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Homology
BLAST of mRNA_E_fasciculatus_S2_contig9754.17749.1 vs.
Match: Ankyrin (repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH38_ECTSI) HSP 1 Score: 525 bits (1353), Expect = 4.990e-175 Identity = 378/578 (65.40%), Postives = 400/578 (69.20%), Query Frame = 1
Query: 1 KVLTVLLDVGCDVESADSGGWTPLHCASAAARASCVSALITRGADPSAVTPEGKRAVSLIGTDLAEGDEPNSETNETIWKMLRVPRAESEARXXXXXXXXXXXXXXXXXXYNDXXXXAYGPESIGGIVVFDSAGSGSATXXXXXXXXXXGSRQLHRSPTHPQEGPAGSGGK------APSNGHRDANGGGVPRERPAXXXXXXXXXXPQQQRKPRERVREFTEGQYAGKEGEFESDGGGGXGDAGVDPAVGGHR----------GGYKPTPDQYQNQSRTSRDKRVSTDVLVGGVAAGGGRPAGRSPPAGGVG-AGRTRGAERSPPPPSGKAGADGGRGVSFSLSXXAGGRAEGRKGVSQSPPQQQQLRGXXXXXXXXXXXXXXXXXXXXXLGDSKYEDXXXXXXXXXXXXXXXXXXXXXXXGRRPDDAAVAAVGHEESAELPRILRRPAGVAAAXXXXXXXXXXRDVRGTSXXXRGXXXSGRIGGAG-RPSIAADGRRSSAGRASGGGGDFNGDDTAED---THSTVFSEREGGGGGFSMGAAEGIVANRIAAFDPFSYSQKDAQSSGGRTPRHAEM 1671
+VLTVLLDVGCDVESADSGGWTPLHCA AAARASCV+ LI RGADPSA+TPEGKRA SLIGTDLAEGDEPNSETNETIWKMLRVPRAESEAR YNDXXXXAYGP+S+GGIVVFDSAGSGSATXXXXXXXXXXGSRQLHRSPTHPQE PAGSGGK AP+NGHRDANGGG+PRER A X EF EGQYAGKEG+ E D G VDPA G GYKPTPDQYQ+Q R SRDKRVSTDV+VGGVAAG RPAGRSP AGGVG AG TRGAERSPPP +GKAG+ G RGVSFSLS AGGR G S P ++ XXXXXXXXXXXXXX K+ED GRR D+AAV +ESAELPRILRRPAG AAA RD RG S G SGRIGGAG RPSIA DGRRSSAGRASGG G FN D+ ED + ST F ER GGGGGFSMGAAEGIVA+RIAA+DPFSYSQKDAQSSGG TPRHA+M
Sbjct: 306 EVLTVLLDVGCDVESADSGGWTPLHCACAAARASCVNTLIMRGADPSAITPEGKRAASLIGTDLAEGDEPNSETNETIWKMLRVPRAESEARRRRRTAKNAGNQRPPPP-YNDXXXXAYGPDSVGGIVVFDSAGSGSATXXXXXXXXXXGSRQLHRSPTHPQEAPAGSGGKGSRRGAAPTNGHRDANGGGIPRERSATRRGDQQHQXXXXXXXXXXXX-EFAEGQYAGKEGDLEGDTTGV-----VDPAAVGXXXXXXXXXXXXSGYKPTPDQYQSQPRPSRDKRVSTDVVVGGVAAG--RPAGRSPAAGGVGVAGETRGAERSPPP-TGKAGSQGERGVSFSLSPPAGGR-----GGSNPPQGSRKXXXXXXXXXXXXXXXXXPADRRAAAMGEKHEDEDGDVEMELESAVGVGGEAQ---GRRNDNAAVG----QESAELPRILRRPAGAAAAAADRTTIDGARDARGASAASTG---SGRIGGAGGRPSIATDGRRSSAGRASGGAGVFNSDEAGEDGRSSGSTAFGERPGGGGGFSMGAAEGIVASRIAAYDPFSYSQKDAQSSGG-TPRHADM 857
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 0 |
| Seed ortholog score | 536.6 |
| Seed ortholog evalue | 1.4e-149 |
| Seed eggNOG ortholog | 2880.D7FH38 |
| Model size | 1674 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| Cds size | 1674 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842619.0892475-CDS-E_fasciculatus_S2_contig9754:590..1030 | 1696842619.0892475-CDS-E_fasciculatus_S2_contig9754:590..1030 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9754 591..1030 - |
| 1696842619.1067772-CDS-E_fasciculatus_S2_contig9754:1389..2146 | 1696842619.1067772-CDS-E_fasciculatus_S2_contig9754:1389..2146 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9754 1390..2146 - |
| 1696842619.1206923-CDS-E_fasciculatus_S2_contig9754:2963..3099 | 1696842619.1206923-CDS-E_fasciculatus_S2_contig9754:2963..3099 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9754 2964..3099 - |
| 1696842619.1310704-CDS-E_fasciculatus_S2_contig9754:4462..4617 | 1696842619.1310704-CDS-E_fasciculatus_S2_contig9754:4462..4617 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9754 4463..4617 - |
| 1696842619.1488621-CDS-E_fasciculatus_S2_contig9754:5575..5761 | 1696842619.1488621-CDS-E_fasciculatus_S2_contig9754:5575..5761 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9754 5576..5761 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9754.17749.1 >prot_E_fasciculatus_S2_contig9754.17749.1 ID=prot_E_fasciculatus_S2_contig9754.17749.1|Name=mRNA_E_fasciculatus_S2_contig9754.17749.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=558bp
KVLTVLLDVGCDVESADSGGWTPLHCASAAARASCVSALITRGADPSAVT PEGKRAVSLIGTDLAEGDEPNSETNETIWKMLRVPRAESEARRRRRTAKN AGGNQRPPPPYNDRPPPAYGPESIGGIVVFDSAGSGSATGSASGSFSGSG SRQLHRSPTHPQEGPAGSGGKAPSNGHRDANGGGVPRERPAAAAAAARRG DPQQQRKPRERVREFTEGQYAGKEGEFESDGGGGGGDAGVDPAVGGHRGG YKPTPDQYQNQSRTSRDKRVSTDVLVGGVAAGGGRPAGRSPPAGGVGAGR TRGAERSPPPPSGKAGADGGRGVSFSLSPPAGGRAEGRKGVSQSPPQQQQ LRGGGTATTPSPGSRRAAAAAAAALGDSKYEDEDGDVEMELESGPGVGGG GGGGQGRRPDDAAVAAVGHEESAELPRILRRPAGVAAAAAAASGGDGARD VRGTSGASRGGGGSGRIGGAGRPSIAADGRRSSAGRASGGGGDFNGDDTA EDTHSTVFSEREGGGGGFSMGAAEGIVANRIAAFDPFSYSQKDAQSSGGR TPRHAEM* back to topmRNA from alignment at E_fasciculatus_S2_contig9754:591..5761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig9754.17749.1 ID=mRNA_E_fasciculatus_S2_contig9754.17749.1|Name=mRNA_E_fasciculatus_S2_contig9754.17749.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5171bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9754:591..5761- (Ectocarpus fasciculatus EfasUO2) AAGGTGCTGACGGTGCTTTTGGACGTGGGTTGCGATGTGGAGAGCGCTGA
CTCTGGAGGTTGGACCCCGCTCCACTGCGCCTCTGCGGCGGCCCGCGCTA
GCTGCGTGAGCGCGCTCATCACGAGGGGGGCGGACCCGTCTGCCGTTACG
CCGGAGGGGAAGCGGGCGGTGTCGCTCATCGGGACGGTGAGGTTCATTGC
TTTGTCTTTATTTGTTCGCGTAGACCGCGCTAACCGACCGGCAAAGAACA
TGCTTCTTAAGGCGATGATCTTGTTTGTGTGTGTTTACTACTAATAGCAT
CGACCGCGCTAACCGGCTGGCCAATGAAAATACGTCAGTCTCAGTGCGGC
GGAAAACACAACATGTTTCTACAGTCCACTATCTGGGACCACGGGACCGA
GCGTCGTAGGGGGAGCTACGCTATTCTCAGGATTAAAGACAGATACCGTA
GCAATAACAGAAGAAAAAGTGTGTGTGTGTTGTGGTGGTGCTGACTTTGT
GTGTGTGTGTTGTTGTTGTTGTTGCTGTTGGTGATGGTGTGCTTGGTGTT
TTTTTCTTCTTAATATGACACAACGAATCCATCTCTATCTAAGAAAATAG
TCAGAGATAGATTAGTATTGAATCCATAGCGTCAAGTAAAGCTACCTGTA
TGTCTACGATTTCCCAGACAGCATATAGGGACATCTCCCCTGCGGGTAAC
AGGGTCAACAAGACAGGTATGCTTGGTGCTGTTTTTGTGTGCTACTGCTG
TTTCGTGCTGTTGCCTCCGCATGACAACCTTCTTGCACCCGCACGGCTCC
AACTAAATAACACGGGCACCGCACGCAGCAACACACACCCCGACTCCGCG
AAAATGGTGCACAGAATTCTAGCGCCGCCAGCAGTGTCGGTATGGAACAG
ACCAGTCCACCGGCAGGCACTATGTGCGCCTTTCAGTGGTAGCGGCACTA
TTCACAACAGGGATATGTTGGTTTGGACGCCCGTGCCCCAGAGCCTTGAC
CAGCACTATACCGGGCATTGGCACTATCCAGCCGGCGCTTAACAAGGACG
TCTGCTGAACATCAGTTGGGCGCTGCAGAACCAAAAGAGCGGGAGAAATC
ACATCACGCTCTCGCCTTCTTCTTGTCTGTCCCTTTCGCGGCAGGATCTG
GCGGAGGGGGACGAGCCTAACAGCGAGACAAACGAGACAATCTGGAAGAT
GCTCAGGGTGCCAAGAGCGGAGTCGGAGGCCCGCCGCAGGAGGCGCACTG
CGAAGAACGCCGGCGGGAACCAGCGCCCCCCTCCCCCCTACAACGACCGG
TGCGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTTCACATTAGAAA
CCGTTCCGATCTCTCTCTACCCAGTACCTTCATATGTCCGTACTAGTCTT
AACACTTGACGCGGTCGATTCCCGTGGTCACAGGCTAACTCACCAAAATA
AGGTACAGCATACTGTACTAAAATAAAATGGTGCGTACGCCATTTTTTCT
TTTTTTGTCTTGAGTTCAAATCAGCGCTCACGGAACTTGTGCCGTTTTTT
TCCGACCCGTGGTCTCACAGAAAGAGTTCCTCTCCCTGAGGAGGCCCCCC
CCTCCTGCACTGTATGTGCTTCTATTTATTCATTTTTTTTCTGTCTTGAC
TTGAAATTAGCGCTCGCAGACCTTGTGCCGTTACCCCCCCTACCCACGCC
TATTGCGGTAATTTGCCTTCGATTTCACTGCTAGTACGGAGTAGAGGTCC
CGGATTGTGCCGGTTGCCCGGTACAATTTGAAACAGGAGATCTACGGCGT
ATCTCACAACACTTTGAATCCGAAGTAGATCAGCACCTTTTGGGAGAAAA
TGTTCTTAATCTGAAGGTCCCGCGTAGACCACGCAGGCAAGTTGTAAGGG
AGCACCTCTACAGGAAGGTACACTAAGTGTTTGCATATGCATGCATGCGG
TGCTGTTGCTTTTGTCTCTCGGAAACAACCCACAGCACCCCCGTGTTGGC
GTTTTTTTTATGGCGTATTTCTTCACAACTAGGAGGGTGCGAACACCAAC
CGATACATATCTCTCAGGAAAGCAACCCTCGACGAGATGTTTCCAAAACT
ACCCTTTTCGGCAGTGGTACATACACATACCCCCCCTGGTTGTGGAACAA
TACGCTTTGAAAGAAACGCCAACACGGGGATGGGTGCCATCTCTCCGACT
ATCACGGTAGTAAATTTCCCAAAAAGACGCTGTGCTTGACAAGCCTACAG
TACACACCGCTACCATCGTGCCCCACCCCATGTGGGCCCCGCCCTGCCTA
CCGTAAGGATGCGAGAGAACGCACGGTTGTGTTGAGTGTTTTTCGAATGT
TCGAAGACCCCCTTTTCAGACGTGGTATTTTGCTGGTTATACGGAGAAAG
CACTCTATGAAAAACGCTAACATCCTTACGGTAGCTACTTGCACGCAACA
CGAGCCCAACACATTGCACCCACCGGTTTCTACGACATGCAGGCCCCCGC
TAGCGTACGCACCGGAGTCCATTATATTCATGAGAAGAAACAAAAATGTT
AACATGCACGGCGGCGTGTCTTGTAATTTTGAAACCGACAAGGAACAGTT
TCTTTTTTTTCTTTTATTTATTCATTTTACGTACTCCTATTTATTTATTT
TCCCATCTGCAGGCCCCCGCCAGCGTACGGACCGGAGTCGATCGGAGGGA
TAGTTGTTTTCGACAGCGCCGGGAGTGGGAGTGCGACGGGGAGCGCGAGC
GGGAGCTTCAGCGGCTCCGGGTCGCGACAGCTGCACCGCAGCCCTACGGT
AAGGGGGTGCTTATGATATGGCGTGCCCCGCCCCCGTCCCCCTCCCCTCC
CCCCGAAAAACTGAAAAGTTTGCATAGAACTAACTGGTGAACATCCGCAT
GCCTGTACTCATTAAATACTGTGGTTATTGATGGAAACTGGCAATCACAC
GCATACTACGCATACTATAAGCAAGTGTGGTGTGTTTATTTTATTTATTG
GATGTTTCGATTTTATGTTTTTAGTTTTTTGGTGTTGGGGAGACGATATC
GATTGGATAGTCTTTCTGTCTTGCTGTCTTTTTATGTAGGATATCGAAGG
GATAGTCTTTCTGTCTTTCTACGTACGATATCGATTGGATAGTCTTTCTG
TCTTTTTATGTACGATATCGAAGGGATAGTCTTTCTGTCTTTCTATGTAC
GATATCGAAGGGATAGTCTTTCTGCCTTTCTATGTACGATATCGAAGGGA
TAGTCTTTCTGTCTTTCTATGTACGATATCGATTGGATAGTCTTGGGGAG
ACGATATCGAAGGGATAATCTTTCTGTCTTTTTATGTATTTTTATGTATG
CATGTATTTACGCACACGCCGAAGAAGAAATGCAGGTTCCTGTCAACCAG
TTGATAGTTTTTCGTTGGTGGGGGTGGTTGCTATTGCTGTAGTGTTCGGA
CAAAAGACTCTGCATGACAGCATTGTCGTGTTTAGTTACTTTTTGCGTGT
TCTGTGGATTTATTTTTCTTTTTTATGCATACGTCTCTTCCACGTGTTTT
TAATAGCCATGCGGACGGCGCCCGATCACCCCCCCCCCCCCGCGCGCGCG
CTCCTAATAACTCAGCACCCGCAGGAGGGGCCTGCTGGCAGCGGCGGGAA
AGCTCCTTCGAACGGCCATCGCGACGCGAATGGTGGGGGCGTCCCCCGCG
AACGACCGGCAGCCGCAGCCGCAGCCGCACGGCGTGGAGACCCGCAGCAG
CAGCGCAAGCCGCGCGAGCGAGTGAGAGAGTTCACGGAGGGGCAGTACGC
GGGCAAAGAAGGCGAGTTTGAGAGTGACGGCGGCGGGGGCGGGGGCGACG
CCGGTGTTGACCCCGCTGTCGGCGGGCACCGTGGCGGTTACAAGCCGACG
CCAGACCAGTACCAGAACCAGTCTCGAACCTCTCGCGACAAGAGGGTCTC
GACCGACGTGCTGGTGGGGGGGGTCGCGGCGGGGGGCGGACGGCCTGCGG
GGAGGTCTCCGCCCGCCGGCGGGGTTGGAGCGGGGAGGACCAGAGGGGCG
GAGAGGAGCCCGCCTCCTCCTTCCGGTAAGGCGGGCGCCGACGGGGGGCG
GGGGGTAAGCTTTTCTCTTTCGCCGCCCGCGGGGGGTAGGGCGGAGGGGA
GGAAGGGCGTCTCGCAGTCACCGCCGCAGCAGCAGCAGCTGAGGGGGGGA
GGCACGGCGACGACGCCGTCCCCCGGGAGCAGGAGAGCAGCGGCGGCGGC
GGCGGCGGCATTGGGGGACTCGAAGTACGAGGACGAGGACGGGGATGTGG
AGATGGAGCTGGAATCAGGGCCGGGCGTCGGAGGAGGAGGAGGAGGAGGG
CAAGGGAGGCGACCCGATGATGGTGAGACTTTTTTTTTTTTTTTTTCATG
GCAAGAGTTCACTTCACGCATGCACACCGTGAGTATGGTGTGTGTATGCA
ATTAGATATGTATGGGTGTGTTTTATTAATTAATTGTTTTTGTTTAGGGT
TTGGGGTGCATTATTTATTTTTTTGTTTTGGGGAGACCATGTGTGTGTTC
GTCCTTTCCAATGGCGACATTTACATTTTCCCCCATTTTTCCGTGGTAAG
ACGTGTACGACATTCTTCAGTGTAGGTAGAGCACTACACTCTGCAGGATG
TATGTAGGATGTTTAATTTGTACCCCGCCCTCGCATGTCCCCCTTTGATG
CACGCGCGTTTGCCAATAACAACAACAGCAGCGGCGGTGGCGGCGGTGGG
GCACGAAGAGTCAGCCGAGCTTCCCCGAATACTGCGACGACCGGCGGGAG
TCGCCGCGGCCGCCGCTGCTGCCAGCGGCGGCGACGGCGCTCGCGACGTC
CGCGGCACTTCCGGCGCCTCCCGCGGCGGCGGCGGCAGCGGCAGGATCGG
AGGAGCAGGAAGGCCGTCGATAGCGGCCGACGGCCGTCGGTCCTCCGCCG
GGAGGGCCAGCGGCGGCGGGGGCGACTTCAACGGCGACGATACCGCGGAG
GACACCCACAGCACCGTGTTCAGCGAGCGGGAAGGCGGGGGAGGCGGGTT
CAGCATGGGCGCGGCGGAGGGCATCGTGGCGAACCGGATAGCGGCGTTCG
ATCCGTTTTCGTACTCGCAGAAGGACGCCCAGAGCTCGGGGGGACGCACT
CCGAGGCACGCGGAGATGTAG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig9754:591..5761- >mRNA_E_fasciculatus_S2_contig9754.17749.1 ID=mRNA_E_fasciculatus_S2_contig9754.17749.1|Name=mRNA_E_fasciculatus_S2_contig9754.17749.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1674bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9754:591..5761- (Ectocarpus fasciculatus EfasUO2) AAGGTGCTGACGGTGCTTTTGGACGTGGGTTGCGATGTGGAGAGCGCTGA CTCTGGAGGTTGGACCCCGCTCCACTGCGCCTCTGCGGCGGCCCGCGCTA GCTGCGTGAGCGCGCTCATCACGAGGGGGGCGGACCCGTCTGCCGTTACG CCGGAGGGGAAGCGGGCGGTGTCGCTCATCGGGACGGATCTGGCGGAGGG GGACGAGCCTAACAGCGAGACAAACGAGACAATCTGGAAGATGCTCAGGG TGCCAAGAGCGGAGTCGGAGGCCCGCCGCAGGAGGCGCACTGCGAAGAAC GCCGGCGGGAACCAGCGCCCCCCTCCCCCCTACAACGACCGGCCCCCGCC AGCGTACGGACCGGAGTCGATCGGAGGGATAGTTGTTTTCGACAGCGCCG GGAGTGGGAGTGCGACGGGGAGCGCGAGCGGGAGCTTCAGCGGCTCCGGG TCGCGACAGCTGCACCGCAGCCCTACGCACCCGCAGGAGGGGCCTGCTGG CAGCGGCGGGAAAGCTCCTTCGAACGGCCATCGCGACGCGAATGGTGGGG GCGTCCCCCGCGAACGACCGGCAGCCGCAGCCGCAGCCGCACGGCGTGGA GACCCGCAGCAGCAGCGCAAGCCGCGCGAGCGAGTGAGAGAGTTCACGGA GGGGCAGTACGCGGGCAAAGAAGGCGAGTTTGAGAGTGACGGCGGCGGGG GCGGGGGCGACGCCGGTGTTGACCCCGCTGTCGGCGGGCACCGTGGCGGT TACAAGCCGACGCCAGACCAGTACCAGAACCAGTCTCGAACCTCTCGCGA CAAGAGGGTCTCGACCGACGTGCTGGTGGGGGGGGTCGCGGCGGGGGGCG GACGGCCTGCGGGGAGGTCTCCGCCCGCCGGCGGGGTTGGAGCGGGGAGG ACCAGAGGGGCGGAGAGGAGCCCGCCTCCTCCTTCCGGTAAGGCGGGCGC CGACGGGGGGCGGGGGGTAAGCTTTTCTCTTTCGCCGCCCGCGGGGGGTA GGGCGGAGGGGAGGAAGGGCGTCTCGCAGTCACCGCCGCAGCAGCAGCAG CTGAGGGGGGGAGGCACGGCGACGACGCCGTCCCCCGGGAGCAGGAGAGC AGCGGCGGCGGCGGCGGCGGCATTGGGGGACTCGAAGTACGAGGACGAGG ACGGGGATGTGGAGATGGAGCTGGAATCAGGGCCGGGCGTCGGAGGAGGA GGAGGAGGAGGGCAAGGGAGGCGACCCGATGATGCGGCGGTGGCGGCGGT GGGGCACGAAGAGTCAGCCGAGCTTCCCCGAATACTGCGACGACCGGCGG GAGTCGCCGCGGCCGCCGCTGCTGCCAGCGGCGGCGACGGCGCTCGCGAC GTCCGCGGCACTTCCGGCGCCTCCCGCGGCGGCGGCGGCAGCGGCAGGAT CGGAGGAGCAGGAAGGCCGTCGATAGCGGCCGACGGCCGTCGGTCCTCCG CCGGGAGGGCCAGCGGCGGCGGGGGCGACTTCAACGGCGACGATACCGCG GAGGACACCCACAGCACCGTGTTCAGCGAGCGGGAAGGCGGGGGAGGCGG GTTCAGCATGGGCGCGGCGGAGGGCATCGTGGCGAACCGGATAGCGGCGT TCGATCCGTTTTCGTACTCGCAGAAGGACGCCCAGAGCTCGGGGGGACGC ACTCCGAGGCACGCGGAGATGTAG back to top
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