mRNA_E_fasciculatus_S2_contig9811.17819.1 (mRNA) Ectocarpus fasciculatus EfasUO2
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: Ubiquitin (family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI) HSP 1 Score: 507 bits (1305), Expect = 4.900e-174 Identity = 343/377 (90.98%), Postives = 344/377 (91.25%), Query Frame = 1 Query: 112 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANNNAXXXXXXXXXXGPNTSALPNPWAAAGTPXXXXPGGANAPAPAPGANPWAALRPGMGAAGGGMPGMPGGGQMDPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSNFGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 1242 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGAN XXXXXXX GPNTSALPNPWAAAG XXXX NAPA PGANPWAALR GMGAAGGGMPGMPGGGQMDPAMMQQMMNNPMVQQMVSQMA+DPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQ MEQLQRAGV PPGMMPG PGA GGGA DFGPGLAGLSNFG NLGGG PPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX ANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV Sbjct: 193 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANXXXXXXXXXXPSAGPNTSALPNPWAAAGXXXXXXXXXTNAPAQTPGANPWAALRQGMGAAGGGMPGMPGGGQMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQWMEQLQRAGVLPPGMMPGPPGAGGGGA-DFGPGLAGLSNFGTFNLGGGTPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXPPVANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 564
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M7_9STRA) HSP 1 Score: 201 bits (512), Expect = 7.260e-56 Identity = 188/420 (44.76%), Postives = 227/420 (54.05%), Query Frame = 1 Query: 1 MKSLLNNPDMLRNIMFSNPQMQXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANNNAXXXXXXXXXXGPNTSALPNPWAAAGTPXXXXPGGANAPAPAPGANPWAALRPGMGAAGGGMP-GM-PGGGQMDPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPG------APGAAGGGAPDFGPGLAGLSNFGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGG 1236 M+ LLN+P+ LR+++ XXXXXXXXXXX PA +RQ L+M RNP AM +A RSQD MS +E P GFNALRR+YTE+QEPMM+A XXXXXXXXXX +A+PNPWAA G GA A GANPW++L MG AGG P GM P G DPA + MM NPM Q M+ QM +PA++E M+ NPQL+ + A P +R QLPQ + M+DP N+QA+ QMQQSM QLQRAG+ PP +PG AP AA P AAGGLDFS LL P S A ANP E YAAQL Q+ MGF+D AA +RALV ++GNVN AVER++GG Sbjct: 158 MQGLLNDPETLRSMVTGXXXXXXXXXXXXXXXXVFNDPAVIRQSLEMMRNPAAMREAMRSQDRAMSNLETHPEGFNALRRMYTEMQEPMMEAMSNP----------EQQXXXXXXXXXXXXXXXGTAMPNPWAAPGAAPQAA--GAAGXXXA-GANPWSSL---MGGAGGPPPAGMAPPGMAQDPAAVLNMMQNPMAQDMIRQMTSNPAVVEQMLNMNPQLRAMVDAQPGMRQQLPQLLSGMSDPANLQAMIQMQQSMAQLQRAGIMPP--IPGMXXXXXAPAAA---TPXX------------------XXXAAGGLDFSALLAGHGVGMP---------------PGSGAAVPPAWLAAAQPPPPP------ANPAEAYAAQLAQLRAMGFSDDAASLRALVDARGNVNAAVERLIGG 517
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: Ubiquilin (n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX3_NANGC) HSP 1 Score: 136 bits (342), Expect = 3.830e-32 Identity = 147/412 (35.68%), Postives = 186/412 (45.15%), Query Frame = 1 Query: 112 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGND-NAGTAGANNNAXXXXXXXXXXGPNTSALPNPWAAAGTPXXXX------------------------PGGANAPAPAPGANPWAALRPGMGAAGGGMPGMPGGG-------------QMDPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRR--MADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSNFGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERM 1227 PA +RQ ++ ARNP A Q RS DL MSQIEN P GFNALRR+Y ++QEPMM+A G +D NAGT ++A PNT+ALPNPWA++ TP XXX P AP PGA P + G G A P M G +M+ + Q MNNPM++QM+ M +PA +E M+ NPQL+Q L +NP R + M DP V+A M QLQRAG+ P G P P GP + ++ G G APP LDFS LL P S A+P +A QL Q+ DMGFTD A ++AL A+ GNVN A+ER+ Sbjct: 78 PAMLRQAMETARNPAAREQMMRSNDLAMSQIENHPEGFNALRRMYHDIQEPMMEAMTGSNSSDPNAGTTANASHASNNATPAPTSRPNTAALPNPWASS-TPSXXXXXXXXXXXXXXXXXXXXXXXXXAMPPMGFAPMMPPGAGPQQPQQGGGGQAPMANPFMGMGXXXXXXXXXXXXXXEMEQVL--QSMNNPMMRQMMQSMMGNPAFLEQMMVANPQLRQVLDSNPHARAMMXXXXXXXXMTDPNTVRA-------MLQLQRAGIIPNMGPSGVPSPF----PPNGPPPSQIAGQGGA---GQAPP----LDFSALLNQMGPMGLGSAPPT--------GPPSMPV---------------------ADPATRFAPQLQQLRDMGFTDEARNLQALQATNGNVNAAIERL 439
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: Uncharacterized (protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KMH3_PHYPA) HSP 1 Score: 135 bits (340), Expect = 2.870e-31 Identity = 155/458 (33.84%), Postives = 202/458 (44.10%), Query Frame = 1 Query: 4 KSLLNNPDMLRNIM-------------------FSNPQMQXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQAS----EG---MVGNDNAGTAGANNNAXXXXXXXXXXG--------PNTSALPNPW--------AAAGTPXXXXPGGANAPAPAPGANPWAALRPGMGAAGGGMP--GMPGG--GQMDPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSNFGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1233 + L+ NP+++R +M SNPQM XXXXXXXX P T+RQ LD ARNPE M + R+ D MS IE P GFN LRR+Y VQEP++ A+ EG M N A G N N PNT+ LPNPW AAGT G P+ PGA+ L P + AG G+P GM GG G +DPAMMQQM+ NP +QQM+ + + M M+ PQL+ L NP R + P F+R+ + P+++Q + Q+QQ+M L+ PG G P AGL G GG++ LL NT PE+ YA+QL+Q+ +MGF D +RAL A GNV+ AVER+LG Sbjct: 163 QQLMQNPNLMREMMNMPAVXXXXXXXXXXXTLIMSNPQMXXXXXXXXXLAHILNDPGTLRQTLDAARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLLNAATMGGEGANDMASNPFAAMMGVNGNPPRPAQAQGGANTNAAGTTLPNTAPLPNPWNPTHSAVLPAAGT------GAGQTPSAVPGADAGGVL-PDL--AGLGLPDLGMMGGAGGLLDPAMMQQMLQNPQIQQMMQGLLSNXXYMNQMLNLQPQLRNMLNQNPQFRDMMQNPDFIRQXSSPESLQQMMQLQQAMMGLRGRQT---------PGQNAGQTP------AGLGELGXXXX------XXGGMNMDVLLNMFGGL-------------------GNTVPSNPDVP----------------PEQLYASQLSQLQEMGFYDTQENIRALSAVGGNVHAAVERLLG 555
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UN62_9STRA) HSP 1 Score: 133 bits (335), Expect = 5.580e-31 Identity = 139/458 (30.35%), Postives = 190/458 (41.48%), Query Frame = 1 Query: 4 KSLLNNPDMLRNIMFS-------------------NPQMQXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANNNAXXXXXXXXXXGPNTSALP----------------------NPWA----AAGTPXXXXPGGANAPAPAPGANPWAALRPGMGAAGGGMPGMPGGGQMDPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSNFGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGG 1236 +S++ NP+M++ +M S NP M+ P +R+ ++ RNP AM + R+QD + IE+ P GFNALRR+YTEVQEP++ A+ NAG GA+N A G +T+ P NPWA AAGTP NP+ + P G DP M+NNPMVQ M+ QM+++PA++ +M+ NPQ QQ +PA R + P +R M +P N+QA+ QMQQ+M QLQ AGV P G + PG G F PPAA ANPEE YA+QL+Q+ DMGF++R +RAL A+ GNVN AV+R+L G Sbjct: 137 QSMMQNPEMMQQMMESXXXXXXXXXXXXXXGMMQANPAMRTLLEQHPELNHVMNDPELLRRSMEAMRNPAAMREMMRNQDTALRNIESHPEGFNALRRMYTEVQEPLLNATS-----SNAGI-GASNPAFVMPGAVG--GTSTTTPPTXXXXXXXXXXXXXXXXXXXXXNPWAQPTPAAGTP-----------------NPFGSATP--------------FGAFDP----NMLNNPMVQTMMQQMSQNPALLRSMMEMNPQFQQL---DPATREMMLNPDVLRTMXNPANLQAMMQMQQAMGQLQSAGVLPSGAV--------------NPGFGGFGAF---------PPAAA-------------------------------------------------------MPVANPEELYASQLSQLVDMGFSNREQNLRALQATFGNVNAAVDRILSG 470
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: Ubiquitin (family protein putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV74_PYTIN) HSP 1 Score: 132 bits (332), Expect = 1.620e-30 Identity = 142/402 (35.32%), Postives = 195/402 (48.51%), Query Frame = 1 Query: 112 PATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEG----------MVGNDNAGTAGANNNAXXXXXXXXXXGPNTSALPNPWAAAGTPXXXXPG-GANAPAPAPGANPWAALRPGMGAAGG-GMPGMPGGGQMDPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQ-NPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSNFGNLNLGG----GAP---PAAGG---LDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 1242 P +RQ ++ RNP A IE+ P GFNALRR+Y +VQEP++ A+ M G A TA + + TS+ NPWA A PG G+ +P P A+ GMGA GG G G G +P ++ Q++ +P++Q M+ +MA +P + + + Q NPQ+ L ANP +R + P F+R + +PQN+QA+ QMQ +M QL+ +G+ P F +NLGG GAP PAAG LDFSTLLG XXXXXXXX +P+ ANPEE YA+QLTQ+NDMGF++R +RAL A+ GNV+ AVER+L G + Sbjct: 154 PELLRQSMEAMRNPAAXXXXXXXXXXXXXNIESHPEGFNALRRMYQDVQEPLLDATSAGSRTGGGTFAMPGVPGASTASGSGQSAASGSTPPASA--TSSQANPWATA-------PGAGSQSPFAXXXXTPSASAGAGMGAFGGLGS----GAGAPNPELLSQLLQSPLMQPMLDEMANNPQMFVSQMEQMNPQVAAMLNANPQMRQMMMNPDFIRGIMNPQNLQAMLQMQSAMNQLRSSGLIP--------------------------GFXAMNLGGAGMPGAPGTTPAAGSGPPLDFSTLLGGXXXXXXXXAA----------APA-------------------------ANPEEQYASQLTQLNDMGFSNRDQNIRALQATFGNVHAAVERILNGSI 481
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: Uncharacterized (protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2I4V8_9BRAS) HSP 1 Score: 133 bits (334), Expect = 2.010e-30 Identity = 138/444 (31.08%), Postives = 199/444 (44.82%), Query Frame = 1 Query: 4 KSLLNNPDMLRNIMFSNPQMQXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASE---------------GMVGNDNAGTAGA----NNNAXXXXXXXXXXGPNTSALPNPWAAAGTPXXXXPGGANAPAPAPGANPWAALRPGMGAAG------------GGMPGMPGGGQMDPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSN-FGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1233 ++++NNP+ +R+++ SNPQM+ XXXX P+ +RQ L+ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP + A+ ++GN T G+ N++ PN++ LPNPW A G PG N+ A G P +G G G P + GG D + + Q++ NP + QM+ + +P M +++ NPQ+Q L +NP LR + P F+R+ + P+ +Q + +QQS+ R PG GAA G + GL L N FG+L AGGL + PEE +A QL Q+ +MGF DRA +RAL+A+ GNVN AVER+LG Sbjct: 189 QNIMNNPEFMRSMIMSNPQMRELVDRXXXXGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNHLRRMYENVQEPFLNATTMSGNAGSNAASNPFAALLGNQGVTTQGSDVSNNSSTPNADTGTGNSIPNSNPLPNPWGATGG-QTTAPGRTNSGGDARG--------PALGGLGXXXXXXXXXXXLGADPTL--GGTPDASQLNQLLQNPAMSQMMQSVLSNPQYMNQLMSLNPQVQGMLDSNPQLREMMQNPDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTT---QDPGQTGAAAAGTGNNA-GLDLLMNMFGSLG--------AGGLSGAN-------------------------------------------------QPNVPPEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLG 560
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: BnaC03g47520D (protein n=14 Tax=Brassiceae TaxID=981071 RepID=A0A078F0B9_BRANA) HSP 1 Score: 130 bits (326), Expect = 1.950e-29 Identity = 136/432 (31.48%), Postives = 189/432 (43.75%), Query Frame = 1 Query: 4 KSLLNNPDMLRNIMFSNPQMQXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASE---------------GMVGNDNAGTAGANNNAXXXXXXXXXXG--PNTSALPNPWAAAGTPXXXXPGGANAPAPAPGANPWAALRPGMGAAGGGMPGM--PGGGQMDPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRG--QLPQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSN-FGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1233 +SL+NNP+ +R+++ SNPQM+ P+ +RQ L+ ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP+M A+ ++GN T A+NN+ PN + LPNPW A G NAP + G+G G GM G P G D + + Q++ NP + QM+ + +P M ++ NPQL+ Q P F+R+ + P+ +Q + +QQS+ R PG GAA GA + GL L N FG+L GG LG S+N PEE +A QL Q+ +MGF DRA +RAL+A+ GNVN AVER+LG Sbjct: 173 QSLMNNPEFMRSMIMSNPQMRDLVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNHLRRMYENVQEPLMNATTMPGNGGSNAASNPFAALLGNQGVTTDAASNNSTTQNAETGTGNGIPNANPLPNPWGATA-------GQTNAPGTTNSGGDTRST--GLGLGGLGMLGADSPLGATPDASQLNQILQNPAMSQMMQSVLSNPQYMNQLMNLNPQLRTXXXXXXXXXXXXQNPDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTT---QDPGQTGAAAAGAGNNA-GLDLLMNMFGSLGAGG--------------LG-----------------------STNQPNVP--------------------PEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLG 534
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: Hypothetical (protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NGN1_MICPS) HSP 1 Score: 129 bits (324), Expect = 4.090e-29 Identity = 169/436 (38.76%), Postives = 211/436 (48.39%), Query Frame = 1 Query: 7 SLLNNPDMLRNIMFSNPQMQXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQAS----EGMVGN-------DN--AGTAGANNN--------AXXXXXXXXXXGPNTSALPNPWAA-AGTPXXXXPGGANAPAPAPGANPWAALRPGMGAAGGGMPGMPGGGQMDP-AMMQQM---MNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRGQL--PQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSNFGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERML 1230 S++ NP+ +R +M SNPQM+XXXXXXXXXXX P T+R+ ++ARNP M + R D M + +E P GFNAL R YT+VQ PMM A + VGN DN A GAN+ AXXXXXXXXXX PNTS LPNPWA AG+ XXXX PAPA PG+G A GM GM G + P MM QM ++NP + M+ M +PA+M+ MI +P++ R QL P+F+R A+ QMQ++M QLQ GV PPGM G PGA + F L GGAPP A PEE YA+QL Q+ DMGF D A +RAL A+ GNV+ A+ER+L Sbjct: 192 SIVANPESVRAMMESNPQMRXXXXXXXXXXXALNDPETLRRTFEVARNPSLMREQMRQHDRMFANVEAHPEGFNALARAYTDVQAPMMNAMASGRDDGVGNTVGGAQADNPFAALFGANDGNAAPGATAAXXXXXXXXXXSPNTSPLPNPWAPNAGSXXXXX----XXPAPA--------GLPGLGGAPMGMGGM---GNVTPDQMMSQMEAILSNPAMANMMQSMMSNPAVMQQMIDSDPRMXXXXXXXXXXREQLTNPEFLRXXXXXXXXXAMMQMQRAMTQLQGNGVMPPGM--GMPGAXXXXXXXXXXXXGAANPFAALM--GGAPPVA---------------------------------------------------------DATPPEEAYASQLQQLKDMGFFDEAQNIRALQATFGNVSAAIERLL 551
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Match: DSK2a (n=25 Tax=Pooideae TaxID=147368 RepID=A0A3B5XZQ6_WHEAT) HSP 1 Score: 127 bits (320), Expect = 1.590e-28 Identity = 140/452 (30.97%), Postives = 193/452 (42.70%), Query Frame = 1 Query: 1 MKSLLNNPDMLRNIMFSNPQMQXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQAS------EG---------MVGNDNAGTAGANNNAXXXXXXXXXXG---PNTSALPNPWA-----AAGTPXXXXPGGANAPAPA-PGANPWAALRPGMGAAGGGMPGMPGGGQM---------------DPAMMQQMMNNPMVQQMVSQMAEDPAIMETMIAQNPQLQQALQANPALRG--QLPQFMRRMADPQNVQALAQMQQSMEQLQRAGVFPPGMMPGAPGAAGGGAPDFGPGLAGLSNFGNLNLGGGAPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXSPSSNTAXXXXXXXXXXXXXXXXXXXXXANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLG 1233 M+SL+NNPD++ N++ +NPQ XXX P+ +RQ L+ ARNPE M + R+ D MS IE P GFN LRR+Y VQEP + A+ EG ++GN AG XXX G PNT+ LPNPW+ A GTP A A PG A L +G GG D A++ QM+ NP + QM+ + DP M +++ NP + +++N LR Q P+F+R+MA P+ +Q L +QQ+M + P AG NLGG G + TL+G P+++ PEE YA QL Q+ +MGF D A +RAL+A+ GNV+ AVER+LG Sbjct: 172 MQSLMNNPDLIXNMIMNNPQXXXXXDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPFLNATTMGGGGEGTPASNPFAALLGNQGPNQAGXXXXXXXXTGPESTTGTPVPNTNPLPNPWSNNAGGAQGTPRSGPAASTRAGATGGPGGLGSADLSSLLGGLGGNAXXXXXXXXXXXXXXXXXXXXXXPPDAALLSQMLQNPAMMQMMQNIMSDPQSMNQLLSMNPNARSLMESNTQLRDMFQNPEFLRQMASPEALQQLLSLQQTMSSQ---------LGQNQPSQAG-------------------NLGGNGTGTRGNVGLDTLMGMLSGLGAGGGLGV---------PNASNVP----------------------PEELYATQLGQLQEMGFFDTAENIRALMATSGNVHAAVERLLG 564 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9811.17819.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9811.17819.1 >prot_E_fasciculatus_S2_contig9811.17819.1 ID=prot_E_fasciculatus_S2_contig9811.17819.1|Name=mRNA_E_fasciculatus_S2_contig9811.17819.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=415bp MKSLLNNPDMLRNIMFSNPQMQQVMQNNPQLAQVLNDPATMRQYLDMARNback to top mRNA from alignment at E_fasciculatus_S2_contig9811:454..5245+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9811.17819.1 ID=mRNA_E_fasciculatus_S2_contig9811.17819.1|Name=mRNA_E_fasciculatus_S2_contig9811.17819.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4792bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9811:454..5245+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9811:454..5245+ >mRNA_E_fasciculatus_S2_contig9811.17819.1 ID=mRNA_E_fasciculatus_S2_contig9811.17819.1|Name=mRNA_E_fasciculatus_S2_contig9811.17819.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1245bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9811:454..5245+ (Ectocarpus fasciculatus EfasUO2)back to top |