mRNA_E_fasciculatus_S2_contig9880.17880.1 (mRNA) Ectocarpus fasciculatus EfasUO2
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9880.17880.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G691_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 2.110e-13 Identity = 44/58 (75.86%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 1 RANRWMVRLGARDTANAGEATGGXXXXTGSEEAGERQLPPEMTAENLLKKARYVDIGK 174
RANRWMVRLGARDTANAG GG GSEEAGER+LPPEMTAENLLKKA+ V G+
Sbjct: 309 RANRWMVRLGARDTANAG---GG-----GSEEAGERRLPPEMTAENLLKKAQLVIHGR 358 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9880.17880.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9880.17880.1 >prot_E_fasciculatus_S2_contig9880.17880.1 ID=prot_E_fasciculatus_S2_contig9880.17880.1|Name=mRNA_E_fasciculatus_S2_contig9880.17880.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=161bp MVRLGARDTANAGEATGGGGGGTGSEEAGERQLPPEMTAENLLKKARYVDback to top mRNA from alignment at E_fasciculatus_S2_contig9880:345..975+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9880.17880.1 ID=mRNA_E_fasciculatus_S2_contig9880.17880.1|Name=mRNA_E_fasciculatus_S2_contig9880.17880.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=631bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9880:345..975+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9880:345..975+ >mRNA_E_fasciculatus_S2_contig9880.17880.1 ID=mRNA_E_fasciculatus_S2_contig9880.17880.1|Name=mRNA_E_fasciculatus_S2_contig9880.17880.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=483bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9880:345..975+ (Ectocarpus fasciculatus EfasUO2)back to top |