mRNA_E_fasciculatus_S2_contig9781.17783.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ1_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.080e-75 Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 2
Query: 2 LASANAVMPPGGKVPEVFTHSPEGVGEKEVQTGIEALDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
LASA AVMPPGGKVPEVFTHSPE VGEKEVQTGIEALDVAEQEILA+IQELQRQLWEHKNKEDQRDEN KQGARSELD+EESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE
Sbjct: 173 LASAKAVMPPGGKVPEVFTHSPEVVGEKEVQTGIEALDVAEQEILANIQELQRQLWEHKNKEDQRDENRRKQGARSELDYEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 305
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Trehalose (6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB5_ECTSI) HSP 1 Score: 171 bits (432), Expect = 1.070e-46 Identity = 104/163 (63.80%), Postives = 111/163 (68.10%), Query Frame = 2
Query: 2 LASANAVMPPGGKVPEVFTHSPEGVGEKEVQTGIEALDVAEQ-EILASIQELQRQLW-----------------------------EHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
LASA AVMPPGGKVPEVFTHSPE VGEKEVQTGIEALDVAEQ + R LW + + + + G +GARSELD+EESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE
Sbjct: 44 LASAKAVMPPGGKVPEVFTHSPEVVGEKEVQTGIEALDVAEQFHCRLACTCCSRSLWAMITGNRWFRWDRAGKFWLVFRSFSGSCGSTRTRRTREMKTGRSRGARSELDYEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 206
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Alpha,alpha-trehalose-phosphate (synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YXH8_NANGC) HSP 1 Score: 87.4 bits (215), Expect = 1.930e-17 Identity = 50/97 (51.55%), Postives = 70/97 (72.16%), Query Frame = 2
Query: 110 LDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
+ + EQ ILA+IQELQRQLW+ K+++++RD G + GA E A +S K RV++V+NRLP+S R+ +TG+W F+MSSGGLVTAL+G R E
Sbjct: 1 MSLQEQAILANIQELQRQLWKVKSEQEKRD-TGEENGAAGE-------ASESVAKHRVIIVANRLPVSGGRDEKTGEWDFRMSSGGLVTALKGSREE 89
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Alpha,alpha-trehalose-phosphate (synthase (UDP-forming) n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W821_GLOUD) HSP 1 Score: 73.6 bits (179), Expect = 1.360e-12 Identity = 52/128 (40.62%), Postives = 69/128 (53.91%), Query Frame = 2
Query: 17 AVMPPGGKVPEVFTHSPEGVGEKEVQTGIEALDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
A P G + FT+ E V E ++ EQE+L IQELQRQL + ++E EE + + R+++VSNRLPIS Q+N TG+W+FKMSSGGLVTAL G+R E
Sbjct: 64 ANSPRTGTMRTGFTYEDEDVTE---------MNAREQELLVGIQELQRQL--------------SMVQIQTEKPQEEILPPATDSRRRLIMVSNRLPISFQKNETTGEWSFKMSSGGLVTALNGIRDE 168
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7E3_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.400e-12 Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 2
Query: 101 IEALDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
I ++ EQE+L IQELQRQL + ++E E+ + + R+++VSNRLPIS Q+N TG+W+FKMSSGGLVTAL G+R E
Sbjct: 87 ISEMNAREQELLVGIQELQRQL--------------SMVQIQTEKPQEQILPPVADSRRRLIMVSNRLPISFQKNEVTGEWSFKMSSGGLVTALNGIRDE 172
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD86_PYTOL) HSP 1 Score: 71.6 bits (174), Expect = 6.470e-12 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 2
Query: 110 LDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEE--SGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
++ EQE+LA+IQELQRQL + ++E EE SR++ R+++VSNRLPIS QRN TG+W+FKMSSGGLVTAL G+R +
Sbjct: 117 MNAREQELLANIQELQRQL--------------SMVQIQTEKPQEEIVPPMVDSRQR-RLIMVSNRLPISFQRNETTGEWSFKMSSGGLVTALNGIRDQ 200
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Alpha,alpha-trehalose-phosphate (synthase (UDP-forming) n=3 Tax=Phytophthora TaxID=4783 RepID=D0NRZ0_PHYIT) HSP 1 Score: 69.7 bits (169), Expect = 3.020e-11 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 2
Query: 110 LDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
++ EQE+L +IQELQRQL + +++ EE + R+++VSNRLPIS QRN TG+W+F MSSGGLVTAL G+R +
Sbjct: 141 MNAREQELLVNIQELQRQL--------------SMVQIQTDKPQEEIVPPMMDARHRLIMVSNRLPISFQRNENTGEWSFTMSSGGLVTALNGIRDQ 223
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Alpha,alpha-trehalose-phosphate (synthase (UDP-forming) n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RNP2_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 3.030e-11 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 2
Query: 110 LDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
++ EQE+L +IQELQRQL + +++ EE + R+++VSNRLPIS QRN TG+W+F MSSGGLVTAL G+R +
Sbjct: 147 MNAREQELLVNIQELQRQL--------------SMVQIQTDKPQEEIVPPMMDARHRLIMVSNRLPISFQRNEATGEWSFSMSSGGLVTALNGIRDQ 229
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Alpha,alpha-trehalose-phosphate (synthase (UDP-forming) n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXX4_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 3.040e-11 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 2
Query: 110 LDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
++ EQE+L +IQELQRQL + +++ EE + R+++VSNRLPIS QRN TG+W+F MSSGGLVTAL G+R +
Sbjct: 146 MNAREQELLVNIQELQRQL--------------SMVQIQTDKPQEEIVPPMMDARHRLIMVSNRLPISFQRNEATGEWSFSMSSGGLVTALNGIRDQ 228
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Match: Alpha,alpha-trehalose-phosphate (synthase (UDP-forming) n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP07_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 3.940e-11 Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 2
Query: 110 LDVAEQEILASIQELQRQLWEHKNKEDQRDENGTKQGARSELDHEESGAEQSREKSRVVVVSNRLPISAQRNLETGKWTFKMSSGGLVTALQGVRHE 400
++ EQE+L +IQELQRQL + +++ EE + R+++VSNRLPIS QRN TG+W F MSSGGLVTAL G+R +
Sbjct: 138 MNAREQELLVNIQELQRQL--------------SMVQIQTDKPQEEIVPPMMDARHRLIMVSNRLPISIQRNEVTGEWNFSMSSGGLVTALNGIRDQ 220 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9781.17783.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9781.17783.1 >prot_E_fasciculatus_S2_contig9781.17783.1 ID=prot_E_fasciculatus_S2_contig9781.17783.1|Name=mRNA_E_fasciculatus_S2_contig9781.17783.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=126bp MPPGGKVPEVFTHSPEGVGEKEVQTGIEALDVAEQEILASIQELQRQLWEback to top mRNA from alignment at E_fasciculatus_S2_contig9781:2783..5350- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9781.17783.1 ID=mRNA_E_fasciculatus_S2_contig9781.17783.1|Name=mRNA_E_fasciculatus_S2_contig9781.17783.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2568bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9781:2783..5350- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9781:2783..5350- >mRNA_E_fasciculatus_S2_contig9781.17783.1 ID=mRNA_E_fasciculatus_S2_contig9781.17783.1|Name=mRNA_E_fasciculatus_S2_contig9781.17783.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=378bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9781:2783..5350- (Ectocarpus fasciculatus EfasUO2)back to top |