mRNA_E_fasciculatus_S2_contig9761.17758.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9761.17758.1 vs.
Match: MYND-type (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK8_ECTSI) HSP 1 Score: 749 bits (1934), Expect = 8.170e-261 Identity = 452/476 (94.96%), Postives = 456/476 (95.80%), Query Frame = 1
Query: 1 MTATNGSAAADVKSNDVAKAVWAEIVKLRDEIPPPPAGGLYPDDKAAKAFQAADAAVASLCGVPREQMLEGFTQLVEGSRLNDLLNALVASEGHPALQHSCLMVLCGVASLQQAHVAITERRDVLQALLKALASPTAHQISPEGAVGEDDLQINPSVGSAICLNSLLVSCGGLGEDTIKVWQELDALSAITSALESHSVFEGGGDEDVLPAMLFGLATPLLTNFQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTA---AANGAVAVVDAEADKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGSAAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQKIKDKEAARAANIKCSRPTCGKRQGKASGGAKFKVCSRCQVAMYCSGECQKAHWPTHKMECRR 1419
MTA NGSA A VKSNDVAKAVWAEIVKLRDEIPPPPAGGLYPDDKAAKAFQAADAAVASLCGVPREQMLEGFTQLVEGSRLNDLLNALVASEGHPALQHSCLMVLCGVASLQQAHVAITERRDVLQALLKALASPTAHQISPEG+VGEDDLQINPSVGSAICLNSLLVSCGGLGEDTI VWQELDALSAITSALESHSVFEGGGDEDVLPAMLFGLATPLLTNFQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A GA AVVDAE DKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGG+ AAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQKIK+KEAARAANIKC+ CGKRQG ASGGAKFKVCSRCQVAMYCSGECQKAHW THKMECRR
Sbjct: 1 MTAANGSAEAVVKSNDVAKAVWAEIVKLRDEIPPPPAGGLYPDDKAAKAFQAADAAVASLCGVPREQMLEGFTQLVEGSRLNDLLNALVASEGHPALQHSCLMVLCGVASLQQAHVAITERRDVLQALLKALASPTAHQISPEGSVGEDDLQINPSVGSAICLNSLLVSCGGLGEDTINVWQELDALSAITSALESHSVFEGGGDEDVLPAMLFGLATPLLTNFQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDATAGAGAVVDAETDKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGATAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQKIKNKEAARAANIKCA--MCGKRQGNASGGAKFKVCSRCQVAMYCSGECQKAHWKTHKMECRR 474
BLAST of mRNA_E_fasciculatus_S2_contig9761.17758.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE) HSP 1 Score: 123 bits (308), Expect = 5.070e-26 Identity = 128/458 (27.95%), Postives = 186/458 (40.61%), Query Frame = 1
Query: 52 AKAVWAEIVKLRDEIPPPPAGGLYPDDKAAKAFQAADAAVASLCGVPREQMLEGFTQLVEGSRLNDLLNALVASEGHPALQHSCLMVLCGVASLQQAHVAITERRDVLQALLKALASPTAHQISPEGAVGEDDLQINPSVGSAICLNSLLVSCGGLGEDTIKVWQELDALSAITSALESHSVFEGGGDEDVLPAMLFGLATPLLTNFQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAAANGAVAVVDAEADKASRAARQRLAEAFLRLLAERREWVARSLAMAANASPTDLSGGGSAAAAPVTINNLLVNSLAHADLLGAFTRLTPVRLRAQAVAAARQCETDGTFAPGFGAQLARLLGLGGQQELNRRMAGHTVQKIKDKEAARAANIKCSRPTCGKRQGKASGGAKFKVCSRCQVAMYCSGECQKAHWPT-HKMECRRK 1422
A +W +I KLRD P G YPD++ AKA A A+ RE +L + ++ +G RL+DL++ + S+ HPAL+++CL +L V L+Q H + R DV++ LL L P ISP + I P+ +A L+ L + GGL + W L AL AI+SALE ++ + P ++F ++ LL+ A++ A + ++A +Q AE F+ W R +A + SP D GGG A N A A G P GG+Q + R GH + D + A + CSR TCG+RQG G FK C RC+ +YCS +CQ AHW HKMEC++K
Sbjct: 21 ADVLWDQIRKLRDCAPME--GEFYPDEEPAKALAAISVALKPWSSASRETLLSMYAKIADGKRLDDLISLFLGSQEHPALRYACLELLGFVGQLKQTHRRLLCRMDVIKTLLTVLERPRIVPISPYCPSND----ICPAAEAARVLSVLCAAEGGLKGAHAEEWVSLGALGAISSALEFNAAIPDYFTD--FPMVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGSLGSLFEGPLRGE--------ALMRAPLELRNQAVKQ--AEDFIAEGFSLGGWAVRLVAAILSESPADGGGGGDGVAG---------NXXXXXXXXXXXXXXVTDSASATAGGVGPTSGVSGPVRPS-----------GGKQVPSTR--GHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEG--FKRCGRCRTTVYCSKDCQVAHWKEKHKMECKKK 436
BLAST of mRNA_E_fasciculatus_S2_contig9761.17758.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RN99_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 3.090e-6 Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 1
Query: 1318 GAKFKVCSRCQVAMYCSGECQKAHWPTHKMEC 1413
G K KVCSRC+ A YCS ECQK HWPTHK +C
Sbjct: 164 GCKLKVCSRCKTAKYCSAECQKLHWPTHKKKC 195
BLAST of mRNA_E_fasciculatus_S2_contig9761.17758.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Fistulina hepatica ATCC 64428 TaxID=1128425 RepID=A0A0D7AH63_9AGAR) HSP 1 Score: 60.5 bits (145), Expect = 5.790e-6 Identity = 28/49 (57.14%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 1267 IKCSRPTCGKRQGKASGGAKFKVCSRCQVAMYCSGECQKAHWPTHKMEC 1413
+KCS +C KAS A + CSRC+ AMYCS ECQKAHWP HK C
Sbjct: 49 VKCSNGSC-----KASSEAHLQACSRCKNAMYCSKECQKAHWPVHKDFC 92
BLAST of mRNA_E_fasciculatus_S2_contig9761.17758.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Plicaturopsis crispa FD-325 SS-3 TaxID=944288 RepID=A0A0C9T9Q6_PLICR) HSP 1 Score: 58.9 bits (141), Expect = 2.510e-5 Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query: 1273 CSRPTCGKRQGKASGGAKFKVCSRCQVAMYCSGECQKAHWPTHKMECRRK 1422
C+RP CGK + +A+G FK CS C A YCS ECQK W THK CR +
Sbjct: 258 CARPGCGKVETEANG---FKRCSACMRACYCSSECQKMDWKTHKPACRER 304
BLAST of mRNA_E_fasciculatus_S2_contig9761.17758.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Tetrapyrgos nigripes TaxID=182062 RepID=A0A8H5GDA9_9AGAR) HSP 1 Score: 57.8 bits (138), Expect = 8.370e-5 Identity = 22/30 (73.33%), Postives = 24/30 (80.00%), Query Frame = 1
Query: 1327 FKVCSRCQVAMYCSGECQKAHWPTHKMECR 1416
K CSRCQVA YCS ECQK HWPTHK +C+
Sbjct: 258 LKNCSRCQVARYCSTECQKMHWPTHKQQCQ 287 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9761.17758.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9761.17758.1 >prot_E_fasciculatus_S2_contig9761.17758.1 ID=prot_E_fasciculatus_S2_contig9761.17758.1|Name=mRNA_E_fasciculatus_S2_contig9761.17758.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=475bp MTATNGSAAADVKSNDVAKAVWAEIVKLRDEIPPPPAGGLYPDDKAAKAFback to top mRNA from alignment at E_fasciculatus_S2_contig9761:1349..5652- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9761.17758.1 ID=mRNA_E_fasciculatus_S2_contig9761.17758.1|Name=mRNA_E_fasciculatus_S2_contig9761.17758.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4304bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9761:1349..5652- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9761:1349..5652- >mRNA_E_fasciculatus_S2_contig9761.17758.1 ID=mRNA_E_fasciculatus_S2_contig9761.17758.1|Name=mRNA_E_fasciculatus_S2_contig9761.17758.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1425bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9761:1349..5652- (Ectocarpus fasciculatus EfasUO2)back to top |