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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 672 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 672 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842631.8495963-CDS-E_fasciculatus_S2_contig9891:1054..1365 | 1696842631.8495963-CDS-E_fasciculatus_S2_contig9891:1054..1365 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9891 1055..1365 - |
| 1696842631.86898-CDS-E_fasciculatus_S2_contig9891:1654..1987 | 1696842631.86898-CDS-E_fasciculatus_S2_contig9891:1654..1987 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9891 1655..1987 - |
| 1696842631.892984-CDS-E_fasciculatus_S2_contig9891:3245..3273 | 1696842631.892984-CDS-E_fasciculatus_S2_contig9891:3245..3273 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9891 3246..3273 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9891.17888.1 >prot_E_fasciculatus_S2_contig9891.17888.1 ID=prot_E_fasciculatus_S2_contig9891.17888.1|Name=mRNA_E_fasciculatus_S2_contig9891.17888.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=224bp
MNANNTGPFGAPASGSGFSGAQPTPPPSIAQAFLTGLRSRMAECSQDLQH
MLQEATENGLVTPEDSLMHHFINAVEHLNAAQHMATSLATPLAMAEQHVQ
VFKAALKLAQQNTMDGAAQPAVDRSQGTPAQQLTALLEKNKNDALQAEEE
IILARFWNEGIAQHYRKRAELLESAYFGNGDERAVVVLLGHDKEMAENAF
AEASTVDSSTQLSGAAFVHRDAMI back to topmRNA from alignment at E_fasciculatus_S2_contig9891:1055..3273- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig9891.17888.1 ID=mRNA_E_fasciculatus_S2_contig9891.17888.1|Name=mRNA_E_fasciculatus_S2_contig9891.17888.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2219bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9891:1055..3273- (Ectocarpus fasciculatus EfasUO2)
ATGAACGCGAACAACACAGGCCCGTTTGGTAAGAACGAAGAGGTTACTTT
GCTGAATCCGGGGCCTGTTTTTGCTGATGCCCCCAGGCACCGCCTCGCAC
CGGCTCTTGGCCCCTCCTTCCTTCCCCCAGCATAGAGGATAGCCTGCAGC
TGGCTCCCACTCGGTAACATGTACATCGTACATCATATGCCGACGCAATT
TGCCGAAAGCCTGTCTACGTCCCTTTCACTTTTTGGTTTGGAGCGCGTTG
CTTCAACATGAACATGAAGCAACCGTGCACGAAGCAGGCGCAACATGTAC
TCCAAAAAAGCTCTTCAACCCCTAGGTCGACACCGGCTTACTGCGTGAAC
AGCGAGGGTGGAGGGCGGTGCACATGTACCGGATATCAACAAGATTTCCC
CTTCCCTCCCTCTGGGTGTAGTACTTGTAGTCTATGCATGAAAATGTTCC
GCCGTTTCGCTTTTGGCGAACAATGGAGCTGGTTCGATTCCGGCATTTGG
TTTTTAGACCTCCGAAAACAAGCCTCGGTTGGTCCCACGGGCGAGATATC
GCTGTATGCTACTCGGGAAGCCTAGAAAAAAGTTGGTCAGCAACACTACA
ATTCATTGCTACTCGATCACGCACTTTTTCTGCAGTGGAGGAGATGAAAT
GTTTGTTGAGATAGATGTGTTGGGGGTGTTGATATTTGTTGTGATTTAGA
AAAACAAACGAACAGGTCGGAAAAGTCAGCAGGTACTTGCGAGACGGAAG
TTCTACTGTAAAGTTCAGGCGTTCACAGGGAACCCAGAGCAGCCCGTGCC
TCGTACGCACAGAAAAGCGGTTTACCCTACATAAGCCTCTAGTCTATAAT
CGGAGGGAAAGTTGTTCGTTGTCTTCGAAAGTAGCTCCGTTTTGGCCTGA
CGGCAGGACGGCGCCAGAACCCTGCTTGAGTTCTCGCTTATAAGTTCTCG
CTTATAGTATGCCCCAAAACACTCGCGGACGTCACTAGTCTATACTGCCA
AGTGACAAACAGCCCTTGTTTTTGTCGCCAGCAACGAAGTACACTTCCTA
CAGGCCTCTCCAAAATTGTCGATCCATCAAACTTGCTTGCCCACCCAATA
CCAACTTGCTTGCCCAATAGTTTACCGTGTCGGCGGTGTATGCGTATACT
AGATTGTTGTCTCTGCTCCCGGGCCACCAAAAACCGTACAGAGCACTCAA
ACCCGTACGCATGGGGGGATAAACTTTCCCCGAAATGACGCATTGTTTTC
TCTTCACGCGATGCGTATTTATTTGTGAAAACACAGGAGCCCCTGCTTCT
GGGAGCGGCTTCAGCGGGGCTCAACCGACACCCCCACCGTCCATTGCGCA
AGCCTTCTTGACGGGGCTACGCAGCCGTATGGCGGAGTGCAGCCAAGACT
TGCAGCACATGCTGCAGGAGGCCACTGAAAATGGCCTGGTGACCCCTGAG
GATTCGTTGATGCATCATTTCATCAACGCCGTAGAACACCTGAACGCGGC
ACAGCACATGGCGACGAGCTTAGCGACACCCTTGGCTATGGCCGAACAAC
ACGTGCAGGTCTTCAAGGCGGCGCTCAAGCTTGCCCAACAGAACACCATG
GACGGCGCGGCTCAGCCCGGTAAGTAGGCGTGTGTTTTATGAAGAGTCAT
GTAAGAGAAAATGCCAACATGCGCTATAGACTATATTAGTCACGAACCAG
AGAATGGCTCGCGTTGTGTTCATTTTTATGATTTATGAAGATGTTGCTTG
TTTCGGTGGCAGTGGAATGTGTTTGGCGATCTCAATCGATGTGTTGCCTC
CGGTGACATGTTGGGGTGCGCATGCTCTGTAAAAACAGCAGGAACACTAA
AGCATTGTACTCAACCCCCAGTTTGGTGCTTGTCATACGTACGTGCATGC
GCGAACAGCGGTCGATCGTTCACAGGGCACTCCGGCTCAGCAGCTGACTG
CTCTCCTCGAGAAAAACAAGAACGATGCCCTGCAGGCCGAAGAGGAAATC
ATCCTGGCCCGCTTCTGGAACGAAGGCATCGCTCAACACTACCGCAAGAG
GGCCGAATTGTTGGAGAGCGCCTACTTCGGAAACGGAGACGAGCGCGCTG
TTGTCGTCCTGCTGGGGCACGACAAAGAAATGGCGGAAAACGCTTTCGCC
GAAGCGAGCACCGTGGACTCTTCAACCCAGCTCTCCGGAGCCGCCTTCGT
CCACCGCGATGCCATGATC back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig9891:1055..3273- >mRNA_E_fasciculatus_S2_contig9891.17888.1 ID=mRNA_E_fasciculatus_S2_contig9891.17888.1|Name=mRNA_E_fasciculatus_S2_contig9891.17888.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=672bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9891:1055..3273- (Ectocarpus fasciculatus EfasUO2)
ATGAACGCGAACAACACAGGCCCGTTTGGAGCCCCTGCTTCTGGGAGCGG
CTTCAGCGGGGCTCAACCGACACCCCCACCGTCCATTGCGCAAGCCTTCT
TGACGGGGCTACGCAGCCGTATGGCGGAGTGCAGCCAAGACTTGCAGCAC
ATGCTGCAGGAGGCCACTGAAAATGGCCTGGTGACCCCTGAGGATTCGTT
GATGCATCATTTCATCAACGCCGTAGAACACCTGAACGCGGCACAGCACA
TGGCGACGAGCTTAGCGACACCCTTGGCTATGGCCGAACAACACGTGCAG
GTCTTCAAGGCGGCGCTCAAGCTTGCCCAACAGAACACCATGGACGGCGC
GGCTCAGCCCGCGGTCGATCGTTCACAGGGCACTCCGGCTCAGCAGCTGA
CTGCTCTCCTCGAGAAAAACAAGAACGATGCCCTGCAGGCCGAAGAGGAA
ATCATCCTGGCCCGCTTCTGGAACGAAGGCATCGCTCAACACTACCGCAA
GAGGGCCGAATTGTTGGAGAGCGCCTACTTCGGAAACGGAGACGAGCGCG
CTGTTGTCGTCCTGCTGGGGCACGACAAAGAAATGGCGGAAAACGCTTTC
GCCGAAGCGAGCACCGTGGACTCTTCAACCCAGCTCTCCGGAGCCGCCTT
CGTCCACCGCGATGCCATGATC back to top
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