mRNA_E_fasciculatus_S2_contig97.17704.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig97.17704.1
Unique NamemRNA_E_fasciculatus_S2_contig97.17704.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1A7H5_PIG)

HSP 1 Score: 356 bits (914), Expect = 2.280e-123
Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPV 573
            MFTGA KIVKPEGQEADEFEQ VAQELFNLEMSAADIK+EIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQG RPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCK+DGSK+LKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFP+
Sbjct:    1 MFTGAIKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPL 191
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G463_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 2.860e-122
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP 582
            MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKA+IRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP
Sbjct:  519 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKADIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP 712
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE0_9STRA)

HSP 1 Score: 307 bits (787), Expect = 1.240e-103
Identity = 155/192 (80.73%), Postives = 176/192 (91.67%), Query Frame = 1 
Query:    4 FTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            FTGA KIVKP GQE D+FE+ VAQEL+NLEMSAA++KAE+RDLYIT AK+V+VGGGKKAIII VPY  LR++HKIQ RLVRELEKKFSGRHVV+IA RTILGKSY RSTKT+G RPRSRTLT VQ+ +LEDLV+PTEIVGKRT+CK+DGSK+LKV LDPKDQVNVETKLDTFS VYKK+TNKDVVF+FP+QE
Sbjct:   25 FTGAKKIVKPAGQEIDDFEKSVAQELYNLEMSAAELKAELRDLYITAAKEVEVGGGKKAIIIVVPYVKLRAFHKIQLRLVRELEKKFSGRHVVVIAQRTILGKSYTRSTKTKGPRPRSRTLTHVQEQILEDLVYPTEIVGKRTKCKLDGSKILKVLLDPKDQVNVETKLDTFSFVYKKLTNKDVVFQFPIQE 216
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B1_9STRA)

HSP 1 Score: 305 bits (780), Expect = 5.870e-103
Identity = 153/186 (82.26%), Postives = 176/186 (94.62%), Query Frame = 1 
Query:   22 IVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            IVKPEGQ ADEFEQ VAQEL+NL+MSAA+IKA+++DLYIT AKQV++ GGKKAII+FVPYRLLR++HKIQ RLV ELEKKFSGRHVVIIA RTILGK++AR++KT+G RPRSRTLTAVQDA+LEDLV+PTEIVGKRTRC++DG+KLLKV LDPKDQVNVETKLDTFS VYKK+TNK+VVFEFPVQE
Sbjct:    6 IVKPEGQAADEFEQTVAQELYNLQMSAAEIKADLKDLYITSAKQVELAGGKKAIILFVPYRLLRAFHKIQARLVPELEKKFSGRHVVIIAQRTILGKNFARNSKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCRVDGTKLLKVHLDPKDQVNVETKLDTFSYVYKKLTNKEVVFEFPVQE 191
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NXM7_HETAK)

HSP 1 Score: 305 bits (780), Expect = 1.550e-102
Identity = 155/193 (80.31%), Postives = 174/193 (90.16%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            M  G+ KIVKP GQE DEFE QVAQELFNLEMSA +IKA++RDLYIT AK+VDVG GKKAII+ VPY+LLR +++IQ RLVRELEKKFSGRHVVIIA RTILGKSYARSTKT+G+RPRSRTLTAVQD++LEDLV+PTEIVGKRTRC + G KLLKV LDPKDQVNVETKLDTF+ VYKK+TNKDV F+FPVQE
Sbjct:   26 MSLGSKKIVKPPGQEPDEFEAQVAQELFNLEMSAVEIKADLRDLYITAAKEVDVGPGKKAIIVVVPYKLLRKFNRIQIRLVRELEKKFSGRHVVIIAQRTILGKSYARSTKTKGLRPRSRTLTAVQDSILEDLVYPTEIVGKRTRCAVSGEKLLKVYLDPKDQVNVETKLDTFAYVYKKLTNKDVSFQFPVQE 218
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6D5_PYTIN)

HSP 1 Score: 295 bits (754), Expect = 5.910e-99
Identity = 148/193 (76.68%), Postives = 171/193 (88.60%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            MFTGA KI KPEGQ ADEFEQQVAQELFNLE SAA++K E++DLYIT AKQVDV  G+KAI+IFVPYRL ++++KIQ RL RELEKKFSGRHVV I  RTILGK +AR+ K  G RPRSRTLTAVQ+A+L+D+V+PTEIVGKRTR ++DGSKLLKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPV +
Sbjct:    1 MFTGAAKIKKPEGQTADEFEQQVAQELFNLEASAAELKNELKDLYITAAKQVDVASGRKAIVIFVPYRLHKAFNKIQARLTRELEKKFSGRHVVFITQRTILGKGFARANKATGPRPRSRTLTAVQEAILDDIVYPTEIVGKRTRVRLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBL9_9STRA)

HSP 1 Score: 295 bits (754), Expect = 5.910e-99
Identity = 148/193 (76.68%), Postives = 173/193 (89.64%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            MFTG +KIVKPEGQ  DEFEQQVAQEL+NLE+SAA+IK +++DLYIT AKQVD+  G+KAI+IFVP+RL  S+ KIQ RLVRELEKKFSGRHV+IIA RTILGK +AR+ KT G RPRSRTLTAVQ+A+L+DLV+PTEIVGKRTR ++D SKLLKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPV +
Sbjct:    1 MFTGRSKIVKPEGQTPDEFEQQVAQELYNLELSAAEIKNDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVIIIAQRTILGKGFARANKTSGPRPRSRTLTAVQEAILDDLVYPTEIVGKRTRVRLDSSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3G9W8_PHYRM)

HSP 1 Score: 290 bits (743), Expect = 2.430e-97
Identity = 148/189 (78.31%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:   13 ATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            A+KIVKPEGQ ADEFE QVAQELFNLE SAA+IK +++DLYIT AKQVD+  G+KAI+IFVP+RL  S+ KIQ RLVRELEKKFSGRHVVIIA RTILGK Y+R+    G RPRSRTLT VQ+ +L+DLVFPTEIVGKRTRC++DGSKLLKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPVQE
Sbjct:    2 ASKIVKPEGQTADEFELQVAQELFNLEQSAAEIKTDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVFPTEIVGKRTRCRLDGSKLLKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQE 190
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3XAM7_GLOUD)

HSP 1 Score: 286 bits (732), Expect = 1.190e-95
Identity = 147/189 (77.78%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:   13 ATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            + KIVKPEGQ ADEFE QVAQEL NL+ SAA+IK +++DLYIT AKQVDV  G+KAI+IFVPYRL  ++ KIQ RLVRELEKKFSGRHVVIIA RTILGK Y+RS KT G RPRSRTL AVQ+A+L+DLV+PTEIVGKRTR ++DGSKLLKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPVQ+
Sbjct:    2 SAKIVKPEGQTADEFELQVAQELANLQQSAAEIKNDLKDLYITAAKQVDVASGRKAIVIFVPYRLHSAFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRSNKTNGPRPRSRTLVAVQEAILDDLVYPTEIVGKRTRVRLDGSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQQ 190
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Match: 40S (ribosomal protein S7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C777_9STRA)

HSP 1 Score: 285 bits (730), Expect = 3.040e-95
Identity = 147/196 (75.00%), Postives = 171/196 (87.24%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAKQVDVG---GGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            MFTG  KIVKPEGQE+ EFE  VAQELFNLEMSAA+IK+E+RDLYIT AK+V+VG    GK+AIIIFVP++LL+ +HKIQ RLVRELEKKFSG+HV I+A RTILGKSY+RSTKT+G RPRSRTLTAVQDA+LEDLVFPTEIVGKRTRCK+DG+K L V LD KD VNVETKL+TF+ VYK +TNK+V F FP ++
Sbjct:    1 MFTGFKKIVKPEGQESTEFENTVAQELFNLEMSAAEIKSELRDLYITAAKEVNVGPASAGKQAIIIFVPFKLLKQFHKIQARLVRELEKKFSGKHVTIVAQRTILGKSYSRSTKTKGPRPRSRTLTAVQDAILEDLVFPTEIVGKRTRCKLDGTKQLNVFLDAKDIVNVETKLETFADVYKHLTNKEVEFAFPTEQ 196
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig97.17704.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
40S2.280e-12396.34ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=9823... [more]
Uncharacterized2.860e-12299.48protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
40S1.240e-10380.73ribosomal protein S7 n=1 Tax=Fibrocapsa japonica T... [more]
40S5.870e-10382.26ribosomal protein S7 n=1 Tax=Tribonema minus TaxID... [more]
40S1.550e-10280.31ribosomal protein S7 n=1 Tax=Heterosigma akashiwo ... [more]
40S5.910e-9976.68ribosomal protein S7 n=1 Tax=Pythium insidiosum Ta... [more]
40S5.910e-9976.68ribosomal protein S7 n=2 Tax=Nothophytophthora sp.... [more]
40S2.430e-9778.31ribosomal protein S7 n=21 Tax=Peronosporaceae TaxI... [more]
40S1.190e-9577.78ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=4782... [more]
40S3.040e-9575.00ribosomal protein S7 n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig97contigE_fasciculatus_S2_contig97:35787..40855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score374.0
Seed ortholog evalue4.2e-101
Seed eggNOG ortholog2880.D7G463
Preferred nameRPS7
Model size684
KEGG koko:K02993,ko:K11592
KEGG Pathwayko03010,ko05206,map03010,map05206
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0014020,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016071,GO:0016072,GO:0016331,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0021915,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030097,GO:0030154,GO:0030162,GO:0030234,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031647,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035148,GO:0035239,GO:0035295,GO:0042176,GO:0042177,GO:0042254,GO:0042274,GO:0042886,GO:0042981,GO:0043009,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045861,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051726,GO:0055105,GO:0055106,GO:0060255,GO:0060429,GO:0060562,GO:0060606,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072175,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1902253,GO:1902255,GO:1902531,GO:1902533,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2001233,GO:2001235,GO:2001242,GO:2001244
Exons6
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsKOG3320@1,KOG3320@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_001435.1
Cds size585
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig97.17704.1prot_E_fasciculatus_S2_contig97.17704.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig97 35787..40756 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842615.4031754-CDS-E_fasciculatus_S2_contig97:35786..358791696842615.4031754-CDS-E_fasciculatus_S2_contig97:35786..35879Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig97 35787..35879 +
1696842615.418005-CDS-E_fasciculatus_S2_contig97:37902..379621696842615.418005-CDS-E_fasciculatus_S2_contig97:37902..37962Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig97 37903..37962 +
1696842615.4281108-CDS-E_fasciculatus_S2_contig97:38474..385871696842615.4281108-CDS-E_fasciculatus_S2_contig97:38474..38587Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig97 38475..38587 +
1696842615.4403408-CDS-E_fasciculatus_S2_contig97:39321..394481696842615.4403408-CDS-E_fasciculatus_S2_contig97:39321..39448Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig97 39322..39448 +
1696842615.4493005-CDS-E_fasciculatus_S2_contig97:40227..403231696842615.4493005-CDS-E_fasciculatus_S2_contig97:40227..40323Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig97 40228..40323 +
1696842615.4580367-CDS-E_fasciculatus_S2_contig97:40660..407561696842615.4580367-CDS-E_fasciculatus_S2_contig97:40660..40756Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig97 40661..40756 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842615.466527-UTR-E_fasciculatus_S2_contig97:40756..408551696842615.466527-UTR-E_fasciculatus_S2_contig97:40756..40855Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig97 40757..40855 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig97.17704.1

>prot_E_fasciculatus_S2_contig97.17704.1 ID=prot_E_fasciculatus_S2_contig97.17704.1|Name=mRNA_E_fasciculatus_S2_contig97.17704.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=195bp
MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKAEIRDLYITGAK
QVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRT
ILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDG
SKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP*
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mRNA from alignment at E_fasciculatus_S2_contig97:35787..40855+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig97.17704.1 ID=mRNA_E_fasciculatus_S2_contig97.17704.1|Name=mRNA_E_fasciculatus_S2_contig97.17704.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5069bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig97:35787..40855+ (Ectocarpus fasciculatus EfasUO2)
ATGTTCACGGGAGCGACTAAGATTGTTAAGCCTGAGGGCCAGGAGGCGGA
TGAGTTCGAGCAGCAGGTAGCTCAGGAGCTCTTCAACCTCGAGGTAAGAG
AGGGACGAGATTTGCCCCTTTGTGGTACATACGCAGTCCTGCGACTGCGT
TTTTTGGCGTGGGATACTCCACCTGGAGTTTGGCTGTCGCCGCTGGCTGG
CTACACTGCCTACACTGCCTACACTGAGCGTCCGGCTCTGCCTGTGCACC
GCTTCAGTAGTCACGTACGTGAACGTCATCACACTCAAACTTGCGAAGGT
TTGCGCCGTGCTTTTCCAAAGCAGGTTCAATTGTGGACGATTTATGCTGC
ACCGGGTTCTTACATATTGCCTAGATGATCGGGCTTGTCGTTTTATCGTC
GTACATATCATGAGAACTCTCCTGCCCCCCTCTACTACCAAGATCAGTGA
TGTGTGTGCTGTACCTCGCGCTTGCTGTTGGGGATCTCTGAATCATCCAC
CCGTTAGATGGTTCGCCACAGCAGTAAAGTTCGATGGGGTCTGCCAGTGT
TGGATGTTCTCCAATCATGAAATATAGGTGTAGTGCGAGTATTAGTATTT
GGACGGGAGTGGAGCGCCTCGCAAAAGCAGCCATCATGATCATCATCATC
ATCCAGCAGCGACGAGACGAGACGAGACGAGCGTGGTCCTTTTTCCAAGA
TAGCCAATAGGCGTGTTCAGACTAACTAACACACGTCCCAGGAGCGACCA
CTAATGGATCTCTGACCGCATGACAAAAGTCGCGGCGGCAGGCGGTGTAC
AAGACAAAGTGGTGCCTAGCCGTTTTTCTCTTGGGTTGGATGGAACATGT
CGGGGTAGGGTTTGGTACAGATGTCCCCAGCAATCCTTGTTTGCCCGCAC
TCTCTCTTGACAGCAGTTCATCTTCCAACCTAGCCGCTACACTGCTTTCC
TGTTTAAATTAAAGAGCGTTGGTCTCGCTGGAAATGTTAATGTTGCAACT
CATCGCCAACTGCTGTGCACGTTGGTAGCGGAGCCATGCGCGGTGGATGG
TGGATTGCGGAGCGAGTGGCCCGTTGCAATTCTAAGGCTTGGTCTCTTGG
AAGTTTAAGTTTTGCCACGCGCACGAAGTATGGTCTGAATACACGCAGAA
CAGGCCGAACCTCCGACGATAGCGACCAGCGCAACAGCAGTGATTGCCAC
AGAGGGACAGAGGGGTGGTGGCCCACGAAGGGGTCAGGCCATTTAAAGTG
CACGTCCGCGATGAGGTTGTTTCGCATACGGCTTTGTTGGGACGCACATT
GAAATGCCGTGGCAAGGTAGCAGAAAAAGGCACAGGCAGCTCACAAACTC
GTATTAATGTTCCTTTCCATCGCACTCTTGGCATGGGGCTGCAAACCCTG
GTTGCTGGTGTCATGTCTAAGATTCGAAAGTGCCTGGACTTCTTTTGTAG
ATTCCGGTCGGGACAGAGAGGAATGGCCTCGCAAGGCTTGGAAATCCCCA
CCCCACCCCTCTTTTTTTCTCGTCGTCAGCATTCAAGAAACTTAAACTTA
CTCGTTTGGGCCACGCCTTCCGATTACATCGGAAAAACGAACCGCTCCTC
ACGGTCGGATTTCAATCCATCCAAGTGGTTGTGCTTCCGCTCGAATGCCG
ATTCTGAATACCATCCCCTGCATACCGCTGTAACAGCTTGACATGGAGTC
TTCAATCGGACTTGTCGTACTAGGCATCCATTGCACTAGTACTGCTGTGT
GGGCTCGGTCCGTGCTAAGACGAGTGGGGGGTTGGGCGAAATCAGAGTTG
GTACAAGGGGTACACCTACACCGACATTCACGTTCAAGAGAATGAATGAC
ACCAACCATCGTTTCACGAACACGAGACACGAGAGTCGGGAACCCAGCCA
GAACGTCGTCTATCAAGCATTCGCATTAGCATTAGCATTCACTTTTTTCG
TGGACTCGTTGTCGTGGGGATTCAAAGCGGGAGCATCCCCTCAGTGCACT
GTCGACGTTCTACACAAATCCATGGTATAGCTTCTAACCTCCTCATAAGC
GGTGATGGTTGCCTGCAGAGCTGACGGTTTCCCATTTTCATGCTAACGTG
CTTGCCGTTCTACTAGATGTCCGCCGCGGACATCAAGGCGGAAATCCGCG
ACCTCTACATCACGGGCGCGAAGCAGGTGCGTTTCAAACGGGAGTGTGGA
TGGGACAAAGCCTTCGGTAGGACGTTGTCGTTGAGCTTCCAGATCCGCCT
CTCCGTCACTGAGGGCTGTTCGTTGGACGAATTCAAGCTAAACGCCGTTG
AGCACCGCGGGGTAGACTTTTGGAGCACTCGCCGCTGAGGAGCATGACAG
AGGTCACGATGCATTGCTCCCTGGGGTTACCTGCGGGGGAGGCCGGGGCG
GGATAGTTAACTCTCTGTGCAGGGCATGGTAACTCGCGGTGTCCTTCTTG
AAAACTTGAGGATGTGACGGTGAATTTCGAGTATGGGGTCAACCTTCAAG
GTGGTTTTGGCCTAACGCCCGGCGTAGTTTAGCTTGGTTGACTGCCCACC
GACGGGAGTATATATCTATCCCTTCTGGTAGCACATTCTACGCCCCCCAT
CCACGATGTCTAGAATGCATCAGTTTTGCAACGCACGTGCCTGGGGGCTT
CTTCACCTGAACCTGGAACCCGTCTGTCATCACTCCAGGTGGATGTGGGG
GGTGGCAAGAAGGCCATCATCATCTTCGTACCGTACCGTTTGCTGAGGTC
TTACCACAAGATCCAGACGCGCTTGGTGCGAGAGCTGGAGAAGAAGTTCA
GGTGACTTGCCAGAGGGAGACAACGTGCTGTGTACTGCTTTCCCGCTGTG
GTGATTGTGGTTAACCAGCCTGGGGCGAATAGCTGCTAGCGTAGCGCTTT
GCACGGCATCTCGACATTTTTGGTGACGGTCTGCCATGGTTGTAGACTGC
TGCACCATCATCTGTGGTATTGTATTTAACGAAACCGTGGTTCTCGTGCT
GGGGTGTGACGTGCTTGCTGATTGGGGTTGTTCAAAAGGAAGAGTCACCA
GTCTTTCGCTCCTCGTGACTGTGGTAGTTGTGGTAGTCACAGAATACCTT
TCTGCGTCTTGTGGGACTTTCCAGCGCCTGCACCAATCAGTGAGTGGCCT
ACACAACACCGCCTTTTCCAACTTGCAGACCTGTGCTACCTTGAAAATAT
GAAATGTGTTTGCAGATACAGCTCTCTGCGTCCGCACGTATGTCTGTTCA
AGATGATCGGATCGGTTTCGTGGCGCCGTAACGTGTGGTATAGTACATGT
TGGATGTTGGATGTTGGCCATTTTCAGTGGTGGCACTCGCTTGTTTCGAA
CTCGGAGTGTTTTTCTTGAGTTTCAGCTCCTTGTGCTTAATGAAGCCTAA
ATAATATGGCACGGCTTTAGCAACGGTCGATGGAATGCCATAAACAGCAT
CATGTCGCGGTTAGTTGCCAGAAATGGCCACTCTGCCGGAGGTGCCTGCT
GACGAGAGCCCTGTTTTGTACCCTTCCCTCTGCAGCGGCCGCCACGTGGT
GATCATCGCCACCCGCACCATCCTCGGCAAGAGCTACGCTCGCTCAACCA
AGACACAGGGAATCCGCCCACGCTCGCGCACCCTCACCGCCGTCCAGGAC
GCCATGCTCGAGGTGATGAGTGTTGCATGTGTGTGTTGCTGCGCCATGCA
GTGATTCGCACTACTTTTACAGCTGCTTCCCGAACGACACCAGACGCACT
TTGTTTTTTTTATGGTGGGTAGGTTCGGCAAGATTCGTCGAGTGGCGGTT
TTGACTTGTTGGGAAGGGCGACACCGACTTCACTAGCACACAGTATTGGG
AGTGCCTGCTTCTTGTTGAAGCTGGCTGCACGTGTGTGGGCGCACCTCCC
GCCATCACTGACGAGCATCTGTTGCACTGCTGTAGCCTCGCGATGGTTCA
AATACACATGACGGCAGTTGTTCGACTAAGAACTTGGAAGGCTGGATGGA
AGACAGCAATGGTCAAGATAGGATGGGTTGGGGGCGTTGATAGCATGAAT
GTTACAGAGATATGGTCAAACTGCCGTGTACAGGCATCTTGTTGAGCCAC
GAAAGATGGGCATCTGCGGTTTGCTTCAGGTGGCTCCAGTTGACCACTGG
TGTTGTTATGTGTGGCCGAACACTTACGCGAACTGCGTGTAAGCTCCACG
CTAGCCATGGACTGCTTTTGGACGAACGACGGAGTTCTGTTTGCTGTCGG
GGTACGCGTGTTTCGTGTCAAGAGGCTTAGTCCTTTCGTTCATTTGGAAC
CTGTTTTGGGAATTTGTCTTTCGCATGCAGACGTGACCATGTTCTTCGCA
TATATCTCCCTTGCCACAAGCTCTCGGAAGCGTTTCTCCAAGCTGATTTC
GCCACCGACGCTTGCGATACGCGTCCCTCATGACATGACAGGACCTCGTG
TTCCCCACCGAGATCGTCGGCAAGCGCACACGGTGCAAGATCGATGGCTC
CAAGCTCCTCAAGGTCCAGCTCGACCCTAAGGACCAGGTAAGAAAATGTT
TGGCCTCTCGATACATACAGCAGACGGCAACCCCCCCCGAATGGAGGAAT
TTTACCCTTCATCACTACATGTATGCCCGCGTTGAGCCAAACCATCCTTT
TTGTGTTGTTCGGGCGGGGGGCGGGTATGTGAAGTTCTCGATCTCGCTCT
GATTGCCCAAAAGGGCAATTCCTTGTTTGTGGAAGTTGTAGACACCGGTG
GCACGTGGGTTGTGTTAAATATTATCGTTCTTTGCCATAAATCCCCGAGT
TTCTGATGGGACTTTTCCGTCGGACTGACGCGTTTTTCTCAATGTGCACA
TGTTTCCTGTGAACCCAACCTTAGGTGAACGTGGAGACCAAGCTCGACAC
CTTCTCTTCGGTGTACAAGAAGATCACCAACAAGGACGTTGTGTTCGAGT
TCCCCGTGCAGGAGCCGTAGACAGAGAAACAAAGCACATCGGCATGATGC
TGGTGTCCTGCCAGGTTGTGGCGTTGGTTCCCTAAGAAGTCATTGAGCGT
GTTTTTTGTATGCCGATGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig97:35787..40855+

>mRNA_E_fasciculatus_S2_contig97.17704.1 ID=mRNA_E_fasciculatus_S2_contig97.17704.1|Name=mRNA_E_fasciculatus_S2_contig97.17704.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=585bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig97:35787..40855+ (Ectocarpus fasciculatus EfasUO2)
ATGTTCACGGGAGCGACTAAGATTGTTAAGCCTGAGGGCCAGGAGGCGGA
TGAGTTCGAGCAGCAGGTAGCTCAGGAGCTCTTCAACCTCGAGATGTCCG
CCGCGGACATCAAGGCGGAAATCCGCGACCTCTACATCACGGGCGCGAAG
CAGGTGGATGTGGGGGGTGGCAAGAAGGCCATCATCATCTTCGTACCGTA
CCGTTTGCTGAGGTCTTACCACAAGATCCAGACGCGCTTGGTGCGAGAGC
TGGAGAAGAAGTTCAGCGGCCGCCACGTGGTGATCATCGCCACCCGCACC
ATCCTCGGCAAGAGCTACGCTCGCTCAACCAAGACACAGGGAATCCGCCC
ACGCTCGCGCACCCTCACCGCCGTCCAGGACGCCATGCTCGAGGACCTCG
TGTTCCCCACCGAGATCGTCGGCAAGCGCACACGGTGCAAGATCGATGGC
TCCAAGCTCCTCAAGGTCCAGCTCGACCCTAAGGACCAGGTGAACGTGGA
GACCAAGCTCGACACCTTCTCTTCGGTGTACAAGAAGATCACCAACAAGG
ACGTTGTGTTCGAGTTCCCCGTGCAGGAGCCGTAG
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