mRNA_E_fasciculatus_S2_contig9803.17809.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9803.17809.1
Unique NamemRNA_E_fasciculatus_S2_contig9803.17809.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN1_ECTSI)

HSP 1 Score: 564 bits (1453), Expect = 1.180e-186
Identity = 271/273 (99.27%), Postives = 272/273 (99.63%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKV+FSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEM LPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF
Sbjct:  533 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVEFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMNLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 805
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BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW11_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 2.020e-129
Identity = 198/275 (72.00%), Postives = 227/275 (82.55%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFET--CPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF++R CLTVSGQLNVET+  ++ DVYTFGPTFRAENSHTSRHLAEFWMIEPE+AFADL+DDM+LAEDYLKYLVA+AL HC  DL +FE+  CPGGE  LR RL+NVL+NDFVR+TYT  V L+ +    GKVKF     WG DL SEHERY+ E VY  P +VT+YPK+IKAFYMKL+ DGKTV+AMDILVPKIGEIIGGSQREE    L++RA  M L   +ISWY DLRRYGT++HAGFGLGFERL++F TGIENIRDVIPFPRYPGH  F
Sbjct:  492 DFFSKRACLTVSGQLNVETYCSAMSDVYTFGPTFRAENSHTSRHLAEFWMIEPEIAFADLEDDMNLAEDYLKYLVAHALEHCDEDLTYFESKDCPGGEADLRARLRNVLENDFVRITYTRAVALLEEHIASGKVKFQNPVSWGVDLASEHERYITETVYKCPVVVTNYPKEIKAFYMKLDADGKTVSAMDILVPKIGEIIGGSQREESFDVLSQRAAAMGLEPAAISWYADLRRYGTMKHAGFGLGFERLILFITGIENIRDVIPFPRYPGHCEF 766
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABG7_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 2.280e-128
Identity = 192/273 (70.33%), Postives = 217/273 (79.49%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF +R  LTVSGQLNVETHAC+L DVYTFGPTFRAENSHT RHLAEFWMIEPE+ FADL DD++LAEDYLKY V +AL +C  DLEFFE  P GE GLRERLKNVL N F R+TYTE +++++K  KE  V F   P WG DL SEHERY+ EKVY  P ++ DYPKDIKAFYMKLN D KTVAA DILVPKIGEIIGGSQRE  +  L  R +EM L    + WYLDLRRYGT+ HAGFGLGFERL++F TG++NIRDVIPFPRYP +A F
Sbjct:  126 DFFGKRVNLTVSGQLNVETHACALSDVYTFGPTFRAENSHTGRHLAEFWMIEPEICFADLADDINLAEDYLKYCVRFALENCAEDLEFFENSPHGEVGLRERLKNVLDNPFKRLTYTEAIEVLQKAVKEDGVVFEEEPIWGIDLPSEHERYLCEKVYKKPVVLMDYPKDIKAFYMKLNDDKKTVAAADILVPKIGEIIGGSQREHRMDVLKTRCEEMGLDAKQVWWYLDLRRYGTVPHAGFGLGFERLILFITGLQNIRDVIPFPRYPQNAEF 398
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGG2_9STRA)

HSP 1 Score: 399 bits (1024), Expect = 7.690e-128
Identity = 191/273 (69.96%), Postives = 221/273 (80.95%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF +R  LTVSGQLNVETHAC+L DVYTFGPTFRAENSHT+RHL+EFWMIEPE+AFA+L DD++LAEDYLKY V YAL  C  DLEFFE  P GE GLR+RL+NVL N F R+TYTE + +++K  +E  V F   P WG DL SEHERY+ EKVY  P ++TDYPK+IKAFYMKLNPDGKTVAA DILVPKIGEIIGGSQRE DL  L +R  E  L   +I WYLDLR+YGT+ HAGFGLGFERL++F TG++NIRDVIPFPR+ G+A F
Sbjct:  152 DFFGKRANLTVSGQLNVETHACALSDVYTFGPTFRAENSHTARHLSEFWMIEPEIAFANLTDDINLAEDYLKYCVEYALAMCSDDLEFFEGTPFGEVGLRDRLRNVLDNPFKRLTYTEAIVVLQKAVEEDGVVFEEKPVWGIDLPSEHERYLCEKVYKMPVVLTDYPKEIKAFYMKLNPDGKTVAAADILVPKIGEIIGGSQREHDLETLKQRCIESGLDPKAIWWYLDLRKYGTVPHAGFGLGFERLILFITGLDNIRDVIPFPRWAGNAEF 424
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BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TB32_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 7.880e-128
Identity = 200/273 (73.26%), Postives = 224/273 (82.05%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF RRT LTVSGQLNVET+AC L DVYTFGPTFRAENSHT+RHLAEFWMIEPE+AFADL+ DM LAEDYLKY V YAL H + DL   E  PGGE GLRERL+NVL+N FVR+TYTE V  + KD    KV F V PEWG DLGSEHERY+ E+VY  P IVT+YPKDIKAFYM+L+ DGKTV+AMDILVPKIGEIIGGSQREE L  L  R +EM L E ++ WYLDLRRYG+ +HAGFGLGFERL++F TG+ENIRDVIPFPR+P HA F
Sbjct:  504 DFFGRRTSLTVSGQLNVETYACGLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLEMDMALAEDYLKYCVWYALRHNEEDLVLLEKVPGGEAGLRERLRNVLENPFVRITYTEAVATLEKDLAAEKVAFQVKPEWGCDLGSEHERYLTEQVYKRPVIVTNYPKDIKAFYMRLDEDGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCREMGLEEAALWWYLDLRRYGSHKHAGFGLGFERLILFITGLENIRDVIPFPRFPAHAEF 776
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERJ5_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 1.050e-126
Identity = 191/273 (69.96%), Postives = 219/273 (80.22%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF +R  LTVSGQLNVETHAC+L DVYTFGPTFRAENSHT RHLAEFWMIEPE+ FADL DD++LAEDYLKY V +AL +C  DLEFFE  P GE GLR+RLKNVL N F R+TYTE + +++K  K+G VKF   P WG DL SE ERY+ EKVY  P  +TDYPK+IK+FYMKLN D KTVAA+DILVPKIGEIIGGSQRE  +  L KR +EM L    + WYLDLRRYGT+ HAGFGLGFERL++F TG++NIRDVIPFPRYP +A F
Sbjct:  243 DFFGKRVNLTVSGQLNVETHACALSDVYTFGPTFRAENSHTGRHLAEFWMIEPEICFADLSDDINLAEDYLKYCVKFALENCAEDLEFFENSPHGEVGLRDRLKNVLDNPFQRLTYTEAIKVLQKAEKDGDVKFEEDPVWGIDLPSEMERYLCEKVYKKPVCLTDYPKEIKSFYMKLNDDEKTVAAVDILVPKIGEIIGGSQREHRMDVLKKRCEEMGLDAKQVWWYLDLRRYGTVPHAGFGLGFERLILFITGLQNIRDVIPFPRYPQNAEF 515
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZAT1_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 1.270e-126
Identity = 191/273 (69.96%), Postives = 219/273 (80.22%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF +R  LTVSGQLNVETHAC+L DVYTFGPTFRAENSHT RHLAEFWMIEPE+ FADL DD++LAEDYLKY V +AL +C  DLEFFE  P GE GLR+RLKNVL N F R+TYTE +++++K  KE  V+F   P WG DL SEHERY+ EKVY  P ++ DYPKDIKAFYMKLN D KTVAA DILVPKIGEIIGGSQRE  +  L +R +EM L    + WYLDLRRYGT+ HAGFGLGFERL++F TG++NIRDVIPFPRYP +A F
Sbjct:  293 DFFGKRVNLTVSGQLNVETHACALSDVYTFGPTFRAENSHTGRHLAEFWMIEPEICFADLADDINLAEDYLKYCVRFALENCAEDLEFFENSPHGEVGLRDRLKNVLDNPFKRLTYTEAIEVLQKAVKEDGVEFEEEPVWGIDLPSEHERYLCEKVYKKPVVLMDYPKDIKAFYMKLNDDEKTVAAADILVPKIGEIIGGSQREHRMDVLKRRCEEMGLDPRQVWWYLDLRRYGTVPHAGFGLGFERLILFVTGLQNIRDVIPFPRYPQNAEF 565
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=4 Tax=Sar TaxID=2698737 RepID=B7FP41_PHATC)

HSP 1 Score: 392 bits (1006), Expect = 4.460e-124
Identity = 187/273 (68.50%), Postives = 219/273 (80.22%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF +R  LTVSGQLNVETHAC+L DVYTFGPTFRAENS TSRHL+EFWMIEPE+AFADL DD++LAEDYLKY V YAL +C  DLEFFE  P GE GLR+RL+NV+ N F R+TYTE +++++    EG  KF   P WG DL SEHER++ EKV+  P ++TDYPKDIKAFYMKLN DGKTVAA D+LVPKIGEIIGGSQRE  +  L +R  EM L   S+ WYLDLRRYGT+ HAGFGLGFERL++F TG+ NIRDVIPFPR+ G++ F
Sbjct:  230 DFFGQRVNLTVSGQLNVETHACALSDVYTFGPTFRAENSFTSRHLSEFWMIEPEIAFADLTDDINLAEDYLKYCVEYALENCADDLEFFENNPYGEMGLRDRLRNVIANPFKRLTYTEAIEILQNAVAEGH-KFEETPVWGMDLPSEHERFICEKVFQQPVVLTDYPKDIKAFYMKLNDDGKTVAAADVLVPKIGEIIGGSQREHRMDVLKQRCLEMNLDPRSVWWYLDLRRYGTVPHAGFGLGFERLILFITGLSNIRDVIPFPRWAGNSKF 501
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KAB3_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 5.840e-123
Identity = 190/273 (69.60%), Postives = 218/273 (79.85%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF RR  LTVSGQLNVETH C+L DVYTFGPTFRAENSHT+RHL EFWMIEPE+AFADL  D+DLAEDYLKY V YAL  C  DLEFFE  P GE GLR+RL+NVL++ FVR+ YT+ +DL++K   EG V+F V PEWG DL SEHERY+ EK+Y  P ++TDYPK IKAFYMKLN D KTVAA D+LVPKIGEIIGGSQRE     L KR  E  L    + WYLDLR+YGT+ HAGFGLGFERL++F TG++NIRDVIPFPR+PG+A F
Sbjct:  431 DFFGRRANLTVSGQLNVETHCCALSDVYTFGPTFRAENSHTTRHLCEFWMIEPELAFADLAKDIDLAEDYLKYCVQYALEVCAEDLEFFEGHPAGEKGLRDRLRNVLESPFVRLPYTDAIDLLKKAVAEG-VEFEVTPEWGIDLPSEHERYICEKIYKQPVVLTDYPKGIKAFYMKLNDDEKTVAAADVLVPKIGEIIGGSQREHRKDVLIKRCIESGLDTKHVWWYLDLRKYGTVPHAGFGLGFERLILFITGLDNIRDVIPFPRWPGNAEF 702
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Match: Asparagine--tRNA (ligase n=1 Tax=Candidatus Puniceispirillum sp. TMED52 TaxID=1986639 RepID=A0A1Z8UZT6_9PROT)

HSP 1 Score: 384 bits (985), Expect = 6.990e-123
Identity = 183/274 (66.79%), Postives = 217/274 (79.20%), Query Frame = 3 
Query:    3 DFFARRTCLTVSGQLNVETHACSLGDVYTFGPTFRAENSHTSRHLAEFWMIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFET-CPGGEPGLRERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHERYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIGGSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLVMFATGIENIRDVIPFPRYPGHASF 821
            DFF RR  LTVSGQLNVETHAC+L DVYTFGPTFRAENSHTSRHLAEFWMIEPE+ FA+L DDM LAEDY+KY  +YA+ HC  DL++FE   P GE GLR RL NV+++DF ++TYT  ++L+++D   G  +F   P WGDDLGSEHERY+ E ++  P IV +YPK IK+FYMKLN D +TVAAMDILVPKIGE++GGSQRE+ L  L +R K + L    + WY D+RRYGT+ HAGFGLGFERLVMF TG+ENIRDVIPFPR PGHA F
Sbjct:   93 DFFGRRCGLTVSGQLNVETHACALTDVYTFGPTFRAENSHTSRHLAEFWMIEPEICFAELIDDMALAEDYIKYCASYAMEHCAEDLKYFEEEYPLGEKGLRARLCNVIESDFAQITYTAAIELLQRDIANGVKQFENYPSWGDDLGSEHERYLCEVIFKKPTIVINYPKGIKSFYMKLNDDNETVAAMDILVPKIGELVGGSQREDRLEVLEERMKLIGLNPADLWWYSDMRRYGTVPHAGFGLGFERLVMFVTGLENIRDVIPFPRVPGHADF 366
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9803.17809.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Asparagine--tRNA1.180e-18699.27ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN1_... [more]
Asparagine--tRNA2.020e-12972.00ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
Asparagine--tRNA2.280e-12870.33ligase n=1 Tax=Pseudo-nitzschia australis TaxID=44... [more]
Asparagine--tRNA7.690e-12869.96ligase n=1 Tax=Attheya septentrionalis TaxID=42027... [more]
Asparagine--tRNA7.880e-12873.26ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=... [more]
Asparagine--tRNA1.050e-12669.96ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 T... [more]
Asparagine--tRNA1.270e-12669.96ligase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=... [more]
Asparagine--tRNA4.460e-12468.50ligase n=4 Tax=Sar TaxID=2698737 RepID=B7FP41_PHAT... [more]
Asparagine--tRNA5.840e-12369.60ligase n=1 Tax=Leptocylindrus aporus TaxID=1398097... [more]
Asparagine--tRNA6.990e-12366.79ligase n=1 Tax=Candidatus Puniceispirillum sp. TME... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9803contigE_fasciculatus_S2_contig9803:107..5069 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score462.6
Seed ortholog evalue1e-127
Seed eggNOG ortholog2880.D7FLN1
Preferred nameGstE2
Model size2510
KEGG rclassRC00004,RC00055,RC00069,RC00523,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K01872,ko:K01893,ko:K03233,ko:K10028
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR03038,R03522,R03648,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00970,ko00980,ko00982,ko00983,ko01524,ko05134,ko05200,ko05204,ko05225,ko05418,map00480,map00970,map00980,map00982,map00983,map01524,map05134,map05200,map05204,map05225,map05418
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0004364,GO:0004812,GO:0004816,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006414,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006575,GO:0006725,GO:0006749,GO:0006790,GO:0006807,GO:0006950,GO:0006979,GO:0007275,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009507,GO:0009536,GO:0009628,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010035,GO:0010038,GO:0010154,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034660,GO:0042221,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046686,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051186,GO:0061458,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons7
EggNOG free text desc.asparagine-tRNA ligase activity
EggNOG OGsCOG0017@1,COG0625@1,KOG0554@2759,KOG0867@2759
EC2.5.1.18,4.1.1.84,6.1.1.22,6.1.1.7
Cds size675
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02000,ko03012,ko03016,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9803.17809.1prot_E_fasciculatus_S2_contig9803.17809.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9803 1793..4920 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842624.1353703-UTR-E_fasciculatus_S2_contig9803:106..17921696842624.1353703-UTR-E_fasciculatus_S2_contig9803:106..1792Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9803 107..1792 -
1696842624.2539406-UTR-E_fasciculatus_S2_contig9803:4920..50691696842624.2539406-UTR-E_fasciculatus_S2_contig9803:4920..5069Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9803 4921..5069 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842624.1526499-CDS-E_fasciculatus_S2_contig9803:1792..19221696842624.1526499-CDS-E_fasciculatus_S2_contig9803:1792..1922Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9803 1793..1922 -
1696842624.1695573-CDS-E_fasciculatus_S2_contig9803:2445..25541696842624.1695573-CDS-E_fasciculatus_S2_contig9803:2445..2554Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9803 2446..2554 -
1696842624.1826122-CDS-E_fasciculatus_S2_contig9803:2761..28791696842624.1826122-CDS-E_fasciculatus_S2_contig9803:2761..2879Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9803 2762..2879 -
1696842624.1936483-CDS-E_fasciculatus_S2_contig9803:3247..33191696842624.1936483-CDS-E_fasciculatus_S2_contig9803:3247..3319Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9803 3248..3319 -
1696842624.213303-CDS-E_fasciculatus_S2_contig9803:3858..40021696842624.213303-CDS-E_fasciculatus_S2_contig9803:3858..4002Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9803 3859..4002 -
1696842624.2251704-CDS-E_fasciculatus_S2_contig9803:4527..46141696842624.2251704-CDS-E_fasciculatus_S2_contig9803:4527..4614Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9803 4528..4614 -
1696842624.2376277-CDS-E_fasciculatus_S2_contig9803:4905..49201696842624.2376277-CDS-E_fasciculatus_S2_contig9803:4905..4920Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9803 4906..4920 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9803.17809.1

>prot_E_fasciculatus_S2_contig9803.17809.1 ID=prot_E_fasciculatus_S2_contig9803.17809.1|Name=mRNA_E_fasciculatus_S2_contig9803.17809.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=225bp
MIEPEVAFADLKDDMDLAEDYLKYLVAYALGHCQGDLEFFETCPGGEPGL
RERLKNVLQNDFVRMTYTELVDLVRKDAKEGKVKFSVIPEWGDDLGSEHE
RYVAEKVYNAPCIVTDYPKDIKAFYMKLNPDGKTVAAMDILVPKIGEIIG
GSQREEDLGKLTKRAKEMKLPEDSISWYLDLRRYGTIQHAGFGLGFERLV
MFATGIENIRDVIPFPRYPGHASF*
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mRNA from alignment at E_fasciculatus_S2_contig9803:107..5069-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9803.17809.1 ID=mRNA_E_fasciculatus_S2_contig9803.17809.1|Name=mRNA_E_fasciculatus_S2_contig9803.17809.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4963bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9803:107..5069- (Ectocarpus fasciculatus EfasUO2)
AGGACTTTTTCGCTCGGCGCACGTGCCTGACGGTGTCGGGACAGCTCAAC
GTGGAAACCCATGCGTGTTCCCTAGGGGACGTTTACACCTTCGGACCGAC
TTTCCGAGCGGAGAACAGCCACACCTCCAGGCACTTGGCGGAGTTCTGGA
TGATCGAGCCCGAGGTACTACTGTACAGCTGTTTGCTCCAGTGTTACGGT
AGATGTAGTGGGTGTGTTGGGTGGGTTGGCCGTCGGTTTGTGACATTCGT
CCGTCCTCTTGGTCGTTTTGTTGCGTGTGACGGCTTTGGTTGCGTGTGTG
TTTGATGAATCCTACCTTGGTAACTCTGTGTGGCCTTTTCAATGGCTTGT
GCTTGTGAACGGATTCATCATGTTTCGGTTCATTCGCTTTGTTCACCGAC
GTTTTTTTATGCTGTATTTCGTCGTTCCTCCTGTTCGTCCTCGTCAACTG
GAAAGGTGGCTTTCGCTGATCTGAAGGACGACATGGATCTGGCGGAGGAT
TACCTCAAGTACCTCGTGGCCTACGCGCTAGGACACTGCCAGGTGCTGTG
GAAGTTTTCCTCACCCCACGGTGAACCTTGACAACACTACATAGGCTTGA
GTTTACTTTCGCTTTCCTTTTACAGTTCCTTGAAAAAGGAAGGCATCTCC
ACACCGAGTAGACTTGATTGTATGCTCTGTGCTCTACTCTTGAGTTCTCT
AAAGTTCCTACGAAGGAAACTCCATGCCGAGTAGACGTGATTTTATTCTT
GCTCGCCCTCAAGTTTCGGTACGGAGGGATCTCGATGCCAAAGTAGATGT
TTGTCGTGGTCGCTTGCCCTGATTTCCCGATTGAGGGATCTCAACGCCAG
AGAAGGCGTGGCGATACGCTCGCTTACCCTAATTTTTCCACGTACAATAC
ACTGTACAATGTAAGGATCTCATCCCCAGAGAATCCGTGATTGTTTCGTT
GTGTGATCCCTTGCCAAAATTCCCCGCGAGGAGGCATCTCAAAAGCCAAA
TAGACTTACGCTTGCTCTAAGAACAGATCACCTCCCCGTTTGTCTGTGTC
ATGTGTGATGTGTGCAGGGGGACCTGGAGTTCTTCGAGACCTGTCCCGGG
GGAGAGCCCGGCCTGAGAGAACGGCTCAAGAACGTTCTGCAGAACGATTT
CGTCAGGATGACGTACACCGAGCTGGTGGACCTCGTAAGAAAGGACGCCA
AGGAGGGCAAGGTCAGTCCCGTACCGCGTACCGTGTATTGTATGGTATGG
GATGCTGCTTTCACGGTTATTTTGATGGGTTGTTCTCGGAGGGAACGATT
TCCGCGAGGTTTTGTTCCATGGTTCGGTTCTTCGGAGGTTGGTTTTGGTG
TGATGAGTGCGTATGAAGAGAGCCCACGAGGAGAACAGGATGAAATAGTT
TAAAGTGAACTGCCAGACTTTTCGATGTTGCCGTCGCAGGTCCACCCTTG
TTTGTGATATATGACGACAGGCAAAATCTCCGCAGCCAGCCTGTTGTGAA
CGAAAAGACAACCAGAATGTTGACCCTCTTTTTCGCTCGCTTGTCGAGGG
GCAGCCCAACGGCGATGATGCATCGTCCCTCTTCTCGAGTGACTTTCTGT
ACTGATACCACGTCTCCCCCCCCCCCCCCCCCATTATTTTTTTTCCCTTT
TGTTTTCGCGATCGGAAGAGGGTGGTGTTGNNNNNNNNNACCACGTCTCC
CCCCCTCCCCCCCTTATCATTTTTCGGCCTGTGTGTCTACGGCCCCCCAG
GTGAAGTTCAGTGTCATCCCCGAGTGGGGAGATGACCTGGGCTCGGAGCA
CGAACGCTACGTGGCGGAAAAGGTACTACGAAGTGTAGTATGGGCTCGCT
ATACAGCAGTAGTGTTATTTTGTTCTTTTTGTTGGTGTTGCCGTTGCGGA
CTTGCGGTTGCAGGTTTGGGGTTGCTTGAGAGGGCTGCTTCGCCTTCGTT
GTTGTCCCGGCATGAACTAGCTATAGCTGGCCCTCACCCAACTCTGCCGT
ACACGTGCATCGATGCCACTGCTACTGCTGAGTTCTGCCGCACACGTACC
TCCTCTGTACTTGAATGCTGCACGGGCCCGTCGAAACAGGCGAATATACT
GTTGTATATGGGCCTTCAATGATTGTCCTAGTGTTATCTTATCTGACCCT
GTGTACAATGGTTGTGTGTTGTGTACGTGTTTGGCGGAAGGTGTACAACG
CACCGTGCATCGTGACCGACTACCCGAAGGACATCAAGGCATTCTACATG
AAGCTCAACCCGGATGGGAAGACTGTGGCTGCCATGGACATCCTCGTGCC
CAAGATCGGTAAGGCCAATGCAGGAATCATTATCGTTATCATTCGATAGA
GGTGCCGAGGTGAAAGCAGCGGCCGGTAGCCTGTACTCTATACTCTATAT
ATTAGCAACGAGTCATTGCTGGGCACAAGCACGCGACAACTTCTCGGTAC
TCACTGCAGACCCCCACCCCCAATCTGCACCGCTAAAAACGCCGTTTGCT
GCTATTTATTTCCAGGTGAGATCATCGGCGGATCACAGCGGGAAGAAGAC
TTGGGGAAGCTGACGAAGCGTGCGAAGGAGATGAAGCTTCCAGAAGACTC
CATCTCGTGGTACCTCGACCTCAGGTATGCTACGAGACGAGCTGCTTTTC
GCCAATAGTGCGCCTGTAAACAAGACGTTGTTCCGACAATTTTTATCTTG
TTGATGCTCTCCTGGACAGTTGCGGTGCTACCTACGGTGCTACAGGAAGA
CCCACTGTTCGGCTAGTAGCAATGTGATTTTTTTATGCGTGTTGGTTACA
GGAAGCAAAGTGCGTGAGCCGCTTCCCGCATGTATATATAAGATCGTGTT
GCTTGGCGCACCAGGCCCAAGGAGATAAGCACAATGCGATTTTTCATCAT
CCGACTTGGCGGACAAAATCAATCCCACCCCGTCCCTTGCAATCGGCTGC
TTTCTTCCATTGGCCCACTAGAGTGAATCAATTTTTGCTGCTTGTCTTCA
TTCATGGGCATTGATAGTGCGTCTCTTTTTTGTTTCTTTGTGGCGACTAG
TTCACCAGGCCGTACGGCACCTCTCTTGCGTTCACGGGCATTGACATGTG
CGTCTCTCTTGCTGTCATTCGTGGCGATAAATCAATTAATTCGCCAGGCG
GTACGGCACCATCCAGCACGCGGGCTTCGGGCTCGGTTTCGAGCGCCTGG
TGATGTTCGCCACGGGCATCGAGAACATCCGTGACGTCATCCCCTTCCCC
CGGTACCCAGGCCACGCCTCCTTCTAATCCTTCGCTGCTGCTGCTTGTTG
TTGTTGGCGGCGGCGTGGCCTGTGAGGTTGCCATTCACGCCTCCTTCTGA
TTCTTAGCGGCCTGTACGGTTGCAATTTTATGCATCGTGCGGGTTATTCC
CTGCTTGTTCGCGGCGGCGTGTGGGATTGCAAAGTCACGCCTCGTTTTCG
CTGCTTGTTGACGGCCTGTGGGGGTTCCTGAGTCAGACCTCATCCTGATT
TTCAGCGGCCTGTAAGGTTGCAAGTTCATGCCTCGTTCTGGTTCTTGGCT
GCTTGTTGGCAGCGGCCTGTGAGGTTACCTTTTGCTGAGGCGATTATCTG
GGGGGGCGGCAGGCAGGTCTACTTGTTCTCTTGGTTGGGGCTGTGACTGC
CGGCGTCGTCTTGTCGAGTTACTCTTTCACTCAAGCTGCGCCGTACCAGT
TTTTCGTTGTACGTCCTCGTTTTTCGGTGTTGTATGAGTAGTAGTTCAGT
CCTGCAGCCAATTCAGAGTCGTCGCCGCGATGCGAGACATCTCCCCAACG
GCCGCCTTTTTGTGACCGTGTTGGCAACCGGGAGCTTGGAGGGAAACGTC
TATCGCTGTTCTCGAACGATGAGTGCGCTGAATAAACATGAGTTACCGGG
TCCGTCAGGACGTCGGTTTTTCGTGGTTCCAGACTCACTCCTGGTGGCCG
AGAATGCGAGAGATGCTGTCGCCACTGATTGCGAGAGATAGAGATGTCAT
TGTTTACGAGGGTGTCTTACCTTCCAGGCTTGGCGTCTCGCGGGTGCAGA
GGTGACGGGATTTTTGTTTTTTTCGTTGGGCGTCGGTACATTCTTAACAT
TGACATTGACGTTGTTTTATCGTAGTCCAGACAGACTCACTCCTTTGGTG
GCCGAAATTGCGAGAGATAGTGTCGTCACTGTTTACGAGGGTGTCTGACG
TTCCAGGCTTAGATTCTCGCGGTGCGCAGAGGTGGCGGGGTTTTTGTTTT
TTGTGTTGGGGGGGCGTTGGAAGATCCCGACCGACGATCCTTACCCTGGG
AATGAAACGGCCTGTTTTTCAATTTTGTCGTCGCTTATTGTCTGCCCACT
GTGTTTTACGTGTTTCCTGGAGATTTACAAACATAAAGGTATTCGGTGAA
CGTGAATGAACGTCTGGCGTGTATTGTATGAATGTCTGTGTTGCCGTTGC
CCTCTTCGTTTTATGGCACCCATCATGGGGCGTGTTTCTTGCTTTAGAGG
CACTCTGATGGACAATGTTTGGGACGGAGCAATGCGCTTTTCTTCTGACA
CAAGTTCACTGCTGCTAAACATCAATCGTTGCCGTAGGATGAATATTAAA
TACTTTCCCTACCCGGCCCGTGACTTTTACCAACACGAGTCGCTCGCTTC
GCTCCGGGAACCTCGTGCAGAATCACACTCTGCTCAGTACGGCATTACTA
TGATGTACCTGGTAGGCGGTGTGTTGTAAGGTACGAAGAAAGTTTTGTTT
CTCCACCGCGGGAAACAGCATACAGCGTAAGGATAAGGATGGCACAGAAA
CACCCTACTGTACCGCTTTTGTGCTCCCCCTTTACCTCGAAAACTCCCGC
GGTTGGGGTGAGGCATGAGGCATATCTCCCGTATTGCGGATTTTGGGCAC
AAATGCTTGTGTAGCGCGGCCGCATGTTCCAGGAGCACGACCAGACCGGT
ATGGCACAGAGTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9803:107..5069-

>mRNA_E_fasciculatus_S2_contig9803.17809.1 ID=mRNA_E_fasciculatus_S2_contig9803.17809.1|Name=mRNA_E_fasciculatus_S2_contig9803.17809.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=675bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9803:107..5069- (Ectocarpus fasciculatus EfasUO2)
ATGATCGAGCCCGAGGTGGCTTTCGCTGATCTGAAGGACGACATGGATCT
GGCGGAGGATTACCTCAAGTACCTCGTGGCCTACGCGCTAGGACACTGCC
AGGGGGACCTGGAGTTCTTCGAGACCTGTCCCGGGGGAGAGCCCGGCCTG
AGAGAACGGCTCAAGAACGTTCTGCAGAACGATTTCGTCAGGATGACGTA
CACCGAGCTGGTGGACCTCGTAAGAAAGGACGCCAAGGAGGGCAAGGTGA
AGTTCAGTGTCATCCCCGAGTGGGGAGATGACCTGGGCTCGGAGCACGAA
CGCTACGTGGCGGAAAAGGTGTACAACGCACCGTGCATCGTGACCGACTA
CCCGAAGGACATCAAGGCATTCTACATGAAGCTCAACCCGGATGGGAAGA
CTGTGGCTGCCATGGACATCCTCGTGCCCAAGATCGGTGAGATCATCGGC
GGATCACAGCGGGAAGAAGACTTGGGGAAGCTGACGAAGCGTGCGAAGGA
GATGAAGCTTCCAGAAGACTCCATCTCGTGGTACCTCGACCTCAGGCGGT
ACGGCACCATCCAGCACGCGGGCTTCGGGCTCGGTTTCGAGCGCCTGGTG
ATGTTCGCCACGGGCATCGAGAACATCCGTGACGTCATCCCCTTCCCCCG
GTACCCAGGCCACGCCTCCTTCTAA
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