mRNA_E_fasciculatus_S2_contig9889.17883.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9889.17883.1
Unique NamemRNA_E_fasciculatus_S2_contig9889.17883.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE)

HSP 1 Score: 1466 bits (3796), Expect = 0.000e+0
Identity = 798/1164 (68.56%), Postives = 905/1164 (77.75%), Query Frame = 2
Query:    2 SVLNAMGAIVMLTDAVCMGMLALSAGMFRWSTTADRIDIVVMVTQQLCVAVLVVPLYMDTLLSLRGTIRNRKPRLKTRESASQRAEREFINRRALRLWGKTWFRMVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYPEWSFK-LRAPVPIDLPRRNSGAFDWYGGNHDNADAITDQRVSDRSWRWKRGPVESDHPLRRSSYSFHSTIPAVGMEAAGQTSSPWNADNYGSDERNGSDGSGPIEDSLSLRQANILIPSAVVVDRQDDAGPLAVRDCTSHLHSGSAKRRDGSHGRQNRAGLIQDDDLPRRRIRLPGTSEVLDDAVHEQVTGDKEANLKSDANVQGPRHRRGHRLSEPTEEDFPRRRSSFWSVSGVSVDYVDNMNVQSVPEHNNDPEYCCDAHGPQYGQQHARKGLVEDSLPRRRSCSS-FPIKSVNNTDETDRQPLPEHESDMEPVVNEDGSQHGWGHRRGGILEDDLPHRRPGYSATLGSAPNLAEDPSSRAMHNLDTNMWPASDQHSAWSDRTHKWGEPVEDDVPRRRSVFSSASTTSGDSIYGPGRPSVPKQVSESDMDQTLRQRGRSRPRGGPLENDLPHRRPSLSFSSSCAGD--LAKYGLQAVQEHGGDASTIDTNRSRQGERAKRGEPAEDDLPRRRSVFLS-STTSVDSANEQLLRPMPEQGNHKRSSADWAGRQRAQGRARKGLAEDDAPRRRSWFSFSDVAPDGVKAPDVQAGHEQHDGELSVVTDH-PREDQGRVRGGVVEDVLPHRRSGFSSASGYSTEHVDVPDLQTTHDHKSILGAVSDDHGQRHGRSGNRGALIKDELPHRRLTYDSGMGARRDRGDTSDVPVTTDHAGDPSGDSEALGNRGRWGWNGRRPIQDHIPHRRPGVSESSVVGVDDSGLALTPEHDYDREPISDSFGGIDVREGRPTGTGRKASGDVDRSLEPSRTDESPGLFGMPWGFSWGKPVATDLPRRNSRNSSDSTHRMGLASKGSSRQDGSFSTRRYSSEFNSFGNAGANPEGKKTSEEGDRSSEPSDMDESTDLFGRTWGFPRQKPVAVDIPRRYSGNLFHSTDGMGLTAY-ALSRRDGDFSTKMDARKL-GSRGDIASNAVDSLGSSARSSSARPTTRPTFLRWAHAEHKPSEIDIPRRRGSQFSISEDGGG 3469
            SVLN MGAIVMLTDAVCMGMLALSAG FR +  ADRIDIVVMV Q LC+AVLVVPLY+DTLL + G IRNR+  +KTR++A+QRAEREFINRR LRLWG+TWF MVGSN+FAC+RDTREGIRDPTGSRRQ RLRAGQIGPYPEWS K LRAPVPIDLPRRN G FDWYGG  D+ADAITDQ  S R  +WKRGP E+D+P+RRSSYS  STI AV ME AGQTSSP +A   GSDER+GS+ +GPIED+LS R +NIL+PSAVVVDR+ DAGPL  R+  SH  S SAKRR GSHGRQ  AGLI+DD LPRRRI L    E+LDDAVHEQ   + EA L++D +VQGPR RRG R  EP  EDFPRRR S WSVSG SVD+VDN ++QSVPEH+ND E+  D HGPQ GQ   R+G VEDSLPRRR CSS  P+ S++++DE DRQPLPE+ +D+E VV+ DGS HGWGHR+G  LEDDLPHRR GYSA  G A +L ED S  AMHNLDTNMWPAS Q SA SDRTHKWGEPV+DD+PRRRSVF SAST S DSI+G  R +VPK   + D+D+T  QR  S P GGP++NDL  RRPS SF S+ + +   A  GLQAV EHGGDA  +  NRS Q ERA RG P ED LPRRRSVFLS S TSVDSA+E  L+ + E  N++ SS  WAGRQR +GRA++GL EDD PRRRSWFSF D+A    KAPDVQAGHEQ DG LS+V D+ PRE QGR  GG VE+ LPHR   FSS SGYST++VDVPDLQ THD KS LG VS+DHGQ HGRS +RGALI DE P RRLTYDSGM AR D GD S VP+TTDH  D S DSE  G RGRW WNGR+PIQD+IPHRRPGVS++SVVGV+DSG++LTPE D DRE +  SFGGID  EGRP GTGRKASGDV RS EPSRT ESPGLFG+PWGF+WGKP+A DLPRR+SRNSS STHRMGLASKGS RQDGSF  RR SS+F+SFGN      GK       +SSEPS+MDES  LF R+WGFPR+KP AVD+PRRYSG+ F S+ G GL+A  ALSR+DG FST  DA  L GS+GDI +N  D LG    +SSA  T RP FL WAHAEHKP EID+PRRRGSQ S S +GGG
Sbjct:  509 SVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPVKTRDNAAQRAEREFINRRTLRLWGRTWFNMVGSNVFACVRDTREGIRDPTGSRRQDRLRAGQIGPYPEWSLKNLRAPVPIDLPRRNFGGFDWYGGQDDDADAITDQPASGRRRKWKRGPAENDYPIRRSSYSLDSTIAAVSMEEAGQTSSPRSAGISGSDERSGSNENGPIEDNLSFRHSNILVPSAVVVDRRGDAGPLTGREYVSHAQSISAKRRHGSHGRQCGAGLIEDD-LPRRRIGLAAGPEILDDAVHEQGIDENEAGLEADEDVQGPRRRRGRRRGEPAGEDFPRRRPSVWSVSGFSVDHVDNTDLQSVPEHDNDLEHFSDVHGPQNGQSRTRRGPVEDSLPRRRFCSSSIPMSSLDSSDEADRQPLPEYGNDLEAVVD-DGSLHGWGHRQGRHLEDDLPHRRSGYSAASGFARHLDEDLSLPAMHNLDTNMWPASVQQSARSDRTHKWGEPVQDDLPRRRSVFCSASTASMDSIHGSSRQAVPKDGLKFDVDETPPQRRGSCPHGGPVQNDLSSRRPSFSFRSTTSAEDPPAIDGLQAVPEHGGDAPPLVVNRSWQRERATRGGPFEDGLPRRRSVFLSTSMTSVDSADEPFLQSVLENRNYRGSSGGWAGRQRGEGRAQEGLVEDDVPRRRSWFSFFDMAAKDAKAPDVQAGHEQDDGALSIVADNDPREGQGRKPGGDVEE-LPHRCPIFSSTSGYSTDNVDVPDLQRTHDDKSFLGVVSNDHGQ-HGRSRDRGALIVDEFPRRRLTYDSGMEARVDYGDISGVPMTTDHEDDTSADSETFGIRGRWAWNGRKPIQDNIPHRRPGVSKASVVGVEDSGMSLTPERDCDRETVLGSFGGIDAGEGRPIGTGRKASGDVGRSSEPSRTYESPGLFGIPWGFTWGKPIAVDLPRRHSRNSSGSTHRMGLASKGSFRQDGSFCNRRDSSQFSSFGNTAVVLAGK-------QSSEPSNMDESKGLFRRSWGFPREKPTAVDLPRRYSGSSFDSSHGTGLSANKALSRQDGGFSTGPDASHLLGSQGDIMTNPADRLGGRTSTSSAIQTARPAFLGWAHAEHKPIEIDVPRRRGSQLSFSLEGGG 1661          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L6_ECTSI)

HSP 1 Score: 526 bits (1355), Expect = 6.980e-174
Identity = 278/393 (70.74%), Postives = 315/393 (80.15%), Query Frame = 2
Query:  314 MVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYPEWSF-KLRAPVPIDLPRRNSGAFDWYGGNHDNADAITDQRVSDRSWRWKRGPVESDHPLRRSSYSFHSTIPAVGMEAAGQTSSPWNADNYGSD-ERNGSDGSGPIEDSLSLRQANILIPSAVVV-DRQDDAGPLAVRDCTSHLHSGSAKRRDGSHGRQNRAGLIQDDDLPRRRIRLPGTSEVLDDAVHEQVTGDKEANLKSDANVQG-PRHRRGHRLSEPTEEDFPRRRSSFWSVSGVSVDYVDNMNVQSVPEHNNDPEYCCDAHGPQYGQQHARKGLVEDSLPRRRSCSS-FPIKSVNNTD-ETDRQPLPEHESDMEPVVNEDGSQHGWGHRRGGILEDDLPHRRPGYSATLGS 1474
            MVGSNLFAC+RDTREGIRDPTGSR QAR RAG +GPYP WS  ++RAPVPIDLPRRNSG FDWYGG  D+A+AITDQR SDR WRWKRGP ES HP+R SSYS  STI AV ME AGQTSS  +AD +GSD ER+GS+ SGPIEDSLS   ++ILIPSAVVV DRQ DAGPL  R+C SH  S S KRR GSHGRQN AGLI+DD LPRRRI L    ++LDDAVH+QV  +KEA+L+SD +VQG PR RRG R  EPTEEDFP RRSS WSVSG SVD+V+N +VQS+PEH+ND EY  +AHGP+  Q  AR+G VEDSLPRRR CSS  P+ SV+N+  E DRQPLP+H +D+E VV EDGSQHGWGHRRGG+LEDDLP RR GYSAT  S
Sbjct:    1 MVGSNLFACVRDTREGIRDPTGSRHQARSRAGPVGPYPVWSLSRIRAPVPIDLPRRNSGGFDWYGGQDDDANAITDQRASDRRWRWKRGPTESAHPVRPSSYSLDSTIVAVSMEKAGQTSSLRSADTFGSDDERSGSNESGPIEDSLSFPHSSILIPSAVVVVDRQGDAGPLTARECASHFQSVSLKRRHGSHGRQNGAGLIEDD-LPRRRIGLAAAPKILDDAVHKQVIDEKEADLESDEDVQGGPRRRRGRRPGEPTEEDFPLRRSSVWSVSGFSVDHVNNTDVQSMPEHDNDLEYFSNAHGPRNRQSRARQGPVEDSLPRRRFCSSSIPMTSVDNSSIEADRQPLPQHGNDLEAVVEEDGSQHGWGHRRGGLLEDDLPRRRSGYSATSTS 392          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX1_9PHAE)

HSP 1 Score: 433 bits (1114), Expect = 4.970e-125
Identity = 339/941 (36.03%), Postives = 462/941 (49.10%), Query Frame = 2
Query:  155 LVVPLYMDTLLSLRGTIRNRKPRLKTRESASQRAEREFINRRALRLWGKTWFRMVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYPEWSFKLRAPVPIDLPRRNSGAFDWYGGNHDNADAITDQRVSDRSWRWKRGPVESDHPLRRSSYSFHSTIPAVGMEAAGQTSSPWNADNYGSDERNGSDGSGPIEDSLSLRQANILIPSAVVVDRQDDAGPLAVRDCTSHLHSGSAKRRDGSHGRQNRAGLIQDDDLPRRRIRLPGTSEVLDDAVHEQVTGDKEANLKSDANVQGPRHRRGHRLSEPTEEDFPRRRSSFWSVSGVSVDYVDNMNV-QSVPEHNNDPEYCCDAHGPQYGQQHARKGLVEDSLPRRRSCSSFPI-KSVNNTDETDRQPLPEHESDMEPVVNEDGSQHGWGHRRGGILEDDLPHRRPGYSATLGSAPNLAEDPSSRAMHNLDTNMWPASDQHSAWSDRTHKWGEPVEDDVPRRRSVFSSASTTSGDSIYGPGRPSVPKQVSESDMDQTLRQ---RGRSRPRGGPLENDLPHRR---PSL-------------------------------SFSSSCAGDLAKYGLQAVQEHGGDASTIDTNRSRQGERAKRGE----PAEDDLPRRRSVF-LSSTTSVDSANEQLLRPMPEQGNHKRSSADWAGRQRAQGRARKGLAEDDAPRRRSWF-SFSDVAPDGVKAPDVQAGHEQHDGELSVVTDHP-REDQGRVRGGVVEDVLPHRRSGFSSASGYSTEHVDVPDLQTTHDH-KSILGAVSDDHGQRHGRSGNRGALIKDELPHRRLTY------------DSGMGARRD-RGDTSDVPVTTDHAGDPSGDSEALGNRGRWGWNGRRPIQDHIPHRRPGVSESSVVGV-----DDSGLALTPEHDYDREPISDSFGGIDVREGRPTGT 2782
            LVVPLY+DT +SL G +R+R+ R+K RE+  +RAEREFI RR LRLW  TWFRMVG+NLFAC+RDTREGIRDPTGSR QARLRAG+IGPYPEW+FKL  PV IDLPRR SGA  WY    ++ DA T+Q  S R    +  P+E+D PLRRS YSF+S   +  M+ +G+ +     D +                                                             S+GRQN+ G   +DDLPRRR   P  S  +D+A+ +Q   D   +  + + VQ   H RG     PTEED PRRR  F    GV V+  DN++V +S PEH      C         Q   R GL+EDSLPRRRSC    +  S  + D+     +PEH+  +E  V+E  ++ GW  RR G +EDDLPHRR G S+T G+A +  + P  +A H+   N  P  D+       T +WGEPVED +PRRRSVFSSAST S D      + SV     E+D+   + +   RG  R R GP E++LPHRR   PS+                                 S++ +G +   GL +  +HG D + +D +    G +  RG     P ED LP+RRS+   +ST SV + N    +P PE GN   S+    G +  +     GLA+DD PRRR WF S S  +   +      +  +  +G  S V +   +  +G   G  VED LP RR  + S S  S  + +    Q+  +H    +  V+ D G + GR    G  ++ +LP  R  +            D+G+ A +  +G  + V  + D       D    G   +W    R P +D +P RR  +S +S VG      D+SG+ + PEHD     + D   G   R  + TG+
Sbjct:  610 LVVPLYLDTCVSLLGVVRSRRGRVKARENEDERAEREFIIRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWNFKLHVPVAIDLPRRRSGASYWY---EEHVDAKTEQFSSGRRSSGEGWPMENDLPLRRSRYSFNSRTSSASMDTSGEMAKSVKKDEH------------------------------------------------------------RSYGRQNQ-GDATEDDLPRRRFFHPSISGSVDNAIDKQAIQDHGVDTGAISEVQDRNHGRGRTPGGPTEEDLPRRRPGFALAPGVLVNRADNLHVVRSAPEHGE----C---------QTRKRGGLMEDSLPRRRSCLFSELGSSEGSIDDHGLPSVPEHDHGLEDAVDEIDARRGWERRRAGPIEDDLPHRRSGSSSTSGAASHDPDHPGVQAKHDYSKNTRPTGDERGDRRSVTQRWGEPVEDSLPRRRSVFSSASTASVDGSSERQKESV--STCENDLGSVVDENSRRGWGRVRRGPAEDNLPHRRSVFPSMWDSAKDSRGHGLRKWGEXXXXXXXXXXXXXXXASTASSGSINDAGLPSRTDHG-DGALLDADED--GLQHCRGRKWCGPIEDGLPQRRSISSFASTASVGNNNNTGPQPAPELGNSATSAVCEDGLKNGRRPKWGGLAQDDLPRRRPWFFSTSTSSTSSISDTGQPSASDNGNGGTSGVDESGLKHGRGNEWGAPVEDDLPRRRPIYFSRSKASRSNRNGIGPQSALEHGNGAMSTVAKD-GLQLGRGRKSGRPVERDLPQLRSRFSPTSTASISSISDTGLQAPQSPQGHQNGVAPSIDED-----DGLKDGRDRKW----REPTEDDLPRRR--LSLTSTVGYAVGFPDESGVQMGPEHDSGLSSVVDESDGRHGRGQQWTGS 1456          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD37_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 2.960e-102
Identity = 256/641 (39.94%), Postives = 325/641 (50.70%), Query Frame = 2
Query:  248 QRAEREFINRRALRLWGKTWFRMVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYPEWSFKLRAPVPIDLPRRNSGAFDWYGGNHDNADAITDQRVSDRSWRWKRGPVESDHPLRRSSYSFHSTIPAVGMEAAGQTSSPWNADNYGSDERNGSDGSGPIEDSLSLRQANILIPSAVVVDRQDDAGPLAVRDCTSHLHSGSAKRRDGSHGRQNRAGLIQDDDLPRRRIRLPGTSEVLDDAVHEQVTGDKEANLKSDANVQGPRHRRGHRLSEPTEEDFPRRRSSFWSVSGVSVDYVDNMNV-QSVPEHNNDPEYCCDAHGPQYGQQHARKGLVEDSLPRRRSCSSFPI-KSVNNTDETDRQPLPEHESDMEPVVNEDGSQHGWGHRRGGILEDDLPHRRPGYSATLGSAPNLAEDPSSRAMHNLDTNMWPASDQHSAWSDRTHKWGEPVEDDVPRRRSVFSSASTTSGDSIYGPGRPSVP--KQVSESDMDQTLRQRGRSRPRGGPLENDLPHRRPSLSFSSSCAGDLAKYGLQAVQEHGGDASTIDTNRSRQGERAKRGEPAEDDLPRRRSVFLS-STTSVDSANEQLLRPMPEQGNHKRS---SADWAGRQRAQGRARKGLAEDDAPRRRSWFSFS 2146
            +RAEREFI RR LRLW  TWFRMVG+NLFAC+RDTREGIRDPTGSR QARLRAG+IGP+PE  FKLR PV IDLPRR SGA  WY    ++ DA T+Q    R    +  P+E+D PLRR  YSFHS   +  M  +G+ + P   D +                                                             S+GRQN+AG  +DD LPRRR   P     +D+ + EQ   D   +  + + VQ   H RG     PTEED PRRR  +    GV VD  DN++V +S PEH             +  +   R GL++DSLPRRRSC    +  S    D+     + EH+  +E  V+E  ++  W  RR G +EDDLPHRR G+S+T G+A +  + P  +  H+   N  P  D+       T +WGEPVED VPRRRS FSSAST S D      + SV   +   E  +D+  R RG  R R GP E++LPHRRP     S  A D   +GL+                       K GEP E+DLPRRRS F S ST S+ S ++  L   P + +H+      AD  G Q  +GR R G  ED  P+RRS FS +
Sbjct:  810 RRAEREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPHPELYFKLRVPVAIDLPRRRSGASYWY---EEHVDANTEQCSPGRRSSGQGLPMENDLPLRRPRYSFHSRTSSPSMYTSGEMAKPMKMDEH------------------------------------------------------------RSYGRQNQAGATKDD-LPRRRFFSPSMLGSVDNVIAEQAMQDYGIDTGAISEVQDRNHGRGRTPGGPTEEDLPRRRPGYLLAPGVLVDRADNLHVVRSAPEH-------------EESRTQKRGGLMDDSLPRRRSCLFSDLGSSKGRIDDHGLLSVLEHDHGLEYAVDEIDARRDWERRRAGPIEDDLPHRRSGFSSTPGAASHDPDHPGVQTKHDYSKNTRPTGDKRGDRRSVTQRWGEPVEDSVPRRRSDFSSASTASVDGSNKRQKESVLMCENYQEPVVDEESR-RGWGRVRAGPAEDNLPHRRPVFPSMSDYAKDSRGHGLR-----------------------KWGEPVENDLPRRRSWFSSASTASICSISDTGL---PSRTDHRDGVLLDADDDGLQHCRGRKRCGPIEDGLPQRRSIFSIA 1346          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F2_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 2.640e-48
Identity = 107/191 (56.02%), Postives = 132/191 (69.11%), Query Frame = 3
Query: 1914 LNGENPLRTI-FLAVARFSYLR--RHR*TAQMSNCCGQCRSKEITKDLRQIGPADNALRVVPGKGLRKTMRRDGAHGSPFLMLRQTVSRHLTCRLGTNNMMAN-CRSSLT-THERIRDVFVEESLKTCYPTAVPVFPLLRGIRLNMSMYLTCKQRMITNRS*GLFRTITVNDMVAVGIGEHS*RMNCPTAV 2471
            ++GE+PL T+ +  +     L+  R   TA M+  C Q RS ++T+D+R +GPADN LRV+ GKGL KTM R G  GSPFL+LRQT SRHL CR+G   +MA+ CR SLT THER+R V+VEE LKT Y TA P  PL +     MSM L  K RM+TNRS GLFRT+TVND+VAV IG+HS R  CP AV
Sbjct:    5 IDGEDPLVTMCYTTIPVTPPLQGLRQFLTALMNTFCSQRRSMDVTEDVRYMGPADNVLRVLAGKGLWKTMCRAGDRGSPFLILRQTASRHLICRMGIKKVMAHSCRLSLTRTHERVRGVYVEEPLKTFYHTAGPSSPLPK-----MSMCLIWKHRMVTNRSRGLFRTMTVNDIVAVEIGKHSQRTICPAAV 190          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY1_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 3.250e-48
Identity = 124/297 (41.75%), Postives = 150/297 (50.51%), Query Frame = 2
Query:  239 SASQRAEREFINRRALRLWGKTWFRMVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYPEWSFKLRAPVPIDLPRRNSGAFDWYGGNHDNADAITDQRVSDRSWRWKRGPVESDHPLRRSSYSFHSTIPAVGMEAAGQTSSPWNADNYGSDERNGSDGSGPIEDSLSLRQANILIPSAVVVDRQDDAGPLAVRDCTSHLHSGSAKRRDGSHGRQNRAGLIQDDDLPRRRIRLPGTSEVLDDAVHEQVTGDKEANLKSDANVQGPRHRRGHRLSEPTEEDFPRRRSSFWSVSGV 1129
            +  +RAEREFI RR LRLW  TWFRMVG+NLFAC+RDTREGIRDPTGSR QARLRAG+IGPYPE  FKLR PV IDLPRR SGA  W+    ++ DA T+Q    R    +  P+E+D PLRR  YSFHS   +  M+ +G+T+ P   D +                                                             S+GRQN+AG  +DD LPRRR   P     +D  + EQ   D   +  +   V    H RG     PTEED PRRR  +    GV
Sbjct:  666 TVGRRAEREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPESYFKLRVPVAIDLPRRRSGASYWH---EEHVDANTEQCSPGRRSSGQGWPMENDLPLRRPRYSFHSRTSSPSMDTSGETAKPMKMDEH------------------------------------------------------------RSYGRQNQAGATKDD-LPRRRFFSPSMLGSVDIVIAEQAMQDYGIDTGAILEVHDRNHGRGRTPGGPTEEDLPRRRPGYVLAPGV 898          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 1.080e-43
Identity = 95/144 (65.97%), Postives = 113/144 (78.47%), Query Frame = 2
Query:    2 SVLNAMGAIVMLTDAVCMGMLALSAGMFRWSTTADRIDIVVMVTQQLCVAVLVVPLYMDTLLSLRGTIRNRKPRLKTRESASQRAEREFINRRALRLWGKTWFRMVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYPEW 433
            SVLNA+ A+VMLTDAVCMGMLAL+AG F  + TA R+D  VMV Q LC+AVLV+PLY+DT +S+ G IRNRK  +  RE+ + RAERE   R  LRLWG+ WFRMV SN+FACLRDTREGIR PT S RQ RLR G+IGP+P+W
Sbjct:  554 SVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNRKGSVDERENEADRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIRGPTHSARQGRLRTGRIGPFPDW 697          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 3.230e-10
Identity = 53/146 (36.30%), Postives = 82/146 (56.16%), Query Frame = 2
Query:    2 SVLNAMGAIVMLTDAVCMGMLALSAGMFRWSTTADRIDIVVMVTQQLCVAVLVVPLYMDTLLSLRGTIRNR--KPRLKTRESASQRAE--REFINRRALRLWGKTWFRMVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYP 427
            SV+N +GA ++  DAVC G+LA++A  +  ++ A  ++  V V Q + +  LV+P+Y+D +  + G IR R  K   KT +  +  +   R++I     R W  TW  M+  N+FAC RDTR+G+R P        L A + GPYP
Sbjct: 1809 SVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKPH------LLTAARSGPYP 1948          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Mucin-1 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 9.500e-10
Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 2
Query:    2 SVLNAMGAIVMLTDAVCMGMLALSAGMFRWSTTADRIDIVVMVTQQLCVAVLVVPLYMDTLLSLRGTIRNRKPRLKTRESASQ-RAE----REFINRRALRLWGKTWFRMVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYP 427
            SV+N +GA ++  DAV  G+LA++A  +  ++ A  ++  V V Q + +  LV+P+Y+D +  + G IRNR  +   +    Q + E    R++I     R W  TW  M+  N+FAC RDTREG+R P        L A + GPYP
Sbjct: 1768 SVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKPH------LLTAARSGPYP 1908          
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 1.970e-9
Identity = 59/172 (34.30%), Postives = 85/172 (49.42%), Query Frame = 2
Query:    2 SVLNAMGAIVMLTDAVCMGMLALSAGMFRWSTTADRIDIVVMVTQQLCVAVLVVPLYMDTLLSLRGTIRNR--KPRLKTRESAS--QRAEREFINRRALRLWGKTWFRMVGSNLFACLRDTREGIRDPTGSRRQARLRAGQIGPYPEWSFKLRAPVPIDLPRRNSGAFDWYG 505
            SV+N + A V   DA+ MG+ A SA  +  +  A  ++  V+V Q L +  LV+P+Y+D +  + G IRNR  K   KT    +  +R  R +I     R W  TW  M+  N+FAC RDT EG+R P  +       A + GPYP          P+D  ++  G  D  G
Sbjct: 1587 SVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRKPRFTT------AARSGPYP----------PLDRSKQAGGTEDGGG 1742          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9889.17883.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
Uncharacterized0.000e+068.56protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.980e-17470.74protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.970e-12536.03protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.960e-10239.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.640e-4856.02protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.250e-4841.75protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.080e-4365.97protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.230e-1036.30protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Mucin-19.500e-1036.05n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Uncharacterized1.970e-934.30protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9889contigE_fasciculatus_S2_contig9889:910..5268 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size3472
Hectar predicted targeting categoryother localisation
Exons4
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-00_008770.1
Cds size387
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9889.17883.1prot_E_fasciculatus_S2_contig9889.17883.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9889 1998..2384 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842631.2134705-UTR-E_fasciculatus_S2_contig9889:909..19971696842631.2134705-UTR-E_fasciculatus_S2_contig9889:909..1997Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9889 910..1997 -
1696842631.241016-UTR-E_fasciculatus_S2_contig9889:2384..40431696842631.241016-UTR-E_fasciculatus_S2_contig9889:2384..4043Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9889 2385..4043 -
1696842631.2571409-UTR-E_fasciculatus_S2_contig9889:4324..44121696842631.2571409-UTR-E_fasciculatus_S2_contig9889:4324..4412Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9889 4325..4412 -
1696842631.2693498-UTR-E_fasciculatus_S2_contig9889:4709..48071696842631.2693498-UTR-E_fasciculatus_S2_contig9889:4709..4807Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9889 4710..4807 -
1696842631.2854314-UTR-E_fasciculatus_S2_contig9889:5116..52681696842631.2854314-UTR-E_fasciculatus_S2_contig9889:5116..5268Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9889 5117..5268 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842631.2264202-CDS-E_fasciculatus_S2_contig9889:1997..23841696842631.2264202-CDS-E_fasciculatus_S2_contig9889:1997..2384Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9889 1998..2384 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9889.17883.1

>prot_E_fasciculatus_S2_contig9889.17883.1 ID=prot_E_fasciculatus_S2_contig9889.17883.1|Name=mRNA_E_fasciculatus_S2_contig9889.17883.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=129bp
MSNCCGQCRSKEITKDLRQIGPADNALRVVPGKGLRKTMRRDGAHGSPFL
MLRQTVSRHLTCRLGTNNMMANCRSSLTTHERIRDVFVEESLKTCYPTAV
PVFPLLRGIRLNMSMYLTCKQRMITNRS*
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mRNA from alignment at E_fasciculatus_S2_contig9889:910..5268-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9889.17883.1 ID=mRNA_E_fasciculatus_S2_contig9889.17883.1|Name=mRNA_E_fasciculatus_S2_contig9889.17883.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4359bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9889:910..5268- (Ectocarpus fasciculatus EfasUO2)
CAGCGTTCTGAATGCGATGGGAGCAATCGTGATGTTGACTGACGCGGTTT GTATGGGGATGCTGGCTCTGTCCGCTGGCATGTTCCGCTGGAGTACCACT GCGGATAGGATCGATATTGTGGTCATGGTAACACAGCAACTGTGTGTTGC AGGTGAGATGCGGATGAAGTTCATTGTGATGCCGGCAACATAAATCTGAC GTGCGCCGTAAGCTGATCATGTCTGCCAGGTATTGGTCTATTTTTTTGGT GCACCACACTTCTTTTCTCTTACAGTTGCTCAGGGGCCCTCCTGTGTATG TACAGCCCCGAACATCCGTGGCAAGAAGATCCAAAAACAATTTTTGTGTC CTGCCTCCAGGGAAGGGAAATCTAGCTAAGTTACCAAGTTTTCGGTGCAT GTTGAGTTCGCCTCGCTGTCCGCCCTGATTCTCGGTGGGACGTCCTTGAT TGGATTGACAGTACTGGTGGTACCGCTCTACATGGATACCCTCCTGTCGT TGCGAGGGACGATTCGGAACAGGAAGCCACGCCTCAAGACCAGGGAAAGT GCGTCTCAAGTGAGTAAACAGCAGGCGCACACCCTAGCCGCTCAATAGAT TCTACCTGGTGTCAAGAAGCGGTGCCACATATCTGCCATGATTGCTGACT TGTGTCCGTGCAGTATTTTTTTAACGGGTAACCAATCGAGATGGACAGAG CATATAACCGCCGTGTCGGGAGCTGATATCGCTGGCATTGTCCCAGCTTG GGCGCAACGGAAAACCTGCCTATCATTCTTTGTGTGTTAGGGTCGAGACT AGTCGCCACCAACGGCAAACTCACTTTTGTGTCTCAAATCACGCACCACT TAACAGCGCGCCGAGCGAGAGTTCATCAACCGTCGAGCTCTTCGGCTGTG GGGGAAAACTTGGTTCCGGATGGTCGGCAGCAATTTGTTCGCATGTAAGT GCCCGTGACAGAGAGTTCTGGATGTTTGAGGTCTTGACATCGAACATGAG AGACGAACCTATGTTTAGGTTGATAGTTGCTCAGTCTTTCAAGTACGAAC GAGACCAGACCAAACAGTACGTTTTGATAGAAAACACCTCATGTCTACGA TTGAATCTGAGGCGTCATTTTACGTGTTGAACTGTCGTCGGTTGTAGCAT CTCGATGACCAAACGCGACGACTACGGCTGCATCGCGTCATGTATTCCCT CTTGGCACTTCATCTTCCAATGCAGGCCTGAGAGATACGAGAGAAGGCAT CCGTGACCCGACAGGCTCAAGGCGCCAAGCTCGTTTGAGAGCCGGGCAAA TTGGCCCTTACCCCGAGTGGTCCTTCAAACTTCGGGCACCGGTTCCTATC GACCTGCCACGTCGTAACTCTGGTGCTTTCGATTGGTACGGGGGGAATCA CGACAACGCCGATGCCATCACAGACCAACGAGTCTCGGACAGAAGTTGGA GGTGGAAAAGAGGGCCTGTGGAGAGTGATCATCCTCTGCGTCGCTCCAGC TACTCTTTTCATTCGACCATCCCCGCCGTCGGTATGGAAGCAGCCGGTCA AACGTCGTCGCCGTGGAACGCGGATAACTACGGCTCTGACGAACGTAACG GGTCGGATGGAAGTGGGCCCATTGAGGACAGTCTCTCCTTGCGGCAGGCC AATATCCTGATACCGTCAGCTGTGGTGGTGGACCGTCAAGATGATGCTGG CCCATTAGCAGTTCGGGATTGTACGAGTCACCTTCATAGCGGCTCAGCCA AGCGCCGTGACGGAAGCCATGGAAGACAGAACCGAGCAGGTCTCATTCAG GATGATGACCTACCTCGCCGCCGCATCAGACTTCCCGGGACGTCAGAGGT TTTGGATGATGCCGTCCACGAACAGGTGACCGGAGATAAGGAAGCTAACC TGAAGTCTGATGCCAACGTGCAAGGTCCAAGACACCGTCGGGGTCATAGG CTAAGCGAACCGACAGAGGAAGATTTTCCACGCCGCCGCTCGAGCTTCTG GTCTGTGTCAGGTGTTTCGGTCGACTACGTCGACAATATGAACGTGCAGT CTGTGCCGGAGCATAACAATGACCCAGAGTATTGTTGTGATGCACATGGT CCACAGTACGGTCAACAACATGCGCGAAAGGGGCTCGTCGAGGACAGCTT GCCCCGCCGACGCTCCTGTTCCTCTTTTCCGATAAAATCGGTAAACAACA CCGATGAAACCGACCGGCAGCCACTGCCGGAGCATGAGAGCGACATGGAA CCTGTTGTCAACGAGGATGGCTCACAGCATGGTTGGGGTCATCGACGGGG AGGAATCCTTGAGGACGATCTGCCACACCGCCGTCCCGGTTACTCCGCCA CCTTGGGTTCCGCACCAAATCTTGCTGAGGACCCAAGCTCGAGGGCGATG CACAATCTCGACACGAACATGTGGCCTGCTTCCGACCAGCACAGTGCATG GAGTGATCGGACTCACAAATGGGGAGAGCCTGTGGAAGACGACGTACCCC GGCGTCGGTCGGTTTTCTCTTCTGCTTCGACTACATCGGGTGACAGCATA TATGGACCTGGCCGGCCGTCTGTGCCGAAGCAAGTCTCGGAGTCCGATAT GGATCAGACCCTACGCCAACGCGGTCGCAGCCGGCCACGTGGAGGCCCCC TTGAGAATGACCTGCCTCACAGACGACCCAGTTTGTCCTTTAGTTCCAGT TGCGCGGGAGATCTAGCGAAATATGGTCTGCAGGCAGTGCAGGAGCACGG GGGCGACGCGTCCACCATCGATACAAACCGTTCACGGCAAGGGGAACGAG CTAAACGGGGAGAACCCGCTGAGGACGATCTTCCTCGCCGTCGCTCGGTT TTCCTATCTTCGACGACATCGGTAGACAGCGCAAATGAGCAATTGCTGCG GCCAATGCCGGAGCAAGGAAATCACAAAAGATCTTCGGCAGATTGGGCCG GCCGACAACGCGCTCAGGGTCGTGCCCGGAAAGGGCTTGCGGAAGACGAT GCGCCGCGACGGCGCTCATGGTTCTCCTTTTCTGATGTTGCGCCAGACGG TGTCAAGGCACCTGACGTGCAGGCTGGGCACGAACAACATGATGGCGAAC TGTCGGTCGTCACTGACCACCCACGAGAGGATCAGGGACGTGTTCGTGGA GGAGTCGTTGAAGACGTGTTACCCCACCGCCGTTCCGGTTTTTCCTCTGC TTCGGGGTATTCGACTGAACATGTCGATGTACCTGACCTGCAAACAACGC ATGATCACAAATCGATCCTAGGGGCTGTTTCGGACGATCACGGTCAACGA CATGGTCGCAGTGGGAATCGGGGAGCACTCATAAAGGATGAATTGCCCCA CCGCCGTCTCACCTACGATTCTGGCATGGGCGCCAGAAGAGACAGGGGCG ATACATCTGACGTGCCGGTGACGACTGATCATGCGGGCGATCCTAGTGGT GATTCCGAAGCGTTGGGTAACAGAGGTCGTTGGGGTTGGAACGGGAGGAG ACCCATTCAGGACCATATTCCACACCGTCGCCCCGGTGTCTCGGAAAGCT CGGTTGTGGGCGTCGATGATTCTGGTTTGGCCCTCACGCCAGAGCACGAC TATGATAGAGAGCCTATCTCGGATAGTTTCGGGGGAATCGACGTACGCGA GGGCAGACCTACCGGCACAGGGAGAAAGGCGAGTGGAGATGTGGACAGGT CATTGGAACCCAGCAGAACCGATGAGAGCCCGGGTCTATTCGGAATGCCG TGGGGATTTTCATGGGGAAAGCCCGTTGCCACAGACCTTCCACGACGTAA TTCCCGAAACTCCTCCGATTCGACACATCGCATGGGCCTAGCCTCGAAGG GCTCTTCCCGTCAGGATGGAAGCTTCTCCACCAGAAGATATTCCAGCGAG TTCAATTCGTTTGGCAATGCTGGAGCCAACCCCGAAGGGAAAAAGACAAG TGAAGAAGGGGACAGGTCGTCGGAACCCAGCGACATGGATGAGAGCACAG ACCTGTTCGGGAGAACGTGGGGATTCCCCAGGCAAAAGCCCGTTGCAGTA GACATTCCACGACGATATTCTGGAAACTTGTTTCATTCGACCGACGGCAT GGGCCTAACCGCTTACGCGCTTTCCCGCCGAGACGGAGACTTTTCCACGA AAATGGACGCCAGAAAACTTGGTTCGCGTGGTGACATTGCGTCTAACGCC GTCGATTCCTTAGGAAGTAGCGCTAGAAGCAGTAGCGCAAGGCCAACGAC AAGACCTACGTTCCTTAGGTGGGCCCATGCCGAGCACAAACCGAGTGAGA TAGATATTCCTCGACGTCGTGGCAGTCAGTTCAGTATTTCTGAGGACGGG GGGGGAGGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9889:910..5268-

>mRNA_E_fasciculatus_S2_contig9889.17883.1 ID=mRNA_E_fasciculatus_S2_contig9889.17883.1|Name=mRNA_E_fasciculatus_S2_contig9889.17883.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=387bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9889:910..5268- (Ectocarpus fasciculatus EfasUO2)
ATGAGCAATTGCTGCGGCCAATGCCGGAGCAAGGAAATCACAAAAGATCT
TCGGCAGATTGGGCCGGCCGACAACGCGCTCAGGGTCGTGCCCGGAAAGG
GCTTGCGGAAGACGATGCGCCGCGACGGCGCTCATGGTTCTCCTTTTCTG
ATGTTGCGCCAGACGGTGTCAAGGCACCTGACGTGCAGGCTGGGCACGAA
CAACATGATGGCGAACTGTCGGTCGTCACTGACCACCCACGAGAGGATCA
GGGACGTGTTCGTGGAGGAGTCGTTGAAGACGTGTTACCCCACCGCCGTT
CCGGTTTTTCCTCTGCTTCGGGGTATTCGACTGAACATGTCGATGTACCT
GACCTGCAAACAACGCATGATCACAAATCGATCCTAG
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