Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 129 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 129 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842626.9622862-CDS-E_fasciculatus_S2_contig983:20290..20324 | 1696842626.9622862-CDS-E_fasciculatus_S2_contig983:20290..20324 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig983 20291..20324 - |
| 1696842626.9737227-CDS-E_fasciculatus_S2_contig983:21187..21282 | 1696842626.9737227-CDS-E_fasciculatus_S2_contig983:21187..21282 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig983 21188..21282 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig983.17838.1 >prot_E_fasciculatus_S2_contig983.17838.1 ID=prot_E_fasciculatus_S2_contig983.17838.1|Name=mRNA_E_fasciculatus_S2_contig983.17838.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=43bp
LVLYAREERLAEQSPWRSKHRGKMPPPPGPGSGGRPRRGPWG* back to topmRNA from alignment at E_fasciculatus_S2_contig983:20291..21282- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig983.17838.1 ID=mRNA_E_fasciculatus_S2_contig983.17838.1|Name=mRNA_E_fasciculatus_S2_contig983.17838.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=992bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig983:20291..21282- (Ectocarpus fasciculatus EfasUO2)
CTCGTGCTGTACGCCAGGGAGGAACGCTTGGCGGAACAATCTCCATGGCG
TAGCAAACATCGCGGCAAGATGCCACCCCCGCCAGGACCGGGCAGGTATT
TTGTGTGATTTTTTCGTTGCAGTTCTCTCTTGGAATGTACAAAGTGTGGC
GTTTGTTGAACCCACTAGATCATGGCCAGCTTCCATACAGCAGTGACGGC
CTTCTGACGAGAAACTTCACTTTAGCGGTAGGTTGAAAGCCTTATCTACG
TTAGCTCAGAATCATGTCTTCCCGAGTTCTTGAAAACATGGCAACATTGA
GAACGTGTTCCCACGCATGCGGTACACTGCGACTGCGGTGTGGAAACATG
CCTGTACTCTGTCCTGTACATGCATCACACGGCCCATACTCGAGCGTTCC
ATATGGTGTCTGCTCTTGTCTCTTTGAGAGGGCTCTCATTGAGTCCTCTT
GATGCCCTCCCGGACCGGCTTGCTCTAGAATCCCCCCACGGTACACCCAA
GTTGGGCTCCGGCAATACCCAGGCCCCGATGTGGGCGGTTCCTTATCGAC
CTGGGGGGGGCGTGAGCTCCCTTCTTTCCGCTCTCTGTTCTTCCACGGCA
GGCCGGTTTTGTCTTGTACATGTAGGTTGTGTTACCGTAGATTCCGCTGA
GCCCAAGTCCTTGGAGCAAGTTCGTTTCAAATATAACTAGACATTAAACG
CATCATGGTCACTACGTGAAGACCGTTCGAAATATGTCTTCTTCTGTTTC
CTGGTGTTCCGATGCGCGGGCCTCTATTGTGTATCGTGCGAGTGTGAAGC
ACGTGACCCGTACAACAATGGCCATCGCGTCACACATTCTCATTTTCGGT
GCCTGGCCAATGCCTCGAAGGGAATCGTACACATGCTCTCGAGGACAATA
TAGTCGCTTGAACGCCGTCTGTTCTTCTCCCGCGTTTGTCGCGGGTCTTG
CCTTGCAGCGGAGGCAGGCCGCGCAGAGGTCCTTGGGGGTGA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig983:20291..21282- >mRNA_E_fasciculatus_S2_contig983.17838.1 ID=mRNA_E_fasciculatus_S2_contig983.17838.1|Name=mRNA_E_fasciculatus_S2_contig983.17838.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=129bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig983:20291..21282- (Ectocarpus fasciculatus EfasUO2)
CTCGTGCTGTACGCCAGGGAGGAACGCTTGGCGGAACAATCTCCATGGCG
TAGCAAACATCGCGGCAAGATGCCACCCCCGCCAGGACCGGGCAGCGGAG
GCAGGCCGCGCAGAGGTCCTTGGGGGTGA back to top
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