mRNA_E_fasciculatus_S2_contig981.17813.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF2_ECTSI) HSP 1 Score: 365 bits (938), Expect = 9.190e-120 Identity = 182/192 (94.79%), Postives = 186/192 (96.88%), Query Frame = 2
Query: 107 MALISGLFHESEAKNRLAEERRDQKYGGEQKVDTMVDLSEESMPGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRGPITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWEKAPVIQMYQWAGLIFMIGIVIYVLFFDDEEDILRKSLESSREL 682
MALISGLFHE EAK RLAEERRDQKYGGEQKVD+M+DLSEES+PGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRGPI FALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWEKAPV Q+YQWAGLIFMIGIVIYVLF DDE DILRKSLESSREL
Sbjct: 1 MALISGLFHEGEAKTRLAEERRDQKYGGEQKVDSMIDLSEESIPGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRGPIKFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWEKAPVFQIYQWAGLIFMIGIVIYVLFVDDEGDILRKSLESSREL 192
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6T0HFP5_EMIHU) HSP 1 Score: 130 bits (328), Expect = 9.560e-32 Identity = 69/132 (52.27%), Postives = 88/132 (66.67%), Query Frame = 2
Query: 245 LMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWEKAPVIQMYQWAGL----IFMIGIVIYVL 625
L K++VR G GE P G SV VHYTG L DG+ FD+S RG PI F LG GEVI GWD VS+MQ GE A+LT+ PE+GYG GPIP NATLTFE+E++ + +++ GL +F +G++IY L
Sbjct: 10 LTKRVVRAGTGECPSEGQSVEVHYTGSLADGSVFDSSRSRGKPIDFTLGMGEVIPGWDLGVSSMQVGEAAVLTIPPEFGYGSSGAGPIPPNATLTFEVELVSAADPALPASFKY-GLPVVALFALGLIIYHL 140
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEN7_DIALT) HSP 1 Score: 129 bits (324), Expect = 4.120e-31 Identity = 61/103 (59.22%), Postives = 76/103 (73.79%), Query Frame = 2
Query: 245 LMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGW 550
L KK+ R GNG+ P GS+V+VHYTGKL DG FD+S RG P +F L +G VI GWD V+TM GE+A+LT+ PE GYG RA GPIP N+TLTFE+E++ W
Sbjct: 16 LTKKVTRAGNGQRAPSGSTVNVHYTGKLADGKVFDSSRTRGQPFSFELEQGNVIAGWDRGVATMTVGEQAVLTIAPELGYGSRAVGPIPPNSTLTFEVELVSW 118
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: peptidyl-prolyl (cis-trans isomerase FKBP5-like n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9C53F) HSP 1 Score: 131 bits (329), Expect = 1.380e-28 Identity = 65/115 (56.52%), Postives = 85/115 (73.91%), Query Frame = 2
Query: 212 VDLSEESMPGVLMKKIVRPGNGELPPV-GSSVSVHYTGKLKDGTEFDTSAGRGPITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGPIPANATLTFEMEVMGWE 553
+D+S GVL K+I++PG G+L P GS+V+VHYTG L DGT+FD+S RGP +F+LG+G VI+ WD V+TM+KGE LT PEY YG R TG IPAN+TL FE+E++ WE
Sbjct: 10 IDISPAQDGGVL-KEIIKPGAGDLTPSNGSTVNVHYTGTLVDGTKFDSSRDRGPFSFSLGQGSVIKAWDIGVATMKKGEICKLTCLPEYAYGSRETGSIPANSTLIFEIEMLDWE 123
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PR76_CAVFA) HSP 1 Score: 117 bits (292), Expect = 1.950e-27 Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 2
Query: 242 VLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGP-IPANATLTFEMEVMGWE 553
+L+KKI G+G PPVGSSV+VHY G+L +GT FD+S RG P +F LG G+VI+GWD V+ M KGE + LT+ P+YGYG R G IP NATL FE+E++ W+
Sbjct: 5 ILIKKI---GSGVKPPVGSSVNVHYVGRLTNGTVFDSSRKRGAPFSFKLGAGQVIKGWDEGVAQMSKGETSELTISPDYGYGARGAGNVIPPNATLIFEVELIDWK 107
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FIA7_MICCC) HSP 1 Score: 115 bits (287), Expect = 1.540e-26 Identity = 57/110 (51.82%), Postives = 79/110 (71.82%), Query Frame = 2
Query: 239 GVLMKKIVRPGNG-ELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGR-ATGPIPANATLTFEMEVMGWEKA 559
G ++KK+ + G G E P G+ V+VHY G L+DGT+FD+S RG PI F LG G+VI+GWD V++M+KGE+A LT+ PEYGYG A G IP ATL F++E++ W+ +
Sbjct: 15 GGVVKKVTKDGEGTERPGKGAEVAVHYVGTLEDGTKFDSSVDRGEPIRFTLGVGQVIKGWDLGVASMRKGEKATLTIKPEYGYGDAGAGGVIPGGATLLFDVELVEWKSS 124
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9S0Q4_AMBAM) HSP 1 Score: 115 bits (287), Expect = 2.860e-26 Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 2
Query: 245 LMKKIVRPGNGELPPV-GSSVSVHYTGKLKDGTEFDTSAGRGPITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGP-IPANATLTFEMEVMGWE 553
++K+IVR G G+ P+ G+SVSVHYTGKL DGTEFD+S RG F LG G VI+ W+ + TM+KGE AI T +YGYG + + P IP NATL FE+E++ W+
Sbjct: 2 VLKEIVRAGTGDETPLDGNSVSVHYTGKLLDGTEFDSSRKRGKFDFTLGNGSVIKAWEIGIKTMKKGEVAIFTCQSDYGYGVQGSPPKIPPNATLIFEVELLDWK 106
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7BCQ6_9COLE) HSP 1 Score: 126 bits (316), Expect = 4.250e-26 Identity = 65/116 (56.03%), Postives = 81/116 (69.83%), Query Frame = 2
Query: 212 VDLSEESMPGVLMKKIVRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRATGP-IPANATLTFEMEVMGWE 553
VD+S GVL K+I+ G+GE PP G V VHYTG L +GTEFD+S GRG P F LGKG VI+ WD V+TM+KGERA LT PEY YG + P IP ++TL F++EV+GW+
Sbjct: 704 VDISPNGDGGVL-KEIITEGSGEQPPTGCKVQVHYTGTLLNGTEFDSSRGRGAPFEFDLGKGSVIKAWDIGVATMKKGERATLTCAPEYAYGKTGSPPSIPPDSTLKFDVEVLGWK 818
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WYV9_OIKDI) HSP 1 Score: 113 bits (282), Expect = 4.410e-26 Identity = 53/100 (53.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query: 260 VRPGNGELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRA-TGPIPANATLTFEMEVMGWE 553
++ GNG++PP GS V VHYTG L DG++FD+S RG P F LG+G+VI+GWD V+ M G+RA LT P+Y YG R G IPAN+TL F++E++G++
Sbjct: 8 MKEGNGQIPPAGSKVQVHYTGTLTDGSKFDSSRDRGKPFEFVLGQGQVIKGWDEGVAQMSIGQRAKLTCSPDYAYGSRGFPGLIPANSTLVFDVELLGFK 107
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Match: Peptidylprolyl (isomerase n=2 Tax=Naegleria TaxID=5761 RepID=A0A2H4A315_NAEFO) HSP 1 Score: 113 bits (283), Expect = 4.610e-26 Identity = 57/106 (53.77%), Postives = 73/106 (68.87%), Query Frame = 2
Query: 245 LMKKIVRPGNG-ELPPVGSSVSVHYTGKLKDGTEFDTSAGRG-PITFALGKGEVIRGWDYAVSTMQKGERAILTVGPEYGYGGRAT-GPIPANATLTFEMEVMGWE 553
L KKI+ G+ E PP+GS VSVHYTG L G +FD+S RG P F LGKGEVIRGWD V +M+KGE++ + +Y YG A G IPAN+TL FE+E++ W+
Sbjct: 14 LKKKIITAGSSDEQPPIGSKVSVHYTGTLTSGKKFDSSLDRGQPFVFTLGKGEVIRGWDLGVKSMKKGEKSYFEIPSDYAYGNNAIPGLIPANSTLMFEIELLSWK 119 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig981.17813.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig981.17813.1 >prot_E_fasciculatus_S2_contig981.17813.1 ID=prot_E_fasciculatus_S2_contig981.17813.1|Name=mRNA_E_fasciculatus_S2_contig981.17813.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=193bp MALISGLFHESEAKNRLAEERRDQKYGGEQKVDTMVDLSEESMPGVLMKKback to top mRNA from alignment at E_fasciculatus_S2_contig981:9241..12620- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig981.17813.1 ID=mRNA_E_fasciculatus_S2_contig981.17813.1|Name=mRNA_E_fasciculatus_S2_contig981.17813.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3380bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig981:9241..12620- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig981:9241..12620- >mRNA_E_fasciculatus_S2_contig981.17813.1 ID=mRNA_E_fasciculatus_S2_contig981.17813.1|Name=mRNA_E_fasciculatus_S2_contig981.17813.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=579bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig981:9241..12620- (Ectocarpus fasciculatus EfasUO2)back to top |