mRNA_E_fasciculatus_S2_contig9783.17785.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9783.17785.1
Unique NamemRNA_E_fasciculatus_S2_contig9783.17785.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN83_ECTSI)

HSP 1 Score: 486 bits (1251), Expect = 3.660e-162
Identity = 239/247 (96.76%), Postives = 241/247 (97.57%), Query Frame = 1
Query:    1 SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ 741
            SGS PASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPAS  EEERF+DNDANIVNVSLSPLGP PGDEPKKRALTKTKVTEYTNKACNEFKQKCQ TLLARLKEF+PDLLIISAGFDGHVEDYYHYLSNE YEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ
Sbjct:  577 SGSAPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEEERFNDNDANIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ 823          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ7_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 7.790e-161
Identity = 236/247 (95.55%), Postives = 240/247 (97.17%), Query Frame = 1
Query:    1 SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ 741
            SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPM TRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPAS  E+ERF+DND NIVNVSLSPLGP PGDEPKKRALTKTKVTEYTNKACNEFKQKCQ TLLARLKEF+PDLLIISAGFDGHVEDYYHYLSNE YEWVTLALADCCPTGRVVSVLEGGYSLEAR+SRAKAAQQ
Sbjct:  517 SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMNTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASGTEDERFNDNDDNIVNVSLSPLGPTPGDEPKKRALTKTKVTEYTNKACNEFKQKCQRTLLARLKEFSPDLLIISAGFDGHVEDYYHYLSNEVYEWVTLALADCCPTGRVVSVLEGGYSLEARMSRAKAAQQ 763          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVT0_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.420e-70
Identity = 135/240 (56.25%), Postives = 160/240 (66.67%), Query Frame = 1
Query:    4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRS--GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWL-DDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPP---PGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCP--TGRVVSVLEGGY 699
            G+VP+  FWK P M SSGFCLLNN AIGAAYAR  YGR+  G  +RVAIVD DIHHGNGTE+IVR L+P    LPLP SW P    ++KPWL ++ DA +VFFGS++L D   FYP S  E +  D    NIVNV L PL PP   PG   K + L   KV EY  +A  EF++K    LL +LK F PDLL ISAGFDGHVED+YHYL+ E Y W+T  L       +G+V+SVLEGGY
Sbjct:  585 GAVPSHCFWKAPSMTSSGFCLLNNVAIGAAYARQAYGRAPHGPFARVAIVDFDIHHGNGTEDIVRALQPSRRLLPLPASWAPEHYQIFKPWLSEEEDAASVFFGSINLVDGSHFYPCSGREMDN-DQAAPNIVNVELRPLRPPQAAPGTG-KAKMLGPRKVKEYCQRASGEFREKVSSMLLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGY 822          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Histone (deacetylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8J0_9STRA)

HSP 1 Score: 226 bits (576), Expect = 4.990e-70
Identity = 129/227 (56.83%), Postives = 152/227 (66.96%), Query Frame = 1
Query:   43 MNSSGFCLLNNAAIGAAYARCRYGRS--GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWL-DDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPP---PGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCP--TGRVVSVLEGGY 699
            M SSGFCLLNN AIGAAYAR  YGR+  G  +RVAIVD DIHHGNGTE+IVR L+P    LPLP SW P    ++KPWL ++ DA +VFFGS++L D   FYP S  E +  D    NIVNV L PL PP   PG   K + L   KV EY  +A  EF++K   TLL +LK F PDLL ISAGFDGHVED+YHYL+ E Y W+T  L       +G+V+SVLEGGY
Sbjct:    1 MTSSGFCLLNNVAIGAAYARQAYGRAPHGPFARVAIVDFDIHHGNGTEDIVRALQPSRRLLPLPASWAPEHYQLFKPWLSEEEDAASVFFGSINLVDGPHFYPCSGREMDN-DQAAPNIVNVELRPLRPPQAAPGTG-KAKMLGPRKVKEYCQRASVEFREKVSSTLLPKLKAFAPDLLFISAGFDGHVEDHYHYLTEEDYAWITRELVAVAEGTSGKVISVLEGGY 225          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Histone (deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 8.510e-63
Identity = 134/305 (43.93%), Postives = 162/305 (53.11%), Query Frame = 1
Query:    1 SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELS-----RVAIVDIDIHHGNGTEEI----------------VRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFDDNDAN------IVNVSLSPLGP-PPGDEPKKRALTKTKVTEY---TNKACN----------------------------------EFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCPTG--RVVSVLEGGYSLEAR 714
            SGSVP  +FW+NP MNSSGFCL+NN A+GAAYA  RYGR G+ +     RVAIVD DIH GNGTE+I                VR LRP   RLPLPPSWPP     YKPWLD+ DA+NV F S++L     FYPAS        D D +      I+N +L+P+G   PGD P +  L +   T     TN A                                    + +  C+  LL RL  F PD+L +SAGFDGH ED YH+ +N+ Y W+T  L +C   G  RVVSVLEGGYSL  R
Sbjct:  368 SGSVPGPNFWRNPDMNSSGFCLVNNVAVGAAYAMARYGRGGQGASGGRFRVAIVDFDIHQGNGTEDIHXXXXXXXXXXXXXXIVRSLRPRRRRLPLPPSWPPAFAATYKPWLDEDDAENVMFASINLVQGHDFYPASGHASAGGGDGDGDELHGGHIINAALAPVGGVAPGDLPPRARLAQVHNTSQQPQTNSAXXXXXXXXXXXXXXXXXXXXXXXPARAAKLRALASLQLRASCEEALLPRLAAFAPDVLFVSAGFDGHHEDMYHWNTNDDYAWLTRRLMECAAAGGGRVVSVLEGGYSLAPR 672          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D3_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.340e-60
Identity = 110/234 (47.01%), Postives = 145/234 (61.97%), Query Frame = 1
Query:   25 FWKNPGMNSSGFCLLNNAAIGAAYARCRYGR-------SGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQD-KDLFYPASEEEEERFDDNDANIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLALADCCPTGRVVSVLEGGYS 702
            FW++P M S GFCLLN AA+  AYAR RYGR       S  L ++AI+D D+HHGNGTEEIV+ L+P   + PLP SWP   + V+KPWLD+ D D VFFGSV L D K  FYP     +E  D     IVNV L+ +GP PGD   +++LT ++  +  ++A    ++     LL  L+ F+ DL+I SAGFDG+  D YH+     YEW+T A+ D  P    +S+LEGGYS
Sbjct:  254 FWRSPDMCSCGFCLLNTAAVAGAYARYRYGRPRAVPEQSKVLRKIAIIDFDVHHGNGTEEIVKGLKPHKVQKPLPDSWPAEYREVHKPWLDESDGDEVFFGSVHLWDAKGAFYPGGGGPQESSD----TIVNVPLAAVGPKPGDVRARQSLTASQRAKLCDEAGANLRRDVSAQLLPALQRFDADLVIFSAGFDGYEADLYHWFRESDYEWLTHAVLDASPRASCISILEGGYS 483          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R736_SAPDV)

HSP 1 Score: 208 bits (529), Expect = 2.980e-60
Identity = 124/249 (49.80%), Postives = 153/249 (61.45%), Query Frame = 1
Query:    4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRS---------GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDL-FYPASEEEEERFDDNDA--NIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVT---LALADCCPTGRVVSVLEGGYSL 705
            G V   +F K+PG  S GFCLLNN AIGAAYA   YG S           + RVAI+D DIHHGNGTEEIVR LR    R PLPPSW P T   Y PW DD DADNVFF S+ + D+   FYP S       ++  +   IVN+ L+ LG        KR   +T++ E+  +A +EF+ K    LL  L+ F PDL++IS+GFDGHV+DYYH L+   YEW+T   + +AD C  GR+VSVLEGGYSL
Sbjct:  273 GCVENDAFHKSPGGCSCGFCLLNNVAIGAAYAMTTYGPSHYSKASISHATVRRVAIIDFDIHHGNGTEEIVRNLRLHDHRYPLPPSWAPKTFPSYMPWRDDDDADNVFFASMHVYDETTAFYPGSGRGPHGRNELASCNTIVNIPLTNLG-----ASGKRGTERTRL-EHMERASSEFQSKATEVLLPALRAFAPDLILISSGFDGHVDDYYHGLTEWDYEWITQRLVEIADNCCDGRIVSVLEGGYSL 515          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K1_PYTOL)

HSP 1 Score: 204 bits (518), Expect = 1.160e-57
Identity = 116/264 (43.94%), Postives = 154/264 (58.33%), Query Frame = 1
Query:    4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRY------------------GRSGELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFD---DNDANIVNVSLSPLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVTLAL---ADCCPTGRVVSVLEGGYSLEARVSR 723
            G V +  F + P M + GFCLLNN AIGA YA   Y                  G   E++R+AIVD DIHHGNGTEEI+R L P   + PLP SW P++   YKPW D+ D DNVFF S+ L D+D FYP S +  +          NI+N+ LS LGP   +E +K  +   K     ++A  +F++K    L+  L+ F PDL+++SAGFDGH +D+Y+YL+ + Y WVT  L   AD C  GR+VSVLEGGY++E    R
Sbjct:  395 GCVESEGFHRRPEMCTCGFCLLNNVAIGAGYAMSTYSTPYYSKTSPSRSSSKDQGEHAEITRIAIVDFDIHHGNGTEEIIRNLVPHDQKYPLPSSWAPLSFPSYKPWRDENDIDNVFFSSIHLFDEDNFYPCSGKGPQGDSAELQQVENILNLPLSFLGPKYLEEREKLTVKAKKA--LMDQASRQFREKVSKKLVPALRAFQPDLILLSAGFDGHADDFYYYLTEDDYAWVTTELTGVADECCEGRLVSVLEGGYNVEVSQKR 656          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Histone (deacetylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABG1_9STRA)

HSP 1 Score: 198 bits (504), Expect = 8.100e-57
Identity = 121/253 (47.83%), Postives = 147/253 (58.10%), Query Frame = 1
Query:    4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRS---------GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDL-FYPASEEEEERFDD--NDANIVNVSLS---PLGPPPGDEPKKRALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVT---LALADCCPTGRVVSVLEGGYSLE 708
            G V   +F + P   S+GFCLLNN AI AAYA   Y  S          E+ RVAIVD DIHHGNGTEEI+R L P   R PLP SW P +   Y PW D  DA NV+F S+ L D  + FYP S +      D  N  NIVN+ L    P G  P D       TK + T +  +A  EF+ K    L   L  FNPDL++ISAGFDGHV+DYYH+L+   YEW+T   + +AD C  GR+VSVLEGGY+L+
Sbjct:  242 GCVENDAFHEAPDTCSNGFCLLNNVAIAAAYAMSNYSTSYYSAGVSPFAEIRRVAIVDFDIHHGNGTEEIIRNLYPHYHRYPLPASWAPKSFHSYMPWRDSQDAQNVYFASLHLHDDQVPFYPGSGKGPHGQHDLANAENIVNIPLKRLIPHGKSPSD-----CSTKIRKT-FIEQASEEFRLKASSILFPSLLAFNPDLILISAGFDGHVDDYYHFLTEWDYEWITEKLVDIADECCCGRIVSVLEGGYNLQ 488          
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTA3_GLOUD)

HSP 1 Score: 197 bits (501), Expect = 4.530e-55
Identity = 115/252 (45.63%), Postives = 147/252 (58.33%), Query Frame = 1
Query:    4 GSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRS-----------GELSRVAIVDIDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVFFGSVSLQDKDLFYPASEEEEERFDD---NDANIVNVSLSPLGPPPGDEPKK-RALTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDYYHYLSNEAYEWVT---LALADCCPTGRVVSVLEGGYSL 705
            G V A +F + P M + GFCLLNN AIGAAYA   Y  S             + RVAIVD DIHHGNGTEE +R L P     PLPPSW P+  + YKPW D+ D +NV F S+ L D D FYP S            +  NI+N+ L  LGP   +E  K  A  K  + E  +KA   F+      LL  L +F+PDL+++SAGFDGH +D+Y++LS + Y W+T    A+AD C  GR+VSVLEGGY++
Sbjct:  411 GCVEADTFHRRPEMCTCGFCLLNNVAIGAAYALSTYSASYYTSHNGKNASKPIERVAIVDFDIHHGNGTEECIRNLTPHKQNYPLPPSWAPLQFSSYKPWRDEKDQENVLFASIHLYDDDNFYPCSGSGPHGCSPELRDHPNIINMPLDTLGPKYLEERLKLTAKAKKSLMEQASKA---FRHNVTTRLLPALTKFHPDLILLSAGFDGHADDFYYFLSEDDYGWITEQIAAVADECCDGRIVSVLEGGYNV 659          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9783.17785.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Hist_deacetyl3.660e-16296.76domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Hist_deacetyl7.790e-16195.55domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hist_deacetyl1.420e-7056.25domain-containing protein n=1 Tax=Nannochloropsis ... [more]
Histone4.990e-7056.83deacetylase n=1 Tax=Nannochloropsis gaditana TaxID... [more]
Histone8.510e-6343.93deacetylase domain-containing protein n=1 Tax=Trib... [more]
Hypothetical1.340e-6047.01protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hist_deacetyl2.980e-6049.80domain-containing protein n=1 Tax=Saprolegnia dicl... [more]
Uncharacterized1.160e-5743.94protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Histone8.100e-5747.83deacetylase n=1 Tax=Thraustotheca clavata TaxID=74... [more]
Hist_deacetyl4.530e-5545.63domain-containing protein n=1 Tax=Globisporangium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9783contigE_fasciculatus_S2_contig9783:341..4824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score490.3
Seed ortholog evalue5.1e-136
Seed eggNOG ortholog2880.D8LN83
Model size741
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.NAD-dependent histone deacetylase activity (H3-K14 specific)
EggNOG OGsCOG0123@1,KOG1343@2759
Ec32 ortholog descriptionHistone deacetylase
Ec32 orthologEc-05_003890.1
Cds size741
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9783.17785.1prot_E_fasciculatus_S2_contig9783.17785.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9783 341..4824 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842621.5431044-CDS-E_fasciculatus_S2_contig9783:340..4471696842621.5431044-CDS-E_fasciculatus_S2_contig9783:340..447Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9783 341..447 +
1696842621.5543125-CDS-E_fasciculatus_S2_contig9783:943..10271696842621.5543125-CDS-E_fasciculatus_S2_contig9783:943..1027Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9783 944..1027 +
1696842621.5639734-CDS-E_fasciculatus_S2_contig9783:1588..17461696842621.5639734-CDS-E_fasciculatus_S2_contig9783:1588..1746Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9783 1589..1746 +
1696842621.5735946-CDS-E_fasciculatus_S2_contig9783:2933..30211696842621.5735946-CDS-E_fasciculatus_S2_contig9783:2933..3021Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9783 2934..3021 +
1696842621.5832722-CDS-E_fasciculatus_S2_contig9783:3368..34501696842621.5832722-CDS-E_fasciculatus_S2_contig9783:3368..3450Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9783 3369..3450 +
1696842621.5926366-CDS-E_fasciculatus_S2_contig9783:3814..38691696842621.5926366-CDS-E_fasciculatus_S2_contig9783:3814..3869Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9783 3815..3869 +
1696842621.6027074-CDS-E_fasciculatus_S2_contig9783:4657..48241696842621.6027074-CDS-E_fasciculatus_S2_contig9783:4657..4824Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9783 4658..4824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9783.17785.1

>prot_E_fasciculatus_S2_contig9783.17785.1 ID=prot_E_fasciculatus_S2_contig9783.17785.1|Name=mRNA_E_fasciculatus_S2_contig9783.17785.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=247bp
SGSVPASSFWKNPGMNSSGFCLLNNAAIGAAYARCRYGRSGELSRVAIVD
IDIHHGNGTEEIVRCLRPMTTRLPLPPSWPPMTKTVYKPWLDDGDADNVF
FGSVSLQDKDLFYPASEEEEERFDDNDANIVNVSLSPLGPPPGDEPKKRA
LTKTKVTEYTNKACNEFKQKCQMTLLARLKEFNPDLLIISAGFDGHVEDY
YHYLSNEAYEWVTLALADCCPTGRVVSVLEGGYSLEARVSRAKAAQQ
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mRNA from alignment at E_fasciculatus_S2_contig9783:341..4824+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9783.17785.1 ID=mRNA_E_fasciculatus_S2_contig9783.17785.1|Name=mRNA_E_fasciculatus_S2_contig9783.17785.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4484bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9783:341..4824+ (Ectocarpus fasciculatus EfasUO2)
AGCGGGTCCGTCCCAGCCTCATCCTTCTGGAAGAACCCCGGCATGAACAG CAGCGGCTTCTGCCTGCTCAACAACGCGGCCATCGGAGCGGCTTACGCCA GATGCAGGTGGGTGGCGAGCACAGGCGTACAGCAGCAGTGGTTGTTGTTG TTGTCTTAATTTAACCGTTCCGATCTCTCTACCCACCTTCATCTGTCCAT ACTGATCAAAACTTTACCGAGCGATTCCAGTGGTCGCGGGATAACTTACC TAAAAAAAGGTATGCTCAACTAATGGACCCGGACCTTATAGCCAGCAAGC CAATTTAAATCAGCGACAGCAGTAGAGAACGCAAATGCAGATGACGCACT CTACACAATGCCGGCAGCGGCAGCGATGCAGAATCATGTCTTGAGGATCG TCTTTGTTGTCCTCGTCTGGGAACTCCCACGCCGCTGCCACTGATTTTGG TTATGGTGGTGGTGGTGGTCGGTTGGTTGGTTCTTCTGCCGCTGCTGGTG CTCATCGTGCATATCGTTAGGATTAGAGATACCCACACCGCTGCTGCTGC TGCCGCTGCTGCTGCTGCTGCAATGTCTGCCATCTATTGGGTATTGTTGG AAGGTACGGGAGGTCTGGCGAGCTGTCTCGAGTGGCGATCGTGGACATCG ACATACACCACGGCAATGGCACGGAAGAGATCGTCCGGTAAGCAACGGGA GAGACCCAAGAAAAATAAAACTAGTTTGCGACGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAAAACTCCGATGTCT TTCTCGGGTGATCGATACGGCGATCTTGGACAGAGACATGGAGATACGTC TTTCTTTTTTGACGCCCGGAAGGAGTTAAGAACGTAGCTCCGATAGTCGT CAATGTTGTTAGGTGCCCGGTAAATAAGCCAGCAGCATCAGCAGCGATAG GAGAGACGTTTGGTGGCAGGTTCGAGGCTCGAAGCGAGTTCCGGCCATTC GCACTAAGATCTACTCTCTGTTGATCCCTACTCTTCCTGCGGCCATGTCG CACCGCCATGAATCAGATGATTTGTTGTTGTTTACAGAACCCCTTGGTTA GTGCGGACCGAGAGTAAACTGAGCAGATTCCAGGTGTCGGTCTACTCGCA AGGCAGCCCCCCCAAAAGCAGTACAAGTGGCTAGGTGGGTTGCTTGCATG ACAACCGCTCTTTGGTACCGCTTTGGTTGTGTCATTGCCGTCGTCTAGGT GCCTGCGGCCGATGACCACGCGGCTGCCACTGCCCCCTAGCTGGCCGCCC ATGACGAAGACCGTGTACAAGCCTTGGCTAGACGACGGCGACGCGGACAA CGTCTTCTTCGGGTCGGTCAGCCTCCAAGATAAGGACTTGTTCTACCCGG CATCGGGTAAGCGTCTGTCCTGTTGTTGCCGTTGCCGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTACAGGCAGTAGCTCTGAACTCACTGCTGT CTTTGGCCTCCTTCTTGCTGATGGCCATGATCAGTTGTTGTTGTTGTTGT TGCTGCTGCTGCTATTGCTGTGCTGCTGTTGCTGCTGCTGCTGCTCTTTG AAACAAAGAAGTGCTGTCTTGTGACCTCGGCCTTTAGAGTTGTTCTGGCA TGGGTGGGGGGCGAGGAGGTTGTTGTAGGACACAGACTCGAACCCTTCGT AGCAGTTGCTGCGTTTTTCCTCCCATGCTGTCGGGTTGTTGGCCGATAAT CGTCTTGTTGTTCGTGACAGCGCTCGCTTTATCTATTCGTGTAAAGTTTC CTGCCCGGCTTTGAACCCCTCCCTCCCTATCTCGTGTACAGCTTTCGAAA ACATACGTAAATTTAGAGACTTTCACGCGGTTCTGGTGAGGGACTTACGA TCCAACCAACGGGTATGGTCTTGTGTGCCTTTGCTGCATGGGCAAGGGAT ACGTACGCTTCTCTCGTTTTCGAGGCGTTCATTCCTCTTGGTTCCTTCTT GTATTTTCTTAATAGAAGGAAGAACACAAAATCATCTCTGTCGAGCTTTT TTGTTTTTGGCTCCTTCGCGTTTGTGTCCAACACTTATCCCTTCTAATAT ACTGGAAGCTCTTTTGGGGACTCTTTGGGACACATAACTCAGTTGCCTAT TTACCGCACCGTACAGTCACCCTAGGCACCGCTGTGTGAAACGCTCGTGA GAACCCTTGTTCTATCATGCTTGACTGAGGTGGTATGCTGTGGGATACGT TTGCTGTGTGATGCCTCTCCTCGGCCTCTGACTTGCTGTCACCATCTCCC AAGCCGCGTGTCCCCAAGGTGGTAAAACTGTACATCGCCTAGAACGGGAA AAATTCTCTGACTTGGCTTCAGTATGAAAAGGGTCCCCACGTGTTTTGGG GGCACTTTTCATACTGAAGCCAAGTCACCCCTTGTGTGGCAAGGAGCGGA GCTTCTTTGGAGGGACTGTAGCTTCTCGACCAATGGCTGACAAGCATTTT TGCGATATGTTTTTTTGCGGGGGACTGGGTACAGACAGTACTAGGAGGGT TTAACCACGACTTCTACTGCTTCCGCCGTTGTCTCAGGCACAGAGGAGGA GGAGGAGCGGTTCGATGACAACGACGCCAACATCGTCAACGTGTCCCTTT CACCTCTGGGACCTCCGCCGGGTGACGAGCCGTGAGTACAACATATGGTA CAGTCGGAGGCCCTCTGTAAGGCGGGTATGCGCCTTTTATAAGACCGATT CACCCGCCCAATACAGGGCACCCGCTTTCTTCACTGTGTAGAACAACTTG ATTATTTCGTCCGTGCCAGCCAACTTTACCCGCCTTATATGGGGCACCCG CCTTATAGAGGGCCTACGACTGTATTCGTACAGTTTCGTAAGTTTCCTTT TGCTTCGTTGAGGTTCGCTGGGCTCACACAGCTTTCATATCCCCAGCTTA CATCTCCGCGCTCATTCGCGCGTCGTGTGTGTATGTCTTTTTCTTTTGCG TGGGGGTGAATTGCATGAAACTCAACAGGAAGAAGCGTGCTTTGACGAAG ACGAAGGTCACCGAGTACACGAACAAGGCCTGCAACGAGTTCAAGCAAAA GTGCCAGATGGTGAGTGAGCCAGCCAGCCAGCCAGCCAGCCGTGCCGCGT CTTTATGGACCGCTCTGATGCTGTAGAGGCTGCGTCATTCAGTTGGCTTG CTTGCTCTGTGGGCCAGCGATGTCAGGAGTTGCCAAGCACAACAGCGTGT TCGATGCTCCTCGACACTGAACTAAGAGTATCGCTTGCAGATTCCATCGG TGGTGACTCGACATGTGCAACAACAGTTGATTAATTCACAATTACACATG CACCCGAGATACTCTTCTGATGTCAATCTGATCCACCCGTCTCGCTGAAT GGACGAACCCGTGTGCTTTGGTTGGTTTTGGATTCCTTGTTTGCTCTTCG CGGGGACATCGCGGACTGGAATAGACTCTTTTGGCCAGACTGAAGGAGTT CAACCCGGATCTGCTCATCATTTCAGCAGGTAGGATGCCGAGGCATGAGT GCTCCTTGATATGTGTACCACCTATTTTGGACCATGTAGTGCATACTGCT CACGTACATCTTTGTTTGCTGTCTTCTTTTACACCACGGAAGGCATACGT TTGCTTCAAGCGGACCCTATCGCCCAACCCTGCCTTGAACCACGCAATCC CTAGATGCTAGAGATTTATGACGTTTCCTTTAAGGGAAGGACGAAGTAGA CGGTGGAATGTCGTGTGGTGCACGACACAACCGAGCACCCAAATGTTGGA TTGATCTGGTGATAGAATGGCAACTCTGGAAGGCTGCGCTTTCTTTGGAA CGATGAAAACAGTCGTGCAAAGGTTGGTGGGCAGACACCACCCACCTTTG TGTTGTTCCTTGCGGCGCCGTGAGTAGGTTCAGGAAGAAGGAGTTAGCTC TCGGGGGGTGTAGCGTGCATCGTGACGATGTTTGTTGGAGTTTCTGAAAG TACGTTTGTATTGTCACCCGTCAAGACAAAAAAATGCGAAGGCACGAGAG AGCGCATGCTTCATCCTGTTTAGGCGTTGGATTTGCGGAAGAAACGATTA GAGCGGACGGATTCAAAATTTGAAGCGGCGACTCCTTGCCCGGCGCAGGC TGCCTTATCCAATCCAATACGAACATTATACTATCCTCGGTACGGAGACA GAAATCCACAGAAAAACGAAACGCAAGAACAGTAGGTGGTGGTGGTTCCC ACCTCATCTGTTTCGCCCTACAATGTGCCTAATAATAGCCGGATTTGATT GTGTTTCCCGTGATCAGGGTTCGACGGGCACGTTGAGGACTACTACCACT ACCTCTCCAACGAGGCGTACGAGTGGGTGACCCTGGCCCTGGCGGACTGC TGCCCCACCGGTCGGGTGGTTTCGGTGCTGGAGGGGGGCTACTCTCTGGA GGCCAGGGTGTCTCGAGCGAAGGCCGCGCAGCAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9783:341..4824+

>mRNA_E_fasciculatus_S2_contig9783.17785.1 ID=mRNA_E_fasciculatus_S2_contig9783.17785.1|Name=mRNA_E_fasciculatus_S2_contig9783.17785.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=741bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9783:341..4824+ (Ectocarpus fasciculatus EfasUO2)
AGCGGGTCCGTCCCAGCCTCATCCTTCTGGAAGAACCCCGGCATGAACAG
CAGCGGCTTCTGCCTGCTCAACAACGCGGCCATCGGAGCGGCTTACGCCA
GATGCAGGTACGGGAGGTCTGGCGAGCTGTCTCGAGTGGCGATCGTGGAC
ATCGACATACACCACGGCAATGGCACGGAAGAGATCGTCCGGTGCCTGCG
GCCGATGACCACGCGGCTGCCACTGCCCCCTAGCTGGCCGCCCATGACGA
AGACCGTGTACAAGCCTTGGCTAGACGACGGCGACGCGGACAACGTCTTC
TTCGGGTCGGTCAGCCTCCAAGATAAGGACTTGTTCTACCCGGCATCGGA
GGAGGAGGAGGAGCGGTTCGATGACAACGACGCCAACATCGTCAACGTGT
CCCTTTCACCTCTGGGACCTCCGCCGGGTGACGAGCCGAAGAAGCGTGCT
TTGACGAAGACGAAGGTCACCGAGTACACGAACAAGGCCTGCAACGAGTT
CAAGCAAAAGTGCCAGATGACTCTTTTGGCCAGACTGAAGGAGTTCAACC
CGGATCTGCTCATCATTTCAGCAGGGTTCGACGGGCACGTTGAGGACTAC
TACCACTACCTCTCCAACGAGGCGTACGAGTGGGTGACCCTGGCCCTGGC
GGACTGCTGCCCCACCGGTCGGGTGGTTTCGGTGCTGGAGGGGGGCTACT
CTCTGGAGGCCAGGGTGTCTCGAGCGAAGGCCGCGCAGCAG
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