mRNA_E_fasciculatus_S2_contig9974.17959.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9974.17959.1
Unique NamemRNA_E_fasciculatus_S2_contig9974.17959.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV32_ECTSI)

HSP 1 Score: 659 bits (1699), Expect = 5.240e-226
Identity = 489/660 (74.09%), Postives = 505/660 (76.52%), Query Frame = 1
Query:   19 PWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLASRGSGARWGDGERGSRTFSWISPAGGFGFLGDSDGDCSDQRRXXXXXXXXXXXXXXXXXXXXXX-TNSAGSFASASSFVSSAGEALSDLSELSVGGGGEGPAATGGDTPVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHANASSTLEGRREQEE--------KGVEETEETAPALAISIGGGLQSPRRSPPAGDE-RETGREGAADEESPLLGAPGAPQTPPSAASASSPRAGEVHGTYP----------ANTPAGAPARPAADPNEIDNDNPNSAIPTIIRHLSSSTDNSWHGHARKASSPLVGLSYTHSPLSVRSMSDDAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSHSSGELTYSPNPSAAAPDPEE-EVGPWTNSVSGDARAPSEALFREEGGDRRGYNNN--ARGQGGQESAAGFFSLEGDSEAALPEGEAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PSPRREGQRRQQHLLPLEKSLP 1920
            PWVGSCVAVRNYRYFFAFVGST +LIFFMMAA+L RLVLRVLVDGDGSVES+LEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLASRGSG RWGDGERGSRTFSWISPAGGFGFLGDSDGDCSDQRR XXXXXXX               TNSAGSFASASSFVSSAGEALSDLSELSVG                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          KGVEE    AP LAIS GG LQ    SPPAGDE RE GREGAADEESPLLGAP  P+TPPS ASASSPRAG+VHGT P          ++  AGAPA+PAADPNEIDNDNPNS IPTI+RHLS+STDNSWHG A+K SSPLVGLSYTHSPLSVRSMSDDAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D SHSSGELTYSPNPSA        EV PWT S SGDARAPS ALF EE            ARGQGGQE+AAGFF LEG S+A LPEGEAAA  XXXXXXX                         PSPRR+GQ+RQ HLLPLEK+LP
Sbjct:  194 PWVGSCVAVRNYRYFFAFVGSTALLIFFMMAAVLARLVLRVLVDGDGSVESILEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLASRGSGTRWGDGERGSRTFSWISPAGGFGFLGDSDGDCSDQRRQXXXXXXXGRPPRVLSAGGSSRRTNSAGSFASASSFVSSAGEALSDLSELSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGVEEA---APTLAISTGGELQF--SSPPAGDEKREAGREGAADEESPLLGAPEPPRTPPSTASASSPRAGDVHGTSPTXXXXXXXXASDALAGAPAQPAADPNEIDNDNPNSTIPTIVRHLSNSTDNSWHGQAKKVSSPLVGLSYTHSPLSVRSMSDDAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---DGSHSSGELTYSPNPSAXXXXXXXXEVVPWTKSSSGDARAPSAALFSEEXXXXXXXXXXXXARGQGGQEAAAGFFPLEGGSDAVLPEGEAAAAVXXXXXXXMGAAGNRGRDSGRRSDFRAGSTSGSPSPRRDGQQRQ-HLLPLEKTLP 844          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J901_9PHAE)

HSP 1 Score: 517 bits (1331), Expect = 4.750e-172
Identity = 397/638 (62.23%), Postives = 412/638 (64.58%), Query Frame = 1
Query:   19 PWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLASRGSGARWGDGERGSRTFSWISPAGGFGFLGDSDGDCSDQRRXXXXXXXXXXXXXXXXXXXXXXTNSAGSFASASSFVSSAGEALSDLSELSVGGGGEGPAATGGDTPVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHANASSTLEGRREQEEKGVEETEETAPALAISIGGGLQSPRRSPPAGDERETGREGAADEESPLLGAPGAPQTPPSAASASSPRAGEVHGTYPANTPAGAPARPAADPNEIDNDNPNSAIPTIIRHLSSSTDNSWHGHARKASSPLVGLSYTHSPLSVRSMSDDAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSHSSGELTYSPNPSAAAPDPEEE-VGPWTNSVSGDARAPSEALFREEGGDRRGYNNNARGQGGQESAAGFFSLEGDSEAALPEGEAAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP---SPRREGQRRQQHLLPLEKSLP 1920
            PWVGSCVAVRNYRYFFAFVGSTV+LIFFMMAA+L RLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVY NEPLASRGSG RWGDGERGSRTFSWISPAGGFGFLGDSDGDCSDQR+  XXXXX               TNSAGSFASASSFVSSAGEALSD                                         XXXXXXXXXX     A+ NASST EGRRE+EE+G+EE    APAL IS GG LQS RRSPPAGDERE GR  AADEESPLLGA    +TPPSAAS                                                                                                            XXXXXXXXXXXXXXXX D SHSSGELTYSPNPSAA PDPEEE + PW  S SG              GDR  YNNNARGQGGQE+AAGFF L+G S+A LPEGE AA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SPRR+GQ+RQ HLLPLEK+LP
Sbjct:  265 PWVGSCVAVRNYRYFFAFVGSTVLLIFFMMAAVLARLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYANEPLASRGSGTRWGDGERGSRTFSWISPAGGFGFLGDSDGDCSDQRQQHXXXXXGRPPRVLSAGGSSRRTNSAGSFASASSFVSSAGEALSDXXXX-------------------------------------XXXXXXXXXXDGEEGANVNASSTPEGRREEEEEGMEEA---APALEISTGGELQSSRRSPPAGDEREAGRGEAADEESPLLGAS---RTPPSAAS------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXRDGSHSSGELTYSPNPSAAVPDPEEEEIVPWAKSSSG--------------GDRGSYNNNARGQGGQEAAAGFFPLDGGSDAVLPEGEVAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPRRDGQQRQ-HLLPLEKTLP 736          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV38_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.320e-18
Identity = 61/158 (38.61%), Postives = 86/158 (54.43%), Query Frame = 1
Query:    1 RFDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLV-DGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLASRGSGAR 471
            RFDHHCPWVG+C+ +RNY YFFAFV + +VL    +A     L   V V D D  ++++ + +A+ P    +  ++ L+   LL LW YHL+ +L  GQTTNE +R ++    N    GC  N   +     P S LP L E V    P A+ G  +R
Sbjct:  115 RFDHHCPWVGNCIGIRNYIYFFAFVTTILVLCTLELAVSAYVLFAEVAVADNDIFLDALADGMAARPGAAAVFIVSFLLLWCLLSLWLYHLR-LLSIGQTTNEAVRGIFDFRDNPNDHGCMNNIKHVFMTKVPPSVLPPLEELVVPCTPGAAPGRSSR 271          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: Palmitoyltransferase (n=3 Tax=Lotharella TaxID=74819 RepID=A0A7S2TN97_9EUKA)

HSP 1 Score: 93.2 bits (230), Expect = 5.130e-17
Identity = 49/152 (32.24%), Postives = 82/152 (53.95%), Query Frame = 1
Query:    1 RFDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLV-LRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLAS 453
            RFDHHCPWVG+C+  RNY+YF  F+ S  +L  +++      L   +     +G++  +++ + +     +M A  +LV + +  L  YH Q I+   QTTNE M+  + +  N Y KGC QN  ++LC   P S L   +  ++ ++ + S
Sbjct:  151 RFDHHCPWVGTCIGARNYKYFILFLFSITILSAYLIGVNAWLLFKAKEASQEEGNLNQIMDALRNNWCSTMMGAYTILVFMAVANLAVYHCQLII-NNQTTNEQMKETWASRRNPYDKGCVQNCCNILCTKVPESHLTCRTAMLHDDDDVES 301          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8Q1_9CRUS)

HSP 1 Score: 90.9 bits (224), Expect = 1.970e-16
Identity = 55/138 (39.86%), Postives = 76/138 (55.07%), Query Frame = 1
Query:    1 RFDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVL-VDGDGS-VESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRL 408
            +FDHHCPWVG+CV +RNYR+F  FV S  +   F+ A  +  LVL     D DG  +    + + S P  L +      V + +L L  YH+  IL +GQTTNE+MR V+R  HN    G  +N  S  C+  P S++
Sbjct:  142 QFDHHCPWVGTCVGLRNYRFFVYFVFSVCLTSGFVFATSVAVLVLNTTNSDADGHWINRFADAITSNPASLALVIFTAFVFLSVLGLASYHVNLIL-QGQTTNENMRQVFRRVHNPNDHGYKKNCDSTFCSRIPISQI 278          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: S-acyltransferase ((Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SQ93_SELML)

HSP 1 Score: 86.7 bits (213), Expect = 6.670e-15
Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 1
Query:    1 RFDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRS 402
            RFDHHCPWVG C+ +RNYRYFF FV ST +L  ++    +  L +++L+       +V   +   P  +L+ A   +    +  L ++HL  ++   QTT E+ R  Y N  N Y++G + N   +LC+P P+S
Sbjct:  163 RFDHHCPWVGQCIGLRNYRYFFMFVSSTTLLCIYVFG--ICALYIKLLMHDHSY--TVWRAMGKSPPSVLLMAYTFIAVWFVGGLTFFHLY-LMSTNQTTYENFRYRYDNKVNPYNRGVFHNLYEILCSPVPKS 291          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A653_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.640e-14
Identity = 55/155 (35.48%), Postives = 82/155 (52.90%), Query Frame = 1
Query:    4 FDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLASRGSGA 468
            FDHHCPW+G+CVA RNY YF  F+   V+LI +++     R+VL        +    +E V + P  L   A+A  +  P++ L  +HL+ +    QTTNE +R VYR+  NS  KGC +N  + + A    +  P   E ++   P A +  GA
Sbjct:  259 FDHHCPWLGTCVAKRNYAYFALFLNCEVLLIVYVVCITTFRMVLAFKASELPATAFEIEEVQTAPWPLGAAAVAAGLAFPVVSLLCFHLR-LAAISQTTNESVRGVYRHAINSNDKGCRRNCYNSIYATLREATPPSRLEPLFAR-PCADQSWGA 411          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: S-acyltransferase ((Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CMI4_9LAMI)

HSP 1 Score: 86.3 bits (212), Expect = 2.770e-14
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = 1
Query:    1 RFDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWW------YHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSR 405
            RFDHHCPWVG C+ +RNYRYFF FV ST VL  ++       + +R ++D DG+  S+ + +   P      A  +L+    + +W+      +HL  ++   QTT E+ R  Y    N Y++G   N   +LC P PRS+
Sbjct:  177 RFDHHCPWVGQCIGLRNYRYFFMFVSSTTVLCVYVFG--FCWVYIRKVMDADGT--SIWKAMIRSP------AAIVLIIYTFISVWFVGGLTGFHLY-LIGTNQTTYENFRYRYDRRANPYNRGVLDNFKEILCGPTPRSK 306          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: S-acyltransferase (n=8 Tax=Saliceae TaxID=238069 RepID=A0A2K1ZQW0_POPTR)

HSP 1 Score: 84.7 bits (208), Expect = 4.810e-14
Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = 1
Query:    1 RFDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWW------YHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLASR 456
            RFDHHCPWVG C+ +RNYRYFF FV S+ +L  F+ +  ++ L ++ L+D  GS    ++     P  +++   + +       LW+      +HL  ++ + QTT E+ R    N HN Y +GC +N + + C     SR    + + YV E +  R
Sbjct:  163 RFDHHCPWVGQCIGLRNYRYFFLFVSSSALLCIFIFS--MSALNVKFLMDDYGSPWKAMK---ESPASVILIVYSFIF------LWFVGGLTCFHLY-LIGRNQTTYENFRYGAANRHNVYDQGCLRNFLEVFCTKTNPSRN---NFQAYVQEEMPMR 305          
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Match: S-acyltransferase (n=3 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UWP3_MANES)

HSP 1 Score: 84.3 bits (207), Expect = 6.600e-14
Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1
Query:    1 RFDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLVDGDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWW------YHLQTILCKGQTTNEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSR 405
            RFDHHCPWVG C+ +RNYRYFF FV S+ +L  F+ A  ++ + +++L+D  G++   ++     P      A  +L+G     LW+      +HL  ++ + QTT E+ R   RN  N Y++GC  N + + C     SR
Sbjct:  162 RFDHHCPWVGQCIGLRNYRYFFLFVSSSALLCIFVFA--MSAVNIKLLMDDHGTIWKAMK---ESP------ASVILMGYCFFFLWFVGGLTCFHLY-LIGRNQTTYENFRYGARNGPNVYNQGCLNNFLEVFCTKMKPSR 290          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9974.17959.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Palmitoyltransferase5.240e-22674.09n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Palmitoyltransferase4.750e-17262.23n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 R... [more]
Palmitoyltransferase3.320e-1838.61n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1... [more]
Palmitoyltransferase5.130e-1732.24n=3 Tax=Lotharella TaxID=74819 RepID=A0A7S2TN97_9E... [more]
Palmitoyltransferase1.970e-1639.86n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6... [more]
S-acyltransferase6.670e-1535.82(Fragment) n=3 Tax=Selaginella moellendorffii TaxI... [more]
Palmitoyltransferase1.640e-1435.48n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A... [more]
S-acyltransferase2.770e-1436.17(Fragment) n=1 Tax=Genlisea aurea TaxID=192259 Rep... [more]
S-acyltransferase4.810e-1432.91n=8 Tax=Saliceae TaxID=238069 RepID=A0A2K1ZQW0_POP... [more]
S-acyltransferase6.600e-1435.46n=3 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UWP3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9974contigE_fasciculatus_S2_contig9974:2503..5491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score674.5
Seed ortholog evalue5e-191
Seed eggNOG ortholog2880.D7FV32
Model size1923
KEGG rclassRC00741,RC01491,RC01492,RC03042
KEGG koko:K04035,ko:K16675,ko:K18932,ko:K20027,ko:K20030,ko:K20471
KEGG ReactionR06265,R06266,R06267,R10068
KEGG Pathwayko00860,ko01100,ko01110,ko04391,map00860,map01100,map01110,map04391
Hectar predicted targeting categorysignal anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0005886,GO:0007275,GO:0008150,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0010054,GO:0012505,GO:0016020,GO:0016049,GO:0021700,GO:0022622,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0030154,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0035618,GO:0040007,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0048364,GO:0048468,GO:0048469,GO:0048588,GO:0048589,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0060560,GO:0071695,GO:0071944,GO:0080147,GO:0090558,GO:0090627,GO:0097708,GO:0099402,GO:0120025,GO:1905392
Exons3
EggNOG free text desc.protein-cysteine S-palmitoyltransferase activity
EggNOG OGsCOG5273@1,KOG1311@2759
Ec32 ortholog descriptionZinc finger, DHHC-type, palmitoyltransferase
Ec32 orthologEc-12_004980.1
EC1.14.13.81,2.3.1.225
Cds size1923
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842638.3613956-CDS-E_fasciculatus_S2_contig9974:2502..41091696842638.3613956-CDS-E_fasciculatus_S2_contig9974:2502..4109Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9974 2503..4109 -
1696842638.3749256-CDS-E_fasciculatus_S2_contig9974:4431..45541696842638.3749256-CDS-E_fasciculatus_S2_contig9974:4431..4554Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9974 4432..4554 -
1696842638.3861969-CDS-E_fasciculatus_S2_contig9974:5298..54911696842638.3861969-CDS-E_fasciculatus_S2_contig9974:5298..5491Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9974 5299..5491 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9974.17959.1prot_E_fasciculatus_S2_contig9974.17959.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9974 2503..5491 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9974.17959.1

>prot_E_fasciculatus_S2_contig9974.17959.1 ID=prot_E_fasciculatus_S2_contig9974.17959.1|Name=mRNA_E_fasciculatus_S2_contig9974.17959.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=641bp
RFDHHCPWVGSCVAVRNYRYFFAFVGSTVVLIFFMMAAMLTRLVLRVLVD
GDGSVESVLEVVASGPVDLLMTAMALLVGIPLLRLWWYHLQTILCKGQTT
NEDMRAVYRNHHNSYHKGCWQNSVSLLCAPAPRSRLPDLSERVYVNEPLA
SRGSGARWGDGERGSRTFSWISPAGGFGFLGDSDGDCSDQRRQHQQQQGR
PPPRVLSAGGSSRRTNSAGSFASASSFVSSAGEALSDLSELSVGGGGEGP
AATGGDTPVEAVVTAAAPEDMQDGGGGGGEGGGDDGRDGGEEDAHANASS
TLEGRREQEEKGVEETEETAPALAISIGGGLQSPRRSPPAGDERETGREG
AADEESPLLGAPGAPQTPPSAASASSPRAGEVHGTYPANTPAGAPARPAA
DPNEIDNDNPNSAIPTIIRHLSSSTDNSWHGHARKASSPLVGLSYTHSPL
SVRSMSDDAGSGGGGGGGGRRGSARASATATAAAAAAVAAAAAAAAARDS
SHSSGELTYSPNPSAAAPDPEEEVGPWTNSVSGDARAPSEALFREEGGDR
RGYNNNARGQGGQESAAGFFSLEGDSEAALPEGEAAAVAAAAMGAAGNSR
GRDSGRRSDFRAGSTSGSPSPRREGQRRQQHLLPLEKSLP*
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mRNA from alignment at E_fasciculatus_S2_contig9974:2503..5491-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9974.17959.1 ID=mRNA_E_fasciculatus_S2_contig9974.17959.1|Name=mRNA_E_fasciculatus_S2_contig9974.17959.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2989bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9974:2503..5491- (Ectocarpus fasciculatus EfasUO2)
AGGTTCGATCATCATTGCCCATGGGTCGGCAGCTGCGTGGCGGTCCGGAA CTACCGCTACTTCTTCGCCTTCGTGGGGTCGACGGTGGTGCTAATCTTTT TCATGATGGCGGCGATGCTGACGAGGCTGGTACTGAGGGTGCTTGTGGAC GGCGACGGGTCCGTTGAGAGCGTCTTGGAGGTGGTTGCGTCGGGTAAGAC AATGTTTTAGAAAATTTTAGAAAAACGGCTACTGCTGTACGTACAAAGTT GTACCCGAGTATTGGGGCAGGGTCCATGGGCATGTTCTGCAAAGGTTACC CGACCCTGCCGGGTGGTGGTCTCTATCAAAGTTACCCAAGGGTGTGGGGA CGTCCTACGAAAGCTCTCCGAGTGTCGGCTAGGGTACAGGATGTCGTGCC AATGTTAACAAAGGGTCGGATGCGGGTAGTACCCGAGGGCAATACCCGGA TACCCGGATAGATATGGAATACCCTACCAACCCCTGGCAAGGATGCATGC ACACCGCGTACGGCAATGAATGCGATGAGATATGAGGCGCAATGCGGTGT GCTTGGCAGTACTGTATGGCTTGCATGACCTTATGTAGCCGTACCGTAAG ACGGCGCAGTCCAAAAGAGTGCGAGCAGAGAGAGAGAGATGCGTGCAAGC ACGCGTTAAATGGAGGCGGTGATGACAAGGGCATTGTTTTTGTGGTGTTG TTTTGGCGGCAAACGAGCCATCTTGCAGTATTGCCCCAAGTCCCTCTGGT GCTATGCGCTCGGCTTGGGGCATCTAGGGGTCTAAACCGCACCTTTCATC ATGGTCCATTTTTGTTTTTTCTGAACCCAACTGGCGGCGGAGCAAAACAT GCGTTGATGAAAAAAGAGTTTCGATTTACGCGCGTCGCTCTTTCACGTTT CTCCGGCCCATGCGTGGGTGTTCTCGGAACGACGCAGGCCCTGTGGATCT GCTCATGACGGCGATGGCGCTGCTGGTGGGGATCCCGCTGCTGCGACTTT GGTGGTATCACCTCCAGACTATCCTTTGCAAGGGGCAGACCACAAACGAG GACATGCGAGGTAAGGTACAGAAGCAGAAGCAGTAGAATCGTCTCAAGCT GGTTCGATTGCCGTGTGGTACGCTCTTTGTGTCTCTCTGAACTACTCTGT GTGTGTGTGTTGTGCTCAGCACCGGAGAATCACGTACGAAAAGTACGGCA TTTGAACGAATCACTGCTTGTGAGTGAGGGCCGTGAGTAGGTGCTGTACG CTTGCCCAACTTCTGGCATTCTCATCAAACCGCCCTTCACCCCACTCATG ACCGTTCTTCTTCTTCCACCCCCCTCAAACCAACCCGAAAACCTTCGCTC GCCCTACCCTACACCTCCGCCCCGCTCCCCAGCCGTGTACCGAAATCACC ACAACAGCTACCACAAGGGCTGCTGGCAAAACTCGGTCTCCCTGCTGTGC GCCCCCGCGCCCCGCTCCCGCCTACCGGACCTATCGGAACGGGTGTACGT GAACGAGCCGCTAGCAAGCCGCGGGAGCGGCGCCCGCTGGGGCGACGGGG AGCGGGGGTCTCGGACGTTCTCGTGGATTTCTCCCGCCGGCGGGTTCGGA TTCCTGGGAGATTCTGACGGGGATTGCTCCGACCAGCGGCGGCAGCACCA GCAGCAGCAGGGCAGGCCGCCGCCACGGGTTCTGTCGGCGGGGGGGAGCA GCCGGCGGACGAACAGCGCGGGGTCGTTCGCGAGCGCGAGTTCCTTCGTC AGCTCCGCGGGGGAGGCGTTGTCGGACTTGTCCGAGTTGTCGGTGGGCGG GGGCGGGGAAGGGCCGGCGGCGACGGGGGGGGACACCCCGGTGGAGGCGG TGGTGACGGCGGCGGCGCCGGAAGACATGCAGGATGGTGGCGGTGGTGGT GGTGAAGGTGGTGGTGATGATGGCCGTGACGGCGGTGAAGAAGATGCACA CGCGAACGCGTCGTCAACGTTAGAGGGGCGGCGGGAGCAAGAAGAGAAAG GGGTAGAAGAAACGGAAGAAACGGCGCCAGCGTTGGCGATTAGCATCGGG GGGGGGTTGCAATCCCCTCGAAGAAGTCCTCCTGCGGGTGATGAACGGGA GACAGGGAGAGAAGGGGCAGCTGACGAGGAGTCGCCACTGCTGGGAGCGC CGGGAGCACCCCAAACACCGCCTTCGGCAGCCTCCGCATCCTCACCGCGT GCAGGGGAAGTGCACGGTACTTATCCTGCCAACACGCCAGCCGGTGCGCC AGCGCGGCCGGCCGCGGACCCGAACGAGATTGACAACGACAATCCTAATA GCGCGATTCCGACGATAATACGCCACCTCAGCAGCAGCACCGACAACTCG TGGCACGGCCACGCCAGGAAGGCGTCTAGCCCGTTGGTCGGGCTGTCGTA CACCCACAGCCCGCTCTCGGTACGGTCCATGTCCGACGATGCGGGCAGTG GCGGCGGCGGCGGCGGTGGCGGCCGTAGAGGTAGCGCGAGGGCTTCGGCG ACCGCGACAGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCAGC GGCGGCCAGGGACAGCAGCCACTCGTCGGGCGAGCTTACGTACTCGCCGA ACCCGTCCGCTGCGGCGCCCGACCCCGAGGAGGAGGTTGGCCCTTGGACC AACAGCGTTAGCGGCGACGCAAGAGCACCGTCGGAAGCTCTTTTCCGCGA GGAGGGCGGCGACCGGCGGGGTTACAACAACAACGCTCGGGGCCAGGGTG GGCAAGAGTCGGCGGCAGGGTTCTTTTCGTTGGAGGGGGACAGCGAGGCG GCGTTGCCGGAGGGCGAGGCGGCAGCGGTGGCGGCGGCGGCGATGGGCGC GGCGGGTAACAGCAGGGGCAGAGATTCCGGGCGAAGGAGCGATTTCAGAG CCGGCAGCACCAGCGGCAGTCCATCGCCACGACGGGAAGGGCAGCGGAGG CAGCAGCATTTGTTGCCTCTAGAGAAGTCCCTGCCGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9974:2503..5491-

>mRNA_E_fasciculatus_S2_contig9974.17959.1 ID=mRNA_E_fasciculatus_S2_contig9974.17959.1|Name=mRNA_E_fasciculatus_S2_contig9974.17959.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1923bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9974:2503..5491- (Ectocarpus fasciculatus EfasUO2)
AGGTTCGATCATCATTGCCCATGGGTCGGCAGCTGCGTGGCGGTCCGGAA
CTACCGCTACTTCTTCGCCTTCGTGGGGTCGACGGTGGTGCTAATCTTTT
TCATGATGGCGGCGATGCTGACGAGGCTGGTACTGAGGGTGCTTGTGGAC
GGCGACGGGTCCGTTGAGAGCGTCTTGGAGGTGGTTGCGTCGGGCCCTGT
GGATCTGCTCATGACGGCGATGGCGCTGCTGGTGGGGATCCCGCTGCTGC
GACTTTGGTGGTATCACCTCCAGACTATCCTTTGCAAGGGGCAGACCACA
AACGAGGACATGCGAGCCGTGTACCGAAATCACCACAACAGCTACCACAA
GGGCTGCTGGCAAAACTCGGTCTCCCTGCTGTGCGCCCCCGCGCCCCGCT
CCCGCCTACCGGACCTATCGGAACGGGTGTACGTGAACGAGCCGCTAGCA
AGCCGCGGGAGCGGCGCCCGCTGGGGCGACGGGGAGCGGGGGTCTCGGAC
GTTCTCGTGGATTTCTCCCGCCGGCGGGTTCGGATTCCTGGGAGATTCTG
ACGGGGATTGCTCCGACCAGCGGCGGCAGCACCAGCAGCAGCAGGGCAGG
CCGCCGCCACGGGTTCTGTCGGCGGGGGGGAGCAGCCGGCGGACGAACAG
CGCGGGGTCGTTCGCGAGCGCGAGTTCCTTCGTCAGCTCCGCGGGGGAGG
CGTTGTCGGACTTGTCCGAGTTGTCGGTGGGCGGGGGCGGGGAAGGGCCG
GCGGCGACGGGGGGGGACACCCCGGTGGAGGCGGTGGTGACGGCGGCGGC
GCCGGAAGACATGCAGGATGGTGGCGGTGGTGGTGGTGAAGGTGGTGGTG
ATGATGGCCGTGACGGCGGTGAAGAAGATGCACACGCGAACGCGTCGTCA
ACGTTAGAGGGGCGGCGGGAGCAAGAAGAGAAAGGGGTAGAAGAAACGGA
AGAAACGGCGCCAGCGTTGGCGATTAGCATCGGGGGGGGGTTGCAATCCC
CTCGAAGAAGTCCTCCTGCGGGTGATGAACGGGAGACAGGGAGAGAAGGG
GCAGCTGACGAGGAGTCGCCACTGCTGGGAGCGCCGGGAGCACCCCAAAC
ACCGCCTTCGGCAGCCTCCGCATCCTCACCGCGTGCAGGGGAAGTGCACG
GTACTTATCCTGCCAACACGCCAGCCGGTGCGCCAGCGCGGCCGGCCGCG
GACCCGAACGAGATTGACAACGACAATCCTAATAGCGCGATTCCGACGAT
AATACGCCACCTCAGCAGCAGCACCGACAACTCGTGGCACGGCCACGCCA
GGAAGGCGTCTAGCCCGTTGGTCGGGCTGTCGTACACCCACAGCCCGCTC
TCGGTACGGTCCATGTCCGACGATGCGGGCAGTGGCGGCGGCGGCGGCGG
TGGCGGCCGTAGAGGTAGCGCGAGGGCTTCGGCGACCGCGACAGCGGCGG
CGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCAGCGGCGGCCAGGGACAGC
AGCCACTCGTCGGGCGAGCTTACGTACTCGCCGAACCCGTCCGCTGCGGC
GCCCGACCCCGAGGAGGAGGTTGGCCCTTGGACCAACAGCGTTAGCGGCG
ACGCAAGAGCACCGTCGGAAGCTCTTTTCCGCGAGGAGGGCGGCGACCGG
CGGGGTTACAACAACAACGCTCGGGGCCAGGGTGGGCAAGAGTCGGCGGC
AGGGTTCTTTTCGTTGGAGGGGGACAGCGAGGCGGCGTTGCCGGAGGGCG
AGGCGGCAGCGGTGGCGGCGGCGGCGATGGGCGCGGCGGGTAACAGCAGG
GGCAGAGATTCCGGGCGAAGGAGCGATTTCAGAGCCGGCAGCACCAGCGG
CAGTCCATCGCCACGACGGGAAGGGCAGCGGAGGCAGCAGCATTTGTTGC
CTCTAGAGAAGTCCCTGCCGTGA
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