mRNA_E_fasciculatus_S2_contig9751.17746.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9751.17746.1
Unique NamemRNA_E_fasciculatus_S2_contig9751.17746.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9751.17746.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH24_ECTSI)

HSP 1 Score: 823 bits (2125), Expect = 1.850e-292
Identity = 495/623 (79.45%), Postives = 518/623 (83.15%), Query Frame = 1 
Query:   19 PRPAVQDLEHLLRLDAANVGVEVEDKRQRSERLLSKAGNGELRAVRKRAGDGAAVDTVKDAQALREKARSLLKEAEGKKKLSKEEAKELENDLLKDINTQFGTRNENFALDVYERRCGTEVICSNERILVWPFPGNKFSGDCVPDGALDPPPELSKGWTKREARRGSGRSSSAAEPALPAGAAPERATGQGDEGQGQVVSSSRCADGPADDAAGSAA--GNADGVKRPAEGKGEEVSPGFAARSRRGSCLPQRATPSPSPAATT-MMTDGEDAXXXXXXXXXXXXXSTAATESPAVAMAMAEAEDKRSSMTXXXTNGGSTAIASEGSNFGSIYSVSGTTXXXXXXXXXXXXXPT-PGTTS--AGLMNLETFGGGAVYAWGEGPADPSEPKEEGEDDAVAEGEXXXXXXXEQEWSVWNRDMEAVSPPPPSEGGGPQAAGNAGKGSGAGMEEVPARNS-GWGSKTTRERRKEACFVVVGAVDGVAEEVMDAPEDAESWETRQVVVEVKNRMHRASDPPPLYDQIQLVTYMLMIGASVGDLVQFVKTS-AVRGNGKRGVPRKEARAAVTATTDDVLVSRVELDCRTYRHRKHWEQVVLPRLYEFARMVYRFRGDDLLRWRYLLATP 1863
            P   VQDL+HLLRLDAANVG EVEDKRQRSERLLSKAGNG+LRAVRK+AGDGAAVDTVKDAQALREKARSLLK+AE KKKLSKEEAKELENDLLKDINTQFGTRNENFALDVYERRCGTEVICSNERILVWPFPG+K SGD VPD ALDPPPELS+GWTKR +RRGSGRSSSAAEPALPA AAPERA GQG +GQGQV+SS+RC+D P DDAAGSA   GN  GVKRP EGK EE SPGFAAR RRGSCLPQ+A PSP+    T  MTDG+DA             S A T  PAVAM   E EDKRSSMT   TNGGSTAIASEGSNFGSIYS SGTT  XXXXXXXXX   T PG T   AGLMNLETFGG AVYAWGEGPA+PSEPK            XXXXXXX   WSVW RD EAV+PPP   G  PQ AGN   GS AGMEE PAR + GWGSKT RERRKEACFVVVGAVDGVAEEV DAPEDAESWETR+VVVEVKNRM++A++PPPLYDQIQLVTYMLMIGASVGDLVQFVKT+ A RGNGKR VPRKEA  AVTAT DDVLVSRVELDCRTYRHRKHW QVVLPRLYEFARMVYRFRGDDLLRWRYLLATP
Sbjct:   14 PSSPVQDLDHLLRLDAANVGAEVEDKRQRSERLLSKAGNGQLRAVRKKAGDGAAVDTVKDAQALREKARSLLKDAEVKKKLSKEEAKELENDLLKDINTQFGTRNENFALDVYERRCGTEVICSNERILVWPFPGSKISGDGVPDRALDPPPELSQGWTKRGSRRGSGRSSSAAEPALPASAAPERA-GQGPKGQGQVISSTRCSDDPVDDAAGSAGSNGNGSGVKRPTEGKREESSPGFAARLRRGSCLPQKAAPSPATVMMTESMTDGDDATARAQQEECRRG-SMAETLPPAVAMT--ETEDKRSSMTS--TNGGSTAIASEGSNFGSIYSASGTTPPXXXXXXXXXATATAPGATKTKAGLMNLETFGGDAVYAWGEGPAEPSEPK------XXXXXXXXXXXXXXXXWSVWARDTEAVNPPPSEVG--PQDAGN---GSAAGMEEEPARGAAGWGSKTMRERRKEACFVVVGAVDGVAEEVTDAPEDAESWETRRVVVEVKNRMYKATNPPPLYDQIQLVTYMLMIGASVGDLVQFVKTTTAGRGNGKREVPRKEAPTAVTATADDVLVSRVELDCRTYRHRKHWGQVVLPRLYEFARMVYRFRGDDLLRWRYLLATP 619
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9751.17746.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME7_9PHAE)

HSP 1 Score: 819 bits (2116), Expect = 4.940e-289
Identity = 496/633 (78.36%), Postives = 522/633 (82.46%), Query Frame = 1 
Query:    1 VRPPFLPRPAVQDLEHLLRLDAANVGVEVEDKRQRSERLLSKAGNGELRAVRKRAGDGAAVDTVKDAQALREKARSLLKEAEGKKKLSKEEAKELENDLLKDINTQFGTRNENFALDVYERRCGTEVICSNERILVWPFPGNKFSGDCVPDGALDPPPELSKGWTKREARRGSGRSSSAAEPALPAGAAPERATGQGDEGQGQVVSSSRCADGPADDAAGSAAGNADG--VKRPAEGKGEEVSPGFAARSRRGSCLPQRATPSPSPAATTMMTD----GEDAXXXXXXXXXXXXXSTAATESPAVAMAMAEAEDKRSSMTXXXTNGGSTAIASEGSNFGSIYSVSGTTXXXXXXXXXXXXXPT---PGTTS--AGLMNLETFGGGAVYAWGEGPADPSEPKEEGEDDAVAEGEXXXXXXXEQEWSVWNRDMEAVSPPPPSEGGGPQAAGNAGKGSGAGMEEVPARNS-GWGSKTTRERRKEACFVVVGAVDGVAEEVMDAPEDAESWETRQVVVEVKNRMHRASDPPPLYDQIQLVTYMLMIGASVGDLVQFVKTSAVRGNGKRGVPRKEARAAVTATTDDVLVSRVELDCRTYRHRKHWEQVVLPRLYEFARMVYRFRGDDLLRWRYLLATP 1863
            VR   L R   QDL+HLLRLDAANVG EVE+KRQRSERLLSKAGN EL AVRKRAGDGAA+DTVKDAQALREKARSLLKEAE KKKLSKEEAKELENDLLKDINTQFGTRNENFALDVYERRCGTEVICSN RILVWPFPG+K SGDCVPDGAL+PPPELS+GWTKRE+RRGSGRSSSAAEPALPA AAPE A GQG +GQGQV SS+RC+DGPAD AAGSA  N +G  V+RPAEGK EE  PGFAARSRRGSCLPQ+ATPSP   AT MMT+    G+DA             S AAT  PAVAMA  E EDKRSSMT   TNGGSTAIASEGSN GSI S SGTT  XXXXXXXXX       PG T   AG+MNLETFGG AVYAWGEGP +PS+PK+E          XXXXXXX  EWSVW RD EAVSPPP   G  PQ  GN   GS AGMEE  AR++ GWGSKT RERRKEACFVVVGAVDGVAEEV DAPEDAESWETR+VVVEVKNRM++A++PPPLYDQIQLVTYMLMIGASVGDLVQFVKTSA R NGKRGVPRKEA  AVTAT DDVLVSRVELDCRTYRHRKHW QVVLPRLYEFARMVYRFRGDDLLRWRYLLATP
Sbjct:   42 VRELLLERLLYQDLDHLLRLDAANVGAEVENKRQRSERLLSKAGNVELNAVRKRAGDGAAIDTVKDAQALREKARSLLKEAEVKKKLSKEEAKELENDLLKDINTQFGTRNENFALDVYERRCGTEVICSNARILVWPFPGSKISGDCVPDGALEPPPELSQGWTKRESRRGSGRSSSAAEPALPASAAPEVA-GQGRKGQGQVFSSTRCSDGPADSAAGSADSNCNGSGVRRPAEGKREESLPGFAARSRRGSCLPQKATPSP---ATMMMTESMTYGDDATARGQQEECRRG-SMAATLPPAVAMA--ETEDKRSSMTSSSTNGGSTAIASEGSNLGSICSASGTTSPXXXXXXXXXTVAVATAPGATKSKAGVMNLETFGGDAVYAWGEGPVEPSKPKKE------XXXXXXXXXXXXXEWSVWTRDTEAVSPPPCEVG--PQDGGN---GSAAGMEEESARSAPGWGSKTMRERRKEACFVVVGAVDGVAEEVTDAPEDAESWETRRVVVEVKNRMYKATNPPPLYDQIQLVTYMLMIGASVGDLVQFVKTSAGRVNGKRGVPRKEAPTAVTATADDVLVSRVELDCRTYRHRKHWGQVVLPRLYEFARMVYRFRGDDLLRWRYLLATP 656
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9751.17746.1 vs.
Match: Aste57867_1584 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAZ9_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.380e-14
Identity = 57/161 (35.40%), Postives = 78/161 (48.45%), Query Frame = 1 
Query: 1414 FVVVGAVDGVAEE-VMDAPEDAESWETRQVVVEVKNRMHRASDPPPLYDQIQLVTYMLMIGASVGDLVQFVKTSAVRGNGKRGVPRKEARAAVTATTDDVLVSRVELD----------CRTYRHRKHWEQVVLPRLYEFARMVYRFRGDDLLRWRYLLATP 1863
            F + G +DG A+  V+    D ++W T  ++VEVKNRM R  DP PL+D IQ+  YM MI    GD+VQ +  +                     TT  + +SRV LD          C        W  +V+PRLYE+A +VY FR  DL R  ++ A P
Sbjct:  247 FSICGMIDGTADMLVISDDNDDDTWSTEPILVEVKNRMARFRDPVPLHDCIQMAVYMKMINVRHGDMVQCLHRN-------------------DETT--IHISRVSLDAYPLTAAAAPCACQCTTDLWASLVVPRLYEYATLVYLFRTQDLRRLAFMQAPP 386
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9751.17746.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SH23_PHATR)

HSP 1 Score: 80.9 bits (198), Expect = 2.600e-12
Identity = 63/181 (34.81%), Postives = 87/181 (48.07%), Query Frame = 1 
Query: 1414 FVVVGAVDGVAEEVMDAPEDAESWET--------RQVVVEVKNRMHRASDPPPLYDQIQLVTYMLMIGASVGDLVQFVKTS-AVRGNGK-RGVPRKEA-------------RAAVTATTDDVLVS-------RVELDCRTYRHRKHWEQVVLPRLYEFARMVYRFRGDDLLRWRYLLATPV 1866
            F +VG+VDG+ EE+  +P+ + S  T        R V+VE K+RM +A   PPLY+QIQ +TY LM   S  D+VQ ++   +  G G    V   +A              AA  +TT    VS       RV L+    +H+  W   VLPRL  F   VY  R  D  R+R L+A  +
Sbjct:  329 FSIVGSVDGLREELF-SPDTSCSVSTEFGADLALRTVIVECKHRMRKALVVPPLYEQIQTITYCLMYEVSEADIVQVLRHDPSASGKGSCASVENNKALDAWVVSTQNQGKSAAAASTTKLSAVSKPTLTTYRVSLNDPVMQHQSQWRDTVLPRLRSFVEAVYAIRASDDKRYRLLVALSL 508
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9751.17746.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUX4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.550e-9
Identity = 57/158 (36.08%), Postives = 77/158 (48.73%), Query Frame = 1 
Query: 1387 TRERRKEACFVVVGAVDGVAEEVMDAPEDAESWETRQVVVEVKNRMHRASDPPPLYDQIQLVTYMLMIGASVGDLVQFVKTSAVRGNGKRGVPRKEARAAVTATTDDVLVSRVELDCRTYRHRKHWEQVVLPRLYEFARMVYRFRGDDLLRWRYLLAT 1860
            T+    +  F VVG VD V+      PE+ +S     +V+EVKNRMH+    P LYD++Q+VTY+ M+G S GDLVQ +K S          P    R       D +L S          H   W++VVLPRL   A  V   R D+  R  +L A+
Sbjct:  446 TQGSSNDELFRVVGYVDAVS------PENDDS-----IVIEVKNRMHQVR-APELYDKLQVVTYLQMLGWSRGDLVQRIKDS----------PDAPVRV------DRILRSE---------HENDWDRVVLPRLRAVAEAVLSLRADEGRRRAWLAAS 566
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9751.17746.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized1.850e-29279.45protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.940e-28978.36protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Aste57867_15842.380e-1435.40protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Hypothetical2.600e-1234.81protein n=1 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Hypothetical4.550e-936.08protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9751contigE_fasciculatus_S2_contig9751:1805..5442 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score839.3
Seed ortholog evalue1.1e-240
Seed eggNOG ortholog2880.D8LH24
Model size1881
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs2E1QQ@1,2S90U@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_010950.1
Cds size1881
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842618.933546-CDS-E_fasciculatus_S2_contig9751:1804..20231696842618.933546-CDS-E_fasciculatus_S2_contig9751:1804..2023Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9751 1805..2023 +
1696842618.9446986-CDS-E_fasciculatus_S2_contig9751:2689..28481696842618.9446986-CDS-E_fasciculatus_S2_contig9751:2689..2848Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9751 2690..2848 +
1696842618.954182-CDS-E_fasciculatus_S2_contig9751:3330..34381696842618.954182-CDS-E_fasciculatus_S2_contig9751:3330..3438Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9751 3331..3438 +
1696842618.9631765-CDS-E_fasciculatus_S2_contig9751:3762..48481696842618.9631765-CDS-E_fasciculatus_S2_contig9751:3762..4848Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9751 3763..4848 +
1696842618.971901-CDS-E_fasciculatus_S2_contig9751:5133..54421696842618.971901-CDS-E_fasciculatus_S2_contig9751:5133..5442Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9751 5134..5442 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9751.17746.1prot_E_fasciculatus_S2_contig9751.17746.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9751 1805..5442 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9751.17746.1

>prot_E_fasciculatus_S2_contig9751.17746.1 ID=prot_E_fasciculatus_S2_contig9751.17746.1|Name=mRNA_E_fasciculatus_S2_contig9751.17746.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=627bp
VRPPFLPRPAVQDLEHLLRLDAANVGVEVEDKRQRSERLLSKAGNGELRA
VRKRAGDGAAVDTVKDAQALREKARSLLKEAEGKKKLSKEEAKELENDLL
KDINTQFGTRNENFALDVYERRCGTEVICSNERILVWPFPGNKFSGDCVP
DGALDPPPELSKGWTKREARRGSGRSSSAAEPALPAGAAPERATGQGDEG
QGQVVSSSRCADGPADDAAGSAAGNADGVKRPAEGKGEEVSPGFAARSRR
GSCLPQRATPSPSPAATTMMTDGEDATTAGGQQEEGRRGSTAATESPAVA
MAMAEAEDKRSSMTSSSTNGGSTAIASEGSNFGSIYSVSGTTPPAAAAAA
AAAAAPTPGTTSAGLMNLETFGGGAVYAWGEGPADPSEPKEEGEDDAVAE
GEEEEAEPEEQEWSVWNRDMEAVSPPPPSEGGGPQAAGNAGKGSGAGMEE
VPARNSGWGSKTTRERRKEACFVVVGAVDGVAEEVMDAPEDAESWETRQV
VVEVKNRMHRASDPPPLYDQIQLVTYMLMIGASVGDLVQFVKTSAVRGNG
KRGVPRKEARAAVTATTDDVLVSRVELDCRTYRHRKHWEQVVLPRLYEFA
RMVYRFRGDDLLRWRYLLATPVRFFL*
back to top

mRNA from alignment at E_fasciculatus_S2_contig9751:1805..5442+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9751.17746.1 ID=mRNA_E_fasciculatus_S2_contig9751.17746.1|Name=mRNA_E_fasciculatus_S2_contig9751.17746.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3638bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9751:1805..5442+ (Ectocarpus fasciculatus EfasUO2)
GTTCGCCCTCCCTTCCTTCCTCGGCCGGCGGTGCAGGACCTCGAGCACCT
TCTTCGACTGGACGCGGCAAACGTGGGCGTCGAGGTGGAGGATAAACGGC
AGCGGTCGGAGAGGCTCTTGTCCAAGGCTGGCAACGGGGAGTTGAGGGCT
GTCCGGAAGAGGGCGGGTGACGGTGCTGCGGTGGACACTGTAAAGGACGC
GCAAGCCCTGCGGGAAAAGGTGACGATATCTGGTTATAACTTGCAAATTG
TTGTTGTTGTGTTGTTTGTTGTTGTTGTTGCTGTCTTGGCGGCGTATAAA
CCGTTCCGATCTCGCTACCCAGTACCTTCATCTGTCCGCACGTACTGATG
TTACACTTGACGCGGTCGATTCCCGTGGTCACAGGCTAACTTGCCTAAAA
AGAGGTATACTCAAATTGAATGGGCCTGGCGTGCCGACAAGATGTTGATA
CTTACCCCTTATTTTCTTTGATTTTGGTTCATGAGTTGGTGGTGGTGACC
GCACATGTTTGGCGAGGAGGAATAGAGTGTTACAGCAGTAGTTATTCTTG
AGCGTCATTGGTGATTCGGTGTTTTGAGCTCTACTTGATCTCTCCGCTCA
CGAAGGATGAGGCAAGTCACGTGTCCGACACACGTTTGGAGTGATGGGGC
GACTCATGGTTAAGGCTATGCTACAATGGTTACCCCCCGACTCGGAAGCA
TAAGCATTGCTGGTACTGGTGCACGTCTTTCAACACGATCTTTCATGCGC
GTTGTCAGTTTTGCGCAGTCGCGGACACCCTCTGACTCTGGCTCGTGTCT
AATAGTTACCCTCCTGGTGGCTGGACTGACCCCCTCCCCCTCCCCCCCCC
CGTCCGTAACGTGCATCTACGCCTGGACGCGTTAGGCCCGATCCCTCCTA
AAGGAAGCGGAGGGCAAGAAGAAGCTGTCGAAGGAAGAGGCGAAGGAGCT
CGAGAACGACCTTCTCAAAGACATCAACACGCAGTTCGGCACTCGAAATG
AGAACTTCGCGCTGGACGTGTACGAGCGACGGTGCGGGACGGAGGTGCGG
CAGCTTGACGGAGGCGTGTTCTTTTCTTTTTGTTTTTATTCTTTGTGTGT
GTGGAGATCGGTCGGTTGGTGTACATGGTCCGCGGAGGAAATACCAGTTA
GTATTTTTTTAGTACATTCAACAGTTGTGTACTGTACAAGCGTCGCGTCC
ATCTTCCACTGCTGTCCACCTCCTGTTGAATGTTGCATGTCGAATGTGTT
CTCATTTCTCTTTTCGCGCCTGAAAATCATTGAAATTGAAAGACGTGGTA
GAAAACATCGGAAAGTCAAGAGACGAACAAAAACTAGGGCGACGCTCCTG
TGCTATGCATGCATTCACCTCTCAGGCATTTTATTCCCACGCATGGCACA
TAGTGGCGCGATGATGATGATGATGTCCATTCACACCATGATGTCTCATC
ACACCCACGCGATTCGGTGTTGTGCCCCACCGTGTCTTGCTTGTACAATA
CAATGCATGACACTGTCGCATCACAGGTGATCTGCAGCAACGAGCGGATC
TTGGTGTGGCCTTTTCCAGGCAACAAGTTCTCCGGAGACTGCGTGCCCGA
CGGAGCACTCGACCCTCCGCCTGAGCTTAGCAAGGTACGTATGCATACGG
TCGTGTTCCTTAGACCGTTTGCTTGTTTTGGCTGCTGTAGCACCTTGAAC
ATGTTCGGGTCTTTCTTGCGCTTTGGGTATGGGTTCGTATTGGATCGCTT
GGCTTCGGAGACTCGGGGTCGATTTCGTCGTGCGTGTACATACGTTAGAA
ATAGTCGCTGAACTGAGCAATAGCAAGGAGGTAGTCTAGCGATCGATCAG
CAGCCATGTCCATGCACAGCCGGTGTGCTAGAACGGTGCACCCGAAGTCG
CCGATGACGCTCTTCTTACCTTCATGCGCACGCCGAACACTCGAATGACC
GCACACAGGGGTGGACGAAGAGAGAAGCGCGACGAGGTTCAGGCCGTTCC
TCGTCGGCGGCAGAGCCCGCATTACCCGCTGGCGCCGCGCCCGAGCGTGC
TACTGGACAAGGTGACGAAGGACAAGGACAAGTTGTCTCGTCGAGCAGGT
GTGCCGATGGCCCTGCGGATGATGCGGCCGGCAGCGCCGCCGGTAACGCT
GATGGCGTGAAGCGACCTGCGGAGGGGAAGGGGGAGGAGGTATCGCCGGG
GTTTGCTGCAAGGTCGAGGAGAGGGTCGTGTTTGCCCCAGAGGGCGACCC
CATCCCCATCGCCTGCTGCCACGACAATGATGACTGATGGCGAGGATGCA
ACAACCGCTGGGGGCCAACAGGAAGAAGGCCGGAGGGGCAGCACGGCGGC
GACGGAATCACCGGCGGTGGCGATGGCGATGGCGGAGGCCGAGGACAAAA
GGAGCTCCATGACGTCTTCCTCCACGAATGGAGGTTCGACCGCGATAGCC
TCCGAGGGAAGCAATTTCGGCAGCATCTATAGCGTGAGCGGAACCACGCC
GCCGGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCACCGACACCAGGGA
CCACAAGCGCCGGTCTGATGAACCTGGAGACCTTCGGGGGCGGCGCGGTT
TACGCGTGGGGGGAGGGCCCTGCCGATCCATCCGAACCAAAGGAAGAAGG
AGAAGACGATGCGGTAGCAGAAGGAGAAGAAGAAGAAGCAGAGCCGGAAG
AACAGGAGTGGTCGGTGTGGAACCGAGATATGGAGGCGGTGAGCCCGCCG
CCGCCGTCAGAGGGAGGAGGACCCCAGGCCGCCGGTAACGCCGGTAAGGG
TAGCGGTGCGGGAATGGAGGAGGTACCAGCGAGGAATAGCGGGTGGGGAT
CGAAGACGACGAGGGAAAGGAGGAAGGAGGCGTGTTTTGTGGTGGTCGGA
GCCGTGGACGGTGTCGCCGAGGAGGTGATGGACGCCCCCGAAGACGCGGA
GAGCTGGGAGACGAGGCAGGTGGTGGTGGAGGTGAAGAACAGGATGCACA
GGGCGAGCGACCCTCCTCCGCTCTATGACCAGATCCAGCTCGTGGTGAGT
GAAGCATGGAGGGAGGAAGAGTGTAGTGTATCATACATGATACCACCGTG
CTGTTGGTTGTTGGTCGTCGAACGGGCTGGAGGAATCGTTGAGTGATGGC
TCGCGGTAGAACATCGCACGAGACACGAGGCAATGATATGATATCATGCG
ACCGCCTTCTTCGTCGATTCACTCTCTCTCTTCCCTTTCGTCTCTTTGTG
CGTTTACCGAATATCGTGTCTCTTTGTGTGTTCAACGAATATCGTGTGTC
GTTTGTCCCCCCAACCCATGGCTTGGCAGACGTACATGCTCATGATCGGA
GCCAGCGTCGGCGACTTGGTGCAGTTCGTCAAGACCAGCGCTGTCCGCGG
AAACGGCAAAAGAGGCGTTCCAAGGAAAGAGGCCCGGGCGGCAGTTACAG
CGACGACAGACGATGTGCTGGTGTCAAGGGTGGAGCTTGACTGCCGGACC
TACCGCCACCGCAAGCACTGGGAGCAGGTGGTCCTGCCCCGTCTGTACGA
GTTCGCCAGGATGGTGTACAGGTTCAGGGGGGACGACCTCTTGAGGTGGC
GCTACCTACTGGCGACCCCGGTGCGTTTTTTTTTGTAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9751:1805..5442+

>mRNA_E_fasciculatus_S2_contig9751.17746.1 ID=mRNA_E_fasciculatus_S2_contig9751.17746.1|Name=mRNA_E_fasciculatus_S2_contig9751.17746.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1881bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9751:1805..5442+ (Ectocarpus fasciculatus EfasUO2)
GTTCGCCCTCCCTTCCTTCCTCGGCCGGCGGTGCAGGACCTCGAGCACCT
TCTTCGACTGGACGCGGCAAACGTGGGCGTCGAGGTGGAGGATAAACGGC
AGCGGTCGGAGAGGCTCTTGTCCAAGGCTGGCAACGGGGAGTTGAGGGCT
GTCCGGAAGAGGGCGGGTGACGGTGCTGCGGTGGACACTGTAAAGGACGC
GCAAGCCCTGCGGGAAAAGGCCCGATCCCTCCTAAAGGAAGCGGAGGGCA
AGAAGAAGCTGTCGAAGGAAGAGGCGAAGGAGCTCGAGAACGACCTTCTC
AAAGACATCAACACGCAGTTCGGCACTCGAAATGAGAACTTCGCGCTGGA
CGTGTACGAGCGACGGTGCGGGACGGAGGTGATCTGCAGCAACGAGCGGA
TCTTGGTGTGGCCTTTTCCAGGCAACAAGTTCTCCGGAGACTGCGTGCCC
GACGGAGCACTCGACCCTCCGCCTGAGCTTAGCAAGGGGTGGACGAAGAG
AGAAGCGCGACGAGGTTCAGGCCGTTCCTCGTCGGCGGCAGAGCCCGCAT
TACCCGCTGGCGCCGCGCCCGAGCGTGCTACTGGACAAGGTGACGAAGGA
CAAGGACAAGTTGTCTCGTCGAGCAGGTGTGCCGATGGCCCTGCGGATGA
TGCGGCCGGCAGCGCCGCCGGTAACGCTGATGGCGTGAAGCGACCTGCGG
AGGGGAAGGGGGAGGAGGTATCGCCGGGGTTTGCTGCAAGGTCGAGGAGA
GGGTCGTGTTTGCCCCAGAGGGCGACCCCATCCCCATCGCCTGCTGCCAC
GACAATGATGACTGATGGCGAGGATGCAACAACCGCTGGGGGCCAACAGG
AAGAAGGCCGGAGGGGCAGCACGGCGGCGACGGAATCACCGGCGGTGGCG
ATGGCGATGGCGGAGGCCGAGGACAAAAGGAGCTCCATGACGTCTTCCTC
CACGAATGGAGGTTCGACCGCGATAGCCTCCGAGGGAAGCAATTTCGGCA
GCATCTATAGCGTGAGCGGAACCACGCCGCCGGCAGCAGCAGCGGCAGCA
GCAGCAGCAGCAGCACCGACACCAGGGACCACAAGCGCCGGTCTGATGAA
CCTGGAGACCTTCGGGGGCGGCGCGGTTTACGCGTGGGGGGAGGGCCCTG
CCGATCCATCCGAACCAAAGGAAGAAGGAGAAGACGATGCGGTAGCAGAA
GGAGAAGAAGAAGAAGCAGAGCCGGAAGAACAGGAGTGGTCGGTGTGGAA
CCGAGATATGGAGGCGGTGAGCCCGCCGCCGCCGTCAGAGGGAGGAGGAC
CCCAGGCCGCCGGTAACGCCGGTAAGGGTAGCGGTGCGGGAATGGAGGAG
GTACCAGCGAGGAATAGCGGGTGGGGATCGAAGACGACGAGGGAAAGGAG
GAAGGAGGCGTGTTTTGTGGTGGTCGGAGCCGTGGACGGTGTCGCCGAGG
AGGTGATGGACGCCCCCGAAGACGCGGAGAGCTGGGAGACGAGGCAGGTG
GTGGTGGAGGTGAAGAACAGGATGCACAGGGCGAGCGACCCTCCTCCGCT
CTATGACCAGATCCAGCTCGTGACGTACATGCTCATGATCGGAGCCAGCG
TCGGCGACTTGGTGCAGTTCGTCAAGACCAGCGCTGTCCGCGGAAACGGC
AAAAGAGGCGTTCCAAGGAAAGAGGCCCGGGCGGCAGTTACAGCGACGAC
AGACGATGTGCTGGTGTCAAGGGTGGAGCTTGACTGCCGGACCTACCGCC
ACCGCAAGCACTGGGAGCAGGTGGTCCTGCCCCGTCTGTACGAGTTCGCC
AGGATGGTGTACAGGTTCAGGGGGGACGACCTCTTGAGGTGGCGCTACCT
ACTGGCGACCCCGGTGCGTTTTTTTTTGTAG
back to top