mRNA_E_fasciculatus_S2_contig9876.17876.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9876.17876.1
Unique NamemRNA_E_fasciculatus_S2_contig9876.17876.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: CobW (C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ2_9PHAE)

HSP 1 Score: 556 bits (1432), Expect = 2.510e-193
Identity = 304/367 (82.83%), Postives = 314/367 (85.56%), Query Frame = 1
Query:    1 RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKGGNLRTASS-----SSXXXDRNKSRSVS----GGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIGVGMDRAGVLSTLEGLRVDGWGGXXXXXXXXXXXXXXXDGGSAEREKETERLMRILKDDPLFDAVPREAAPACAQNVVRFR 1074
            RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAG  GQG AGGMLVSMRHQL SADV+LLNKADLLDDQRLSKLT++V S+NPAARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKGGNLRTASS     SS   DRNKSRSVS    GG G GHECSA       KTEAPQGHLRDDGLEQ TFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDG WQGPMSLYLVVIGVGMDR GVLS LEGLRVD   G                GGSAE EKETERLMRIL++DPLFD+V  EA P+CA++VVRFR
Sbjct:  117 RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAG--GQGGAGGMLVSMRHQLMSADVILLNKADLLDDQRLSKLTQEVTSINPAARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKGGNLRTASSLASSPSSSRHDRNKSRSVSPSVAGGGGAGHECSAEGSAEVGKTEAPQGHLRDDGLEQVTFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGMWQGPMSLYLVVIGVGMDRVGVLSALEGLRVDTSSGAGSERNCVG-------GGSAELEKETERLMRILEEDPLFDSVSCEATPSCAKHVVRFR 474          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM2_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 5.020e-150
Identity = 250/358 (69.83%), Postives = 262/358 (73.18%), Query Frame = 1
Query:    1 RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKGGNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIGVGMDRAGVLSTLEGLRVDGWGGXXXXXXXXXXXXXXXDGGSAEREKETERLMRILKDDPLFDAVPREAAPACAQNVVRFR 1074
            RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQG AGGMLVSMRHQLESADV+LLNKADLLDDQRLSKLTE+VASVNPAARVE CSYGKVPLHSVLDVEAPRTDIQGVSHE                                         + SA    G+ +      H RD     A+         +RFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDG WQGPMSL+LVVIGVGMDRAGVLS LEGLRVD   G                 GSAE EKETER+ RIL+DDPLFD VPREA P+CAQ+VVRFR
Sbjct:  117 RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGGAGGMLVSMRHQLESADVILLNKADLLDDQRLSKLTEEVASVNPAARVEFCSYGKVPLHSVLDVEAPRTDIQGVSHEAAVAAT-----------------------------------DTSARRRWGRRR------HRRDTCGTTAS---------SRFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGVWQGPMSLHLVVIGVGMDRAGVLSALEGLRVDTSSGAGSERHCDGR-------GSAELEKETERMTRILEDDPLFDPVPREATPSCAQHVVRFR 417          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: CobW (C-terminal domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J2H4_PLABS)

HSP 1 Score: 157 bits (396), Expect = 1.640e-39
Identity = 107/293 (36.52%), Postives = 151/293 (51.54%), Query Frame = 1
Query:    7 DYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAP-RTDIQGVSHERVKVH---LSVSSKGGNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIGVGMDRAGVLSTLE 873
            D ++IETSGV+DP  I+  L++ +G +TR RLD VVTVVD+D LS +L         G +     +   QL +ADVV++NKADLLDD + S +   V  + P  R    ++G VPLH +LD+E       Q V+HE  ++    L++SS GG LR         DR  +  V                    T +P     DD ++   F S+ PL LA FQDW+ H MP+ V R+KG L FD +R T    ++SG RR        WQGP  + L  I   +D + + S+L+
Sbjct:  175 DAIIIETSGVTDPVHIIARLERRYGPMTRCRLDCVVTVVDSDVLSERLSS-------GSSATRSWTQERQLLAADVVVVNKADLLDDDQASAVERYVREMVPGVRTLRATFGNVPLHDLLDIERDVNPSGQVVAHESGRLAQRPLAMSSAGGALRRT-------DRVPAAQV-------------------PTRSP---TADDNMQSFVFESNDPLRLAAFQDWLHHQMPSNVARMKGFLWFDFERSTFREVHLSGNRRYHVGAPDVWQGPPRVSLAFIAGSLDVSAIASSLQ 431          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: CobW (C-terminal domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VTK7_AMPQE)

HSP 1 Score: 149 bits (376), Expect = 4.930e-37
Identity = 108/292 (36.99%), Postives = 148/292 (50.68%), Query Frame = 1
Query:    1 RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKGGNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFET-DGEWQGPMSLYLVVIGVGMDRAGVLSTLE 873
            + DYLV+ETSGVSDP   + AL++ +G++ R RLD VVTVVD D LS +L++        D+    V+   QL+ ADVVLLNK DL+ ++ L  +   ++S+ P   +  C YG VPLH +L+V       Q VSHER     ++S+ GG    A          K R +SG     H        GK        HL  D  +   F SS P SL+ FQ ++ +G P GV R+KG + F E R     F+MSGR R      +    GP  + LV IG   +   V  +LE
Sbjct:  111 KIDYLVVETSGVSDPLQTISALEEEYGQMYRVRLDVVVTVVDTDYLSSRLKD--------DSLSRSVAADSQLKCADVVLLNKRDLVSEEDLEMVKSYLSSLVPGVSIYPCRYGAVPLHWILEVSEVPKGPQLVSHERTSSAYTISAVGGVKNVA---------RKGRDLSG-----H--------GKN-------HLSADEFQSIVFESSSPFSLSLFQGFLGNGFPEGVARMKGTVWFSEARSCLYSFHMSGRNRYEITPQETGLGGPPKVELVAIGKSGNMDRVFKSLE 365          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: CobW (C-terminal domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPY0_PHYSP)

HSP 1 Score: 145 bits (367), Expect = 1.280e-35
Identity = 105/281 (37.37%), Postives = 141/281 (50.18%), Query Frame = 1
Query:    7 DYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAPRTDI--QGVSHERVKV--HLSVSSKGGNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIGV 837
            DYLV+ETSG +DP  +V A+ + FGK+TRARLDSVVTVVD DA++       G           V++R QL+ ADVVLLNK DL+D+ +L      V    P ARV    +G+V L  VLD+ AP  D+   GVSHE+V+   +  +S+  G + T + S    DR    +V                 K +   P             +  + P SLA   DW+ H +P G +R KGV+   E    R V  +SG+RRL  E  G WQ       VVIG+
Sbjct:  125 DYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGDAVAQDAANGVGP--------CAVAIR-QLQCADVVLLNKVDLMDEDKLQAARRVVQKYAPCARVYETDHGQVYLPHVLDI-APPEDVFNGGVSHEKVEAQWNTGLSALNGAV-TPAPSRLRVDRGSEVAV-----------------KQEVNTPS-----QAFASVAYERTAPTSLAAVHDWIQHHLPKGTLRAKGVMYIAELPKYRFVVQLSGKRRLEVENAGAWQSTPKTQFVVIGL 372          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: CobW (C-terminal domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CJ29_PHYNI)

HSP 1 Score: 142 bits (359), Expect = 1.630e-34
Identity = 111/305 (36.39%), Postives = 147/305 (48.20%), Query Frame = 1
Query:    7 DYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALS----HQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAPRTDI--QGVSHERVKV--HLSVSSKGGNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIGVG--------MDRAGVLSTLE 873
            DYLV+ETSG +DP  +V A+ + FGK+TRARLDSVVTVVD DA++    H +E  A            V++R QL  ADVVLLNK DLLD+ +L    + +    P+ARV    +G+V L  VLD+ AP  D+   GVSHE+V+   +  +S+  G +  ASS      R++                         E P             F  + P  LA   DW+ H +P G +R KGV+   E    R V  +SG+RRL  E  G WQ       VVIG           D A  L +LE
Sbjct:  126 DYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVVDGDAVAQDALHGVEPCA------------VAVR-QLRCADVVLLNKVDLLDETKLKTARQVIEKYAPSARVYETDHGQVYLPHVLDI-APPEDVFNGGVSHEKVQAQWNTGLSALNGAVTPASSRLRVERRSE---------------------VALNEVPP----SQAFXSVAFERTEPTPLAAVHDWIQHHLPHGTLRAKGVMYISELPKYRFVVQLSGKRRLEVENAGVWQSTPKTQFVVIGFSSRSSDGEQFDEAQALESLE 391          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: Aste57867_3490 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDR1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.420e-34
Identity = 100/293 (34.13%), Postives = 138/293 (47.10%), Query Frame = 1
Query:    7 DYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPA-ARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKGGNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGH-LRDDGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIGVGMDRAGVLSTLEGL 879
            DYLV+ETSG +DP ++++A+   FGK+TRARLDSVVTVVDA+AL                  +    ++QL+ ADVVLLNK DLL  +R +     V    P  A V   ++  V L  +LD+  P      VSHE V+ H + S      RTA++                                    P  + +  D      F S  P++LA    +V   +P GV+R KG+L  D+D   R VF +SG++R+   T G W    S  L VIG G D A V + L+ L
Sbjct:  122 DYLVVETSGTTDPLALIQAIQARFGKMTRARLDSVVTVVDAEALVES--------------DLCAVAKNQLQCADVVLLNKMDLLAPERHATARAAVQEFAPVGAHVYETTFCDVYLPRILDISPPDGIYNAVSHESVQAHWNTSPLSTLRRTAAT------------------------------------PDAYAVARDTWSTDVFESKTPIALAALHAYVASRLPPGVLRAKGILYLDDDPTNRYVFQLSGKQRIQVTTTGPWPCAPSTQLAVIGTGFDMAAVRADLQSL 364          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: CobW (C-terminal domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UBR7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.860e-34
Identity = 99/286 (34.62%), Postives = 144/286 (50.35%), Query Frame = 1
Query:    7 DYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAPRTDI--QGVSHERVKV--HLSVSSKGGNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSL------PLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIG 834
            DYLV+ETSG +DP  +V A+ + FGK+TRARLDSVVTV+D DA++    +        D     V++R QL  ADVVLLNK DLLD ++L    + +    P+AR+    +G+V L  VLD+ AP  D+   GV+HE V+   +  +S+  G +  A S                              + + E     +++D ++     +S+      P++LA   DW+ H +P G +R KGV+   E    R V  +SG+RRL  E  G WQ       VVIG
Sbjct:   37 DYLVMETSGTTDPTQLVAAVQEKFGKMTRARLDSVVTVMDGDAVAQDAAK--------DVEPCAVAVR-QLRCADVVLLNKVDLLDAEQLQTARKVIEKYAPSARIYETDHGQVYLPHVLDI-APPEDVFNGGVTHENVQARWNTGLSALNGAVTPAPS------------------------------RLRVEKGSDVVKNDDVQSTQAFASVAYERTEPIALAAAHDWIQHHLPPGTLRAKGVMYIAELPKYRFVVQLSGKRRLEVENAGVWQSTPKTQFVVIG 282          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: Cobalamin ((Vitamin B12) biosynthesis CobW n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYP9_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.190e-33
Identity = 105/292 (35.96%), Postives = 146/292 (50.00%), Query Frame = 1
Query:    7 DYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSM--------------RHQLESADVVLLNKADLLDDQR-LSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKGGNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSLPLSLARFQDWVCHGMPA-GVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIG 834
            DYLVIETSGV+DPE I++ALD+ FGK+TRARLDSVVT+VDAD L  +L ++  A    D  G  +S               R Q+E ADV++LNK DL+ D   L  L   +  +NP AR+    +  +PL  VLDVE P      ++HE     L  + K   LR+  S +      K+   +G +      +A ++  ++       HL  +G+   TF S  P  L + Q +  H  PA  V+R KG L   E    R   ++SGRRR     +G W       +V IG
Sbjct:  142 DYLVIETSGVTDPERIIQALDEKFGKMTRARLDSVVTMVDADVLHAELVDSTPA--VRDTRGATLSAHVPSASHPGIPPTRRRQIECADVIILNKTDLVKDLAYLDDLEAFLRKLNPLARIHRTRFADLPLPCVLDVELPDLGAGSMTHEESNA-LYATRKVSTLRSEPSQAVSSRARKTDLFTGAA-----TAASDQNSRS-------HLVSEGISAFTFESKSPFLLRKLQRFFSHVFPAEAVIRSKGFLYVRELAGRRVALSISGRRRFHLSDEGTWSSAPGTQVVFIG 418          
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Match: CobW (C-terminal domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXQ5_GLOUD)

HSP 1 Score: 138 bits (347), Expect = 6.550e-33
Identity = 96/280 (34.29%), Postives = 134/280 (47.86%), Query Frame = 1
Query:    1 RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQLEEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVASVNPAARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKG--GNLRTASSSSXXXDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRDDGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVFNMSGRRRLSFETDGEWQGPMSLYLVVIG 834
            ++DYLV+ETSG  DP  +V A+ + FGK+TRARLDSVV VVD DA++    +            + +S   QL  ADVV+LNK DL+DD   ++    ++   P ARV    + ++ L  VLD+  P      VSHE V+ H + +S G  G LR   SSS     N S + SG                            D      +  S P  LA    W+   +P GV+R KG++   +D  +R V  MSG++R+  E  G W+       VVIG
Sbjct:  121 QFDYLVMETSGTMDPTQLVAAVQEKFGKMTRARLDSVVVVVDGDAMAQDALQGV------SPCDVAIS---QLACADVVVLNKIDLMDDAAKARAKSVISEYAPLARVYETDHCQIYLPHVLDISPPEDIYNAVSHEHVQAHWNTASDGALGKLRLLDSSSSS---NISVASSG---------------------------SDAFASVAYEQSTPTPLAAVHCWLRSHLPQGVLRAKGIIYLADDPKSRYVVQMSGKKRIEVENAGPWRAAPKTQFVVIG 361          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9876.17876.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
CobW2.510e-19382.83C-terminal domain-containing protein n=1 Tax=Ectoc... [more]
Uncharacterized5.020e-15069.83protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
CobW1.640e-3936.52C-terminal domain-containing protein n=1 Tax=Plasm... [more]
CobW4.930e-3736.99C-terminal domain-containing protein n=1 Tax=Amphi... [more]
CobW1.280e-3537.37C-terminal domain-containing protein n=3 Tax=Phyto... [more]
CobW1.630e-3436.39C-terminal domain-containing protein n=13 Tax=Phyt... [more]
Aste57867_34902.420e-3434.13protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
CobW4.860e-3434.62C-terminal domain-containing protein (Fragment) n=... [more]
Cobalamin3.190e-3335.96(Vitamin B12) biosynthesis CobW n=1 Tax=Nannochlor... [more]
CobW6.550e-3334.29C-terminal domain-containing protein n=1 Tax=Globi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9876contigE_fasciculatus_S2_contig9876:3..4170 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score443.0
Seed ortholog evalue1.4e-121
Seed eggNOG ortholog2880.D8LTM2
Model size1074
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.ATP binding
EggNOG OGsCOG0523@1,KOG2743@2759
Cds size1074
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9876.17876.1prot_E_fasciculatus_S2_contig9876.17876.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9876 3..4170 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842630.438744-CDS-E_fasciculatus_S2_contig9876:2..1501696842630.438744-CDS-E_fasciculatus_S2_contig9876:2..150Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9876 3..150 -
1696842630.4507556-CDS-E_fasciculatus_S2_contig9876:498..6841696842630.4507556-CDS-E_fasciculatus_S2_contig9876:498..684Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9876 499..684 -
1696842630.4604044-CDS-E_fasciculatus_S2_contig9876:1086..11731696842630.4604044-CDS-E_fasciculatus_S2_contig9876:1086..1173Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9876 1087..1173 -
1696842630.4709835-CDS-E_fasciculatus_S2_contig9876:1597..18391696842630.4709835-CDS-E_fasciculatus_S2_contig9876:1597..1839Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9876 1598..1839 -
1696842630.4838884-CDS-E_fasciculatus_S2_contig9876:2685..28241696842630.4838884-CDS-E_fasciculatus_S2_contig9876:2685..2824Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9876 2686..2824 -
1696842630.4947307-CDS-E_fasciculatus_S2_contig9876:3210..33841696842630.4947307-CDS-E_fasciculatus_S2_contig9876:3210..3384Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9876 3211..3384 -
1696842630.5056229-CDS-E_fasciculatus_S2_contig9876:4072..41701696842630.5056229-CDS-E_fasciculatus_S2_contig9876:4072..4170Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9876 4073..4170 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9876.17876.1

>prot_E_fasciculatus_S2_contig9876.17876.1 ID=prot_E_fasciculatus_S2_contig9876.17876.1|Name=mRNA_E_fasciculatus_S2_contig9876.17876.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=358bp
RYDYLVIETSGVSDPESIVRALDKTFGKLTRARLDSVVTVVDADALSHQL
EEAAGAGGQGDAGGMLVSMRHQLESADVVLLNKADLLDDQRLSKLTEKVA
SVNPAARVECCSYGKVPLHSVLDVEAPRTDIQGVSHERVKVHLSVSSKGG
NLRTASSSSSKNDRNKSRSVSGGSGDGHECSAGEEGGKTKTEAPQGHLRD
DGLEQATFTSSLPLSLARFQDWVCHGMPAGVVRVKGVLAFDEDRLTRSVF
NMSGRRRLSFETDGEWQGPMSLYLVVIGVGMDRAGVLSTLEGLRVDGWGG
GGGGGGGGGSEKDCDDGGSAEREKETERLMRILKDDPLFDAVPREAAPAC
AQNVVRFR
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mRNA from alignment at E_fasciculatus_S2_contig9876:3..4170-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9876.17876.1 ID=mRNA_E_fasciculatus_S2_contig9876.17876.1|Name=mRNA_E_fasciculatus_S2_contig9876.17876.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4168bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9876:3..4170- (Ectocarpus fasciculatus EfasUO2)
AGGTACGACTACCTCGTGATCGAGACCAGCGGCGTTTCGGACCCAGAGTC GATCGTAAGGGCACTGGACAAGACCTTCGGAAAGCTAACCAGGGCAAGGT GGGTCGTTGGTGTCGCATGTCTGTCTGTCTATGACACGTTATCTCCTCAG TGCATCTTCAATGTACCGCTGTAGTATGACATTATTTTTTTTTCTTTTTG TGGGCGTTTTCGAAGGCCCTTCGTTTTAACGAGTCGTCGTTCGTTGTTTT GAGAAGATTTTTTGTTCAGTGGGCTGCTTCGAAGGCCTTCGGTGGTACGG TAGAACGACTTCGAAGGCCTTCATTCGTTCGTTCGTTGTACACGGTCACC CGATCGCCGCAGCAGTCACATGTATTCCGCCCGGACGCGCTCGAGAAAAT CGCCAGGCCCGGCCTCCGGCGGCACGGAGTGAGGCTTATCCATGCCTACG GCAGCTCTCATCCGAAAGAGTGCGGTCTTGGTTGCTGCTGTGCATGCCTT GATTCCCCCAACGGGCTGCTGCTGCTGCTGAATCGACGGGCGGGACGGAC GGAATTTTGTCCTACCGCGTTCGCGAGTGTTTAATTAATTGGTATTATGT TAATCTGCTTCAGAAGTATGAAATAGAGAGGGGGAGTTCGCATCCCTAAC CCTACCCCGTACCCCCTACTATATATATAGTAGATGCAAGCTTAAGATCC TCGCGAAAATCTACTTTTTGTTCGGGGGGGAGGGTTGGATGACCCATGCC GAAGAAATGCACTGATTGATTGTAGTGCGCCCACAGGTTAGACTCTGTCG TGACTGTCGTCGATGCGGACGCGCTGTCCCACCAACTGGAGGAGGCGGCA GGGGCGGGGGGGCAGGGGGACGCAGGAGGCATGCTGGTCTCCATGAGACA CCAGCTAGAGAGCGCTGACGTCGTCCTCCTCAACAAGGCCGACTTACTCG ACGATCAACGGTACGGTACGGTACGGTGTGGTGTGGTGTGGTACGGTAGG AAAGGGTAGGGTAGTGTAGGGTTAAGACGAACGAGCCGGTGAACTGGTCC GCTGCTGAGCGACGTCAGTTGATCTCCCTTGTTGTTGTACGTTGCCGAAG TGGATCGATCGCGTCATTGCATTGCTTTTGCAGCAGGCACCAGCAGGCAC CAGTAGGCACCAGTAGGCACCAGTCTGGTTTCTCCGTAAAATGACACTCC TCCTACTTGTTACGCACAATACCCGTGCACGCTCTCTTTCTTCTGTGCTG TGTTAAATAGCGTGGTGCTCCCACCCGCATGTATACCGACTCTGTGTCAC CGTCGTCCGTACGCATGCTTCACCGCTGGCCCTATTGGAAAGGAAGGTTG TCGAAGCTCACCGAAAAGGTCGCGAGCGTCAACCCCGCCGCCCGAGTGGA GTGCTGCTCCTACGGCAAGGTGCCCCTGCACTCGGTGCTGGACGTGGAGG CCCCGCGGACAGACATACAGGGGGTCTCCCACGAGGTGCGCCCGGAGAGC CGTCATTTCGGAAGGGGCCGCCACTCCCGGTGTTGTGATAATTGTGCTCA GGTTCTCTTATTATCTATTGTCTTGTGTGTGGTGAGAGGGGCATAAACCT CCTATATGCTTACAAAGATTCTCCAAGACTGTTGTCTTATGGTTGGAGAG GTTTGTTTTATGCGCCTCTTCGACACGTGCAGGGCTTGGCTGAACGGCGC CCAGTTGCGTTGTCGGTGTGTGTTTGCTGCGGGCTGTTGTCGAAGTGCCT CCATGGGGCTGGTGTGCTGCTCATCCGACGTGTTTGCTAGTGCTGCTGCT GATGATGATAATAATTTTGTCGTAGTTTCGCGTACATCTCATCGTAGGCC CTCTATAAGACGGGTTACCGTAGGTGACACATGATACCACACCCCCTGGA CAGATTTTCAGAGTTCGACAACTCTACGACGAAGACGATGCCAACATCAA ATGATATGTTGTCGGAAAGATCTCGATGAGACGGTCGCAACGCCACCGTT TTCTGGCGCCTCCTCTTTTTCTACTGCGGAGTAATCGAGCTTTGAAAATC GGTCCAGGGGGTGTGGTATCTTGGTATGTAAGGCGGTGCCCTAAGTCAGG CGGTTAAGATTGGCTGGCACAGAGGGAATAATCAAGGTGTTCTACACATT AAATAAGGCGGGTGCCCTGTACAGGGCGGGTGAATCGGTCTTATAAAAGG CGCATATCCGCCTTGCAGAGGGCCTACGACTGTACCCCATTAGTCATATG CCCACATCAAGTCTGACGAAAGCCTTCCGATGCTCTCGTTACGCCCCGAA CTTAACGACACACGACGGCTGGCAAGAGAAGAGAGTGAAAGTCCACCTGA GCGTCTCCTCCAAGGGTGGAAACCTGCGAACGGCATCATCGTCGTCTTCA AAGAACGATCGGAACAAGTCACGCTCCGTCTCAGGCGGTAGTGGTGACGG ACACGAGTGCTCGGCGGGGGAGGAGGGAGGAAAGACGAAGACGGAGGCGC CGCAGGGACACTTGCGAGACGACGGTCTCGAGCAGGCCACCTTCACGTCT AGCCTTCCGCTGTCGCTCGCGAGGTATAGTGCTGTAGAGAAGAGAGACCA CGGGAGCCGTCAGTTTGAGGTGTTGAGCCGAATTGCGGTGTTTTGAGAGT TGGGGTGCCAACACGCCAAGAAAAAAAGGGGTGTGTAGTCTATGATCGCT TGCTAACATGTGGGTGTTATTTTTGGTGAGTGTACATGTAGTCATGTGTA TTGTTGTTTTTGGGGGGGGAACATACCAGGGAAGGGCAGGGTAGCGTTTT TTTGCACAAGGGGGTGCTTTTGTTTTGTCCGTGGGGCGAGTTGAGCCTCT CCCGACTTCGTTCTTCGCGACATCGTAAGGGAGAGTGGTGGTGGAAAAGA ACAAAAGCTCGTGCATGTTTGTGTCCGAGGAATATTTCTCCGACTCGTGA CTCGCCTGGTCATCCCTGTCCTTAAACTGCGTGTTTTCCGGCGTAAGGTT CCAGGATTGGGTTTGCCATGGTATGCCGGCGGGCGTGGTGCGGGTGAAGG GGGTGCTGGCCTTCGACGAGGACAGGCTGACTAGGTAAAGGTAAAGGTTT GACTGGCTGATTGCCGACCCCAGCCTAGCTTTTATTCTGCCGTTTGGGCC TCTCCTCCAACCGAAACACGTGTCTTAAAGTGACCCACCCCGTCGTGGTG TAGCCAAAGCTCAGGCAAAGAGCCACCTACTTACCCTCTCCTCAGATCTA CGGTCGAACCCGCGCCTCCGTGCGCGTATCTCGCAGAGGGGGCGTGTTCG CCTTGTCCTTCCAACACCGGTCGGCAGGGGGACAAGTGATCTTGTTTGTC CTCTGCGACTGACTCTATGATAACTACCCAAGTGGTCTTACTGCTCGATG AAACTCGAGACGATTTTAGCCTCCATCTACCCCCCCCCACCCCCCCCATT GACGTCACGTCCGCGCTGATTTGTCGTCGCGAAAAGGTCGGTTTTTAACA TGAGCGGGAGGCGGCGTCTTTCCTTCGAAACCGACGGCGAGTGGCAAGGA CCAATGAGCCTTTACCTCGTTGTTATAGGGGTGGGGATGGACCGCGCCGG GGTGTTGTCCACCTTGGAAGGCTTGCGCGTCGACGGTTGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGTTGCGGCATTTGGCCCTGCTTTGTTGG GCGGCACTTGTTGCTGTTGAGATGTTCCGCATTCCGTGCGCGTGTGTGGA GTTTGCAGGAGGGGTTATGTTGGAGGCGACAGCAGTGTTGTATTTCATAG ATGAGGTAGTAGCAGTTGAGAACACGTGGAGATGGGGACAAGCGTTGAGC GTGAGAACGTTGGTCGGTTGACGCCCCATCTAAGTGTAGCTTCACGCGGG ATCCGCTCTCAGGGCGTCTGGACTGCTGCTGCTGCTGGTGTTGGTGTTGA TATTCATGTTGTCGCTCTTGTTTGTGTGTTTCTTTGCCTTTGCCTCCGAA TCGTCTAAATCTCTGGCAAGTTCGGAGAAGGACTGCGACGACGGTGGTTC GGCCGAGCGTGAGAAGGAAACCGAGCGACTGATGAGAATACTGAAGGACG ATCCTCTCTTCGACGCCGTTCCTCGTGAGGCTGCGCCAGCGTGCGCCCAG AACGTCGTGCGCTTTCGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9876:3..4170-

>mRNA_E_fasciculatus_S2_contig9876.17876.1 ID=mRNA_E_fasciculatus_S2_contig9876.17876.1|Name=mRNA_E_fasciculatus_S2_contig9876.17876.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1074bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9876:3..4170- (Ectocarpus fasciculatus EfasUO2)
AGGTACGACTACCTCGTGATCGAGACCAGCGGCGTTTCGGACCCAGAGTC
GATCGTAAGGGCACTGGACAAGACCTTCGGAAAGCTAACCAGGGCAAGGT
TAGACTCTGTCGTGACTGTCGTCGATGCGGACGCGCTGTCCCACCAACTG
GAGGAGGCGGCAGGGGCGGGGGGGCAGGGGGACGCAGGAGGCATGCTGGT
CTCCATGAGACACCAGCTAGAGAGCGCTGACGTCGTCCTCCTCAACAAGG
CCGACTTACTCGACGATCAACGGTTGTCGAAGCTCACCGAAAAGGTCGCG
AGCGTCAACCCCGCCGCCCGAGTGGAGTGCTGCTCCTACGGCAAGGTGCC
CCTGCACTCGGTGCTGGACGTGGAGGCCCCGCGGACAGACATACAGGGGG
TCTCCCACGAGAGAGTGAAAGTCCACCTGAGCGTCTCCTCCAAGGGTGGA
AACCTGCGAACGGCATCATCGTCGTCTTCAAAGAACGATCGGAACAAGTC
ACGCTCCGTCTCAGGCGGTAGTGGTGACGGACACGAGTGCTCGGCGGGGG
AGGAGGGAGGAAAGACGAAGACGGAGGCGCCGCAGGGACACTTGCGAGAC
GACGGTCTCGAGCAGGCCACCTTCACGTCTAGCCTTCCGCTGTCGCTCGC
GAGGTTCCAGGATTGGGTTTGCCATGGTATGCCGGCGGGCGTGGTGCGGG
TGAAGGGGGTGCTGGCCTTCGACGAGGACAGGCTGACTAGGTCGGTTTTT
AACATGAGCGGGAGGCGGCGTCTTTCCTTCGAAACCGACGGCGAGTGGCA
AGGACCAATGAGCCTTTACCTCGTTGTTATAGGGGTGGGGATGGACCGCG
CCGGGGTGTTGTCCACCTTGGAAGGCTTGCGCGTCGACGGTTGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGTTCGGAGAAGGACTGCGACGACGG
TGGTTCGGCCGAGCGTGAGAAGGAAACCGAGCGACTGATGAGAATACTGA
AGGACGATCCTCTCTTCGACGCCGTTCCTCGTGAGGCTGCGCCAGCGTGC
GCCCAGAACGTCGTGCGCTTTCGC
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