mRNA_E_fasciculatus_S2_contig992.17914.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE) HSP 1 Score: 619 bits (1595), Expect = 9.540e-219 Identity = 310/354 (87.57%), Postives = 322/354 (90.96%), Query Frame = 1
Query: 40 ADQRPAGVEKGSTRDYDGEPKTPRTSSGGLAGHLNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQTRKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYLMDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQGDLVDFQELQDNVCTYLEENSSSAAREMYRSMDAVYTDPPPTYPF 1101
A+Q AGV++G TRD DGEP TPRTSSG LAGHLNDLVEASA DA NQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFG GKGTIANLKKAATQTRKSGE VDVMHYHISHSGEY TWPQAENYFRRIMR+PDSIN+VTVLREPRSHLLSCYYFYIFPECELSIE+YLMDPAHAGDEN+ RLRNPLSAEFGVKT +EMN FI NHLP FKLVMLTERMDESL +LR LLGWHMIDVTYASLN TRAGARRYDGKPL DRPDFC LS+EVQARIDELTILDQALYDAGKKEFEKRL+S STS Q +L FQELQDNVCTYLE NSS AREMYRSMDAVYTDPPP Y F
Sbjct: 6 AEQGLAGVDEGRTRDCDGEPSTPRTSSGELAGHLNDLVEASARDADNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGKGKGTIANLKKAATQTRKSGELVDVMHYHISHSGEYTGTWPQAENYFRRIMRHPDSINYVTVLREPRSHLLSCYYFYIFPECELSIEDYLMDPAHAGDENRHRLRNPLSAEFGVKTAKEMNTFIVNHLPDFKLVMLTERMDESLVLLRSLLGWHMIDVTYASLNATRAGARRYDGKPLIDRPDFCHLSEEVQARIDELTILDQALYDAGKKEFEKRLSSTSTSFQAELAGFQELQDNVCTYLEGNSSGLAREMYRSMDAVYTDPPPAYHF 359
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE) HSP 1 Score: 335 bits (860), Expect = 1.080e-107 Identity = 176/325 (54.15%), Postives = 232/325 (71.38%), Query Frame = 1
Query: 103 TPRTSSGGLA-----GHLNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQTRKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYLMDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQGDLVDFQELQDNVCTYLEENSSSAAREMYRSM 1062
TPR ++G + G+LN LVEA+ D GNQV NV FVKTHKT STT+A++ YRYA RH LKL++FG ++ +L+ AA +T+++G+ VD+MHYHIS G+Y TW +A ++R IMR PD INFVTVLREPRSHLLS YY+++ P + SIEE+L+ H + R L NPLSAEFGV+T EM++FI + LP FKLV++ R+DE L L R+L WHMID+TY LNET+ G+RR+DGK + P F L K+VQ +ID+LT LD+ LY+AGK EFEKRL ++S+Q D+ FQELQ + YL NSSS A +MY +M
Sbjct: 17 TPRKTAGDVGPQSRRGYLNQLVEATTLDHGNQVTNVAFVKTHKTASTTVASIMYRYAARHHLKLSYFG--GSSVTDLRSAANETKENGQRVDLMHYHISPRGQYMGTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQPLHQQSIEEFLLS-GHRNNIEHRMLSNPLSAEFGVRTAEEMDSFISSALPDFKLVLM--RLDEGLLTLGRMLHWHMIDLTYCDLNETKEGSRRWDGKTVVTWPQFDSLPKQVQNKIDDLTRLDRVLYEAGKDEFEKRLAPYASSVQEDIPQFQELQGVIKDYLNGNSSSLAYQMYLNM 336
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI) HSP 1 Score: 287 bits (735), Expect = 3.420e-88 Identity = 158/327 (48.32%), Postives = 214/327 (65.44%), Query Frame = 1
Query: 136 HLNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQT--RKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYLMDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSI-QGDLVDFQELQDNVCTYLEENSSSAAREMYRSMDAVYT--DPPPTYPF 1101
+LN+LV SA Q++N+ F+KTHKT STT A + YRYA RH +KLAHF I L++A QT R+ D+MHYH+S G+++ +W QAE +RRI+R ++NFVTV+REPRSHLLS YY+++ P+ + +I E+L H D RRL NPLSAEFGVK +++ +E LP K+V+LTE DE L +LRRLL W M+D+TY S+ +T AGARRYDGKPL + P F DL +VQ ID+ T LD+ LY+A K E+EKR + + + DLV+F ELQ V YL +N +S A MY++ + +Y D P Y F
Sbjct: 83 YLNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHFDDHNSAIP-LREAVQQTEGRQGKGRCDIMHYHVSAFGQFEGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQTQKTIGEFLTQAKHPRDPIHRRLFNPLSAEFGVKKRQDLRYVLEKALPNAKMVLLTEEFDEGLMVLRRLLRWEMVDMTYVSVYKTTAGARRYDGKPLVNAPRFEDLPVQVQQIIDQHTELDRVLYNAAKLEYEKRRDLIPPPLLEEDLVEFHELQRTVGAYLVDNPTSKANAMYKTAN-IYAQEDASPFYEF 407
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: Sulfotransferase (n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDJ0_SACJA) HSP 1 Score: 268 bits (686), Expect = 1.030e-80 Identity = 147/323 (45.51%), Postives = 207/323 (64.09%), Query Frame = 1
Query: 136 HLNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQTRKS-GEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYLMDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQGDLVDFQELQDNVCTYLEENSSSAAREMYRSMDAVYTDPPPTYPF 1101
+LN LVEAS +Q N+ F T++TGST++A + YRYAVRH LKLA +G+ + + K ATQ ++ E VD+MHYHIS+ G K WP A +R IMR PD++N +T++REPR H +S YY+++ P +LS+E++LM +H GD+ L+NPL++E GV T M N F++++LT+R DE L +LRRLLGW MID+TY +++ET+AG + DRP F DL ++V+ +ID LT LDQ +Y A + ++KRL MS I D+ +FQ+LQ V YL+ N SS A MYR+ D VY PP F
Sbjct: 111 YLNGLVEASVATTDHQEGNIAFANTYQTGSTSMAGILYRYAVRHNLKLAR--VGQESAVDPKWFATQVQQGKSERVDIMHYHISNKGHLKGLWPGARENYRGIMREPDNVNLLTMMREPREHFISYYYYFVEPATKLSLEDFLMK-SHGGDDFAL-LKNPLASEVGVTTFHNMEQLFVNDFSSFRMILLTDRFDEGLMVLRRLLGWSMIDMTYMAMDETKAG-----DIAVVDRPSFHDLPEKVRNKIDSLTELDQMVYSAAQVLYDKRLRPMSDVIGADVEEFQKLQKVVSGYLDANQSSKANAMYRAED-VYIGAPPMNQF 423
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: Sulfotransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI) HSP 1 Score: 263 bits (671), Expect = 1.530e-79 Identity = 144/326 (44.17%), Postives = 192/326 (58.90%), Query Frame = 1
Query: 136 HLNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQTRKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYL----MDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQGDLVDFQELQDNVCTYLEENSSSAAREMYRSMDAVYTDPPPTYPF 1101
+LN LVE +A G Q N+ F KTHKT STT+A + RYA RH +KLA FG + L +A Q +SGE VDVMHYH + G + W +A+ + +IMR + IN++TV+R RSH LS YY+Y+ PE +LS++ + DP +RRL NPL AEFG+ ++ FIE LP F+LV+LTE DE L ++RR+LGW MID+TY+ + ET+AG R+DGK L + P + DL VQ R+D T LD+ LYDA + K + I+ DL +F ELQ V YL NSSS A Y Y +PF
Sbjct: 19 YLNGLVEETAEATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTAYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNRQDPQF--QYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGARWDGKELKNVPHWEDLPTWVQDRVDANTALDKMLYDAAVSHYNKMKAVAAMEIEDDLKEFDELQKTVNGYLALNSSSEAIRWYSGSAQPYLGGEQFHPF 342
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: ST (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE) HSP 1 Score: 260 bits (664), Expect = 3.350e-76 Identity = 143/326 (43.87%), Postives = 193/326 (59.20%), Query Frame = 1
Query: 136 HLNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQTRKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYL----MDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQGDLVDFQELQDNVCTYLEENSSSAAREMYRSMDAVYTDPPPTYPF 1101
+LN LVE +A G Q N+ F KTHKT STT+A + RYA RH +KLA FG + L +A Q +SGE VDVMHYH + G + W +A+ + +IMR + IN++TV+R RSH LS YY+Y+ PE +LS++ + DP +RRL NPL AEFG+ ++ FIE LP F+LV+LTE DE L ++RR+LGW MID+TY+ + ET+AG R+DGK L + P + DL VQ R+D T LD+ LYDA + + + + I+ DL F+ELQ V YL NSSS A Y Y +PF
Sbjct: 208 YLNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSAIPLTEAVQQIEESGERVDVMHYHYTTYGSFDGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNREDPQF--QYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSRMMETKAGGTRWDGKELKNVPRWEDLPTWVQDRVDANTALDKMLYDAAVRHYNQMKAVAAIEIEDDLKQFEELQKVVNGYLALNSSSEAIRWYSGSAQPYLGGEQFHPF 531
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW5_9PHAE) HSP 1 Score: 257 bits (656), Expect = 7.200e-76 Identity = 152/347 (43.80%), Postives = 208/347 (59.94%), Query Frame = 1
Query: 70 GSTRDYDGEPKTPRTSSGGLAGHLNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQT--RKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYLMDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQGDLVDFQELQDNVCTYLEENSSSAAREMYRSMDAVY-TDPPPTYPF 1101
G T D G P T + G +LN LV ASA + Q++N+ KTHKTGSTTLA + +RY RH L++AHF G G+ +++AA QT G+ VD+MHYHI + W A+ ++R +MRYPD INF+T+LR+PR LLS Y F++ E + I+E+ A +E RLR+ EFGV T E+ FI+ +P FKLV++TER DESL ++R LLGW ++D+TY S+N R+ R+ +R F L ++VQ +IDELT LD+ LYDAG FE+ L + + DL F+ELQ V YL +N SS A+ +Y AVY DPPP F
Sbjct: 116 GDTGDLPGSQAIP-TDAAGQRDYLNGLVAASAENKDEQLSNLALFKTHKTGSTTLAILLHRYGRRHDLEVAHFP-GFGSTIPIEEAARQTGLADDGKRVDIMHYHIDTDTPRQERWGSAKEHYRDVMRYPDDINFITILRDPRDWLLSFYSFFVEFETGVPIDEFFRQDA-PDEEVLERLRDLGCKEFGVATETELEDFIDQEIPEFKLVLVTERFDESLMVMRSLLGWDLVDMTYVSVN--RSSGRKGKFGVSKERVPFDHLPEDVQEKIDELTTLDRRLYDAGVAAFEESLAPFTAQVDADLEGFRELQTVVNEYLRDNPSSPAQALYSYKTAVYYEDPPPMLDF 457
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: Sulfotransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H5_ECTSI) HSP 1 Score: 248 bits (633), Expect = 2.610e-74 Identity = 141/318 (44.34%), Postives = 187/318 (58.81%), Query Frame = 1
Query: 148 LVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQTRKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYLMDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQGDLVDFQELQDNVCTYLEENSSSAAREMYRSMDAVYTDPPPTYPF 1101
+V SA G Q+ NV FVKTHKT STTLA +F RYA RH KLA F + L A Q +++G+ VDVMHYH+ H G ++ TW +++IM+ + IN++TV+R PR H LS YY+Y+ P +LSIE+YL + + NP+ EFGV +++ FIE HLP F LV+LTE D L LRRL+GW MID+TY+ + ET+ G R+D KPL D P F L + VQ ID T LD+ L++A + R + + DLV+F+ELQ V YL+ NSSS AR Y Y PP Y F
Sbjct: 1 MVTESAGKTGGQMCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQENGQRVDVMHYHV-HEGVWEGTWEDNTKMYKQIMQEAEPINYITVVRSPREHFLSYYYYYMQPMNKLSIEQYL---ERTKRHPAQHMMNPMCVEFGVHDKDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVRWDNKPLVDVPRFASLPQWVQDTIDATTALDRKLHEAAVLAY--RQAAEVGDAEQDLVEFKELQRIVTAYLQANSSSEARRWYAPNAEPYNGGPPLYAF 312
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: Sulfotransferase (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI) HSP 1 Score: 251 bits (641), Expect = 1.290e-73 Identity = 136/322 (42.24%), Postives = 193/322 (59.94%), Query Frame = 1
Query: 136 HLNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQTRKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYLMDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQGDLVDFQELQDNVCTYLEENSSSAAREMYRSMDAVYTDPPPTYPF 1101
+LN LV SA+ Q++N+ F+KTHKT STTLA++ YRY +RH +A F G GT +L A+ Q K G+ VD+MHYH + +G Y TW QA + +IM +N+VTVLREP +H LS YY+++ P ++ I+EYL+ H ++ L NPL+AEFG++ +MN FI+ +P FK+V+LTER DE LA+L+R+L W ID+TY + +T+ G R+DGKPL + P DL+ E+ + I T LD LY AG + K + FQ +Q + YLE N+SS A + Y +Y D PP F
Sbjct: 146 YLNGLVYDSASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKFDQG-GTYVDLDVASKQVAKQGKRVDIMHYHHAWNGFYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNPINKMPIDEYLLKNPH-----KKLLYNPLAAEFGIEDMAQMNHFIKKQMPKFKMVLLTERFDEGLALLQRMLQWDPIDMTYCKMLQTKKGEMRWDGKPLENVPKISDLAPEILSHIKARTQLDSRLYQAGTLLYRKYKLEFGPGVDEHFQAFQGVQKVMHRYLEMNTSSDALKWYVGDVDIYDDAPPILAF 461
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Match: ST (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG3_9PHAE) HSP 1 Score: 230 bits (586), Expect = 1.640e-66 Identity = 125/277 (45.13%), Postives = 168/277 (60.65%), Query Frame = 1
Query: 139 LNDLVEASATDAGNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFGMGKGTIANLKKAATQTRKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIMRYPDSINFVTVLREPRSHLLSCYYFYIFPECELSIEEYLMDPAHAGDENQRRLRNPLSAEFGVKTTREMNAFIENHLPGFKLVMLTERMDESLAILRRLLGWHMIDVTYASLNETRAGARRYDGKPLTDRPDFCDLSKEVQARIDELTILDQALYDAGKKEFEKRLTSMSTSIQG 969
LN +V SA G Q NV FVKTHKT STTLA +F RYA RH KLA F + L A Q ++SG+ VDVMHYH+ H G ++ TW N +++IM+ + IN++TV+R PR H LS YY+Y+ P +LSIE+YL + + NP+ EFGV +++ FIE HLP F LV+LTE D L LRRL+GW MID+TY+ + ET+ G R+D KPL D P F L + VQ ID T LD+ LY+A + + ++M ++G
Sbjct: 98 LNLMVTESAGKTGGQKCNVAFVKTHKTASTTLAMIFVRYAKRHDKKLASFEGRFVSNVPLAVAVQQVQESGQRVDVMHYHV-HEGVWEGTWEDNTNMYQQIMQDAEPINYITVVRSPREHFLSYYYYYMQPMNKLSIEQYL---ERTKRHPAQHMMNPMCLEFGVHDEDQLDIFIEKHLPSFALVILTEEFDAGLMTLRRLMGWDMIDMTYSVMMETKKGVVRWDNKPLVDVPRFVSLPQWVQDTIDATTALDRKLYEAAVLAYRQESSAMIVPMRG 370 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig992.17914.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig992.17914.1 >prot_E_fasciculatus_S2_contig992.17914.1 ID=prot_E_fasciculatus_S2_contig992.17914.1|Name=mRNA_E_fasciculatus_S2_contig992.17914.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=271bp MGKGTIANLKKAATQTRKSGEFVDVMHYHISHSGEYKSTWPQAENYFRRIback to top mRNA from alignment at E_fasciculatus_S2_contig992:2340..9542- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig992.17914.1 ID=mRNA_E_fasciculatus_S2_contig992.17914.1|Name=mRNA_E_fasciculatus_S2_contig992.17914.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7203bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig992:2340..9542- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig992:2340..9542- >mRNA_E_fasciculatus_S2_contig992.17914.1 ID=mRNA_E_fasciculatus_S2_contig992.17914.1|Name=mRNA_E_fasciculatus_S2_contig992.17914.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=813bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig992:2340..9542- (Ectocarpus fasciculatus EfasUO2)back to top |