mRNA_E_fasciculatus_S2_contig990.17896.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU40_9PHAE) HSP 1 Score: 138 bits (347), Expect = 6.860e-33 Identity = 100/263 (38.02%), Postives = 118/263 (44.87%), Query Frame = 1
Query: 610 AAFGGHVNVMKLLVRHGAGVEDTS---------HNYRRLTALHHAVAGMKLDAIEFLMDAGADVDAGDQDWFPIHFAIKANSPEAVLALARHGADLEQQDLLGRSPLYCAAECFHMEALNALLSAGANPNACSEVCSPLQLVAASENSNS--------------------------------VVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----NINLQDSKGDSPLHLAAVQFSSRLVDLLLRQGAD 1263
AA G + + L++ GA + S HN R LTALHHA AG KLDA+EFL+ +GAD + G W PIHFA +ANSPEAVLAL RHGAD +D LGR PL CAA+ +M EVC PL S ++NS VVKL N+NLQDS+G S LHL AV+FSSRLVDLLLR GAD
Sbjct: 43 AASAGDIPLTMALMKAGASGDAFSSAALGTPATHNSRLLTALHHAAAGTKLDAMEFLVGSGADANGGALKWRPIHFATEANSPEAVLALVRHGADPHAEDSLGRPPLCCAADRGNMXXXXXXXXXXXXXXXXHEVCPPLLFAVLSRSNNSEDMTRALLQHGADVNELDDYEIAINEAVRCGNVVKLLLKAGALVDGHNDFHGLVLAPLHAACNFSLSCDVVKVLLGHGANVNLQDSEGTSALHLTAVRFSSRLVDLLLRHGAD 305
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ8_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 1.910e-14 Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 1
Query: 523 AGADVSLRVENEYDVDYEGLSGDCSALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRLTALHHAVAGMKLDAIEFLMDAGADVDAGDQDWFPIHFAIKANSPEAVLALARHGADLEQQDLLGRSPLYCAAECFHMEALNALLSAGANPN 972
AGAD S R + + + ALD A+F G+V++M+ L++HGA + ++ ++R LTALH A G + +AI+ L+ AGA + P+ RHGADL+ + G +PL+ A + ++EA+ ALL+AGANPN
Sbjct: 256 AGADTSCRAMAYLCEERDSFA----ALDIASFYGNVSMMETLLKHGA--DPSTRSWRNLTALHKAAEGNEAEAIDVLIKAGAVISGPAGFDSPVXXXXXXXXXXXXXXXXRHGADLDWHEEAGTTPLFRAVQWRYLEAVKALLAAGANPN 399
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F3_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 1.120e-9 Identity = 63/206 (30.58%), Postives = 93/206 (45.15%), Query Frame = 1
Query: 355 GMTALHTAAERGHAEATRILAKATDVEXXXXXXXXXXXXXXXXXXXELHTVEALVAAGADVSLRVENEYDVDYEGLSGDCSALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRLTALHHAVAGMKLDAIEFLMDAGADVDAGDQDWFPIHFAIKANSPEAVLALARHGADLEQQDLLGRSPLYCAAECFHMEALNALLSAGANPN 972
G T LH AA GH +L + E L VEALV+A A++SLR ++ D SA+D AA+ GHV+VM++L++HG D G D GA+ GD P+H A+++ S + + AL RHGAD + + S L+ AA+ + + +LL+A A+PN
Sbjct: 83 GDTPLHIAASLGHHSILTLLL-LQEAEVNALDGEDSAPLHVEAEQGSLAAVEALVSAHANLSLRFGDD----------DLSAMDRAAYFGHVDVMRVLIQHGIDQSDAG------------ATGA---------DVGAEDCGGDT---PLHLAVRSASVDTMAALLRHGADANRVNGDQLSALHLAAKSSAVAMVYSLLAASAHPN 253
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Ankyrin (repeat domain-containing protein n=2 Tax=Deinococcus TaxID=1298 RepID=A0A418V7N1_9DEIO) HSP 1 Score: 65.9 bits (159), Expect = 1.300e-8 Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 520 AAGADVSLRVENEYDVD---YEGLSGD-CSALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRLTALHHAVAGMKLDAIEFLMDAGADVDAGDQDWF-PIHFAIKANSPEAVLALARHGADLEQQDLLGRSPLYCAAECFH 927
AA A + +V + + D + S D +AL AAF GH + L+R GA V S N ++ LH AVAG L + L+ AGADV+A QD F P+ A++ + + V L HGA +++ RS AA+ H
Sbjct: 69 AAAAGQTAQVMEKLEADPQLLQAFSPDGFTALGLAAFFGHQELTTELLRRGADVHAASRNAMQVQPLHSAVAGNHLGTVRALLQAGADVNAVQQDGFTPLMGAVQNGNTDLVALLLSHGAAPDRRTADDRSAWTLAAQENH 209
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Uncharacterized (protein n=6 Tax=Streptomyces TaxID=1883 RepID=A0A7Z6TNS3_9ACTN) HSP 1 Score: 63.5 bits (153), Expect = 2.650e-8 Identity = 44/127 (34.65%), Postives = 59/127 (46.46%), Query Frame = 1
Query: 595 SALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRLTALHHAVAGMKLDAIEFLMDAGADVDAGDQ--DWFPIHFAIKANSPEAVLALARHGADLEQQDLLGRSPLYCAAECFHMEALNALLSAGANP 969
SALD A GH +V++LL+ GA E + Y LT + A + +E L+DAG A + P+ A + V L GAD+E +D GRSPL A A+ LL GA P
Sbjct: 7 SALDLAVQEGHADVVRLLLAAGAEPEGRAGPYHELTPMTEAAMFGRAAVVEALIDAGVSTGAQRDRIPYVPLVLAATLGHTDVVDVLLDRGADIEDRDFKGRSPLEWAVSFGQPAAVRLLLRRGAEP 133
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Ankyrin (repeat-containing domain protein n=1 Tax=Aspergillus pseudocaelatus TaxID=1825620 RepID=A0A5N7E845_9EURO) HSP 1 Score: 62.0 bits (149), Expect = 1.690e-7 Identity = 48/159 (30.19%), Postives = 79/159 (49.69%), Query Frame = 1
Query: 505 VEALVAAGADVSLRVENEYDVDYEGLSGDCSALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRLTALHHAVAGMKLDAIEFLMDAGADVDA-GDQDWFPIHFAIKANSPEAVLALARHGADLEQQD-LLGRSPLYCAAECFHMEALNALLSAGANPNA 975
V+ L++ G DV+ R Y Y + G A G + +++LL+ HGA +E + ALH +V +L++++ L++ GAD +A + P+H A AN + L H ++ +D LL +PL+ AA H +A+ L GAN A
Sbjct: 17 VKVLLSKGVDVNTR---NYHDGYAPIHG-------AVSGDFIEILQLLLDHGAFLETPTIQPEGKNALHFSVTCRRLNSLKILLERGADPNALMIERVTPLHLAAAANWIPGIELLMEHNVFIDARDSLLHETPLHKAARNRHHKAIQKLCELGANQQA 165
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Ankyrin (repeat domain-containing protein n=5 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A4S3GJR2_9ACTN) HSP 1 Score: 60.1 bits (144), Expect = 7.580e-7 Identity = 46/135 (34.07%), Postives = 62/135 (45.93%), Query Frame = 1
Query: 505 VEALVAAGADVSLRVENEYDVDYEGLSGDCSALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRLTALHHAVAGMKLDAIEFLMDAGADVDAGD--QDWFPIHFAIKANSPEAVLALARHGADLEQQDLLGRSPL 903
V L+A+G V +D EG S ALD A GH +V++LL+ GA E + Y LT + A + +E L+DAG A P+ A P+ V L GAD+E +D GRSPL
Sbjct: 23 VARLLASGVGVDA-------IDREGRS----ALDLAVQEGHADVVRLLLAAGADPEGRAGPYHELTPMTEAAMFGRAAVVEALIDAGVSTGAQRVRSPHVPLVLAATCGHPDVVELLLDRGADIEDRDFKGRSPL 146
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Ankyrin (repeat and death domain containing 1B n=10 Tax=Sciuridae TaxID=55153 RepID=I3MEA9_ICTTR) HSP 1 Score: 61.2 bits (147), Expect = 1.680e-6 Identity = 44/126 (34.92%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 583 SGDCSALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRLTALHHAVAGMKLDAIEFLMDAGADVDAGDQDWF-PIHFAIKANSPEAVLALAR--HGADLEQQDLLGRSPLYCAAECFHMEALNALL 951
S +C+AL FA G H++ + L+ H A V+ + LT +H A + + L+ AGAD A +QD +HFA ++N+ V L + H DL Q D GR P AAE H+E + L+
Sbjct: 3 SMNCTALHFAVGGNHLSAVDFLLNHKARVDIADKH--GLTVIHLAAWTGSFEIMLMLVRAGADQRAKNQDGMNALHFAAQSNNVHIVEYLIQDLHLKDLNQPDERGRKPFLLAAERGHVEMIEKLI 126
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Hypothetical (protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UWK9_BRAAE) HSP 1 Score: 62.0 bits (149), Expect = 1.730e-6 Identity = 77/258 (29.84%), Postives = 121/258 (46.90%), Query Frame = 1
Query: 502 TVEALVAAGADVSLRVENEYDVDYEGLSGDCSALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRLTALHHAVAGMKLDAIEFLMDAGADVDA-GDQDWF-PIHFAIKANSPEAVLALARHGADLEQQDLLGRSPLYCAAECFHMEALNALLSAGANPNACSEVCSPLQLVAASENSN-SVVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNINLQDSKGDSP-LHLAAVQFSSRLVDLLLRQGAD 1263
T + L+ GADV+LR ++Y+ +AL AA G+V + K+L+ A ++ N + L AV + EFL++ GA+V+ G +D +H A + E V L +GAD++ QD+ G+SPL A H E L++ GA+ N + L A+ N + K+ XXXXXXXXX +NL+DSK ++ LH AA+ + + ++LL + AD
Sbjct: 2939 TAKFLINHGADVNLR-SSKYNA---------TALHDAAATGNVEIAKVLLSKKADIDAQDINGN--SPLMFAVNKNHTETAEFLINQGANVNLRGSKDKIMALHVAAATGNVEIVNVLVSNGADIDAQDINGKSPLIYAVRKNHTETAKFLINKGADVNLRGSKDNATALHDAAATGNVEIAKVLLSKDADIDAQDINGCSPLIFAVSKNHTETXXXXXXXXXXVNLRDSKDNATALHDAALTENVEIANVLLSKDAD 3184
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Match: Predicted (protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V1C4_MONBE) HSP 1 Score: 58.9 bits (141), Expect = 2.380e-6 Identity = 53/168 (31.55%), Postives = 76/168 (45.24%), Query Frame = 1
Query: 505 VEALVAAGADVSLRVENEYDVDYEGLSGDCSALDFAAFGGHVNVMKLLVRHGAGVEDTSHNYRRL-----TALHHAVAGMKLDAIEFLMDAGADVDAGDQDWF-PIHFAIKANSPEAVLALARHGADLEQQDLLGRSPLYCAAEC-FHMEALNALLSAGANPNACSEV 987
V+AL+ GAD+ + + + V L A G + + + GA V S R L T LH A K+DA+ L+ AGA VDA ++D P+H V L HGAD + D+ GR+PL+ A + L AL+ AG + +A EV
Sbjct: 57 VQALLDGGADLHCKDKRQQSV-----------LHLAIIYGQTELTAIFLAAGADVH-ASDVVRSLCLWQNTPLHVACRRRKVDAVRALLQAGARVDAQNEDGLQPLHCGAHGGDLHVVHLLLEHGADPKVADITGRTPLHLAVLYGAQYQVLEALIFAGGSIDAADEV 212 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig990.17896.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig990.17896.1 >prot_E_fasciculatus_S2_contig990.17896.1 ID=prot_E_fasciculatus_S2_contig990.17896.1|Name=mRNA_E_fasciculatus_S2_contig990.17896.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=421bp LVQDLLERGASHTDKNEEGDTPLHLAAMRGHGLIVRTLLIEGADIDAVDNback to top mRNA from alignment at E_fasciculatus_S2_contig990:5527..6891- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig990.17896.1 ID=mRNA_E_fasciculatus_S2_contig990.17896.1|Name=mRNA_E_fasciculatus_S2_contig990.17896.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1365bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig990:5527..6891- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig990:5527..6891- >mRNA_E_fasciculatus_S2_contig990.17896.1 ID=mRNA_E_fasciculatus_S2_contig990.17896.1|Name=mRNA_E_fasciculatus_S2_contig990.17896.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1263bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig990:5527..6891- (Ectocarpus fasciculatus EfasUO2)back to top |