mRNA_E_fasciculatus_S2_contig9710.17717.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: GT4 (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKS6_9PHAE) HSP 1 Score: 417 bits (1072), Expect = 6.000e-142 Identity = 211/226 (93.36%), Postives = 217/226 (96.02%), Query Frame = 1
Query: 4 AVQQVQREAKERYDAAVAATVDRDDSDRKLVALPPRVVGICVGEGEAMRTLRGVDGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDHLVKDGSNGFCVPSGDQDGYVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYRSCRETQNKTFRARVAKKRGLPFWEAFGLLIYYVFEAAKMMTAAVAFFTQGRDSEV 681
AVQQVQREAKERYDAAVAA RD SD K V LPPRVVGICVGEGEAMRTLRGVDGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDHLV+DGSNGFCVPSGDQDGYVEGLRKLVQD+DLR+KMSATGRQ+ALGYGTTQLYDGM+DIYRSCRETQNKTFRARVAKKRG PFWEAFGLLIYYVFEAAKMMTAA AFFT+GRDSEV
Sbjct: 248 AVQQVQREAKERYDAAVAAAAQRD-SDSK-VPLPPRVVGICVGEGEAMRTLRGVDGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDHLVQDGSNGFCVPSGDQDGYVEGLRKLVQDKDLRNKMSATGRQMALGYGTTQLYDGMMDIYRSCRETQNKTFRARVAKKRGFPFWEAFGLLIYYVFEAAKMMTAAAAFFTEGRDSEV 471
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: Hypothetical (protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTT6_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.960e-24 Identity = 54/151 (35.76%), Postives = 83/151 (54.97%), Query Frame = 1
Query: 76 DSDRKLVALPPRVVGICVGEGEAMRTLRGVDGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDHLVKDGSNGFCVPSGDQDGYVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYRSCRE 528
D R+L G+ VG+G + ++ V GW +GEEL AS D ++ PS++ETFG VTLEA++ G+PCVV + C HLV++G NGF PSGD + + ++++ D LR A Y +++ ML+ Y+ C +
Sbjct: 277 DVARRLTQEGVPFKGLVVGKGSFQTEMEALENVRVAGWLSGEELGVAYASADCLLFPSDVETFGNVTLEALASGVPCVVEQGCSGHLVENGKNGFTAPSGDVEKFYTATKRIIMDAQLRKSFRPKCVAKAKEYERSKILQRMLEHYKDCHQ 427
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5M5_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.080e-23 Identity = 68/195 (34.87%), Postives = 91/195 (46.67%), Query Frame = 1
Query: 118 GICVGEGEAMRTLRGVDGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDHLVKDGSNGFCVPSGDQDG------------YVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYRSCRETQNKTFRARVAKKRGLPFWEAFGLLIYYVFEAAKMMTAAVAFFTQG 666
G VG G G+ + +GW +G ELA AS DI++ PS++ETFG VTLEA+ CG+P VV C HLV DG GF V G D Y +R+LV D DLR K + R A Y + + M+D Y TQ R R + G F E ++++ F A + V + G
Sbjct: 315 GAVVGVGPCQTYFDGIPYIQTLGWMSGVELAEAYASADILLFPSDVETFGNVTLEALGCGIPAVVEENCSRHLVSDGVEGFAVHQGIDDPNDRSQYEACLNRYFTKVRQLVVDPDLRAKCARNARVKADTYSNSMVQQRMIDNYHHALNTQ---VRNRAPPREGARFQEVRTNVLHWFFAYAARVVIFVLWLLLG 506
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYE6_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.590e-22 Identity = 56/153 (36.60%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 112 VVGICVGEGEAMRTLRGVDGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDHLVKDGSNGFCVPSGDQDG------------YVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYRSCRETQ 534
V G+ VG G G+ V GW +G LA AS DI++ PS++ETFG VTLEA++CG+P VV C HLV DG G+ V G D Y + + +V DE LR + + R A Y + M+D Y++ E Q
Sbjct: 2 VKGMVVGVGPCQNMFEGMSYVTVKGWLSGMALAEAYASSDILLFPSDVETFGNVTLEALACGVPSVVEHNCSQHLVTDGCEGYAVHQGVDDPDDKEQYAACVDRYYKATKSIVDDESLRRRFAHNARLKAETYSNRAVQQRMVDNYQNGFEVQ 154
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: Glycosyltransferase (involved in cell wall bisynthesis n=1 Tax=Fodinibius salinus TaxID=860790 RepID=A0A5D3YHH7_9BACT) HSP 1 Score: 103 bits (256), Expect = 3.090e-22 Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 1
Query: 76 DSDRKLVALPPRVVGICVGEGEAMRTLRGV-DGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDH-LVKDGSNGFCVPSGDQDGYVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYR 516
D+ +KL + + VG+G A++ L + G+ G+EL+R AS D+ + PSE ETFG VTLEAMS GLPCVV G LV+ G NGF P D + + E + K+V+D++L +M RQ AL Y + +LD YR
Sbjct: 224 DTVKKLQQTHQNIKPMIVGDGPALKELEHMLTDAHFTGFITGDELSRAYASSDVFLFPSETETFGNVTLEAMSSGLPCVVADATGSRSLVESGVNGFLAPPRDTEVFAECIEKIVEDDELATEMGEAARQKALAYSWDNVNGKLLDNYR 372
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC69_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.400e-21 Identity = 52/135 (38.52%), Postives = 74/135 (54.81%), Query Frame = 1
Query: 112 VVGICVGEGEAMRTLRGVDGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDHLVKDGSNGFCVPSGDQDGYVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYR 516
V + VG G + L + GW +G L AS DI++ PS++ETFG VTLEA+S G P VV ++CG+HLV G NG GD +G+ + R+LV D LR KM+ R+ A + + M + Y+
Sbjct: 290 VKALVVGSGTFEKYLTTLKDATICGWLSGTSLGEAYASSDILLFPSDVETFGNVTLEALSSGCPAVVEKKCGEHLVDHGINGLTCQCGDAEGFYQATRRLVLDATLRKKMAVAARESAWKFERNIILQQMAENYK 424
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: Glycosyltransferase (family 1 protein n=2 Tax=Aliifodinibius TaxID=1397107 RepID=A0A6M1TBF0_9BACT) HSP 1 Score: 100 bits (250), Expect = 2.160e-21 Identity = 61/149 (40.94%), Postives = 81/149 (54.36%), Query Frame = 1
Query: 76 DSDRKLVALPPRVVGICVGEGEAMRTLRGV-DGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDH-LVKDGSNGFCVPSGDQDGYVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYR 516
D+ ++L V + VG+G A + L + G+ G+EL+R AS DI + PSE ETFG VTLEAMS GLPCVV G LV+ G NGF P D G+ + + KL+ D DL +M RQ A+ Y + +LD YR
Sbjct: 224 DTVKRLQQSHDNVKSMIVGDGPAKKELEHMLPEAHFTGFVTGDELSRAYASSDIFLFPSETETFGNVTLEAMSSGLPCVVADATGSRSLVESGVNGFLAPPRDTRGFAKCVAKLIDDSDLWQEMGEAARQKAIAYSWENVNGKLLDNYR 372
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: Glycosyltransferase (involved in cell wall bisynthesis n=1 Tax=Aliifodinibius sediminis TaxID=1214077 RepID=A0A521C872_9BACT) HSP 1 Score: 100 bits (249), Expect = 2.990e-21 Identity = 58/149 (38.93%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 76 DSDRKLVALPPRVVGICVGEGEAMRTLRGV-DGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDH-LVKDGSNGFCVPSGDQDGYVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYR 516
D+ +KL P + + VG+G A + L + G G+ G +L+R AS D+ + PSE ETFG VTLEAMS GLPCVV G LV+ G NGF P D + + + K+ D L+++MS RQ AL Y + +++ YR
Sbjct: 224 DTIKKLQLEDPHIRAMVVGDGPAKKELEHMLPGAHFTGFITGTDLSRAYASSDVFLFPSETETFGNVTLEAMSSGLPCVVADATGSRSLVESGVNGFLAPPRDTHEFAKCISKIAHDSQLQERMSKAARQKALAYSWENVNSKLVENYR 372
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: glycosyltransferase (family 1 protein n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI0018E48E10) HSP 1 Score: 99.4 bits (246), Expect = 8.060e-21 Identity = 60/153 (39.22%), Postives = 83/153 (54.25%), Query Frame = 1
Query: 79 SDRKLVALPPRVVGICVGEGEAMRTLRGV-DGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDH-LVKDGSNGFCVPSGDQDGYVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYRSCRET 531
S +KL + + VG+G A L+ + V G+ GE+LA AS D+ + PS ETFG VTLEAMSCGLPC+V G LV+DG NGF D+ + E L+K+V+ LR +M R+ ALGY ++ ++ YR T
Sbjct: 227 SVQKLSEENAHIKAMVVGDGPAKAELQELMPEAVYTGFLNGEDLATAYASSDVFMFPSHTETFGNVTLEAMSCGLPCLVANATGSRSLVEDGVNGFLAEPQDKTDFTEKLKKIVESISLRKEMGERSREKALGYEWDEINGQLVQNYREVLNT 379
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2G8F2_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 1.090e-20 Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 76 DSDRKLVALPPRVVGICVGEGEAMRTLRGV-DGVVCVGWKAGEELARVIASCDIMVAPSEIETFGRVTLEAMSCGLPCVVNRECGDH-LVKDGSNGFCVPSGDQDGYVEGLRKLVQDEDLRDKMSATGRQIALGYGTTQLYDGMLDIYR 516
D+ ++L + + VG+G A + L + G+ G+EL+R AS D+ + PSE ETFG VTLEAMS GLPCVV G LV+ G NGF D G+ E + L DE+L D+MS RQ AL Y + + +L+ YR
Sbjct: 224 DTVKRLQQDHSNIRAMIVGDGPAKKELEHMLSEAHFTGFITGDELSRAYASSDVFLFPSETETFGNVTLEAMSSGLPCVVADATGSRSLVESGVNGFLAAPRDTQGFAERVADLATDEELWDQMSKAARQKALAYSWENVNNKLLENYR 372 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9710.17717.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9710.17717.1 >prot_E_fasciculatus_S2_contig9710.17717.1 ID=prot_E_fasciculatus_S2_contig9710.17717.1|Name=mRNA_E_fasciculatus_S2_contig9710.17717.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=227bp QAVQQVQREAKERYDAAVAATVDRDDSDRKLVALPPRVVGICVGEGEAMRback to top mRNA from alignment at E_fasciculatus_S2_contig9710:2183..5373- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9710.17717.1 ID=mRNA_E_fasciculatus_S2_contig9710.17717.1|Name=mRNA_E_fasciculatus_S2_contig9710.17717.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3191bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9710:2183..5373- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9710:2183..5373- >mRNA_E_fasciculatus_S2_contig9710.17717.1 ID=mRNA_E_fasciculatus_S2_contig9710.17717.1|Name=mRNA_E_fasciculatus_S2_contig9710.17717.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=681bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9710:2183..5373- (Ectocarpus fasciculatus EfasUO2)back to top |