mRNA_E_fasciculatus_S2_contig9798.17796.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9798.17796.1
Unique NamemRNA_E_fasciculatus_S2_contig9798.17796.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 1.830e-122
Identity = 194/289 (67.13%), Postives = 226/289 (78.20%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQNLKAAITEHLETKRKEWERAQKQIERDRSSQAQPVSTRDDFVSRSSMARSESHPPSLRLCGFAAVSGRSMDDITNLGKTIWEVANDTTMFPDVRQVVPNVWRRVWAVMDALHVGADPDSAVRLEGVPLPIEGRAKQEFVTEENGFEAWRTADRESAAQMGDSEGDSEQLSVALSKQFKAALKLRQREGSILVACGLIHLNPSWINGLLRELLDHRLADPQE 867
            Q+FLT+GALHLLVV+LHKFD D+LSRG  VYIWLDSLLCRVP SAVLVV TH DAFGDDH RSA AL+ LKAA+TEHLETKR++W  A++  ER+  SQA+P ST  DF+S S   RS+  PPSL LCGF +VSGRS+D ++ +G+ IWEVAN+  +FP VR++VP +WRRVWAVMDALHVGADPDSAVRLEG  + IEGR K EFVTEE  FE W  ADRESA Q+  +    EQL +  S+ FKAAL LR   GS+L  CGLIHLNPSWIN LLRE+LDHRL DP E
Sbjct:  256 QMFLTDGALHLLVVDLHKFDRDVLSRGGGVYIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLEERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPAVFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQLRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNE 544          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I0_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 1.300e-101
Identity = 168/293 (57.34%), Postives = 209/293 (71.33%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQNLKAAITEHLETKRKEWERAQKQIERDRSSQAQPVSTRDDFVSRSSMARSESH----PPSLRLCGFAAVSGRSMDDITNLGKTIWEVANDTTMFPDVRQVVPNVWRRVWAVMDALHVGADPDSAVRLEGVPLPIEGRAKQEFVTEENGFEAWRTADRESAAQMGDSEGDSEQLSVALSKQFKAALKLRQREGSILVACGLIHLNPSWINGLLRELLDHRLADPQE 867
            QLFLT G+LH+LVV+LHKF  D  S GD VY+WLDSLLCRVP S VLVV T+ DAFGD+H RSAAAL  L+AAI EHLE KR EW+ AQ+Q E  + +   P        S S+      H    PP+L+LCGF + SGRS++D++ LG+ IWE+A++ ++FPD+ Q +P  WRRVWAVMDAL  GADP  AVRL+G   P+EGR K+EFVT E  FEAW  AD ES A++     DS+ L+    + F+AALKLRQ  GS+L ACGL+HLN +WIN LLRELLDHRLADP++
Sbjct:  146 QLFLTSGSLHVLVVDLHKFVCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATYADAFGDNHERSAAALSKLEAAIHEHLEEKRMEWQTAQRQAENTKQT---PQDRCGPPASGSTTGYPADHAAAPPPTLQLCGFISGSGRSLEDLSVLGRKIWEIAHEESLFPDIHQKIPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREEAFEAWWGADGESVAELKAKGPDSQHLNQDSQRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQ 435          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: LRR-GTPase (of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 2.020e-100
Identity = 169/293 (57.68%), Postives = 209/293 (71.33%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQNLKAAITEHLETKRKEWERAQKQIERDRSSQAQPVSTRDDFVSRSSMARSESH----PPSLRLCGFAAVSGRSMDDITNLGKTIWEVANDTTMFPDVRQVVPNVWRRVWAVMDALHVGADPDSAVRLEGVPLPIEGRAKQEFVTEENGFEAWRTADRESAAQMGDSEGDSEQLSVALSKQFKAALKLRQREGSILVACGLIHLNPSWINGLLRELLDHRLADPQE 867
            QLFLT G+LH+LVV+LHKF  D  S GD VY+WLDSLLCRVP S VLVV TH DAFGD+  RSAAAL  L+AAI +HL+ KR+EW+ AQ+Q E+ + +   P        S S+      H    PP+L+LCGF   SGRS++D++ LG+ IWE+AN+ ++FPD+ Q VP  WRRVWAVMDAL  GADP  AVRL+G   P+EGR K+EFVT E  FEAW   D ES A++     DS+QL    S+ F+AALKLRQ  GS+L ACGL+HLN +WIN LLRELLDHRLADP++
Sbjct:  251 QLFLTSGSLHVLVVDLHKFVCDPSSTGDTVYVWLDSLLCRVPGSVVLVVATHADAFGDNRERSAAALSKLEAAINDHLKEKREEWQTAQRQAEKAKQT---PQDRCGPLASGSTTGYPADHAAAPPPTLQLCGFILGSGRSLEDLSVLGRKIWEIANEASLFPDIHQTVPKSWRRVWAVMDALREGADPQKAVRLDGPLAPVEGREKREFVTREAAFEAWWGVDGESVAELKAKGPDSQQLKQDSSRLFQAALKLRQMGGSVLAACGLVHLNVAWINELLRELLDHRLADPKQ 540          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNE2_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 3.410e-22
Identity = 80/206 (38.83%), Postives = 102/206 (49.51%), Query Frame = 1
Query:  103 DSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQNLKAAITEHLETKRKEWERAQKQIE---RDRSSQAQPVS---------------------TRDDFVSR------------SSMARSESHPPSLRLCGFAAVSGRSMDDITNLGKTIWEV----ANDTTMFPDVRQVVPNVWRRVWAVMDALHVGADPDSAVRLEGVPLPIEG 600
            DSLLCRVP SAVLVV T  + F D+  R A+ L++L+       E  R+ W   ++ +    R  +S A P S                     T +   +R            SS  R  S PPSL LC F ++ GRS D + +L K I++V      D   FP +RQ VPN WRRVWAVM ALHVG     AVRLEG  +P+EG
Sbjct:   11 DSLLCRVPGSAVLVVATRANPFADNSKR-ASTLESLE-------EQSRRTWSEKRRYVSSLLRTVASVALPGSRFLKHCSSCISTILLCSQQWLTAETIKNRQRAFQGGGSNANSSSERPPSPPPSLWLCRFISICGRSSDGLASLKKKIYDVIMEPGTDNFAFPHLRQHVPNSWRRVWAVMSALHVGVGLKQAVRLEGPIVPLEG 208          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.920e-12
Identity = 89/324 (27.47%), Postives = 132/324 (40.74%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGD-------AVYIWLDSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQNLKAA-------------ITEHLETKRKEWERAQ--KQIERDRSSQAQPVSTRDD--FVSRSSMARSESHPPSLRLCGFAAVSGRSMDDITNLGKTIWEVANDTTM-----FPDVRQVVPNVWRRVWAVMDALHVGADPDSAVRLEGVPLPIEGRAKQEFVTEENGFEAWRTADRESAAQMGDSEGDSEQLSVALSKQFKAALKLRQREGSIL---------VACGLIHLNPSWINGLLRELLDHRLAD 858
            QLFLT+GAL LLVV+LH F  ++ S  D        +Y WL+ L  RVP +AV +VG+HVD    +  R A    +   A             +++ ++ K     R Q  + I+ + +   +    RDD     RS  +R  + P  L L G       +   +  L + I + A+         FP V Q V   W   +  MD L   A           P  +  RA +EF  + +G                   GD+        K    A++ R+ EG +L         VA  ++HL+PSW+  L+R L DH L D
Sbjct:  349 QLFLTKGALFLLVVDLHAFSKEIGSGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVDQMESEDARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRDDGRMAPRSGSSRFTAEP--LVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVLKGTA-----------PCVLWSRAVEEFRRKMSGIPPVA--------------GDA-------GKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVD 638          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: Roc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.790e-11
Identity = 88/319 (27.59%), Postives = 132/319 (41.38%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQN-----LKAAITEHLETKRKEWERAQKQIERDRSSQAQPVSTRDDFVSRSSMARSESHPPSLRLCGFAAVSGRSMDDITNLGKTIWEVANDTTMFPDVRQVVPNVWRRVWAVMDALHVGA-------DPDSAVR-LEGVPLPIEGRAKQEFVTEENGFEAWRTADRESAAQMGDSEGDSEQLSVALSKQFKAALKLRQREGSILVACG-----------------LIHLNPSWINGLLRELLDHRLADPQE 867
            Q+FLT GAL +LVV++  +  D  SR DA+  WLD L  RVP S VL+VGTH D F      S   + +      K+A     +      +R    ++  R  Q   +   D+ ++             L L     V+   + +  +     + V +D   FP V   VP       A ++A+  GA       DP   VR L+G  L  EG   Q F+        +     E +   G +  + EQ        F AA+ L +R+G+ILV                    +IH+NP+W   L+R ++D RL DP +
Sbjct:  298 QMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPADCSKRDIMDRVGRECKSARERARQESAGNSDREYAGVQDSRRYQPLRIVVVDELLA-------------LNLTPSGGVTTAQLQE--HFEGVAYGV-HDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLD-EG---QPFILFPEALSLFLEVAGEKSL-FGGNATEGEQA-------FLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQ 588          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: malignant (fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y5Y3_BRABE)

HSP 1 Score: 71.6 bits (174), Expect = 3.090e-10
Identity = 80/293 (27.30%), Postives = 128/293 (43.69%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQNLKAAITEHLETKRKEWERA-QKQIERDRSSQAQPVSTRDDFVSRSSMARSESHPPSLRLCGFAAVSGRSMDD-ITNLGKTIWEVANDTTMFPDVRQVVPNVWRRVWAVMDALH-VGADPDSAVRLEGVPLPIEGRAKQEFVTEENGFEAWRTADRESAAQMGDSEGDSEQLSVALSKQFKAALKLRQREGSILVACG------LIHLNPSWINGLLRELLDHRL 852
            QLFLT+GAL+LL VNL ++         AV  WLD+L  RVP + V +VG+ +D        S+  ++     I E    +   W+R  Q+QI++ + S A   + R +   +    R     P LRL G   VS       + +L   I +  N+T +FP +R+++P  W     ++  L   G +   +          E  +  E  T  +    W T  RE   Q G       QL+   + + ++ L   Q+ G+IL          LI  +PS +  +++EL  H L
Sbjct:  518 QLFLTQGALNLLTVNLQEYRCSEECYTQAVGFWLDTLNARVPGAVVTIVGSKMDLC------SSTEIEKKTKDIQERFTQQHAFWQRTIQQQIDKLQGS-ANGGTDRGEIAQQIERTRQLLTRP-LRLTGVHCVSSAEPSSGLDSLVAHIMDTTNNTDLFPTLRRILPKTWVEFERLLRNLRDKGTEEHQSA---------ESTSYGETQTTHSNDLKWLT--REECLQQG-------QLAGLTADRLESVLSYLQQVGTILRYTDIPELKDLIFHDPSGLIDVMKELFHHDL 784          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: malignant (fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001600C1D9)

HSP 1 Score: 70.5 bits (171), Expect = 5.170e-10
Identity = 55/188 (29.26%), Postives = 92/188 (48.94%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVGTHVDAF--GDDHGRSAAALQNLKAAITEHLETKRKEWERAQKQIERDRSSQAQPVSTRDD--FVSRSSMARS---------------ESHPPSLRLCGFAAVSGRSMDDITNLGKTIWEVANDTTMFPDVRQVVPNVW 507
            Q FL+EG+LHLLVVNL  +     +   AV  WL+S+  RV  + V +VGTH D    G+  G++    +++K  + +++E +RK      +++E       Q V  RD+  +V R+  +R                +S    L+    A VS + M  IT+L   +++++ D  +FP    V+P  W
Sbjct:  156 QFFLSEGSLHLLVVNLKTYRRRQTAFNRAVRFWLESVDSRVVNAVVYLVGTHADRLTAGEIEGKT----RDIKDRVMKYIEERRKHLHSQIEEVE------TQLVKARDEAEYVMRAYASRKLERLQRKVEKLRCELDSGLKFLKNGDVAVVSSKDMTGITDLKTDVFKISVDKDLFPSAHCVLPRSW 333          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: Roc (domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZI89_BRAFL)

HSP 1 Score: 67.0 bits (162), Expect = 9.480e-9
Identity = 54/176 (30.68%), Postives = 90/176 (51.14%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQNLKAAITEHLETKRKEWERAQK-QIER-----DRSSQAQPVSTRDDFVSRSSMARSESHPPSLRLCGFAAVSG-RSMDDITNLGKTIWEVANDTTMFPDVRQVVPNVW 507
            Q FLT+GAL+LL V+L  ++       +AV  WLD+L  RVP + V +VG+ +D        S+A ++     I +  E ++  W+R+ +  I++     DRS  A  V  + +   +    +S    P LRL G   VS       + +L   + E AN+T++FP +R+++P  W
Sbjct:  400 QFFLTQGALNLLTVDLQTYNCTEQRYTEAVGFWLDTLNTRVPGAVVTIVGSKMDEC------SSAEIEEKTRDIRKRYEKQQLSWKRSMEWHIQKLGNDIDRSD-APKVGGQKELKKQLEHTQSLLERP-LRLVGMYCVSSVEPTSRLDSLRSHLLESANNTSLFPILRRILPGTW 567          
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Match: uncharacterized (protein LOC118430883 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FFECD0)

HSP 1 Score: 67.0 bits (162), Expect = 1.090e-8
Identity = 54/176 (30.68%), Postives = 90/176 (51.14%), Query Frame = 1
Query:    1 QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVGTHVDAFGDDHGRSAAALQNLKAAITEHLETKRKEWERAQK-QIER-----DRSSQAQPVSTRDDFVSRSSMARSESHPPSLRLCGFAAVSG-RSMDDITNLGKTIWEVANDTTMFPDVRQVVPNVW 507
            Q FLT+GAL+LL V+L  ++       +AV  WLD+L  RVP + V +VG+ +D        S+A ++     I +  E ++  W+R+ +  I++     DRS  A  V  + +   +    +S    P LRL G   VS       + +L   + E AN+T++FP +R+++P  W
Sbjct:  706 QFFLTQGALNLLTVDLQTYNCTEQRYTEAVGFWLDTLNTRVPGAVVTIVGSKMDEC------SSAEIEEKTRDIRKRYEKQQLSWKRSMEWHIQKLGNDIDRSD-APKVGGQKELKKQLEHTQSLLERP-LRLVGMYCVSSVEPTSRLDSLRSHLLESANNTSLFPILRRILPGTW 873          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9798.17796.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
LRR-GTPase1.830e-12267.13of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Roc1.300e-10157.34domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
LRR-GTPase2.020e-10057.68of the ROCO family, incomplete sequence n=1 Tax=Ec... [more]
Uncharacterized3.410e-2238.83protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
LRR-GTPase1.920e-1227.47of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Roc2.790e-1127.59domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
malignant3.090e-1027.30fibrous histiocytoma-amplified sequence 1 homolog ... [more]
malignant5.170e-1029.26fibrous histiocytoma-amplified sequence 1 homolog ... [more]
Roc9.480e-930.68domain-containing protein (Fragment) n=1 Tax=Branc... [more]
uncharacterized1.090e-830.68protein LOC118430883 n=1 Tax=Branchiostoma florida... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9798contigE_fasciculatus_S2_contig9798:1175..2767 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score385.6
Seed ortholog evalue2.1e-104
Seed eggNOG ortholog2880.D8LLG1
Model size868
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
Cds size867
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842622.6824164-CDS-E_fasciculatus_S2_contig9798:1174..14231696842622.6824164-CDS-E_fasciculatus_S2_contig9798:1174..1423Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9798 1175..1423 +
1696842622.6976068-CDS-E_fasciculatus_S2_contig9798:1620..21091696842622.6976068-CDS-E_fasciculatus_S2_contig9798:1620..2109Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9798 1621..2109 +
1696842622.709833-CDS-E_fasciculatus_S2_contig9798:2637..27661696842622.709833-CDS-E_fasciculatus_S2_contig9798:2637..2766Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9798 2638..2766 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9798.17796.1prot_E_fasciculatus_S2_contig9798.17796.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9798 1175..2766 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9798.17796.1

>prot_E_fasciculatus_S2_contig9798.17796.1 ID=prot_E_fasciculatus_S2_contig9798.17796.1|Name=mRNA_E_fasciculatus_S2_contig9798.17796.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=289bp
QLFLTEGALHLLVVNLHKFDGDLLSRGDAVYIWLDSLLCRVPASAVLVVG
THVDAFGDDHGRSAAALQNLKAAITEHLETKRKEWERAQKQIERDRSSQA
QPVSTRDDFVSRSSMARSESHPPSLRLCGFAAVSGRSMDDITNLGKTIWE
VANDTTMFPDVRQVVPNVWRRVWAVMDALHVGADPDSAVRLEGVPLPIEG
RAKQEFVTEENGFEAWRTADRESAAQMGDSEGDSEQLSVALSKQFKAALK
LRQREGSILVACGLIHLNPSWINGLLRELLDHRLADPQE
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mRNA from alignment at E_fasciculatus_S2_contig9798:1175..2767+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9798.17796.1 ID=mRNA_E_fasciculatus_S2_contig9798.17796.1|Name=mRNA_E_fasciculatus_S2_contig9798.17796.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1593bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9798:1175..2767+ (Ectocarpus fasciculatus EfasUO2)
CAGCTGTTTCTGACCGAGGGGGCGCTGCATCTTCTTGTGGTGAACCTCCA CAAGTTCGACGGAGACCTTCTCTCGAGAGGGGATGCGGTCTACATTTGGC TGGACTCCTTGCTCTGCCGGGTCCCTGCGAGCGCGGTCCTCGTCGTAGGA ACACACGTGGACGCCTTCGGTGACGACCACGGGCGATCGGCGGCAGCACT CCAAAACCTCAAGGCAGCGATCACGGAGCACCTGGAGACAAAACGCAAGG TATGTGATGTCATTTAATTTTGCCGCCGCAGACACTGTCGCGGTGGGCAT AACAGAGCGATGGTACCTTGTAATCATTTGCGCTTCGACGGCGGCTACGA ATATATTTCAGGAGTTGTTCTGAACGCATGGACATTAGTTCCGCTCACTC CCCGACTTTGCAATGTACGCGCGTCCCCTATCGGTATTTGTTCTAGGAGT GGGAGCGTGCACAGAAACAAATCGAGCGCGACAGAAGTTCACAAGCCCAG CCTGTCTCCACCAGAGATGATTTTGTGTCGAGATCTTCGATGGCTCGTTC CGAGTCACACCCGCCCTCTCTCCGGCTTTGCGGCTTCGCCGCAGTCTCCG GCCGTAGCATGGACGACATCACGAATCTCGGGAAAACCATCTGGGAGGTT GCCAACGATACCACTATGTTCCCGGACGTTCGCCAAGTGGTTCCCAACGT GTGGAGGAGGGTGTGGGCCGTCATGGACGCCTTGCACGTGGGTGCGGACC CTGATTCGGCGGTACGACTGGAGGGCGTTCCCCTCCCGATCGAAGGGCGC GCCAAGCAAGAGTTTGTGACCGAGGAAAACGGCTTCGAGGCGTGGCGGAC CGCAGACCGCGAGTCGGCGGCACAGATGGGCGATTCTGAGGGAGATAGCG AGCAGCTCTCCGTCGCCCTCTCCAAGCAGTTCAAGGTATGATAGTTGGTG TGGCATTGAAAAACCAACTTACACATGACGCGAACTCTGGTACCTGAGAT GGATGTACCAGCTTCGCGCCGACCAAAGCAACGACGGCGCGGACACTTGA ATTTGTATTGAGACGATCAGTTGATTCGTGTCTTGTAACTCTCTGCATTT CAATGGCAATTTGCGTGCTGGCTTCTCATCGCGTGGCATTGATGCTCAGT CCCGCCTGCACCTGCGGTGTGTACTTCGATGCACGCAGATTTGTTTATCT GTGATTCACCTTGTACAATTGGCCGTGTTGCTGTGCCTGTATTGCGCTTT GAGACCTCGTATATTGCTGTGGCGTGTTTATCTCCTACGAAAAGCGGGAA GGCTACCAAAGTATCGAGACACAGACGATCGGACTATTTAGTAGAGGCGA GTTTTCGCCAGTTTCTGCCCAACTTGCAACGCCTCCTAAAATTTTATCTC ACGTGCGAGATCCTCATTGTACGCGTTTCACAATCCGTGGTGTTCCCTTT TACGATTCCCTAGGCGGCGCTAAAGCTTCGGCAGAGGGAAGGGTCTATTT TGGTGGCTTGCGGTCTTATTCACCTCAACCCTTCGTGGATCAATGGCCTG CTGCGAGAACTGTTGGATCACCGCTTGGCGGACCCTCAGGAGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9798:1175..2767+

>mRNA_E_fasciculatus_S2_contig9798.17796.1 ID=mRNA_E_fasciculatus_S2_contig9798.17796.1|Name=mRNA_E_fasciculatus_S2_contig9798.17796.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=867bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9798:1175..2767+ (Ectocarpus fasciculatus EfasUO2)
CAGCTGTTTCTGACCGAGGGGGCGCTGCATCTTCTTGTGGTGAACCTCCA
CAAGTTCGACGGAGACCTTCTCTCGAGAGGGGATGCGGTCTACATTTGGC
TGGACTCCTTGCTCTGCCGGGTCCCTGCGAGCGCGGTCCTCGTCGTAGGA
ACACACGTGGACGCCTTCGGTGACGACCACGGGCGATCGGCGGCAGCACT
CCAAAACCTCAAGGCAGCGATCACGGAGCACCTGGAGACAAAACGCAAGG
AGTGGGAGCGTGCACAGAAACAAATCGAGCGCGACAGAAGTTCACAAGCC
CAGCCTGTCTCCACCAGAGATGATTTTGTGTCGAGATCTTCGATGGCTCG
TTCCGAGTCACACCCGCCCTCTCTCCGGCTTTGCGGCTTCGCCGCAGTCT
CCGGCCGTAGCATGGACGACATCACGAATCTCGGGAAAACCATCTGGGAG
GTTGCCAACGATACCACTATGTTCCCGGACGTTCGCCAAGTGGTTCCCAA
CGTGTGGAGGAGGGTGTGGGCCGTCATGGACGCCTTGCACGTGGGTGCGG
ACCCTGATTCGGCGGTACGACTGGAGGGCGTTCCCCTCCCGATCGAAGGG
CGCGCCAAGCAAGAGTTTGTGACCGAGGAAAACGGCTTCGAGGCGTGGCG
GACCGCAGACCGCGAGTCGGCGGCACAGATGGGCGATTCTGAGGGAGATA
GCGAGCAGCTCTCCGTCGCCCTCTCCAAGCAGTTCAAGGCGGCGCTAAAG
CTTCGGCAGAGGGAAGGGTCTATTTTGGTGGCTTGCGGTCTTATTCACCT
CAACCCTTCGTGGATCAATGGCCTGCTGCGAGAACTGTTGGATCACCGCT
TGGCGGACCCTCAGGAG
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