mRNA_E_fasciculatus_S2_contig983.17836.1 (mRNA) Ectocarpus fasciculatus EfasUO2
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: Methyltransf_11 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A6_9PHAE) HSP 1 Score: 466 bits (1200), Expect = 3.400e-165 Identity = 228/258 (88.37%), Postives = 235/258 (91.09%), Query Frame = 1 Query: 40 MVPPPPLAAFLAAGHGTFSPKPLLPMVAQGSSRRITRGLSGATCRPLRISMQDFSSTAYWNKVYSSGQDDSGQQAVSEWHVEGDVFVEEVERLLPAGGPSAT---AAGREGVAVLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLTFDDASFDAAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGTWMCVSFTPPEIALPLLEECKEWEVGVEKWRSFWMYVGRKRSI 804 MVPPPPL AFLAAGH TF PK LLP+V QGSSRRI+ G SG T PLR+SMQDFSS+AYWNKVYSSG+DDSGQQAVSEWHVEGD FVEEVERLLPAGGPSAT AAGRE AVLNVGCGTS LWESMYDHGWRNITNIDFSKPCIEQGR S SSASRPGVKWLVMDACSLTFDDASFD AIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGG WMCVSFTPPEIALPLLEECK+WEV VEKWRSFWMYVGRKR + Sbjct: 1 MVPPPPLTAFLAAGHRTFPPKTLLPVVVQGSSRRISSGWSGGTRLPLRVSMQDFSSSAYWNKVYSSGEDDSGQQAVSEWHVEGDAFVEEVERLLPAGGPSATKHTAAGREEAAVLNVGCGTSTLWESMYDHGWRNITNIDFSKPCIEQGRLSPSSASRPGVKWLVMDACSLTFDDASFDTAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGIWMCVSFTPPEIALPLLEECKDWEVEVEKWRSFWMYVGRKRGV 258
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: Methyltransf_11 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ46_ECTSI) HSP 1 Score: 266 bits (679), Expect = 1.360e-87 Identity = 123/132 (93.18%), Postives = 125/132 (94.70%), Query Frame = 1 Query: 409 SMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLTFDDASFDAAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGTWMCVSFTPPEIALPLLEECKEWEVGVEKWRSFWMYVGRKRSI 804 SMYDHGWRNITNIDFSKPCIEQGR S SSASRPGVKWLVMDACSLTF+DASFD AIDKGTLDAIACSEAFDWFL RMARSIVRVLRPGG W+CVSFTPPEIALPLLEECKEWEV VEKWRSFWMYVGRKR I Sbjct: 15 SMYDHGWRNITNIDFSKPCIEQGRLSPSSASRPGVKWLVMDACSLTFEDASFDTAIDKGTLDAIACSEAFDWFLSRMARSIVRVLRPGGIWVCVSFTPPEIALPLLEECKEWEVEVEKWRSFWMYVGRKRGI 146
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P5A5_9EUKA) HSP 1 Score: 127 bits (320), Expect = 5.280e-32 Identity = 78/216 (36.11%), Postives = 111/216 (51.39%), Query Frame = 1 Query: 166 TCRPLRISMQDFSSTAYWNKVYSSGQDDSGQQAVSEWHV--EGDVFVEEVERLLPAGGPSATAAGREGVAVLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLTFD--DASFDAAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGTWMCVSFTPPEIALPLLEECKEWEVGVEKWRSFWMYVGRKRS 801 T R + F+S AYW+ VYSS ++ + +EW + D E + L S VL +GCG+S+L ++ GW IT D S ++ R RPGV ++V DA L+ D SF A +DK TLDAIACSE +D+ + +A +VRVLRPGG W+C+S T P LP+L + E+W ++Y GR R+ Sbjct: 33 TRRCAHVCASAFTSPAYWDDVYSS---EAEMEQSTEWLAGFDDDALTELLHHALEEERAS---------PVLELGCGSSSLSAQLHASGWTKITACDISAIAVQAQRLQ-----RPGVNYVVADARCLSRDVGAGSFSAVVDKATLDAIACSEGWDYEVGLVASEVVRVLRPGGKWLCISMTAPTTLLPILARANWASITCEQWNGLFVYRGRTRA 231
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBJ9_HETAK) HSP 1 Score: 127 bits (318), Expect = 1.960e-31 Identity = 73/208 (35.10%), Postives = 116/208 (55.77%), Query Frame = 1 Query: 193 QDFSSTAYWNKVYSSGQDDSGQQAVSEWHVEGDVFVEEVERLLPAGGPSATAAGREGVAVLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGV---KWLVMDACSLTFDDASFDAAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGTWMCVSFTPPEIALPLLEECKE--WEVGVEKW-RSFWMYVGRKR 798 Q +++ +YW+ Y + D EW +E + + +P + ++ +GCG S L MY++GW++I+N+D+S IEQ +A G+ W MDA L F + S+ A IDKG LDA+ACSEAFD ++P++A+S+ +VL+PGG + C+SF P I PLLEE + W+V VE+ + +Y+ K+ Sbjct: 91 QSYATRSYWDDFYKANSD------TYEWFLEYNDLQSSLNTKVP-----------KEHQIIMLGCGNSNLTIDMYNNGWKSISNVDYSPLVIEQ-----MAAKHKGIGDLSWHQMDARDLRFPENSYGAVIDKGLLDAMACSEAFDLYIPQIAQSVCKVLQPGGKYYCISFCQPSIVKPLLEENMKDHWQVEVERLTEKYLLYLCTKK 276
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q5J1_9DINO) HSP 1 Score: 117 bits (292), Expect = 1.150e-27 Identity = 70/183 (38.25%), Postives = 96/183 (52.46%), Query Frame = 1 Query: 214 YWNKVYSSGQDDSGQQAVSEW---HVEGDVFVEEVERLLPAGGPSATAAGREGVA-VLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLTFDDASFDAAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGTWMCVSFTPPEIALPLLEECKEWEV 750 +WN VY++ Q G+ A EW H + +EEV R+ + +L+VGCG S L E MYD G+ NI NID S IE R + RPG+ WL MDA ++TF D SFD +DK LD + C++ + ++RVLR GG ++CVS PP +A+ L EW V Sbjct: 53 FWNSVYAAAQ--GGKGATYEWIAGHEDLKAILEEV-------------VARDWASRILHVGCGISTLPELMYDDGYSNIVNIDISDEAIELMRLR--NVERPGMTWLEMDATTMTFADGSFDLVLDKSLLDPLLCAKDAQEVVAAYMGEVIRVLRSGGAFVCVSLNPPGVAMKSLRLRPEWSV 218
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LQX6_9DINO) HSP 1 Score: 111 bits (277), Expect = 1.840e-26 Identity = 61/159 (38.36%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 346 AAGREGVA-VLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLT-FDDASFDAAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGTWMCVSFTPPEIALPLL-------EECKEWEVGVEKWRSFWMYVGRK 795 A GRE A +L+ GCG S L E MYD G+ +I N D S I+Q ++ + RP ++WLV+DA + +DASFD IDK LD AC ++ +W + R R ++RVLRPGG ++CVS+ P + L E + ++ + ++Y+GRK Sbjct: 27 ATGREKAASILHAGCGNSLLPEQMYDEGYTDIVNFDNSSVVIDQ-MSARNRDRRPKMRWLVLDALEMRPLEDASFDVVIDKSVLDTFACMDSSNWVVARYMREVMRVLRPGGAFLCVSYGSPSTRMSFLVMPHIGLEGLRHVKMDSPTDNAHYVYIGRK 184
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: S-adenosyl-L-methionine-dependent (methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ55_9STRA) HSP 1 Score: 110 bits (276), Expect = 6.740e-26 Identity = 75/213 (35.21%), Postives = 110/213 (51.64%), Query Frame = 1 Query: 184 ISMQDFSSTAYWNKVYS---SGQDDSGQQAVSEWHVEGDVFVEEVERLLPAGGPSATAAGREGVAVLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLT-FDDASFDAAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGTWMCVSFTPPEIALPLLEECKEWEVGVE----KWRSFWMYVGRKR 798 +S Q +S +W+ Y+ G+ ++G+ +W + + + E LL + AG VL +GCG S L E MYD GW NIDFSKP I+ R+ + +PG++W VMDA ++ D S IDKG +DA+ S+ + + ++ RVLRPGG+++C SF PE LPLL GVE + +YVG KR Sbjct: 22 LSRQQYSLREFWDAFYTPYDEGESEAGE--TYDWFLG---YPKMREALLEHASHARNGAG----TVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTD--KPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYVGYKR 223
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: EEF1AKNMT (protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812T161_9DINO) HSP 1 Score: 112 bits (280), Expect = 7.990e-26 Identity = 66/168 (39.29%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 214 YWNKVYSSGQDDSGQQAVSEWHVEGDVFVEEVERLLPAGGPSATAAGREGVAVLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLTFDDASFDAAIDKGTLDAIACSEAFDWFLPRMARSIVRVLRPGGTWMCVSFTPPEIAL 717 YWNK Y G EW + F E +E L+ +GR AVL+VGCG S L E+MYDHG++++TNID ++ CI+Q + RP +KW MDA + ++SFDA IDK LD AC + + + + RVLRP GT++CVS+ P L Sbjct: 101 YWNKRYR------GDPNPFEWL---ESFAE-LESLIKE-----ATSGRTDAAVLHVGCGNSLLPEAMYDHGYKDVTNIDIAEVCIQQ-MAERNRTLRPELKWFEMDATEMGLIESSFDAVIDKSVLDTFACGDNASTVINKYLLEVQRVLRPRGTFLCVSYGVPNTRL 252
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: Methyltransf_11 (domain-containing protein n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8N9F8_COPC7) HSP 1 Score: 108 bits (270), Expect = 3.550e-25 Identity = 71/213 (33.33%), Postives = 111/213 (52.11%), Query Frame = 1 Query: 193 QDFSSTAYWNKVYSSGQDDSGQQAVSEWHVEGDVFVEEVERLLPAGGPSATAAGREGVAVLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLTFDDASFDAAIDKGTLDAIACSEAFDWFLPRM--------ARSIVRVLRPGGTWMCVSFTPPEIALP-LLEECKEWEV-GVEKWRSFWMYVGRKRS 801 +++SS YWN+ Y+ +++S +W V+ + L+P + +L +GCG S L E MYD G+ NI N D+S IEQ RT S RP ++W MD L F+D SFD AIDKGT+D++ ++ W P+ A+ +RVLR GGT++ ++F P L+ E EV + + +++Y+ RK+S Sbjct: 11 EEYSSKEYWNQRYAQEEEESS----FDWFKTYADIVDIIHELIP----------EKSSRILMLGCGNSKLSEEMYDDGYENIVNTDYSDVLIEQMRTRHSET-RPKMEWHEMDVRDLKFEDGSFDVAIDKGTMDSMMTAKGDVWDPPQKVIDDCTKEAKEALRVLRKGGTFIYLTFGQPHFRQRYLIHENTTLEVRALGEAFHYYLYIVRKQS 208
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Match: Methyltransf_11 (domain-containing protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3S0U6_PHLGI) HSP 1 Score: 106 bits (264), Expect = 2.700e-24 Identity = 61/179 (34.08%), Postives = 95/179 (53.07%), Query Frame = 1 Query: 193 QDFSSTAYWNKVYSSGQDDSGQQAVSEWHVEGDVFVEEVERLLPAGGPSATAAGREGVAVLNVGCGTSALWESMYDHGWRNITNIDFSKPCIEQGRTSTSSASRPGVKWLVMDACSLTFDDASFDAAIDKGTLDAIACSEAFDWFLP--------RMARSIVRVLRPGGTWMCVSFTPP 705 +++ + YW+K Y+ DDS +W + + + + L+P + +L +GCG S L E MYD G++NI N+D+S IE+ R RPG++WL MD L F+ SFD AIDKGT+DA+ ++A W P + ++RVLRP GT++ ++F P Sbjct: 10 EEYGTKQYWDKRYTLESDDS----TFDWFKKYEDIADLIRELIPD----------KSARILMLGCGNSTLSEDMYDDGYKNIVNVDYSGILIEKMRRKHQEV-RPGMEWLEMDVRELKFNSESFDVAIDKGTMDAMMTAKADVWDPPEEVIENCTQEVNEVLRVLRPDGTFLYLTFGQP 173 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig983.17836.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig983.17836.1 >prot_E_fasciculatus_S2_contig983.17836.1 ID=prot_E_fasciculatus_S2_contig983.17836.1|Name=mRNA_E_fasciculatus_S2_contig983.17836.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=269bp MDRGGLPSIAASTMVPPPPLAAFLAAGHGTFSPKPLLPMVAQGSSRRITRback to top mRNA from alignment at E_fasciculatus_S2_contig983:8098..11227- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig983.17836.1 ID=mRNA_E_fasciculatus_S2_contig983.17836.1|Name=mRNA_E_fasciculatus_S2_contig983.17836.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3130bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig983:8098..11227- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig983:8098..11227- >mRNA_E_fasciculatus_S2_contig983.17836.1 ID=mRNA_E_fasciculatus_S2_contig983.17836.1|Name=mRNA_E_fasciculatus_S2_contig983.17836.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=807bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig983:8098..11227- (Ectocarpus fasciculatus EfasUO2)back to top |