mRNA_E_fasciculatus_S2_contig988.17878.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig988.17878.1
Unique NamemRNA_E_fasciculatus_S2_contig988.17878.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK58_ECTSI)

HSP 1 Score: 781 bits (2017), Expect = 3.650e-285
Identity = 378/398 (94.97%), Postives = 387/398 (97.24%), Query Frame = 1
Query:    1 MLATCFRRTGPTARAGVFRGLHLGAPNPGSVINDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTTFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            ML++CFR TGPTARAG  RGLHLGAPNPGSVIND AYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQ   QALGQP FKVFD+LPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKE ASKDLKRGLEGLAT+LFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGR GE+GWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQF+AKTLTTFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDF HPKTQRKSRCFRITYRSMDRSLTNEE+DRLQE+VRGYIT+RLDAELR
Sbjct:    2 MLSSCFRGTGPTARAGFVRGLHLGAPNPGSVINDDAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQKNTQALGQPQFKVFDDLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKEIASKDLKRGLEGLATNLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRTGEVGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFEAKTLTTFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFIHPKTQRKSRCFRITYRSMDRSLTNEEVDRLQEIVRGYITSRLDAELR 399          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML8_9STRA)

HSP 1 Score: 478 bits (1231), Expect = 3.190e-165
Identity = 242/378 (64.02%), Postives = 284/378 (75.13%), Query Frame = 1
Query:   91 VINDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYF-QHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGED--RFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRK-GEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTTFQPYSKYPPCYKDVTFWLP------EDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            V+N H  NNV  SVAAKIG +LH    HPL IIK RIE YF Q  A    +P  +V D+L P+VT   NFD LLIPP HVSR+ +DTYYVD +RVLR HTSAHQ +LLR+G     FLVCGDVYRRDEVD +HYPVFHQMEGVR+   +E PA    ++R+  A  DL+ GLEGLA +LFG+VEMRWVDAYFPFT PS ELEI F GKW+EVLGCG I  +VM   G     +GWAFGLGLERLAMVLFSIPDIRLFWS+D RF+SQFKA   TTF+PYSKYPPC KDV+FW+P         FH+ND++E VR+VAGD+VEEI L+D+F HPKT R S+CFR+TYRSMDRSLTN+E+D LQE+VR  +  +L  ELR
Sbjct:   42 VLNGHPSNNVPASVAAKIGMNLHLRQHHPLNIIKTRIEDYFTQSPALREPRPQIEVHDSLAPVVTARDNFDSLLIPPSHVSRRATDTYYVDDKRVLRTHTSAHQVTLLRRGAPPRAFLVCGDVYRRDEVDRSHYPVFHQMEGVRVFAPDELPAGATAAEREALAVADLRAGLEGLACALFGDVEMRWVDAYFPFTNPSFELEIFFGGKWLEVLGCGAIERDVMRAGGMDDATVGWAFGLGLERLAMVLFSIPDIRLFWSDDARFTSQFKAGAATTFKPYSKYPPCLKDVSFWVPGATAEIAHGFHDNDMYEAVREVAGDMVEEIALVDEFAHPKTGRVSKCFRLTYRSMDRSLTNKEVDALQELVRQRLVDKLGVELR 419          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BX34_HYAAE)

HSP 1 Score: 459 bits (1181), Expect = 2.320e-158
Identity = 224/370 (60.54%), Postives = 279/370 (75.41%), Query Frame = 1
Query:   97 NDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKET----ASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTTFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            N   Y NVS S+AAKIG +LH    HPL IIK +IE YF    +  G P F VFDNL P+V+    FD +L+PPDH+SR+ +DTYYVD  RVLR HTSAH+ S++++G   FLV GDVYRRDE+D++HYPVFHQMEGVRI +E       D++ ++E       +DLK+ LEG+A  LFG+VEMRWV+AYFPFT PS ELEI F   W+EVLGCGV+  E++ NAG    +GWAFGLGLERLAMVLF IPDIRLFWS+D RF SQF+   +T F+PYSKYP C+KDV+FW  +D F+ N+L EVVRDVAGD+VE++ +LD+FTHPK QRKSRC+RITYR MDR+LTN+E+D +QEV+RG I + L  ELR
Sbjct:    9 NRDPYCNVSESIAAKIGSNLHLKQHHPLHIIKTKIESYFDELHRDEGAPFFTVFDNLDPVVSTYDCFDSMLVPPDHISRKNTDTYYVDRNRVLRAHTSAHEVSMMKKGFTSFLVSGDVYRRDEIDASHYPVFHQMEGVRIFSE------LDLAMKREEKVVLVKEDLKKTLEGMAKKLFGDVEMRWVEAYFPFTEPSLELEIFFNDDWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMVLFDIPDIRLFWSQDDRFISQFQNGQITKFKPYSKYPACFKDVSFWYSDD-FYENNLCEVVRDVAGDMVEQLTVLDEFTHPKMQRKSRCYRITYRHMDRNLTNKEVDDIQEVIRGKIVSDLSVELR 371          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R097_9CHLO)

HSP 1 Score: 461 bits (1185), Expect = 3.550e-157
Identity = 232/369 (62.87%), Postives = 280/369 (75.88%), Query Frame = 1
Query:   91 VINDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTT-FQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            VIN+H  NNV+  +  KIG +LH+   HPLGIIK  IE +F+ +   +    FK FDNL P+VT + NFD++LIP DHVSR P+DTYYVD + VLRCHTSAHQ  +LR+GE  FLV GDVYRRD +D+THYPVFHQMEGV + T E+A A+   SQ +E A +DLKR LEGLA  LFG+VEMRWVDAYFPFT PS ELEI F+G+W+EVLGCGV+   ++D+AGR     WAFGLGLERLAMVLF IPDIRLFW++D RF+ QF+   LTT F PYSKYPPC KDV+FW+  D F  N+L E+ R+VAGDLVEE++L+D+FTHPKT R S C+RI YRS DRSLT+EEI+  QE VR  I   LD ELR
Sbjct:  130 VINEHPMNNVTDIIFQKIGVNLHQRPTHPLGIIKAAIEEFFEAERPGM----FKSFDNLYPVVTAKANFDDVLIPEDHVSRSPNDTYYVDNETVLRCHTSAHQAEMLRKGETHFLVTGDVYRRDSIDATHYPVFHQMEGVCLFTAEDA-AKAGCSQ-EELAERDLKRSLEGLARHLFGDVEMRWVDAYFPFTEPSFELEIFFKGEWLEVLGCGVMQQAILDDAGRGDCKAWAFGLGLERLAMVLFDIPDIRLFWTDDERFAKQFQPGVLTTKFVPYSKYPPCNKDVSFWI-SDKFSENNLCEITRNVAGDLVEEVKLIDEFTHPKTGRTSHCYRIVYRSNDRSLTDEEINAKQEEVRRQIVDNLDVELR 491          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNG4_9STRA)

HSP 1 Score: 455 bits (1171), Expect = 8.090e-156
Identity = 226/374 (60.43%), Postives = 278/374 (74.33%), Query Frame = 1
Query:   85 GSVINDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRI---LTEEEAPARWDVSQRKETASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTTFQPYSKYPPCYKDVTFWLPE-DNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            G V  +H  NNV  +++ KIG+DLHR  +HPLGIIK+RIE YF+ +A   G    + FDNL P+V +  NFD+LLIPPDHVSR P DTYYVD ++VLR HTSAHQ+++L +G + FLV GDVYRRDE+D THYPVFHQMEGVRI   L E    +R    +  +   KDLK  LEG+  +LFG+VE RWVD YFPFT PS ELEI +  +W+EVLGCGV+  E++  AG+   +GWAFGLGLERLAMVLF IPDIRLFWS D RF+ QF+A  +TTF P+SKYPPCYKDV+FW+ +   F+NND FE+VR V GDLVE + L+D+F HPKT R S+CFR+ YRSM+RSLTNEEID LQE VR  ++  L  ELR
Sbjct:   71 GRVHTEHPMNNVPVTLSGKIGRDLHRNPSHPLGIIKDRIEGYFKERAATTGVA-VECFDNLFPVVPIVNNFDDLLIPPDHVSRSPIDTYYVDDKQVLRTHTSAHQSTMLGKGLEAFLVTGDVYRRDEIDRTHYPVFHQMEGVRIFPGLLE----SRGSREEGVKEVEKDLKEALEGMVVTLFGDVERRWVDTYFPFTDPSFELEIFYNDEWLEVLGCGVMQQEIVRRAGKGETLGWAFGLGLERLAMVLFQIPDIRLFWSTDERFTKQFEAGKITTFAPFSKYPPCYKDVSFWIDKVAGFNNNDFFEIVRGVGGDLVESVVLVDEFVHPKTGRASKCFRVNYRSMERSLTNEEIDVLQEEVRTQMSDALKVELR 439          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W522_9STRA)

HSP 1 Score: 453 bits (1166), Expect = 9.490e-156
Identity = 218/368 (59.24%), Postives = 277/368 (75.27%), Query Frame = 1
Query:   91 VINDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTTFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            +I    YNN+S S+A+K+G +LHR   HPL IIK +I  YF+ +  A GQP  K+FD+L P+V+V   FD +LIP DHVSRQP+DTYY++   +LR HTS H+  LL+QG   FLV GDVYRRDE+D++HYPVFHQMEG+R   E +    +D   R     + LK  LEG+  S+FG VEMRWVDAYFPFT PS ELEI F G+W+EVLGCGV+  ++ ++ G   E+GWAFGLGLERLAMVLF IPDIRLFW++DPRF +QFK   +T F+PYSKYPPCYKDV+FWL  D FH+N+LFEVVR++AGD+VE++ L+D+F HPKT+R S+CFRI YR +DR+LTNEE+D +Q VVR  I + L  ELR
Sbjct:   30 LITGDPYNNISESIASKVGVNLHRQPNHPLNIIKTKIAQYFE-ELHAQGQPKMKLFDDLSPVVSVADCFDHMLIPKDHVSRQPTDTYYLNPNTLLRTHTSCHEVPLLKQGIKNFLVAGDVYRRDEIDASHYPVFHQMEGLRFFPELDPSLPYD--DRVFIVKEHLKTTLEGMVESIFGKVEMRWVDAYFPFTDPSLELEIYFEGEWLEVLGCGVLQRQIAEHGGVVNEVGWAFGLGLERLAMVLFDIPDIRLFWTKDPRFLTQFKDGQITKFKPYSKYPPCYKDVSFWLSPD-FHDNNLFEVVRNIAGDMVEQVVLVDEFEHPKTKRVSKCFRIMYRHLDRNLTNEEVDDIQLVVRDAIVSTLGVELR 393          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase (Fragment) n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C7D4_SAPPC)

HSP 1 Score: 452 bits (1163), Expect = 2.710e-155
Identity = 218/368 (59.24%), Postives = 275/368 (74.73%), Query Frame = 1
Query:   91 VINDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTTFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            +I   AYNNVS S+AAK+G +LH    HPL IIK +I  YF     A G P  ++FD+L P+V+V+  FD++LIP DHVSR+P+DTYY++   +LR HTS H+  +LR+G   FLV GDVYRRDE+D++HYPVFHQMEG+R   E +    +D   R       LK  LEG+  ++FG VEMRWVDAYFPFT PS ELEI F G+W+EVLGCGV+  E+ +NAG   E+GWAFGLGLERLAMVLF IPDIRLFWS+DPRF SQF+   +T F+PYSK+PPCYKDV+FWL  D FH N+L+E+VRD+AGD+VE++ ++D F HPKTQR+S+CFRITYR  DR+LTNEE+D LQ VVR  +  +L  ELR
Sbjct:   30 LITGDAYNNVSESIAAKVGVNLHCQPHHPLNIIKTKIATYFDD-LHAKGHPKMQLFDSLSPVVSVDDCFDQMLIPKDHVSRKPTDTYYLNPTTLLRTHTSCHEVPMLRKGIKNFLVAGDVYRRDEIDASHYPVFHQMEGLRFFPELDPTTPYD--DRVAHVQGHLKATLEGMVEAIFGKVEMRWVDAYFPFTEPSLELEIFFEGEWLEVLGCGVLRREIAENAGVVNEVGWAFGLGLERLAMVLFDIPDIRLFWSQDPRFLSQFQDGVITKFKPYSKFPPCYKDVSFWLGPD-FHENNLYEIVRDIAGDMVEKVEVVDAFVHPKTQRESKCFRITYRHHDRNLTNEEVDGLQLVVRQELVKQLAVELR 393          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A6N4_AUXPR)

HSP 1 Score: 452 bits (1163), Expect = 1.520e-154
Identity = 226/374 (60.43%), Postives = 271/374 (72.46%), Query Frame = 1
Query:   76 PNPGSVINDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTT-FQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            P    ++ DH  NNV  S+  K+G +LH+  +HPLGIIK  I  Y Q        P  K FD+L P+VTV+ NFD++L+P DHVSR P+DTYYV    VLRCHTSAHQ  LL++GE  FL+ GDVYRRD +DSTHYPVFHQMEG+R+L     P  W   +  + A   LK+ LEGLA  LFG+VEMRWVDAYFPFT PS ELEILF+G+W+EVLGCGV    ++D+ G  G   WAFGLGLERLAMVLF IPDIRLFW+ED RF SQFKA ++ T F+PYSKYPPC+KDV FWL  D+F  N+L EVVR VAGDLVEE++L+D FTHPKT + S C+RI YRSM RSLT+EEI+ LQ  VR  I  +L  ELR
Sbjct:   80 PPRSEILTDHPSNNVPESIYEKLGVNLHQRPSHPLGIIKTSIYEYLQK-----ADPALKTFDDLYPVVTVKANFDDVLVPADHVSRNPNDTYYVSDATVLRCHTSAHQLELLKRGEPAFLITGDVYRRDSIDSTHYPVFHQMEGLRVL----GPEDWGSMEPTQYAETQLKQTLEGLAQHLFGSVEMRWVDAYFPFTEPSFELEILFKGEWLEVLGCGVTQQSIVDDGGFAGRKAWAFGLGLERLAMVLFDIPDIRLFWTEDSRFLSQFKAGSMKTKFKPYSKYPPCFKDVAFWL-SDSFTENNLCEVVRAVAGDLVEEVKLIDSFTHPKTGKTSHCYRIAYRSMQRSLTDEEINELQWTVRRDIENQLKVELR 443          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EE71_BRELC)

HSP 1 Score: 449 bits (1156), Expect = 4.900e-154
Identity = 218/363 (60.06%), Postives = 274/363 (75.48%), Query Frame = 1
Query:  115 NVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETA---SKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTTFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            N+S S+A KIG +LHR   HPL IIK +IE YF  + +  G P F +FD+L P+VT    FD +L+P DHVSR+ +DTYYVD  RVLR HTSAH+ + +++G   FL+ GDVYRRDE+D+ HYPVFHQMEGVRI TE +         RKE      ++LK  LEG+A  LFG+VEMRWV+AYFPFT PS ELEILF G+W+EVLGCGV+  E++ NAG    +GWAFGLGLERLAM+LF IPDIRLFWS D RF+SQF+   +T F+PYSKYP C+KDV+FW  +DNFH N+L EVVRD+AGD+VE++ ++D+FTHP++QRKS+C+RITYR MDR+LTN EID LQ+VVR  I   L+  LR
Sbjct:   50 NISQSIADKIGVNLHRQQNHPLHIIKTKIERYFDDQNRLHGSPKFTIFDDLDPVVTTYDCFDSMLVPQDHVSRKVTDTYYVDKYRVLRAHTSAHEVTTMKKGYTSFLISGDVYRRDEIDANHYPVFHQMEGVRIFTELDV-----FIPRKEKVVYVQQELKNTLEGIAIELFGDVEMRWVEAYFPFTEPSLELEILFNGEWLEVLGCGVLQQEIVRNAGLGENVGWAFGLGLERLAMILFGIPDIRLFWSGDERFTSQFRDGQITRFKPYSKYPACFKDVSFWH-DDNFHENNLCEVVRDIAGDMVEQVAVVDEFTHPQSQRKSKCYRITYRHMDRNLTNSEIDDLQKVVRARIVHSLNVVLR 406          
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Match: Phenylalanine--tRNA (ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y855_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 6.070e-154
Identity = 217/368 (58.97%), Postives = 272/368 (73.91%), Query Frame = 1
Query:   91 VINDHAYNNVSPSVAAKIGKDLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFDELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDVYRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETASKDLKRGLEGLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLTTFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDFTHPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR 1194
            +I    YNNVS S+AAK+G +LH    HPL IIK +I  YF  +  A GQP  +VFDNL P+ T E  FD+LLI  DHVSR+ +DTYY++   +LR HTS HQ  +L +G   FLV GDVYRRDE+D++HYPVFHQMEGVR   E +A   ++  +R E   + LK  LEG+  S+FG VEMRWV+AYFPFT PS ELEI F G+W+EVLGCGV   E+ +NA    E+GWAFGLGLERL+MVLF IPDIRLFWS+DPRF +QF+   +T F+PYSKYPPCYKDV+FWL +D FH N+L+E+VRD+AGD+VE++ ++D F HPKT R+S+CFRITYR  DR+LTNEE+D +Q VVR  +   L  ELR
Sbjct:   29 LITGDPYNNVSESIAAKVGVNLHCQPNHPLNIIKSKIVSYFD-QLHAQGQPKMQVFDNLSPVTTTENCFDQLLIAKDHVSRKATDTYYLNPTTLLRTHTSCHQVPMLSKGIKNFLVAGDVYRRDEIDASHYPVFHQMEGVRFFPELDATLPYE--ERVEIVKEHLKATLEGMVESIFGKVEMRWVEAYFPFTEPSLELEIFFEGEWLEVLGCGVTRREIAENANVINEVGWAFGLGLERLSMVLFDIPDIRLFWSQDPRFLTQFQDGVITKFKPYSKYPPCYKDVSFWLSKD-FHENNLYEIVRDIAGDMVEKVEIVDAFVHPKTNRESKCFRITYRHHDRNLTNEEVDAIQLVVRESLVANLGIELR 392          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig988.17878.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Phenylalanine--tRNA3.650e-28594.97ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
Phenylalanine--tRNA3.190e-16564.02ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
Phenylalanine--tRNA2.320e-15860.54ligase n=1 Tax=Hyaloperonospora arabidopsidis (str... [more]
Phenylalanine--tRNA3.550e-15762.87ligase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 T... [more]
Phenylalanine--tRNA8.090e-15660.43ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=... [more]
Phenylalanine--tRNA9.490e-15659.24ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 ... [more]
Phenylalanine--tRNA2.710e-15559.24ligase (Fragment) n=3 Tax=Saprolegniaceae TaxID=47... [more]
Phenylalanine--tRNA1.520e-15460.43ligase n=2 Tax=Auxenochlorella protothecoides TaxI... [more]
Phenylalanine--tRNA4.900e-15460.06ligase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0... [more]
Phenylalanine--tRNA6.070e-15458.97ligase n=1 Tax=Thraustotheca clavata TaxID=74557 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig988contigE_fasciculatus_S2_contig988:18158..20908 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score785.4
Seed ortholog evalue1.2e-224
Seed eggNOG ortholog2880.D8LK58
Model size1197
KEGG rclassRC00055,RC00523
KEGG koko:K01889
KEGG ReactionR03660
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categorymitochondrion
GOsGO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons7
EggNOG free text desc.phenylalanyl-tRNA aminoacylation
EggNOG OGsCOG0016@1,KOG2783@2759
Ec32 ortholog descriptionPhenylalanine--tRNA ligase
Ec32 orthologEc-06_008260.1
EC6.1.1.20
Cds size1197
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig988.17878.1prot_E_fasciculatus_S2_contig988.17878.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig988 18158..20908 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842630.6272814-CDS-E_fasciculatus_S2_contig988:18157..182421696842630.6272814-CDS-E_fasciculatus_S2_contig988:18157..18242Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig988 18158..18242 +
1696842630.6488996-CDS-E_fasciculatus_S2_contig988:18415..185271696842630.6488996-CDS-E_fasciculatus_S2_contig988:18415..18527Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig988 18416..18527 +
1696842630.6673687-CDS-E_fasciculatus_S2_contig988:18742..190761696842630.6673687-CDS-E_fasciculatus_S2_contig988:18742..19076Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig988 18743..19076 +
1696842630.6805196-CDS-E_fasciculatus_S2_contig988:19311..194791696842630.6805196-CDS-E_fasciculatus_S2_contig988:19311..19479Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig988 19312..19479 +
1696842630.6949377-CDS-E_fasciculatus_S2_contig988:19906..200921696842630.6949377-CDS-E_fasciculatus_S2_contig988:19906..20092Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig988 19907..20092 +
1696842630.713393-CDS-E_fasciculatus_S2_contig988:20438..205821696842630.713393-CDS-E_fasciculatus_S2_contig988:20438..20582Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig988 20439..20582 +
1696842630.728962-CDS-E_fasciculatus_S2_contig988:20740..209081696842630.728962-CDS-E_fasciculatus_S2_contig988:20740..20908Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig988 20741..20908 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig988.17878.1

>prot_E_fasciculatus_S2_contig988.17878.1 ID=prot_E_fasciculatus_S2_contig988.17878.1|Name=mRNA_E_fasciculatus_S2_contig988.17878.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=399bp
MLATCFRRTGPTARAGVFRGLHLGAPNPGSVINDHAYNNVSPSVAAKIGK
DLHRCSAHPLGIIKERIELYFQHKAQALGQPPFKVFDNLPPIVTVEQNFD
ELLIPPDHVSRQPSDTYYVDAQRVLRCHTSAHQTSLLRQGEDRFLVCGDV
YRRDEVDSTHYPVFHQMEGVRILTEEEAPARWDVSQRKETASKDLKRGLE
GLATSLFGNVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVM
DNAGRKGEIGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFKAKTLT
TFQPYSKYPPCYKDVTFWLPEDNFHNNDLFEVVRDVAGDLVEEIRLLDDF
THPKTQRKSRCFRITYRSMDRSLTNEEIDRLQEVVRGYITTRLDAELR*
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mRNA from alignment at E_fasciculatus_S2_contig988:18158..20908+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig988.17878.1 ID=mRNA_E_fasciculatus_S2_contig988.17878.1|Name=mRNA_E_fasciculatus_S2_contig988.17878.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2751bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig988:18158..20908+ (Ectocarpus fasciculatus EfasUO2)
ATGCTAGCCACCTGCTTCAGGAGGACTGGGCCCACTGCGCGGGCAGGGGT CTTCAGAGGTTTGCACCTTGGTGCGCCTAATCCAGGTTAGCCACGCTCAC CTTTCCACGTTGGTGGTGTATCTTTGTCTACTCCAATCATGAGCGACACA CAGCAGGGATTAGGCGGTGTTCTTGTACTCTTCGTGCGGTCATGCGTGAC CAGGCCACTGCTTGTACTGCTGTACCTAACTATCTGCCAACATCGGTGGT TTGCACAGGTTCGGTGATCAACGACCATGCTTACAACAATGTCTCTCCAT CTGTGGCAGCGAAGATCGGTAAAGACCTGCATCGGTGCTCTGCGCACCCA CTTGGCATCATCAAGGAGAGGTGCGCTCCAAGCTGTGTTGTTCGTAGACT ATGCATATGTGAGGGTTGCTGATGCATCCGAAGACGGCGAGCGAGATATA TTCGTAAATTCATAGGACTGCTGCTCTCTCTTCTCTGCTGCGTGTCTAGA GGGGACTTATCTTTGTGTGTTTTGTGCTTTCACTTCAAAGATGTCGATGA TTTTCTGTTCCGGTTTCGTGCTTTGCTTACCACAGGATTGAGCTCTACTT CCAGCATAAGGCACAAGCGCTCGGACAGCCGCCGTTCAAGGTTTTCGACA ACTTGCCCCCGATAGTTACAGTTGAGCAAAACTTTGATGAGCTACTGATA CCGCCAGACCACGTCAGTCGACAGCCTTCAGACACCTACTACGTTGACGC CCAACGAGTTCTACGATGCCACACGAGCGCTCACCAAACTTCTCTGTTGC GGCAAGGGGAAGACCGGTTCCTAGTCTGTGGAGATGTTTACAGGCGGGAC GAGGTGGATAGTACGCACTACCCCGTGTTTCATCAGATGGAGGGAGTGCG TATTCTCACCGAGGAAGAGGTGCGTCGGCTTTCGCTCTGGTACGTGTTGC GCGGGAGTTGAAATGCAGCGGAAAATTCGTCACTTTGTTTGTTTCTGCCG GAGCAGCTTGTCCCTTACCCTCTTACCCTTACCCTCCTGAGGAAAACAAA TCTGTTGCAACGCCGATCACTATGGCCAACACGTCGGAGCTCTCAGATGG GTATATTGGTTTATTTTAACCTTGTTACCTATGGTCCACGGCATTTGCTC ACAGGCACCGGCGAGGTGGGACGTCAGCCAGAGAAAGGAAACCGCGAGCA AGGATCTAAAGCGTGGCCTCGAAGGCCTTGCTACGAGTTTGTTCGGGAAT GTGGAAATGCGCTGGGTCGACGCGTACTTTCCTTTCACCACTCCATCTGC TGAATTGGAAATTCTCTTTCGGGTGAGTTGTACTGATGTGCCGACAGGCT AAAGAGTTGCACACTCAGAGAGGAACAGGGTAAGATTTTTGTCACGGTGA TATGGCACTCTAAAACTCTTACCGAACAAGGAGTGAAACGAAACACAAAC AAACTCCTTTGCGCTGTTATTCTATTCAGGACAAGTGTCACGTTCATCTT GACTCATCGCGAGCTTTTGTTTTTTTGCGGGACTTGTTGCCGAACTAAAG AAGGATGCAAATTGCATAGGGGCTATTACGGGTAGATGAAATGTCGTATC TTAGGACTGACAGAATTGGGCGGGCGCCCACTACTGTAGGGCGAGTGAAT CGACCTGGCAAATACTCGCCGTATAAAGGACCCCGACTGTACGATGTTTT TGCCTACTAAAACTGCTGCACACCATGTCGCGTGCTGTTTGCCATATAGG GGAAGTGGATGGAGGTTTTGGGTTGCGGGGTGATCCACGATGAGGTTATG GACAACGCTGGCAGGAAAGGCGAAATTGGATGGGCTTTCGGGCTAGGCCT TGAGCGGCTCGCCATGGTGCTGTTTTCGATCCCAGATATTCGTCTTTTCT GGTCTGAAGACCCCAGGTTCTCGTCCCAGTTTAAGGTGAGAAGACCGCAT CCATGGTCGACTCGAAGAGATGCTTGACACCCACGTGGGACAATAAGACA CGGCTTGCCAAGTCGCGGAGTCCTTCCTACCTGTCACCCCTTCCATCTGA GTGACAAGTTGCGCATGCCGCGCGTGTCCGACCTAATGAGTCTTGCTGCT TTTTCGAGCCTCAATGGGTCTTTCACAGCCATTCACAAGTTTCACGGGAC TTCGGGGGGGGATCGAATGCAGACACCACATTCTGCTTTTATCTCTCATC CGCCGTTTCTGAACGGGTTCGAAACTATCTACCCAACACCAAGTTCGTCC CTCTGTCCTTGTTTTGTCCATCTCGTCACAGGCTAAAACGCTCACGACGT TCCAGCCATACAGCAAGTACCCACCGTGCTACAAGGATGTGACCTTTTGG CTTCCTGAAGATAACTTCCACAACAACGACCTCTTCGAGGTTGTGCGGGA CGTGGCAGGAGATCTTGTCGAGGAGGTAACTGCTCGTTGCCATGTGTTCT AGCCGTTACCGTTAGGTGATCGCACGTTGCATTGCGCTGCGAAATCAGCC AAGATATCCTAGAATAGCACAAAAGAGCTAGGTCCGATCACATCTGAAAT GTTGCCTGTAAAATTTTCTCCTGACCGCTTCAGATCCGATTGCTGGACGA CTTCACCCACCCGAAGACCCAGCGGAAGAGCAGATGCTTTCGCATTACAT ACCGGTCCATGGATCGATCACTCACGAACGAGGAGATAGATCGGCTACAA GAAGTTGTGCGCGGCTACATCACTACCCGTCTGGATGCGGAGCTACGATA G
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig988:18158..20908+

>mRNA_E_fasciculatus_S2_contig988.17878.1 ID=mRNA_E_fasciculatus_S2_contig988.17878.1|Name=mRNA_E_fasciculatus_S2_contig988.17878.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1197bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig988:18158..20908+ (Ectocarpus fasciculatus EfasUO2)
ATGCTAGCCACCTGCTTCAGGAGGACTGGGCCCACTGCGCGGGCAGGGGT
CTTCAGAGGTTTGCACCTTGGTGCGCCTAATCCAGGTTCGGTGATCAACG
ACCATGCTTACAACAATGTCTCTCCATCTGTGGCAGCGAAGATCGGTAAA
GACCTGCATCGGTGCTCTGCGCACCCACTTGGCATCATCAAGGAGAGGAT
TGAGCTCTACTTCCAGCATAAGGCACAAGCGCTCGGACAGCCGCCGTTCA
AGGTTTTCGACAACTTGCCCCCGATAGTTACAGTTGAGCAAAACTTTGAT
GAGCTACTGATACCGCCAGACCACGTCAGTCGACAGCCTTCAGACACCTA
CTACGTTGACGCCCAACGAGTTCTACGATGCCACACGAGCGCTCACCAAA
CTTCTCTGTTGCGGCAAGGGGAAGACCGGTTCCTAGTCTGTGGAGATGTT
TACAGGCGGGACGAGGTGGATAGTACGCACTACCCCGTGTTTCATCAGAT
GGAGGGAGTGCGTATTCTCACCGAGGAAGAGGCACCGGCGAGGTGGGACG
TCAGCCAGAGAAAGGAAACCGCGAGCAAGGATCTAAAGCGTGGCCTCGAA
GGCCTTGCTACGAGTTTGTTCGGGAATGTGGAAATGCGCTGGGTCGACGC
GTACTTTCCTTTCACCACTCCATCTGCTGAATTGGAAATTCTCTTTCGGG
GGAAGTGGATGGAGGTTTTGGGTTGCGGGGTGATCCACGATGAGGTTATG
GACAACGCTGGCAGGAAAGGCGAAATTGGATGGGCTTTCGGGCTAGGCCT
TGAGCGGCTCGCCATGGTGCTGTTTTCGATCCCAGATATTCGTCTTTTCT
GGTCTGAAGACCCCAGGTTCTCGTCCCAGTTTAAGGCTAAAACGCTCACG
ACGTTCCAGCCATACAGCAAGTACCCACCGTGCTACAAGGATGTGACCTT
TTGGCTTCCTGAAGATAACTTCCACAACAACGACCTCTTCGAGGTTGTGC
GGGACGTGGCAGGAGATCTTGTCGAGGAGATCCGATTGCTGGACGACTTC
ACCCACCCGAAGACCCAGCGGAAGAGCAGATGCTTTCGCATTACATACCG
GTCCATGGATCGATCACTCACGAACGAGGAGATAGATCGGCTACAAGAAG
TTGTGCGCGGCTACATCACTACCCGTCTGGATGCGGAGCTACGATAG
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