mRNA_E_fasciculatus_S2_contig981.17812.1 (mRNA) Ectocarpus fasciculatus EfasUO2
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: Fe-ADH (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9A2_9PHAE) HSP 1 Score: 733 bits (1892), Expect = 6.300e-262 Identity = 387/431 (89.79%), Postives = 403/431 (93.50%), Query Frame = 3 Query: 21 MRCRLVNIRRSFSSRPGPTPKLIVEADCSWTKVVAQVASHGRTCLAVADENAPGQAAGRCLFELQKAGINCAMFTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVLMGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPAQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLGQANSFSGDAQAAEAIERALSLSASLFLGDGNDGPALLSWLEAQGREWLDFASLSSVDSTISAKDVATNIDMLLAIEEDTDAADRVWSAGGTADMAELIVG 1313 MRCRLV+IRR SS P P+PKLIVEADCSWTKVVAQV+ HGRTCLA+AD+N PGQA GRCLFEL+KAGINCAMFTGRGAYPT DGIDEAREMARRIGATCIVSVG GGTIDTAKAAARLH+SSGGCK FLTSPGGVLMGE G+SKPR PAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPL AEEGESL VALVDP+LCTSLSK+QT AMA+TALSACVDALLARELALASG PLQNGDALLDLGRRGI A+AEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPP QLVARATGSLLGRHSYPSVCAMVFPHVVGDML QANSFSGDAQAAEAIERALSLSASLFLGDGNDG AL+SWLEAQ RE LDF SLSSVDSTI+AKDV TNIDMLLAIEEDT AADRVWSAGGT+DMA+ IVG Sbjct: 1 MRCRLVSIRRKLSSCPSPSPKLIVEADCSWTKVVAQVSRHGRTCLAIADDNTPGQAVGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEDGHSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPL---AEEGESLTVALVDPILCTSLSKSQTAAMALTALSACVDALLARELALASGTPLQNGDALLDLGRRGIDAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQANSFSGDAQAAEAIERALSLSASLFLGDGNDGQALMSWLEAQERELLDFGSLSSVDSTITAKDVVTNIDMLLAIEEDTAAADRVWSAGGTSDMADHIVG 428
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: Iron-containing (alcohol dehydrogenase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7C4R5N7_9DELT) HSP 1 Score: 78.2 bits (191), Expect = 1.190e-11 Identity = 87/239 (36.40%), Postives = 115/239 (48.12%), Query Frame = 3 Query: 180 GQAAGRCLFELQKAGIN-CAM--FTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVL-MGEG-GNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAG 881 G GR F L+ + CA+ F RG PT + + A E AR GA +V++G G IDTAKA SG C T+PG L EG G KP G LP VA+PT+AG+GA A ++ P V L +A+VDP L L A T A M AL+ ++A ++R PL + L R GI A LPVA+ADG ++ ARE + + S+ G Sbjct: 81 GATPGRAAFLLEALALRGCAVKAFAVRGE-PTLETVGVALEEARAWGAEALVAIGGGAVIDTAKAV------SGWC----TNPGDPLDFLEGIGKGKPLERPG--LPWVAVPTTAGSGAEATRNAVIRVPARRAKVSLRSPHLLPR---LAVVDPELTLELPPAVTAATGMDALAQLLEAFVSRR-----ANPLTDA-----LCREGIPRAARALPVAVADGSDRRAREAMALASLFGG 293
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: Iron-containing (alcohol dehydrogenase n=1 Tax=Pseudodesulfovibrio cashew TaxID=2678688 RepID=A0A6I6JIR1_9DELT) HSP 1 Score: 73.9 bits (180), Expect = 2.320e-10 Identity = 70/224 (31.25%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 210 LQKAGINCAMFTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVLMGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAG 881 L K + +F P +D +DEA ++ R G +V +G G TID+AKA A + A+ G ++ S G GG P R +ALPLVAIPT+AG G A+ ++ D + G + A+++VDP+L S+ QT M A +A LA AS + L + +A LP A+A+ +N AR ++ S AG Sbjct: 57 LAKQEVQTIVFDKIAPNPESDDVDEAAKICRETGVDFLVGLGGGSTIDSAKAIALMAANPGTYWDYMQS------GSGGGKMPER---DALPLVAIPTTAGTGTEADPWAVITRSDSAEKI---GWGNDSTFPALSIVDPVLTISVPPRQTAYTGMDAFFHATEAYLATCRQPASDM----------LALEAVHLIAHTLPEAVANPENLEARTVMAWASTAAG 258
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: Alcohol (dehydrogenase n=1 Tax=Anaerosolibacter carboniphilus TaxID=1417629 RepID=A0A841L4T5_9CLOT) HSP 1 Score: 72.8 bits (177), Expect = 4.710e-10 Identity = 69/246 (28.05%), Postives = 115/246 (46.75%), Query Frame = 3 Query: 207 ELQKAGINCAMFTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVLMGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPAQLVARATGSL 944 +L+ GI +F G P T+ +D+ R M +V +G G +D AKAAA L+ + +L N +P G +P VAIPT+AG G+ +++HP+ L A G ++VDP+L S++ T M AL+ V++ ++ +A+ V + + + I +AEGLP+A+ DG +K+AR + +GS+ A T A ++ G+L Sbjct: 53 DLEYYGIKHYVFDGIYGEPDTEMVDQVRRMIEEEKIDFVVGLGGGSALDVAKAAAGLYGQNLPTAEYL------------NQRPFEYQG--IPFVAIPTTAGTGSEITLNAVLYHPE---LGNKNSLAHPGFQSKCSIVDPVLTYSMAPEITAMTGMDALTHAVESYTSK---MANPVTMA-------MAGKAISLIAEGLPMAVKDGSDKMARSKMALGSMMAALAFAQTGVGVAHAISHPLGAL 271
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: iron-containing (alcohol dehydrogenase n=1 Tax=Bradyrhizobium mercantei TaxID=1904807 RepID=UPI0009756A41) HSP 1 Score: 71.6 bits (174), Expect = 1.210e-9 Identity = 100/364 (27.47%), Postives = 151/364 (41.48%), Query Frame = 3 Query: 195 RCLFELQKAGINCAMFTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVLMGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPAQLVARATGSLLGRHSYPSVCAMVFPHVVGDML--GQANSFSGDAQAAEAIERA-LSLSASLFLGDGNDGPALLSWLEAQGREWLDFASLSSVDSTISAKDVATNIDMLLAIEEDTDAADRVWSA 1277 R ++K G +F A P + A ++AR +G C+V +G G +IDTAK + S + GN R GN LPLVAIPT+AG G+ ++ + +E A +AL+D L + + T A A+ A+ C++A +R P+ + AL +G+ L E P+ L+DGKN AR + +G+ AG + + G++ G SYP PH + L G F+ A A E E A + L F G A +S LE E S +++ +SA V T D+ EE T R+ +A Sbjct: 50 RAAHAMRKGGTATTIFDQVAADPPYSVVRAAVQLARNVGCDCVVGLGGGSSIDTAKVVSVSINSEQSLDDMV-----------GND---RVEGNRLPLVAIPTTAGTGSEVTFVSVLTNDANEKRAIFAPQLMPD----IALLDAELTLGMPRHVTAATALDAMVHCIEAFTSRT----RKNPISDAVAL-----KGLALLVENFPIVLSDGKNLQARNAMLLGATLAGMA----------FINASVGAVHGL-SYPLGARFHVPHGHSNALVMGAVFRFNLPAAAKEYAELAPVVLPGKRFSSPGAAADAFVSRLEEMLAE-------SGLETRLSALGV-TEADVEPMAEEVTQKITRLIAA 367
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: iron-containing (alcohol dehydrogenase n=1 Tax=Paucidesulfovibrio longus TaxID=889 RepID=UPI0003B3CF92) HSP 1 Score: 70.1 bits (170), Expect = 4.070e-9 Identity = 66/224 (29.46%), Postives = 103/224 (45.98%), Query Frame = 3 Query: 210 LQKAGINCAMFTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVLMGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAG 881 L + G+ +F P +D ++EA R++G +V +G G +IDTAK+AA L A+ G ++ G GG P PA LP+VAIPT+AG G A+ ++ + + G + A+++VDP L SLS QT M A V++ L + P+ + L + + + LP A+ +G + AR L S AG Sbjct: 57 LAERGVRSVVFDKVRPNPESDMVEEAAGTCRKLGVDFLVGLGGGSSIDTAKSAALLAANEGSYWDYMQG------GSGGKKTPEHPA---LPVVAIPTTAGTGTEADPWTVITKSGSKEKI---GFGNDSTYPALSIVDPNLMVSLSPRQTAFTGMDAFFHAVESYLNT-----TRSPMNDM-----LAMEAVNLIGQYLPAAVNNGSDMEARTALAWASTAAG 258
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: Alcohol (dehydrogenase n=3 Tax=unclassified Halobacteriales TaxID=38063 RepID=A0A2R6GGT4_9EURY) HSP 1 Score: 69.7 bits (169), Expect = 5.500e-9 Identity = 108/403 (26.80%), Postives = 167/403 (41.44%), Query Frame = 3 Query: 78 PKLIVEADCSWTKVVAQVASHGRTCLAVADENAPGQAAGRCLFELQKAGINCAMFTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVLMGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPAQLVARATGSLLGRHSYPSVCAMVFPHV--------------VGDMLGQANSFSGDAQAAEAIE---RALSLSASLF--LGDGNDGPALLSWLEAQGREWLDFASLSSVDSTISAKDVATNIDML 1229 P+ +V + +V ++ G T L VA G+ R L AGI+ A++ PT + + EA E R G C+V++G G IDTAKA L A+ G + + G EG PA + PL A+PT+AG G+ A R +V + L + E ++AV DP L +L + T + AL+ ++A V + L R I + LP + A+G + ARE + +G + AGQ +AR G+ L + ++ P+V V +LG A + D +AA+A R L SL+ L + + P ++++A G E D A S K A I+ L Sbjct: 10 PEQVVVGRGAVDEVGDRLGERGSTALIVATGGVFGRYGDRVRDSLAAAGIDAAVYDEVRPDPTVENVREALETYRASGCDCLVALGGGSPIDTAKAVGVLAANGGEIREYAVDRAGY---EG------VPA-SIPPLAAVPTTAGTGSEAT-RSIVISDESTATKFLVVSTEVLPTVAVE--DPELVATLPPSHTAFTGVDALTHAIEAY----------VSVHAWSMSDTLARAAIERVGTALPASWANGDDLDAREAMLVGQLQAGQAFTNASVALVHGMARPFGAQL-HLPHGLANGVLLPYVMEFSRPGAEERYADVARLLGAATDEATDREAAKAAAGAVRELCRDVSLYDYLAEFGEVPDRAAYVDAVG-EMADDAIASGSPDNNPRKPTAAEIEEL 387
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: Iron-containing (alcohol dehydrogenase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6PES3_9BACT) HSP 1 Score: 69.3 bits (168), Expect = 6.980e-9 Identity = 63/231 (27.27%), Postives = 99/231 (42.86%), Query Frame = 3 Query: 189 AGRCLFELQKAGINCAMFTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVLMGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAG 881 AGR L+ AG+ +F PTT +++ +AR G CIV +G G ++DTAK GC LT+ GG + G K +P LP +AIPT+AG G+ L+ DE+ + + +A++DP L S T + A++ V+ S V + + + L G PV +++ N AR + +G+ AG Sbjct: 60 AGRVRASLEAAGLRVTLFDKARENPTTKCVEDCVLVARAAGIDCIVGLGGGSSMDTAK----------GCNFILTN-GGQMKDYWGVGKAMKPM---LPFIAIPTTAGTGSEMQSAALIA---DEITHQKMACLDPNCAARMAILDPTLTLSQPPRVTACTGIDAIAHAVE----------SAVTTKRNELSQKISSEAFKLLVAGFPVVMSEPGNLAARSQMQLGAAYAG 263
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: Alcohol (dehydrogenase n=2 Tax=Pseudodesulfovibrio TaxID=2035811 RepID=A0A126QSC4_9DELT) HSP 1 Score: 68.6 bits (166), Expect = 1.280e-8 Identity = 67/224 (29.91%), Postives = 101/224 (45.09%), Query Frame = 3 Query: 210 LQKAGINCAMFTGRGAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVLMGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAG 881 L K + +F P +D +DEA + R G +V +G G TID+AKA A + A+ G ++ S G GG +P +ALP+VAIPT+AG G A+ ++ + + G + A+++VDP L S+ QT M A +A LA AS + L + +A LP A+A+G N AR ++ AG Sbjct: 57 LSKQDVQTIVFDKIKPNPESDAVDEAAAICRDKGVDFVVGLGGGSTIDSAKAIATMAANKGKYWDYMQS------GSGGGQEPEN---DALPIVAIPTTAGTGTEADPWTVITKSGTDSFEKI-GWGNDATFPALSIVDPELMRSVPPKQTAYTGMDAFFHATEAYLATCRQPASDM----------LALEAVHLIAHTLPQAVAEGDNLEARTIMAWACTAAG 260
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Match: Iron-containing (alcohol dehydrogenase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V2N505_9BACT) HSP 1 Score: 68.2 bits (165), Expect = 1.600e-8 Identity = 81/256 (31.64%), Postives = 117/256 (45.70%), Query Frame = 3 Query: 252 GAYPTTDGIDEAREMARRIGATCIVSVGSGGTIDTAKAAARLHASSGGCKHFLTSPGGVL-----MGEGGNSKPRRPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAGAAEEGESLAVALVDPMLCTSLSKAQTVAMAMTALSACVDALLARELALASGVPLQNGDALLDLGRRGIGALAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPAQLVARATGSLLGRHSYPS--VCAMVFPHVV 998 G PTT G+ AR G ++++G G ID KA A + LT+PG +L +G G + RP +PLVA+ T+AGAGA ++ PD +V V + A VALVDP L S+ T A + AL+ ++A + R+ PL +G R G+ A L A ADG + AR +++ ++ G +A+A A V G L G P +CA + PHVV Sbjct: 66 GGEPTTSGVQALAAEARDAGVDHVIAIGGGSVIDAGKAVAAM----------LTNPGDLLDYLEVVGRG-RALAHRP----VPLVAVSTTAGAGAEVTRNAVLKVPDRQVKVSMRHA---WLLPTVALVDPELTASMPPEVTAATGLDALTQLLEAFVGRK-----ANPLTDGFC-----REGLSRAARSLERAWADGGDLTARTDMSLAALLGG-MALANAGLGA--VHGFAGPLGGIIEAPHGVICARLLPHVV 290 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig981.17812.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig981.17812.1 >prot_E_fasciculatus_S2_contig981.17812.1 ID=prot_E_fasciculatus_S2_contig981.17812.1|Name=mRNA_E_fasciculatus_S2_contig981.17812.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=432bp MRCRLVNIRRSFSSRPGPTPKLIVEADCSWTKVVAQVASHGRTCLAVADEback to top mRNA from alignment at E_fasciculatus_S2_contig981:4218..8592- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig981.17812.1 ID=mRNA_E_fasciculatus_S2_contig981.17812.1|Name=mRNA_E_fasciculatus_S2_contig981.17812.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4375bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig981:4218..8592- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig981:4218..8592- >mRNA_E_fasciculatus_S2_contig981.17812.1 ID=mRNA_E_fasciculatus_S2_contig981.17812.1|Name=mRNA_E_fasciculatus_S2_contig981.17812.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1296bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig981:4218..8592- (Ectocarpus fasciculatus EfasUO2)back to top |