mRNA_E_fasciculatus_S2_contig987.17867.1 (mRNA) Ectocarpus fasciculatus EfasUO2
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB4_ECTSI) HSP 1 Score: 603 bits (1556), Expect = 1.030e-216 Identity = 300/326 (92.02%), Postives = 306/326 (93.87%), Query Frame = 3 Query: 27 MAGLINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYGE 1004 MAGLINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQC+ERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWL+PGGKLFVHI HKDHPYHF E+G AQYFF G MP + LL HFQ EDLRIEGHWRVNGTHYARTSEAWLSRMDENKEE+MPILG+IYGE Sbjct: 1 MAGLINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCRERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLSPGGKLFVHILKHKDHPYHFFQEEGGRAQYFFWGERMPWEALLFHFQ--------EDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEIMPILGEIYGE 318
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: S-adenosyl-L-methionine-dependent (methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH28_9STRA) HSP 1 Score: 475 bits (1222), Expect = 7.230e-166 Identity = 231/326 (70.86%), Postives = 267/326 (81.90%), Query Frame = 3 Query: 27 MAGLINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHFLHE-DGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYG 1001 MA L+N L++ PYVMP VEKNVVPD +VRFGVRRQC RLQ I+ GT EQ A KEA+++EL+ MPIA Q DAAN QHYEV+AAFY + LGPRLKYSSG WP+ D+TF ESE AMLE YC+RA+L DGM+IVDLGCGWGSLTLFLA +YP A +T+ISNSASQK +ID C ERG NV VITG+IN FDL ++ KG+FDRV SIEMFEHMKNYKLL+AK++GWL GGKLFVHIFVHKDHPYHF E DG+MAQYFF+GGTMPSDDLLL+FQ +DLRIEGHWRVNGTHYARTSEAWL +MD+NK ++P+L IYG Sbjct: 1 MAFLLNKLASMAEPYVMPIVEKNVVPDALVRFGVRRQCADRLQQISAGTPEEQAAAKEAMVKELQSMPIAVQTDAANAQHYEVSAAFYKIVLGPRLKYSSGLWPRPDTTFAESETAMLECYCERAQLADGMRIVDLGCGWGSLTLFLAARYPAARVTAISNSASQKAFIDAACAERGLANVTVITGNINTFDLPDDVKGTFDRVCSIEMFEHMKNYKLLMAKVAGWLRSGGKLFVHIFVHKDHPYHFRAETDGFMAQYFFTGGTMPSDDLLLYFQ--------DDLRIEGHWRVNGTHYARTSEAWLRQMDDNKAALLPLLADIYG 318
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXB9_HETAK) HSP 1 Score: 384 bits (986), Expect = 4.680e-130 Identity = 181/321 (56.39%), Postives = 244/321 (76.01%), Query Frame = 3 Query: 48 LSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFY--HLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYGE 1004 L + ++P +MP VE+N+VPDF++R G+R Q RL ++ GT EQ+ARK+A+I+ELK MPIA ANEQHYEV A FY H+ +GP +KYSSG+WP ++TFEESE ML +Y +R++L+DGMK++DLGCGWGS++L++AE++PN ITS+SNS QK YI+ QC++RG N+ V T DIN F+ K +DRV+SIEMFEHMKNY+ L+ +++ W+APGGKLFVHIF HK HPYHF + GWMAQ FF+GGTMPSDDLL++FQ + L +E HW VNGTHYA+TSEAWL+ +D + +E++P+L + YGE Sbjct: 8 LESYIAPALMPVVERNIVPDFIIRRGIRSQLQDRLNELNEGTLEEQMARKQAMIQELKTMPIAINTKEANEQHYEVPAEFYTKHV-MGPYMKYSSGYWPSPETTFEESETHMLALYAERSELQDGMKLMDLGCGWGSVSLYMAERFPNCQITSVSNSRDQKAYIEDQCQKRGLTNITVYTSDINVFEPPH--KNHYDRVISIEMFEHMKNYQELLKRVASWMAPGGKLFVHIFTHKTHPYHF--DKGWMAQTFFTGGTMPSDDLLMYFQ--------DHLSLEDHWVVNGTHYAKTSEAWLANLDRSAQEVLPLLEKTYGE 315
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: SAM-dependent (methyltransferase n=1 Tax=Spartobacteria bacterium AMD-G4 TaxID=1982325 RepID=A0A2A2XVR3_9BACT) HSP 1 Score: 352 bits (902), Expect = 2.100e-117 Identity = 166/308 (53.90%), Postives = 224/308 (72.73%), Query Frame = 3 Query: 84 VEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHFLHED--GWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYG 1001 + +N++PD +R G+R G +L++ A+ ++ Q I+ELK+ PIA + +ANEQHYEV F+ L LGPR+KYSSG+WP+ D+TF ESE AML + C+RA+L DG +++LGCGWGSLTL++AEKYP + IT +SNSA+QK +ID + +GF N+R++T D+NEF+ G+ SFDRV+S+EMFEHMKNY+LL+AK++ WL GGKLFVHIF H++ YHF +D W+ +YFF GGTMPSDDLLL+FQ +DL I HWRV+GTHY RTSEAWL +MD N+ + PIL YG Sbjct: 8 LSRNLLPDAAIRIGIRNLLGKKLREEAKPDAIAQGEALAVFIDELKRSPIAIKTASANEQHYEVPTDFFKLVLGPRMKYSSGYWPREDTTFAESEEAMLALSCERAQLTDGQDVLELGCGWGSLTLWMAEKYPQSRITGVSNSATQKAHIDAEAVRKGFKNIRILTADMNEFEAGD---ASFDRVVSVEMFEHMKNYQLLMAKVARWLRVGGKLFVHIFTHREFAYHFEGKDPSDWITRYFFEGGTMPSDDLLLYFQ--------DDLAIRNHWRVSGTHYQRTSEAWLEKMDANEAVITPILESTYG 304
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNC6_9STRA) HSP 1 Score: 348 bits (892), Expect = 3.940e-115 Identity = 182/329 (55.32%), Postives = 230/329 (69.91%), Query Frame = 3 Query: 36 LINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGF--GNVRVITGDINEFDLGEED--KGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHFLHEDGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKE--EMMPILGQIYGE 1004 L+N LS + ++ P V+ +VPDF++RFG+R Q + L +A +L K ++ +LK MPIA D ANEQHYEV A FY L LGPR KYSSG WP D+TFEESEVAMLE YC A +EDGM IVDLGCGWGSLTL LAE+YPNA IT ISNS SQ+ YI KERG+ GN+ ++T ++++ D G D KG+ DRVM++EMFEHMKNY L+ K++G+L PGGKLFVHIF HKD+ YHF + GWM+ FF+GGTMPSDDLLL+F +IE HWRVNGT+Y +TS WL +D++ + E+ P+L Q YGE Sbjct: 48 LLNVLSNSTESFI-PMVKMGLVPDFLIRFGIRVQLYNHLNVLAADNVETELKNKTEIVHKLKTMPIAIATDEANEQHYEVPAKFYDLCLGPRKKYSSGLWPNKDTTFEESEVAMLEHYCQLAGVEDGMSIVDLGCGWGSLTLHLAERYPNAKITGISNSHSQREYILNTAKERGYNVGNITIVTCNVSD-DKGALDVVKGN-DRVMTVEMFEHMKNYDHLMEKVNGFLKPGGKLFVHIFTHKDYTYHF--DKGWMSDNFFTGGTMPSDDLLLYFA--------NHFKIENHWRVNGTNYEKTSNGWLDYLDKSWKSGELKPVLAQAYGE 363
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJN1_CHABU) HSP 1 Score: 345 bits (886), Expect = 1.160e-114 Identity = 173/308 (56.17%), Postives = 214/308 (69.48%), Query Frame = 3 Query: 84 VEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHFL--HEDGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYG 1001 +E NV+PD + R VR G RL + + T EQ+ IE LK+MPIA ANEQHYEV FY L LG LKYS+ ++P ++ +E+E AML MYC+RA+LEDG +VDLGCGWGSLTLF+AE+YPN+ IT+ISNSA+Q+ YI+ +C R NVRVIT DIN+ ++ E+ FDRV+SIEMFEHMKNY+ L+ KIS WL P G LFVHIF HK+ PYHF + WMA+YFF+GGTMPSD+LL +FQ EDL I HWRVNG HYARTSE WL + D N E+ PIL + YG Sbjct: 20 METNVLPDQITRRAVRWLVGQRLNSLYKSTGEEQMEELTRFIESLKEMPIAVNTREANEQHYEVPTRFYKLCLGKNLKYSACYFPSEHTSLDEAEDAMLRMYCERAQLEDGQSVVDLGCGWGSLTLFVAERYPNSKITAISNSATQRAYIEEECTNRALENVRVITADINDLEIAEQ----FDRVVSIEMFEHMKNYQKLLRKISTWLKPQGMLFVHIFTHKEAPYHFEVDSDSDWMAKYFFTGGTMPSDNLLTYFQ--------EDLSIVRHWRVNGKHYARTSEEWLKKFDANIAEIRPILAETYG 315
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: Class (I SAM-dependent methyltransferase n=1 Tax=Phragmitibacter flavus TaxID=2576071 RepID=A0A5R8K7G8_9BACT) HSP 1 Score: 342 bits (877), Expect = 1.210e-113 Identity = 170/309 (55.02%), Postives = 226/309 (73.14%), Query Frame = 3 Query: 90 KNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEAL---IEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHF--LHEDGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYG 1001 K+++PD ++RFG+RR+ + L+ R ++ R+EAL +E LK+ P+A D ANEQHYEV FY L LG LKYSSG+WPK+D+TF+ESE ML M C+RA+L DGM I++LGCGWGSL+L++AE YPN+ ITS+SNS +QK +IDG+ +RG N+ + T ++ ++ E G FDRV+S+EMFEHMKNY+ L+ ++S WL PGGKLFVHIF H+D YHF +E+ WMA+YFF+GG MPSDDLLL FQ +DL+IE HWRVNGTHY+RTSEAWLS MD +KEE+ + + YG Sbjct: 10 KDILPDPLLRFGIRRRLDNTLRKHRRP---DEQGRREALRQHVEGLKQSPLAIATDEANEQHYEVPTKFYQLVLGKHLKYSSGYWPKADTTFDESEAIMLGMTCERAELVDGMNILELGCGWGSLSLWMAEHYPNSKITSVSNSRTQKEFIDGEAAKRGLKNLTIRTANMVHYEG--EGAGVFDRVVSVEMFEHMKNYQELLHRVSTWLKPGGKLFVHIFTHRDCSYHFEAQNENDWMAKYFFTGGQMPSDDLLLQFQ--------DDLKIEEHWRVNGTHYSRTSEAWLSNMDSHKEEIRGLFAETYG 305
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: Predicted (protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SDN3_PHYPA) HSP 1 Score: 342 bits (876), Expect = 2.230e-113 Identity = 169/328 (51.52%), Postives = 228/328 (69.51%), Query Frame = 3 Query: 27 MAGLINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHFLH--EDGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYGE 1004 MA LI A A M A++ NV+PD V+RFGVR+ RL +I + T Q+ + ++ LK+MPIA + AN QHYEV FYHL LG RLKYSS ++PK DST +E+E +M +Y +RA+L+DG ++D+GCGWGSL++++AEK+PN+++T +SNS +Q+ +I +C++RG NV +IT D+N F++ DK SFDR++SIEMFEHMKNY+ L+ KIS WL P G LF+HIFVHK PYHF ED WM++ FF+GGTMPS LLL+FQ +D+ I W VNGTHYARTSEAWL +MD + + PI + YGE Sbjct: 1 MASLIKAGRDATLKVSMSALQMNVIPDMVLRFGVRKLLEGRLSEITKSTLEAQMQELLSFVQSLKQMPIAVHMEDANTQHYEVPTEFYHLVLGKRLKYSSAYFPKKDSTLDEAEESMFALYAERAQLQDGQSVLDVGCGWGSLSMYIAEKFPNSNVTGVSNSETQRAFITEECRKRGLSNVTIITCDMNVFNI---DK-SFDRILSIEMFEHMKNYEKLLKKISSWLKPDGLLFIHIFVHKSIPYHFEDKGEDDWMSRNFFTGGTMPSSSLLLYFQ--------DDVSIVNQWFVNGTHYARTSEAWLLKMDAQVKVIRPIFEKTYGE 316
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: Methyltransferase (type 11 n=1 Tax=Chthoniobacter flavus Ellin428 TaxID=497964 RepID=B4D8U6_9BACT) HSP 1 Score: 337 bits (863), Expect = 1.390e-111 Identity = 162/309 (52.43%), Postives = 222/309 (71.84%), Query Frame = 3 Query: 84 VEKNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFDLGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHFLHE--DGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYGE 1004 +E NVVPD ++R G+R L++ G++ E+ AR +A I+ L++ PIA Q AANEQHYEV FY ALG RLKYSSG+WP +T +E+E ML + C+RA+L DG +I++LGCGWGSL+L++AEKYP A IT++SNS +QK +ID + +RG+ N+ +IT D+N FD+ E +FDRV+S+EMFEHMKNY+LL+A+++ WLAPGGKLFVHIF H++ YH+ + WM +YFFSGG MPS D LLHFQ +D+R+E W V+G HY +T+EAWL MD ++ E++PI Q YGE Sbjct: 8 LEANVVPDPLIRLGIRHLLRETLREKGAGSTEERQARLQAHIDGLRRSPIAVQTHAANEQHYEVPTHFYQYALGKRLKYSSGYWPVGVNTLDEAEEKMLALTCERAELADGQRILELGCGWGSLSLWMAEKYPQARITAVSNSRTQKEHIDAEAAQRGWPNLTIITADMNVFDIAE----TFDRVVSVEMFEHMKNYQLLLARVARWLAPGGKLFVHIFTHREIAYHYEDKGPSDWMTRYFFSGGQMPSHDTLLHFQ--------DDVRLETRWTVSGAHYQKTAEAWLQNMDAHRTEILPIFAQTYGE 304
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Match: Cyclopropane-fatty-acyl-phospholipid (synthase n=2 Tax=Verrucomicrobia TaxID=74201 RepID=A0A7W7YF01_9BACT) HSP 1 Score: 334 bits (857), Expect = 1.210e-110 Identity = 157/307 (51.14%), Postives = 225/307 (73.29%), Query Frame = 3 Query: 90 KNVVPDFVVRFGVRRQCGHRLQDIARGTSVEQLARKEALIEELKKMPIATQQDAANEQHYEVNAAFYHLALGPRLKYSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASITSISNSASQKTYIDGQCKERGFGNVRVITGDINEFD-LGEEDKGSFDRVMSIEMFEHMKNYKLLIAKISGWLAPGGKLFVHIFVHKDHPYHF--LHEDGWMAQYFFSGGTMPSDDLLLHFQASEGGDTHEDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEMMPILGQIYG 1001 KN++PD ++R G+R++ L++ + T+ Q A +++LK+MP+A D ANEQHYEV FY L LG LKYSSG+WP ++TF+ESE AML++ C+RA+L+DG +I++LGCGWGSL+L++AE YPNA ITS+SNS +QK +ID + ++RG N+ +IT ++ F +G+ G FDR +S+EMFEHMKNY+ L+ ++S WL P GKLFVHIF H+++ YH+ +D WMA+YFF+GG MPSDDLLL+FQ +DL+IE HW V+G HY++TSEAWL+ MD +K E++P+ + YG Sbjct: 10 KNILPDPMIRLGIRQRLAETLRENKQPTAEAQRAALMRYVQDLKQMPVAIATDEANEQHYEVPTRFYQLVLGKHLKYSSGYWPDENTTFDESEAAMLKLTCERAELQDGQRILELGCGWGSLSLWMAEHYPNAQITSVSNSRTQKLFIDAEAEKRGLKNLTIITANMVHFQGVGD---GIFDRCVSVEMFEHMKNYQELLRRVSTWLKPRGKLFVHIFTHREYAYHYEVRSDDDWMAKYFFTGGQMPSDDLLLYFQ--------DDLKIEDHWCVSGLHYSKTSEAWLANMDAHKAEILPLFAETYG 305 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig987.17867.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig987.17867.1 >prot_E_fasciculatus_S2_contig987.17867.1 ID=prot_E_fasciculatus_S2_contig987.17867.1|Name=mRNA_E_fasciculatus_S2_contig987.17867.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=326bp MAGLINALSTAVSPYVMPAVEKNVVPDFVVRFGVRRQCGHRLQDIARGTSback to top mRNA from alignment at E_fasciculatus_S2_contig987:603..6704- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig987.17867.1 ID=mRNA_E_fasciculatus_S2_contig987.17867.1|Name=mRNA_E_fasciculatus_S2_contig987.17867.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6102bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig987:603..6704- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig987:603..6704- >mRNA_E_fasciculatus_S2_contig987.17867.1 ID=mRNA_E_fasciculatus_S2_contig987.17867.1|Name=mRNA_E_fasciculatus_S2_contig987.17867.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=978bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig987:603..6704- (Ectocarpus fasciculatus EfasUO2)back to top |