTNFIEFRNYKLIYRRYAGLFFILGVDLAANELLGLETIHLFVELLDQQFANVCELDIVFNFNKVYSMLDEYILGGEVQETSKREMLDRIRELEKLE 143          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6650.14747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQX3_ECTSI9.110e-95100.00AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YZE0_9STRA8.340e-8286.01AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
A0A7S2CS13_9STRA2.650e-7075.89AP complex subunit sigma n=1 Tax=Dictyocha speculu... [more]
F0W4M2_9STRA6.590e-7074.13AP-2 complex subunit sigma n=1 Tax=Albugo laibachi... [more]
A0A024GMS7_9STRA5.290e-6972.03AP complex subunit sigma n=1 Tax=Albugo candida Ta... [more]
A0A7S3L6S1_9STRA2.100e-6871.24AP complex subunit sigma n=2 Tax=Bacillariophycida... [more]
A0A7S0FJC4_9STRA2.700e-6871.33AP complex subunit sigma n=1 Tax=Minutocellus poly... [more]
A0A7S4IKL5_9STRA1.210e-6770.59AP complex subunit sigma n=5 Tax=Bacillariophyta T... [more]
A0A4D9D180_9STRA2.080e-6774.29AP complex subunit sigma n=1 Tax=Nannochloropsis s... [more]
H3GDE6_PHYRM2.500e-6772.03AP complex subunit sigma n=27 Tax=Oomycota TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..142
e-value: 1.8E-49
score: 167.3
IPR016635Adaptor protein complex, sigma subunitPIRSFPIRSF015588AP_complex_sigmacoord: 1..143
e-value: 1.0E-58
score: 195.4
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753CLATHRIN COAT ASSEMBLY PROTEINcoord: 2..143
NoneNo IPR availableGENE3D3.30.450.60coord: 1..143
e-value: 1.5E-54
score: 185.9
NoneNo IPR availablePANTHERPTHR11753:SF44AP-2 COMPLEX SUBUNIT SIGMAcoord: 2..143
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6650contigE_fasciculatus_S2_contig6650:3525..7477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6650.14747.1mRNA_E_fasciculatus_S2_contig6650.14747.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig6650 3422..7751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig6650.14747.1 ID=prot_E_fasciculatus_S2_contig6650.14747.1|Name=mRNA_E_fasciculatus_S2_contig6650.14747.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=144bp
MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNF
VEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVC
ELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom_sf
IPR016635AP_complex_ssu
IPR022775AP_mu_sigma_su