mRNA_E_fasciculatus_S2_contig9810.17818.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9810.17818.1
Unique NamemRNA_E_fasciculatus_S2_contig9810.17818.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN4_ECTSI)

HSP 1 Score: 591 bits (1523), Expect = 9.320e-207
Identity = 295/311 (94.86%), Postives = 297/311 (95.50%), Query Frame = 1
Query:    1 MINYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            MINYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQ KIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFL LADNDTTYMILVTNAIGLAIE       VWKVGRFMVGRLDWGGEDGQPRRW+PRM  QAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYK+   
Sbjct:  296 MINYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQAKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLSLADNDTTYMILVTNAIGLAIE-------VWKVGRFMVGRLDWGGEDGQPRRWVPRMMFQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKLKSV 599          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: Cleft (lip and palate transmembrane protein 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN46_9STRA)

HSP 1 Score: 342 bits (878), Expect = 1.030e-109
Identity = 164/309 (53.07%), Postives = 226/309 (73.14%), Query Frame = 1
Query:    7 NYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            N+WKPTL +  +D TA FQRNHIP+ FA  I F ++TGNY+P++ VNEFWLQ KH  ALN+T  +  L +S  P+ L K+Q MSQL  QW  + ++G+  + E D+  ++L +T+P +LV+T ++S LHS+F+FLAFK+D+SFW+ K+RSLEG+SVR M+VN FFQ VI LYL DN+T+Y+ILV++A+GLAIE       +WK+G+    + +W      P R +P +T+ A  SY KS+T+  D+ AT+HLL++V PL+VGY AYSL+ ++HRGWYSWVLNSL GFV  FGF+ MTPQLFINYK+   
Sbjct:  278 NFWKPTLAIQLVDMTADFQRNHIPAVFAEDIKFHAATGNYYPIVVVNEFWLQTKHYTALNATAPAAALAMSYRPVGLGKWQIMSQLARQWRTRARMGLQSESETDSIVDMLGDTSPWLLVLTFLISALHSIFDFLAFKSDVSFWR-KRRSLEGLSVRSMVVNCFFQIVITLYLFDNETSYLILVSSAVGLAIE-------LWKLGKAFSAKCEWA-----PGRLLPSITMTASASYAKSETRRHDETATSHLLFVVVPLVVGYTAYSLVQREHRGWYSWVLNSLTGFVCEFGFIAMTPQLFINYKLKSV 573          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W867_9STRA)

HSP 1 Score: 298 bits (762), Expect = 3.510e-93
Identity = 156/318 (49.06%), Postives = 220/318 (69.18%), Query Frame = 1
Query:    1 MINYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITF------QSSTGNYH-PVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            ++NYWKPTL L  +     F+RN IP   A ++ F      Q+   + H P LY NEFW+ QKHL+ +N T++ V L L  S +SL ++Q   QLE QW  Q  +G++ +G  DT R++L +T+P +LV+T I+SLLH+VF FLAFKND++F++ K++   G+SVR + +N FF AVI LYL D+DT++M+L+T++IGL IE        WKV + +  RL    E G   RW     L+  +SY+ S+TKE+D++AT+HLL+LV PLMVGY+AYSL++ +H+GWYSW+L+SLVGF+Y FGFVMMTPQLFINYK+   
Sbjct:  229 VVNYWKPTLRLHLVHDVPAFRRNAIPPLVAENLKFVDTDISQARGRDLHFPPLYRNEFWIMQKHLIPMNETIQKVPLTLQYSSMSLLQWQLQIQLEEQWRQQRAMGLSNEGNNDTLRQVLMDTDPKLLVLTAIISLLHTVFEFLAFKNDVAFYR-KRKDFRGLSVRTIALNCFFHAVILLYLFDSDTSWMVLMTSSIGLVIE-------FWKVSKAI--RLQVDPETG---RW----GLRESDSYQSSRTKEYDEIATSHLLFLVLPLMVGYSAYSLVHFKHKGWYSWILSSLVGFIYAFGFVMMTPQLFINYKLKSV 529          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: Hypothetical (protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNP8_9STRA)

HSP 1 Score: 293 bits (749), Expect = 1.780e-90
Identity = 149/317 (47.00%), Postives = 210/317 (66.25%), Query Frame = 1
Query:    1 MINYWKPTLTLGQLDFTAIF-QRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGR-----FMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            ++ Y KP+LTL  +     F QR  IP  F+ H+ + S    Y+P+LY +EFW+   HL+ +N T++    E+ I  + +WK+Q MSQ+E  WA Q K+    D   D FR +L ETNP +L +T IVS+LH+VF+ LAFKNDISF++ KK S+EG+S+R M+VN FFQ VI LYLADN+T +M+L++N +GL IE       +WK+ +     F  G++ W                +   SY+ SKTKE+D++AT+HLL++  PL+ GY  YSL++Q+H+GWYSW+LN+LVGF+YMFGFVMMTPQLFINYK+   
Sbjct:  291 LLLYAKPSLTLQIVPVELQFPQRQSIPPQFSMHMDWYSDY-EYYPILYNSEFWIMTDHLVEVNGTIDESVTEMRIEHVPMWKWQLMSQMEQTWANQEKMTGEEDSSNDMFRTMLMETNPYLLAVTAIVSVLHTVFDILAFKNDISFFRGKK-SMEGLSLRSMVVNTFFQVVILLYLADNETNFMVLMSNGVGLLIE-------IWKISKAVKISFEGGKIHW----------------EEASSYKMSKTKEYDEIATSHLLFITMPLVAGYGLYSLVHQKHKGWYSWILNTLVGFIYMFGFVMMTPQLFINYKLQSV 582          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: Uncharacterized (protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068V1R3_COFCA)

HSP 1 Score: 281 bits (718), Expect = 5.420e-89
Identity = 137/310 (44.19%), Postives = 204/310 (65.81%), Query Frame = 1
Query:    4 INYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            I+YWKP +T+  +D    +Q+N +P + A ++  + +TGNY+P ++ NEFWL +  L+A+N TV  + L L + PIS+ K+Q   Q++  +      G   +GE D  + +  E NP +LV+TMIVSLLHSVF+FLAFKNDI FW +K +S+EG+S + ++V+   Q ++FLYL DNDT++MIL ++ IG  IE        WK+G+ M   +D  G+       IP +  + +ESY K+KTKE+DD+A  +L Y++  L+  +A YSL+ ++H+ WYSW+L+SL   VYMFGFVMM PQLFINYK+   
Sbjct:   36 ISYWKPNITINLVDDFTRYQQNAVPPNIAPYLNIEPTTGNYYPTVFFNEFWLLRDKLIAINETVTELPLHLEVGPISMTKWQLFLQIDQSFQIHRNYGSMLEGEADELKRVFLEGNPYLLVVTMIVSLLHSVFDFLAFKNDIQFW-NKNKSMEGLSAKSVVVSFVCQLIVFLYLLDNDTSWMILASSGIGCCIE-------FWKIGKAMHIEIDRSGK-------IPMLRFRDRESYAKNKTKEYDDLAMKYLSYVLFFLVACFAVYSLMYERHKSWYSWILSSLTSCVYMFGFVMMCPQLFINYKLKSV 330          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: Cleft (lip and palate transmembrane protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1C5J2_SOLTU)

HSP 1 Score: 278 bits (712), Expect = 4.460e-88
Identity = 138/310 (44.52%), Postives = 200/310 (64.52%), Query Frame = 1
Query:    4 INYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            I+YWKP +T+  +D    +  N IP   A +I  +S+TGNY+P ++ NEFWL +  L+A+N TV  V L L +SPIS+ K+Q   Q++  +      G   DGE D  + +  E NP +L +TMIVS++HS+F+FLAFKNDI FW +K +S+EG+S + ++VN F Q ++FLYL DNDT++MIL ++ +G  IE        WK+G+ M   +D  G        IP +  + +ESY  +KTKE+DD+A  +L Y++  L V +A YSL+  +H+ WYSW+L+SL   VYMFGF+MM PQLFINYK+   
Sbjct:   36 ISYWKPNVTINLVDDFTRYTANAIPPIVAPYINIESTTGNYYPTVFFNEFWLLRDKLIAINDTVTEVPLHLEVSPISMTKWQLFLQMDQSFQVHRSYGSMLDGESDELKRVFLEGNPYLLGVTMIVSVMHSLFDFLAFKNDIQFW-NKNKSMEGLSAKSVIVNFFCQFIVFLYLLDNDTSWMILASSGVGCCIE-------FWKIGKAMHIEIDRSGR-------IPMLRFRDRESYAGNKTKEYDDLAMKYLSYVLFFLAVCFAIYSLMYDRHKSWYSWILSSLTSCVYMFGFIMMCPQLFINYKLKSV 330          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: Uncharacterized (protein n=4 Tax=Brassica TaxID=3705 RepID=M4CZP9_BRARP)

HSP 1 Score: 281 bits (719), Expect = 4.940e-87
Identity = 139/310 (44.84%), Postives = 200/310 (64.52%), Query Frame = 1
Query:    4 INYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            ++ WKP +T+  +D    + ++ +P + A H+  + STGNY+P +Y NEFWL +  ++ +N TV  V LEL ISPIS+ K+Q   Q++  +  Q   G   DGE D  + +  E NP +L ITM VS+LHSVF+FLAFKNDI FW +K +S+EG+S + +++N   Q VIFLYL DNDT++MIL ++ +G+ IE        WK+G+ M   +D  G        IPR+    +ESY  +KTKE+DD+A   L Y++  L+VG + YSL  ++H+ WYSW+L+SL   VYMFGF+MM PQLFINYK+   
Sbjct:  215 VSLWKPNVTINLVDDFTHYSQSGVPPNIAPHLLVEPSTGNYYPTIYFNEFWLLRDKMIPMNETVSEVPLELEISPISMMKWQLFQQVDQSFQMQRSYGSMLDGESDELKRVFLEGNPYLLGITMFVSMLHSVFDFLAFKNDIQFW-NKNKSMEGLSAKSVVLNFICQFVIFLYLLDNDTSWMILASSGVGVCIE-------FWKIGKAMRIEVDRSG-------MIPRLRFHDRESYASNKTKEYDDIAIKFLSYVLLLLVVGLSIYSLAYERHKSWYSWILSSLTSCVYMFGFIMMCPQLFINYKLKSV 509          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDR7_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.440e-86
Identity = 145/317 (45.74%), Postives = 210/317 (66.25%), Query Frame = 1
Query:    1 MINYWKPTLTLGQLDFTAIF-QRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGR-----FMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            M+ Y KP+LTL  ++ T  F  R  IP  F+ ++ + + + +++P+LY +EFW+ +  L  +N T+    +++      +WK+Q MSQ+E  W  Q K+    D   D  R +L ETNP +L IT IVS+LH++ + LAFKNDISF+K KK S+EG+S+R M++N+FFQ VI LYLADN+T+YM+L++N +GL IE       +WK+       F  GR+ W               ++A  SY KSKTK++D++AT+HLL++  PL+ GY  YSLL+Q+H+GW+SWVLN+LVGF+YMFGFVMMTPQLFINYK+   
Sbjct:  208 MLLYLKPSLTLEVVEVTMNFPSRERIPPQFSKYMDWYNES-HFYPILYSSEFWITKDQLQEVNGTLHESTIDIQFEKAKMWKWQLMSQMEESWTQQEKMTGEEDATSDMLRTMLLETNPYLLGITAIVSVLHTLLDILAFKNDISFFKGKK-SMEGLSLRSMVINVFFQIVILLYLADNETSYMVLMSNGVGLLIE-------IWKITTAVKISFKGGRIQW---------------VEAT-SYSKSKTKKYDEIATSHLLFITMPLVAGYGMYSLLHQRHKGWHSWVLNTLVGFIYMFGFVMMTPQLFINYKLQSV 499          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: cleft (lip and palate transmembrane protein 1 homolog n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GSI8_ANACO)

HSP 1 Score: 280 bits (715), Expect = 2.360e-86
Identity = 136/310 (43.87%), Postives = 201/310 (64.84%), Query Frame = 1
Query:    4 INYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            ++YWKP +T+  +D    +  N+IP + AGH+     TGNY+P +Y NEFWL +  L+ LN TV+ + L L +SPIS+ K+Q   Q+E  +      G   +GE D  + +  E NP +LV+TM+VSLLHSVF+FLAFKNDI FW +K +S+EG+S + ++V+   Q V+FLYL DN+T++MIL ++ +G  IE        WK+G+ M   +D  G+       IP +  +  +SY K+KTKE+DD+A  +L Y++  L+   + YSL+ ++H+ WYSW+L+SL   VYMFGF+MM PQLFINYK+   
Sbjct:  208 VSYWKPNITINLVDDFTRYPHNNIPQTVAGHLNVDPITGNYYPTVYFNEFWLLRDKLIPLNETVKELPLNLELSPISMTKWQLFLQIEQSFQVHRSYGSMLEGETDELKRVFLEGNPYLLVVTMVVSLLHSVFDFLAFKNDIQFW-NKNKSMEGLSAKSVVVSFICQLVVFLYLLDNETSWMILASSGVGCCIE-------FWKIGKAMHIEIDRSGK-------IPMLRFRDHDSYAKNKTKEYDDIAMKYLSYVLFFLVACSSVYSLMYEKHKSWYSWILSSLTSCVYMFGFIMMCPQLFINYKLQSV 502          
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Match: (wild (Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804JHT7_MUSAM)

HSP 1 Score: 279 bits (714), Expect = 3.020e-86
Identity = 137/310 (44.19%), Postives = 201/310 (64.84%), Query Frame = 1
Query:    4 INYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNEFWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGMAGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKKRSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLLLFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKVSGA 933
            I+YWKP +T+  +D    +  N++P + AG++  + +T NY P ++ NEFWL +  L++LN TV  + L L + PISL K+Q   Q+E  +      G   +GE D  + +  E NP +L +TM+VSLLHSVF+FLAFKNDI FW +K +S+EG+S + ++VN   Q ++FLYL DN+T++MIL ++ IG  IE        WK+G+ M   +D  G        IP + LQ +ESY K+KTKE+DD+A  +L Y++  L+  ++ YSL+ +QH+ WYSW+L+SL   VYMFGF+MM PQLFINYK+   
Sbjct:  209 ISYWKPNITINLVDDFTRYPHNNVPPNIAGYLNIEPTTANYFPTIFFNEFWLLRDKLISLNETVAELPLNLELGPISLTKWQLFLQIEQSFQIHRSYGSMLEGEADELKRVFLEGNPYLLGVTMVVSLLHSVFDFLAFKNDIQFW-NKNKSMEGLSAKSVVVNFICQLIVFLYLLDNETSWMILASSGIGCCIE-------FWKIGKAMHIVIDRSGR-------IPMLKLQDRESYAKNKTKEYDDLAMKYLSYVLFFLVACFSIYSLMYEQHKSWYSWILSSLTSCVYMFGFIMMCPQLFINYKLQSV 503          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9810.17818.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized9.320e-20794.86protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Cleft1.030e-10953.07lip and palate transmembrane protein 1-domain-cont... [more]
Hypothetical3.510e-9349.06protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical1.780e-9047.00protein n=5 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Uncharacterized5.420e-8944.19protein n=1 Tax=Coffea canephora TaxID=49390 RepID... [more]
Cleft4.460e-8844.52lip and palate transmembrane protein n=1 Tax=Solan... [more]
Uncharacterized4.940e-8744.84protein n=4 Tax=Brassica TaxID=3705 RepID=M4CZP9_B... [more]
Hypothetical1.440e-8645.74protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
cleft2.360e-8643.87lip and palate transmembrane protein 1 homolog n=3... [more]
(wild3.020e-8644.19Malaysian banana) hypothetical protein n=2 Tax=Mus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9810contigE_fasciculatus_S2_contig9810:1370..5686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score589.7
Seed ortholog evalue7.8e-166
Seed eggNOG ortholog2880.D8LIN4
Model size936
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.apoptotic process
EggNOG OGsKOG2489@1,KOG2489@2759
Cds size936
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9810.17818.1prot_E_fasciculatus_S2_contig9810.17818.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9810 1370..5686 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842625.0039513-CDS-E_fasciculatus_S2_contig9810:1369..14791696842625.0039513-CDS-E_fasciculatus_S2_contig9810:1369..1479Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9810 1370..1479 +
1696842625.0230615-CDS-E_fasciculatus_S2_contig9810:1849..19881696842625.0230615-CDS-E_fasciculatus_S2_contig9810:1849..1988Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9810 1850..1988 +
1696842625.0451007-CDS-E_fasciculatus_S2_contig9810:2588..26721696842625.0451007-CDS-E_fasciculatus_S2_contig9810:2588..2672Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9810 2589..2672 +
1696842625.0551796-CDS-E_fasciculatus_S2_contig9810:3452..35711696842625.0551796-CDS-E_fasciculatus_S2_contig9810:3452..3571Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9810 3453..3571 +
1696842625.066132-CDS-E_fasciculatus_S2_contig9810:4422..45761696842625.066132-CDS-E_fasciculatus_S2_contig9810:4422..4576Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9810 4423..4576 +
1696842625.0763934-CDS-E_fasciculatus_S2_contig9810:4964..50781696842625.0763934-CDS-E_fasciculatus_S2_contig9810:4964..5078Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9810 4965..5078 +
1696842625.0869374-CDS-E_fasciculatus_S2_contig9810:5470..56861696842625.0869374-CDS-E_fasciculatus_S2_contig9810:5470..5686Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9810 5471..5686 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9810.17818.1

>prot_E_fasciculatus_S2_contig9810.17818.1 ID=prot_E_fasciculatus_S2_contig9810.17818.1|Name=mRNA_E_fasciculatus_S2_contig9810.17818.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=312bp
MINYWKPTLTLGQLDFTAIFQRNHIPSSFAGHITFQSSTGNYHPVLYVNE
FWLQQKHLLALNSTVESVDLELSISPISLWKFQTMSQLESQWAAQTKIGM
AGDGEQDTFRELLAETNPIVLVITMIVSLLHSVFNFLAFKNDISFWKDKK
RSLEGISVRGMLVNLFFQAVIFLYLADNDTTYMILVTNAIGLAIEASNLL
LFVWKVGRFMVGRLDWGGEDGQPRRWIPRMTLQAKESYRKSKTKEFDDVA
TAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTP
QLFINYKVSGA*
back to top

mRNA from alignment at E_fasciculatus_S2_contig9810:1370..5686+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9810.17818.1 ID=mRNA_E_fasciculatus_S2_contig9810.17818.1|Name=mRNA_E_fasciculatus_S2_contig9810.17818.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4317bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9810:1370..5686+ (Ectocarpus fasciculatus EfasUO2)
ATGATTAACTACTGGAAGCCTACGCTGACCTTGGGGCAGCTGGACTTCAC GGCGATATTTCAGCGCAACCACATCCCGTCGTCCTTCGCCGGCCACATCA CCTTCCAATCGTAAGTATAGAGTACCATCAGAGCTCGTATAGCACGAGCT ATTAGAGGCGGTTAGTCAGAGCTCACATTTTGGACTGTTGTTGTTGGTAG CGTTGTCGTCGTCGTCTTGTTCGTCTTCGCTGTTGTCGGTGGTACCAACA GTCTCTCCTTTTGGTACTCATCCGTACGGCGGTAGACAATATCTCCGTGT TGATGGGCTGGCACAAGCATGCCAGCAGAAATGGCCATTGAGTCGCAGTC GGTCAAGTTCTCTCAGCAGAGGACGAAAACGGCCCATCAAGAACTATCAG TTGAAAACCATCCTTATACGCTGCTGTGCACTTGTTTTTTTTGTGTGGGT GGACGTTTGTGTTGTTGTCGTTTTCACCAGATCTACGGGCAACTATCACC CGGTGCTCTATGTGAACGAGTTCTGGCTGCAGCAGAAGCACCTGCTGGCT CTCAACTCGACGGTGGAGTCGGTAGACCTGGAGCTGAGCATCTCTCCCAT CAGCCTGTGGAAGTTTCAGGTTTGTGTGTGCGACGGGCGACAAATTTCGA GAATTTTGGTCGGCTGCTGCTCCGGGTTGGCTCATCATTGATTCGACCCT AGAAAACGTAAGAAGGCGATTCGCCGCTTGGAGTTGGACACTCCAGTGTG TGTGTGTGGGGAAGGGGTAAGAGGTTTGTGTGGTTTGTCTATTCCCCCAG TTTAGTCATCCAATGCGGAGACTTGGCCGACCTCGACTCATCTGCCATGC TGCTAACGGCAGAGGCCGGTGTTTCCGTTGATGGAACGGTACAATAATAC TCCGTCTTCAGGTTCACGGATCGAGAACGATCTAAATGAGGTATCTATGT AGTTTGTGCATTCGGCGATCTCTCGAAACCCAAGGGTCCCTCTCTCTTCC GCGTTGCACCTCCGCCTCTGAAAAAATCAAAACAAGCCCGATACCGAATC GTCGTCTTGTTTACGACATTTTTTAACAACTAGATCGAGTGGGTCGAATC AATCACTCAAGCGATTAACTCTTTTGTTTTTTATTGTTGGCGGTGCTCGC CCTCTGCTGCGTGCGCGCGGGGACCGTATGCAAACCCTTCTTTTGGTACT GGGGCGGGGGGGTGCGCAGACAATGTCGCAGCTGGAGAGCCAGTGGGCCG CTCAGACTAAGATCGGCATGGCGGGGGACGGCGAACAGGACACCTTCAGG GAGGTGGGTGTCGGTTGGGCTTTGACTGCGTATGTAACGACCGCTCTCGC CGCTTTTTACGACAACCTTGCTGCGGTCGGCTGCCAGCCTTTTCTTGGAC GTTTTTTTTTCATCATTTTTCTTTTGCGGGGGGGGGGATGAGAGCTGCAC GCTGTTGTCGACACGTTGGTACCTTTGGTTTTGAGCGCGAAGTTTAGTCA GTCTACTGTACGGCATGAAGACAGAATTACGTGTGTGTTTGTTGAGATGT TTCCAGTGCTCGATACGCGGGAGGCCTTCCGCGTTTGCTGTTTGCTGTTT CCCGTTGACGTTGTTTCGGTGTTCTTTCGTCTTTCGTCACCCATCGGTGA CCCTTTGCGATTCTGTTGAGTCACTTGTTCTGTTTGTTGAGTCACTTGTT CTGTTTGTTGAGTCACTTGTTCTGTTTGTTGTTGTTGTTGTTGTTGGGGT TGTTGTTGCTGCTGTAATTGTTATAGTCGTGCCCACCAACCACGCCTTTG GCACTATGGTCCTTACATATACCAACCCTCCGTGACAAAGTGTGGTGTGT GCTGTCTGGCGCAACCACCAGCCCGTCATGTCGTGTGTAAGTTGCAAAAA ATCTTGCTCTAAACCGTCCCAGTACAACTTTTTTTTTTATCCTTTGTGTT TGATCTTTGTCCTTAACGTTGAGATGAACCAAACCCGGTCCTTGGTGGTG ATCATTGTCACGACTTAGAATATAAAACCAAACGTTTTGTACGCGGCTGT CTCTCCTCGGTCTCCGCCCAAATCGACGCGCAGCTGCTGGCGGAGACCAA CCCGATCGTGCTGGTGATCACCATGATCGTGTCGCTGCTGCACTCGGTGT TCAACTTCTTGGCGTTCAAGAACGACATCTCCTTCTGGAAGGACAAGAAG AGGTACGGTAGTAGTACTGGCTCATTCCGCCGTCGCCCTAGTCAGGAAAA GGTGTATAGGTGGGCGGCTTCCCCTTTGGTTTCGAACAATCGATCAATCC ACCATGTAGATACATCTGGGGCCGAACTTTAGCTTTGAGATATATACAGC CCCGGAACATGTCGAAGCACAGGAATAACGTAGCACAACCTTTCCAGGCC CGCCTCACTTCGACCCTGTTCGAAACCTACGACAGTTACTACTATGTTGT GTTGCTAGAGGGGGTAAGAATCACGGTCTTGGGGCAGCTGATGTGTCGCG GCCTTTGGCTGCAGGTTATTTTTTTTTTTACACAAAGAGAGTTAGACCTA AGGGTCACCCAGGGGGGGGGCAGTGACGTGCATATCTGCTTCAAGGAGTC ACCGTAGGGTGCTTGAGATACTACACACCCTGCATCGACTTCACAACTCG GTCGCTCTGCAGTGGCAGTGCCGAAAAGTTGCGGCGTTGGAATCGCCTCG TGGAGAGCATTCCGAAAACGCAACATTTGGATTGATGATGGCATCTTCGT TGTCGTGGAGTAATCGAATCGAGCTAGCTTTTAAGAATCAGTCCAGGCGG TGTGGTCCTATGCAACATACGGTGGTAGTCGTGACGGGTGTGCTGCCACG GTGTGCGTCTACTATTGTACAATGCCCATGTTATGTCTTTCCCGGGCAAA AAAACAATAACAACACACGTCCGTGTGCGCACGCACCCGTACACAAACAG CTGGTGCTTCGCCGCTTCTTGTGTAAACAGTAGACGCCCACGTACGGTCT GCTGTGTTGTGATATCCCCGCGTTGTCCTTTGTGTGTCATGTTCGTCTTG TAGATCGTTGGAGGGCATTTCCGTGCGGGGCATGCTGGTCAACCTGTTCT TCCAGGCGGTGATCTTCCTCTACCTCGCGGACAACGACACGACGTACATG ATTCTCGTCACCAACGCCATCGGGCTGGCCATCGAGGCAAGTAACCTCTT GTTGTTTGTTGTTCTTGAGGGTGGTGGTGTTAGTGGGGCTGGTGCTGGTG CTGGTGCTGGTGCTGCCATGGTCAAGTAACCTGTTGTTGATGTTGGTGGT GGTGGTGGTGGTGGTGGTGGTGGTGCTGCTGCTGCTGCTGCTGCTGTCGT CGTGGTTACACCGCCATCGTCGCCGTTTGTTGCGGCCTTTGGAACTACTT TGTCGCGACTGGATTGGATTGATGCATGGCGTGCTTTGGTGCGACAGCAG CAGCAGTGCGGGTGTGATAGGGTGTAGTTTGATTCTGTGTCTCTTTTGAT ACCGCGCACACTTGCAAAAACACAAATACTTCCATTCCATCGAGGGCTTT CCAACTTTATCGCCCCTGTGGTGCTCTACATGCTGCCGTGTGCAGGTTTG GAAGGTGGGTAGGTTTATGGTCGGGCGGCTGGACTGGGGAGGCGAGGACG GGCAGCCACGCCGATGGATCCCGAGGATGACTTTGCAGGCTAAGGAGAGC TACCGCAAGGTGAACATGGTGTTTCGTTTTTTGTTTTTTATCATAATTTG TTGCTGGTGGTTATGGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTGGTTGTTGTAAAATGACCCGCCCAATACTGACACTTGAAATTCCT GCCCTATTACTATTGTCATTATCCGTACACCGCAGTGTTTTTCGCATCCG AACCAACCAACCGCCGATGCTCCTGGCAATTCCTGCCCAAATCTGTCTGA TAATTCCTACTATTGGTAATTGTGGTATTAAACGAAACAGAACCACGCCA CACACCACCCGCACACCACACCACACCATCTTTTACGCACCCGAACCACT CAACCAACCACCGATGATGCTCCCTCCCGAAACGGGACGACCACTGACCA GAGCAAGACGAAGGAGTTCGACGACGTCGCGACGGCGCACCTGCTGTATC TGGTGGGCCCGCTGATGGTCGGCTACGCCGCGTACTCGCTGCTGAACCAG CAGCACCGGGGGTGGTACAGCTGGGTGCTCAACTCGCTCGTCGGGTTCGT GTACATGTTCGGCTTCGTCATGATGACGCCCCAGCTCTTCATCAACTACA AGGTCAGCGGTGCATAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9810:1370..5686+

>mRNA_E_fasciculatus_S2_contig9810.17818.1 ID=mRNA_E_fasciculatus_S2_contig9810.17818.1|Name=mRNA_E_fasciculatus_S2_contig9810.17818.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=936bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9810:1370..5686+ (Ectocarpus fasciculatus EfasUO2)
ATGATTAACTACTGGAAGCCTACGCTGACCTTGGGGCAGCTGGACTTCAC
GGCGATATTTCAGCGCAACCACATCCCGTCGTCCTTCGCCGGCCACATCA
CCTTCCAATCATCTACGGGCAACTATCACCCGGTGCTCTATGTGAACGAG
TTCTGGCTGCAGCAGAAGCACCTGCTGGCTCTCAACTCGACGGTGGAGTC
GGTAGACCTGGAGCTGAGCATCTCTCCCATCAGCCTGTGGAAGTTTCAGA
CAATGTCGCAGCTGGAGAGCCAGTGGGCCGCTCAGACTAAGATCGGCATG
GCGGGGGACGGCGAACAGGACACCTTCAGGGAGCTGCTGGCGGAGACCAA
CCCGATCGTGCTGGTGATCACCATGATCGTGTCGCTGCTGCACTCGGTGT
TCAACTTCTTGGCGTTCAAGAACGACATCTCCTTCTGGAAGGACAAGAAG
AGATCGTTGGAGGGCATTTCCGTGCGGGGCATGCTGGTCAACCTGTTCTT
CCAGGCGGTGATCTTCCTCTACCTCGCGGACAACGACACGACGTACATGA
TTCTCGTCACCAACGCCATCGGGCTGGCCATCGAGGCAAGTAACCTCTTG
TTGTTTGTTTGGAAGGTGGGTAGGTTTATGGTCGGGCGGCTGGACTGGGG
AGGCGAGGACGGGCAGCCACGCCGATGGATCCCGAGGATGACTTTGCAGG
CTAAGGAGAGCTACCGCAAGAGCAAGACGAAGGAGTTCGACGACGTCGCG
ACGGCGCACCTGCTGTATCTGGTGGGCCCGCTGATGGTCGGCTACGCCGC
GTACTCGCTGCTGAACCAGCAGCACCGGGGGTGGTACAGCTGGGTGCTCA
ACTCGCTCGTCGGGTTCGTGTACATGTTCGGCTTCGTCATGATGACGCCC
CAGCTCTTCATCAACTACAAGGTCAGCGGTGCATAG
back to top