mRNA_E_fasciculatus_S2_contig9783.17785.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN83_ECTSI) HSP 1 Score: 486 bits (1251), Expect = 3.660e-162 Identity = 239/247 (96.76%), Postives = 241/247 (97.57%), Query Frame = 1
Query: 1 SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ 741
SGS PASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPAS EEERF+DNDANIVNVSLSPLGP PGDEPKKRALTKTKVTEYTNKACNEFKQKCQ TLLARLKEF+PDLLIISAGFDGHVEDYYHYLSNE YEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ
Sbjct: 577 SGSAPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEEERFNDNDANIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ 823
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ7_9PHAE) HSP 1 Score: 481 bits (1238), Expect = 7.790e-161 Identity = 236/247 (95.55%), Postives = 240/247 (97.17%), Query Frame = 1
Query: 1 SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ 741
SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPM TRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPAS E+ERF+DND NIVNVSLSPLGP PGDEPKKRALTKTKVTEYTNKACNEFKQKCQ TLLARLKEF+PDLLIISAGFDGHVEDYYHYLSNE YEWVTLALADCCPTGRVVSVLEGGYSLEAR+SRAKAAQQ
Sbjct: 517 SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMNTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEDERFNDNDDNIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARMSRAKAAQQ 763
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVT0_9STRA) HSP 1 Score: 241 bits (616), Expect = 1.420e-70 Identity = 135/240 (56.25%), Postives = 160/240 (66.67%), Query Frame = 1
Query: 4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRS--GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWL-DDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPP---PGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCP--TGRVVSVLEGGY 699
G+VP+ FWK P M SSGFCLLNN AIGAAYAR YGR+ G +RVAIVD DIHHGNGTE+IVR L+P LPLP SW P ++KPWL ++ DA +VFFGS++L D FYP S E + D NIVNV L PL PP PG K + L KV EY +A EF++K LL +LK F PDLL ISAGFDGHVED+YHYL+ E Y W+T L +G+V+SVLEGGY
Sbjct: 585 GAVPSHCFWKAPSMTSSGFCLLNNVAIGAAYARQAYGRAPHGPFARVAIVDFDIHHGNGTEDIVRALQPSRRLLPLPASWAPEHYQIFKPWLSEEEDAASVFFGSINLVDGSHFYPCSGREMDN-DQAAPNIVNVELRPLRPPQAAPGTG-KAKMLGPRKVKEYCQRASGEFREKVSSMLLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGY 822
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Histone (deacetylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8J0_9STRA) HSP 1 Score: 226 bits (576), Expect = 4.990e-70 Identity = 129/227 (56.83%), Postives = 152/227 (66.96%), Query Frame = 1
Query: 43 MNSSGFCLLNNAAIGAAYARCRYGRS--GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWL-DDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPP---PGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCP--TGRVVSVLEGGY 699
M SSGFCLLNN AIGAAYAR YGR+ G +RVAIVD DIHHGNGTE+IVR L+P LPLP SW P ++KPWL ++ DA +VFFGS++L D FYP S E + D NIVNV L PL PP PG K + L KV EY +A EF++K TLL +LK F PDLL ISAGFDGHVED+YHYL+ E Y W+T L +G+V+SVLEGGY
Sbjct: 1 MTSSGFCLLNNVAIGAAYARQAYGRAPHGPFARVAIVDFDIHHGNGTEDIVRALQPSRRLLPLPASWAPEHYQLFKPWLSEEEDAASVFFGSINLVDGPHFYPCSGREMDN-DQAAPNIVNVELRPLRPPQAAPGTG-KAKMLGPRKVKEYCQRASVEFREKVSSTLLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGY 225
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Histone (deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER0_9STRA) HSP 1 Score: 218 bits (555), Expect = 8.510e-63 Identity = 134/305 (43.93%), Postives = 162/305 (53.11%), Query Frame = 1
Query: 1 SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELS-----RVAIVDIDIHHGNGTEEI----------------VRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDAN------IVNVSLSPLGP-PPGDEPKKRALTKTKVTEY---TNKACN----------------------------------EFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCPTG--RVVSVLEGGYSLEAR 714
SGSVP +FW+NP MNSSGFCL+NN A+GAAYA RYGR G+ + RVAIVD DIH GNGTE+I VR LRP RLPLPPSWPP YKPWLD+ DA+NV F S++L FYPAS D D + I+N +L+P+G PGD P + L + T TN A + + C+ LL RL F PD+L +SAGFDGH ED YH+ +N+ Y W+T L +C G RVVSVLEGGYSL R
Sbjct: 368 SGSVPGPNFWRNPDMNSSGFCLVNNVAVGAAYAMARYGRGGQGASGGRFRVAIVDFDIHQGNGTEDIHXXXXXXXXXXXXXXIVRSLRPRRRRLPLPPSWPPAFAATYKPWLDEDDAENVMFASINLVQGHDFYPASGHASAGGGDGDGDELHGGHIINAALAPVGGVAPGDLPPRARLAQVHNTSQQPQTNSAXXXXXXXXXXXXXXXXXXXXXXXPARAAKLRALASLQLRASCEEALLPRLAAFAPDVLFVSAGFDGHHEDMYHWNTNDDYAWLTRRLMECAAAGGGRVVSVLEGGYSLAPR 672
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D3_9STRA) HSP 1 Score: 208 bits (530), Expect = 1.340e-60 Identity = 110/234 (47.01%), Postives = 145/234 (61.97%), Query Frame = 1
Query: 25 FWKNPGMNSSGFCLLNNAAIGAAYARCRYGR-------SGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQD-KDLFYPASEEEEERFDDNDANIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCPTGRVVSVLEGGYS 702
FW++P M S GFCLLN AA+ AYAR RYGR S L ++AI+D D+HHGNGTEEIV+ L+P + PLP SWP + V+KPWLD+ D D VFFGSV L D K FYP +E D IVNV L+ +GP PGD +++LT ++ + ++A ++ LL L+ F+ DL+I SAGFDG+ D YH+ YEW+T A+ D P +S+LEGGYS
Sbjct: 254 FWRSPDMCSCGFCLLNTAAVAGAYARYRYGRPRAVPEQSKVLRKIAIIDFDVHHGNGTEEIVKGLKPHKVQKPLPDSWPAEYREVHKPWLDESDGDEVFFGSVHLWDAKGAFYPGGGGPQESSD----TIVNVPLAAVGPKPGDVRARQSLTASQRAKLCDEAGANLRRDVSAQLLPALQRFDADLVIFSAGFDGYEADLYHWFRESDYEWLTHAVLDASPRASCISILEGGYS 483
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R736_SAPDV) HSP 1 Score: 208 bits (529), Expect = 2.980e-60 Identity = 124/249 (49.80%), Postives = 153/249 (61.45%), Query Frame = 1
Query: 4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRS---------GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDL-FYPASEEEEERFDDNDA--NIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVT---LALADCCPTGRVVSVLEGGYSL 705
G V +F K+PG S GFCLLNN AIGAAYA YG S + RVAI+D DIHHGNGTEEIVR LR R PLPPSW P T Y PW DD DADNVFF S+ + D+ FYP S ++ + IVN+ L+ LG KR +T++ E+ +A +EF+ K LL L+ F PDL++IS+GFDGHV+DYYH L+ YEW+T + +AD C GR+VSVLEGGYSL
Sbjct: 273 GCVENDAFHKSPGGCSCGFCLLNNVAIGAAYAMTTYGPSHYSKASISHATVRRVAIIDFDIHHGNGTEEIVRNLRLHDHRYPLPPSWAPKTFPSYMPWRDDDDADNVFFASMHVYDETTAFYPGSGRGPHGRNELASCNTIVNIPLTNLG-----ASGKRGTERTRL-EHMERASSEFQSKATEVLLPALRAFAPDLILISSGFDGHVDDYYHGLTEWDYEWITQRLVEIADNCCDGRIVSVLEGGYSL 515
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K1_PYTOL) HSP 1 Score: 204 bits (518), Expect = 1.160e-57 Identity = 116/264 (43.94%), Postives = 154/264 (58.33%), Query Frame = 1
Query: 4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRY------------------GRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFD---DNDANIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLAL---ADCCPTGRVVSVLEGGYSLEARVSR 723
G V + F + P M + GFCLLNN AIGA YA Y G E++R+AIVD DIHHGNGTEEI+R L P + PLP SW P++ YKPW D+ D DNVFF S+ L D+D FYP S + + NI+N+ LS LGP +E +K + K ++A +F++K L+ L+ F PDL+++SAGFDGH +D+Y+YL+ + Y WVT L AD C GR+VSVLEGGY++E R
Sbjct: 395 GCVESEGFHRRPEMCTCGFCLLNNVAIGAGYAMSTYSTPYYSKTSPSRSSSKDQGEHAEITRIAIVDFDIHHGNGTEEIIRNLVPHDQKYPLPSSWAPLSFPSYKPWRDENDIDNVFFSSIHLFDEDNFYPCSGKGPQGDSAELQQVENILNLPLSFLGPKYLEEREKLTVKAKKA--LMDQASRQFREKVSKKLVPALRAFQPDLILLSAGFDGHADDFYYYLTEDDYAWVTTELTGVADECCEGRLVSVLEGGYNVEVSQKR 656
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Histone (deacetylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABG1_9STRA) HSP 1 Score: 198 bits (504), Expect = 8.100e-57 Identity = 121/253 (47.83%), Postives = 147/253 (58.10%), Query Frame = 1
Query: 4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRS---------GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDL-FYPASEEEEERFDD--NDANIVNVSLS---PLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVT---LALADCCPTGRVVSVLEGGYSLE 708
G V +F + P S+GFCLLNN AI AAYA Y S E+ RVAIVD DIHHGNGTEEI+R L P R PLP SW P + Y PW D DA NV+F S+ L D + FYP S + D N NIVN+ L P G P D TK + T + +A EF+ K L L FNPDL++ISAGFDGHV+DYYH+L+ YEW+T + +AD C GR+VSVLEGGY+L+
Sbjct: 242 GCVENDAFHEAPDTCSNGFCLLNNVAIAAAYAMSNYSTSYYSAGVSPFAEIRRVAIVDFDIHHGNGTEEIIRNLYPHYHRYPLPASWAPKSFHSYMPWRDSQDAQNVYFASLHLHDDQVPFYPGSGKGPHGQHDLANAENIVNIPLKRLIPHGKSPSD-----CSTKIRKT-FIEQASEEFRLKASSILFPSLLAFNPDLILISAGFDGHVDDYYHFLTEWDYEWITEKLVDIADECCCGRIVSVLEGGYNLQ 488
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTA3_GLOUD) HSP 1 Score: 197 bits (501), Expect = 4.530e-55 Identity = 115/252 (45.63%), Postives = 147/252 (58.33%), Query Frame = 1
Query: 4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRS-----------GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFDD---NDANIVNVSLSPLGPPPGDEPKK-RALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVT---LALADCCPTGRVVSVLEGGYSL 705
G V A +F + P M + GFCLLNN AIGAAYA Y S + RVAIVD DIHHGNGTEE +R L P PLPPSW P+ + YKPW D+ D +NV F S+ L D D FYP S + NI+N+ L LGP +E K A K + E +KA F+ LL L +F+PDL+++SAGFDGH +D+Y++LS + Y W+T A+AD C GR+VSVLEGGY++
Sbjct: 411 GCVEADTFHRRPEMCTCGFCLLNNVAIGAAYALSTYSASYYTSHNGKNASKPIERVAIVDFDIHHGNGTEECIRNLTPHKQNYPLPPSWAPLQFSSYKPWRDEKDQENVLFASIHLYDDDNFYPCSGSGPHGCSPELRDHPNIINMPLDTLGPKYLEERLKLTAKAKKSLMEQASKA---FRHNVTTRLLPALTKFHPDLILLSAGFDGHADDFYYFLSEDDYGWITEQIAAVADECCDGRIVSVLEGGYNV 659 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9783.17785.1 >prot_E_fasciculatus_S2_contig9783.17785.1 ID=prot_E_fasciculatus_S2_contig9783.17785.1|Name=mRNA_E_fasciculatus_S2_contig9783.17785.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=247bp SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDback to top mRNA from alignment at E_fasciculatus_S2_contig9783:341..4824+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9783.17785.1 ID=mRNA_E_fasciculatus_S2_contig9783.17785.1|Name=mRNA_E_fasciculatus_S2_contig9783.17785.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4484bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9783:341..4824+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9783:341..4824+ >mRNA_E_fasciculatus_S2_contig9783.17785.1 ID=mRNA_E_fasciculatus_S2_contig9783.17785.1|Name=mRNA_E_fasciculatus_S2_contig9783.17785.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=741bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9783:341..4824+ (Ectocarpus fasciculatus EfasUO2)back to top |