mRNA_E_fasciculatus_S2_contig9668.17673.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: PBPe (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS3_ECTSI) HSP 1 Score: 634 bits (1636), Expect = 1.300e-218 Identity = 320/345 (92.75%), Postives = 334/345 (96.81%), Query Frame = 1
Query: 22 RSAGLWQDGAFIREAALGTEIVGVTGQVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAK-NELLTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 1053
+SAGLWQDGAFIREAALGTEIVGVTG VAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKP+TFVDSNGT+ATFE ISPYQKNQTFPAGSDVYPFDRPTL+ QHF VITEEAA+PFAVITGREN+TGDYTGIALDL+EVLSGRLGFTYN+SVANAS+STDEVIGYVSNGTYDMVASWV INE RLD+VSFSYPFMATGLSFVYRPEVL +VNWWKMFQPFE PLW+LII TTVVMFALLWLFDGAK NEL TDGVP+ATGSKRRLSSGMAMSSY+TGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL
Sbjct: 360 KSAGLWQDGAFIREAALGTEIVGVTGPVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPETFVDSNGTLATFENISPYQKNQTFPAGSDVYPFDRPTLSRQHFKVITEEAAVPFAVITGRENQTGDYTGIALDLLEVLSGRLGFTYNISVANASISTDEVIGYVSNGTYDMVASWVTINERRLDTVSFSYPFMATGLSFVYRPEVLDKVNWWKMFQPFERPLWMLIIGTTVVMFALLWLFDGAKKNELFTDGVPTATGSKRRLSSGMAMSSYVTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 704
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: PBPe (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGS4_ECTSI) HSP 1 Score: 598 bits (1543), Expect = 2.120e-206 Identity = 299/344 (86.92%), Postives = 320/344 (93.02%), Query Frame = 1
Query: 22 RSAGLWQDGAFIREAALGTEIVGVTGQVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 1053
++AGLWQDGAFIREAALGTEIVGVTG VAFRES S VTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATF TMLW+P+TFVD+NGT+ATFEKISP QKNQTFP+G DVYPFDRPTL+ QHF VITEEA +PFA IT REN+T +YTGIALDL+EVLSGRLGFTYN+SVAN+SVSTDEVIGYVSNGTYDMVASWV I+E RLD+VSFSYPFMATGLSFVYRPEVL +VNWWKMFQPFE LW+LI TTVVM ALLWLFDGAKNE+ TDGVP+ATGSKRRLSSGMAMSSY+TGALLMGQM H PYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL
Sbjct: 305 KAAGLWQDGAFIREAALGTEIVGVTGPVAFRESASTVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFEATMLWRPETFVDTNGTLATFEKISPNQKNQTFPSGGDVYPFDRPTLSRQHFEVITEEATVPFAFITRRENQTEEYTGIALDLLEVLSGRLGFTYNISVANSSVSTDEVIGYVSNGTYDMVASWVTISERRLDTVSFSYPFMATGLSFVYRPEVLDKVNWWKMFQPFERQLWILITGTTVVMVALLWLFDGAKNEIFTDGVPTATGSKRRLSSGMAMSSYVTGALLMGQMVHAPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 648
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B0_ECTSI) HSP 1 Score: 252 bits (643), Expect = 4.040e-75 Identity = 143/353 (40.51%), Postives = 202/353 (57.22%), Query Frame = 1
Query: 10 SCPFRSAGLWQDGAFIREAALGTE--IVGVTGQVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRR-LSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALVR 1059
SCPF G W DGA +R++ L +VG TG + G G R + FCA+NL+ A+ GA F T +G F+ ISP+Q+ QTFPAG+ YP DRP L G+H +V+ A PF + G + D+TGI + ++ L+ +GFTY++ +T E I V NG+ DM SW+ I R + VSF+YP+ G++FVY P + VN+WK F PFE LW++++V+ VV LLWLF+GAKN + G G + R ++ G++ S Y+T +L+M Q+ H+P T+E Y+LT GW+F F+L AS+TAELASFL A K E VR
Sbjct: 249 SCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMS---------VGEDDDG-RDADTVTFCAVNLKPDATHGARFEVISTLDGATLESEDG--EGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDVVMRRDAPPFVFVDGDGSSIDDFTGITPEFLKQLADVVGFTYSLRAPPEGTTTPETIEMVRNGSADMTGSWITITSERAEYVSFTYPYFDLGIAFVYLPTIDEGVNFWKAFAPFEASLWLMLLVSLVVTVFLLWLFEGAKNAQFSRG---GWGRRHRTVTRGISRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASFLTASKLETTVR 586
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG95_9PHAE) HSP 1 Score: 239 bits (610), Expect = 7.660e-71 Identity = 117/132 (88.64%), Postives = 125/132 (94.70%), Query Frame = 1
Query: 658 MATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 1053
MATGLSFVYRPEV+ +VNWWKMF+PFE PLW+LI+ TTVVMF LLWLFDGAKNEL D VP+ATGSKRRLSSGMAMSSY+TGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFL+AEKEEAL
Sbjct: 1 MATGLSFVYRPEVVDKVNWWKMFEPFERPLWMLIVGTTVVMFTLLWLFDGAKNELFMDKVPTATGSKRRLSSGMAMSSYVTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLSAEKEEAL 132
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: PBPe (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES6_9PHAE) HSP 1 Score: 234 bits (598), Expect = 1.440e-69 Identity = 145/397 (36.52%), Postives = 205/397 (51.64%), Query Frame = 1
Query: 1 IRSSCPFRSAGLWQDGAFIREAALGTE--IVGVTGQVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEA--------AIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNE------------------------------LLTDGVPSATGSKRRLS-----SGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALV 1056
+ SCPF G W DGA +R++ L +VG TG + G G R + FCA+NL+ A+ GA F T +G F+ ISP+Q+ QTFPAG+ YP DRP L G+H +V T A PF + G + D+TGI + +E L+ +GFTY++ +T + I V NG+ DM SW+ I R + VSF+YP+ G++FVY P + VN+WK F PFE LW++++V+ VV LLWLF+GAKN+ +L G S+ G + R +G++ S Y+T +L+M Q+ H+P T+E Y+LT GW+F F+L AS+TAELASFL A K E V
Sbjct: 20 VLDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMS---------VGEDDDG-RDVDTVTFCAVNLKPDATHGARFEVISTLDGATLDSEDG--EGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDVRTPPGGGVVMRRDAPPFVFVDGDGSSIDDFTGITPEFLEKLADVVGFTYSLRAPPEGTTTPDTIEMVRNGSADMTGSWITITSERAEYVSFTYPYFDLGIAFVYLPTIDEGVNFWKAFAPFEASLWLMLLVSLVVTVVLLWLFEGAKNDQFSRGGWGRRHRTVTRVRQGGDGWGTLMFRMLRIGHASSRGLRGRTGVLHAIAGISRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASFLTASKLETTV 404
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Glutamate (receptor ionotropic, delta-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXE4_PORPP) HSP 1 Score: 119 bits (297), Expect = 1.200e-25 Identity = 87/259 (33.59%), Postives = 125/259 (48.26%), Query Frame = 1
Query: 295 FEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYN-VSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYR-PEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNEL-LTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALVRR 1062
F +ISP + Q FP + YPFDR G+ V A PF +I EN GI ++ L+ RLGFTY V NA+V+ +++ V G D+ SW I+ RL+ V F+ P+ L F R E + W PF +W+ I + ++ + +G TD + S S Y++ ALL+ Q++HEP TV Y+LT+GW+ FI+ AS+ AELASFL E+L R
Sbjct: 477 FSRISP-RFPQRFPQLAQNYPFDRAAATGRTLRVAVNHAP-PFNIIQ-YENGGFLVLGINGQVIIGLARRLGFTYEFVEAYNATVN--DLVDMVDKGEADLAMSWSTISASRLEKVDFTTPYHDVTLCFAIRIGGTDLEEDIWGFINPFSWQIWLAIFLFLFLVTTCFFALEGVHGNFDFTD---------KNYFSMYGRSCYISFALLLNQLSHEPQTVSGYVLTTGWLIFAFIVTASYVAELASFLVGSDVESLFSR 721
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Glutamate (receptor ionotropic, kainate 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHV8_PORPP) HSP 1 Score: 97.8 bits (242), Expect = 1.290e-18 Identity = 76/224 (33.93%), Postives = 107/224 (47.77%), Query Frame = 1
Query: 379 GQHFNVITEEAAIPFAVITGRENKTGD-YTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYV--SNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEK 1041
G H+++I A PF I + + Y+G ++DL+E+LS L FTY + A V + VI V N T +M S I RL V F+ PF GL V+ P ++ + W++F PFE +W LI+V VV+ LF+ N+ G P + +S Y + Q P T E +L G FIL A++TAELASFL A K
Sbjct: 132 GTHYDIIVGRAP-PFVFIDPDTSLGIERYSGYSVDLIEILSVMLNFTYTIQ-GEAGVGSTAVISQVVDENNTINMAISAFTITSARLAIVDFTQPFFLLGLRIVHNPRPDSQ-DLWRIFVPFEPLVWGLIVVAFVVILLSYALFEHGLNDAEFRGRPIKD---------VFLSLYYVFQTAVQQSTPLPETTEGRLLMIGSTAFFFILAATYTAELASFLTANK 343
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Hypothetical (protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK83_9RHOD) HSP 1 Score: 92.0 bits (227), Expect = 1.060e-16 Identity = 66/198 (33.33%), Postives = 103/198 (52.02%), Query Frame = 1
Query: 460 YTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGT--YDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSS--GMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEK 1041
Y+G ++DLVE+++ RLGF Y++ A V + +I V NGT Y+M S I RL V F+ PF GL V+ P+ L E + +++F PFE +W I ++ L F+ + N+ S+ R +S + +S Y T ++ Q++ + T E + G M FI+ A++TAELASFL K
Sbjct: 128 YSGYSIDLVELIAKRLGFEYDIE-GEAGVGSSAIIAAVQNGTNGYNMATSAFTITSSRLAVVRFTQPFFDLGLRIVHEPKPL-EPSVFRIFIPFEGAVWGCIAGCFALIALCLAFFEASYND-----------SEFRSNSINNLFLSMYYTFQTVVQQVSMQAETTEGRLTLMGAMAFFFIIAATYTAELASFLTLSK 312
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Hypothetical (protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A815JV17_9BILA) HSP 1 Score: 87.0 bits (214), Expect = 6.520e-15 Identity = 69/253 (27.27%), Postives = 120/253 (47.43%), Query Frame = 1
Query: 316 QKNQTFPAGSDVYP-FDRPTLNGQHFNVITEEAAIPFAVITGRENKTGD----YTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSS-YLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALV 1056
+KN G+ + P +R L G + T ++ PF ++ + G YTG A+DL+++L +LGF+ + + + + +E + VS G YD++ + V + R + V FS P L V R ++ +PF LWVL++ T + L++L + KNE L + R ++S + MS Y G ++ + + T +LT+G I+ AS+TA LAS L K + ++
Sbjct: 218 KKNSIIWPGNSLTPSVNRALLRGVSLRIGTADSP-PFTLVQNVTDDNGQSTIQYTGYAIDLLQLLMDQLGFSATLLLKPSDQTYNEFVQGVSEGVYDIIIADVTVTSPRREIVGFSSPIYDNSLRTVVRQANDPGIDLLAFLKPFSRRLWVLVLGTCIYASILIFLIERRKNEDLQN---------RSITSQLIMSIWYCFGNMVGYGVEFDARTAGGRLLTAGLYILSLIIVASYTANLASDLTIAKSQFVI 460
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Hypothetical (protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A814V8A6_9BILA) HSP 1 Score: 85.9 bits (211), Expect = 8.490e-15 Identity = 67/247 (27.13%), Postives = 116/247 (46.96%), Query Frame = 1
Query: 331 FPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGD----YTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSS-YLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALV 1056
+P S +R L G + T ++ PF ++ + G YTG A+DL+++L +LGF+ + + + + +E + VS G YD++ + V + R + V FS P L V R ++ +PF LWVL++ T + L++L + KNE L + R ++S + MS Y G ++ + + T +LT+G I+ AS+TA LAS L K + ++
Sbjct: 7 WPGNSLTPSVNRALLRGVSLRIGTADSP-PFTLVQNVTDDNGQSTIQYTGYAIDLLQLLMDQLGFSATLLLKPSDQTYNEFVQGVSEGVYDIIIADVTVTSPRREIVGFSSPIYDNSLRTVVRQANDPGIDLLAFLKPFSRRLWVLVLGTCIYASILIFLIERRKNEDLQN---------RSITSQLIMSIWYCFGNMVGYGVEFDARTAGGRLLTAGLYILSLIIVASYTANLASDLTIAKSQFVI 243 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9668.17673.1 >prot_E_fasciculatus_S2_contig9668.17673.1 ID=prot_E_fasciculatus_S2_contig9668.17673.1|Name=mRNA_E_fasciculatus_S2_contig9668.17673.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=356bp IRSSCPFRSAGLWQDGAFIREAALGTEIVGVTGQVAFRESTSAVTSGAGTback to top mRNA from alignment at E_fasciculatus_S2_contig9668:193..5409+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9668.17673.1 ID=mRNA_E_fasciculatus_S2_contig9668.17673.1|Name=mRNA_E_fasciculatus_S2_contig9668.17673.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5217bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9668:193..5409+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9668:193..5409+ >mRNA_E_fasciculatus_S2_contig9668.17673.1 ID=mRNA_E_fasciculatus_S2_contig9668.17673.1|Name=mRNA_E_fasciculatus_S2_contig9668.17673.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1068bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9668:193..5409+ (Ectocarpus fasciculatus EfasUO2)back to top |