mRNA_E_fasciculatus_S2_contig9668.17673.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9668.17673.1
Unique NamemRNA_E_fasciculatus_S2_contig9668.17673.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: PBPe (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS3_ECTSI)

HSP 1 Score: 634 bits (1636), Expect = 1.300e-218
Identity = 320/345 (92.75%), Postives = 334/345 (96.81%), Query Frame = 1
Query:   22 RSAGLWQDGAFIREAALGTEIVGVTGQVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAK-NELLTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 1053
            +SAGLWQDGAFIREAALGTEIVGVTG VAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKP+TFVDSNGT+ATFE ISPYQKNQTFPAGSDVYPFDRPTL+ QHF VITEEAA+PFAVITGREN+TGDYTGIALDL+EVLSGRLGFTYN+SVANAS+STDEVIGYVSNGTYDMVASWV INE RLD+VSFSYPFMATGLSFVYRPEVL +VNWWKMFQPFE PLW+LII TTVVMFALLWLFDGAK NEL TDGVP+ATGSKRRLSSGMAMSSY+TGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL
Sbjct:  360 KSAGLWQDGAFIREAALGTEIVGVTGPVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPETFVDSNGTLATFENISPYQKNQTFPAGSDVYPFDRPTLSRQHFKVITEEAAVPFAVITGRENQTGDYTGIALDLLEVLSGRLGFTYNISVANASISTDEVIGYVSNGTYDMVASWVTINERRLDTVSFSYPFMATGLSFVYRPEVLDKVNWWKMFQPFERPLWMLIIGTTVVMFALLWLFDGAKKNELFTDGVPTATGSKRRLSSGMAMSSYVTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 704          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: PBPe (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGS4_ECTSI)

HSP 1 Score: 598 bits (1543), Expect = 2.120e-206
Identity = 299/344 (86.92%), Postives = 320/344 (93.02%), Query Frame = 1
Query:   22 RSAGLWQDGAFIREAALGTEIVGVTGQVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 1053
            ++AGLWQDGAFIREAALGTEIVGVTG VAFRES S VTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATF  TMLW+P+TFVD+NGT+ATFEKISP QKNQTFP+G DVYPFDRPTL+ QHF VITEEA +PFA IT REN+T +YTGIALDL+EVLSGRLGFTYN+SVAN+SVSTDEVIGYVSNGTYDMVASWV I+E RLD+VSFSYPFMATGLSFVYRPEVL +VNWWKMFQPFE  LW+LI  TTVVM ALLWLFDGAKNE+ TDGVP+ATGSKRRLSSGMAMSSY+TGALLMGQM H PYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL
Sbjct:  305 KAAGLWQDGAFIREAALGTEIVGVTGPVAFRESASTVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFEATMLWRPETFVDTNGTLATFEKISPNQKNQTFPSGGDVYPFDRPTLSRQHFEVITEEATVPFAFITRRENQTEEYTGIALDLLEVLSGRLGFTYNISVANSSVSTDEVIGYVSNGTYDMVASWVTISERRLDTVSFSYPFMATGLSFVYRPEVLDKVNWWKMFQPFERQLWILITGTTVVMVALLWLFDGAKNEIFTDGVPTATGSKRRLSSGMAMSSYVTGALLMGQMVHAPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 648          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B0_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 4.040e-75
Identity = 143/353 (40.51%), Postives = 202/353 (57.22%), Query Frame = 1
Query:   10 SCPFRSAGLWQDGAFIREAALGTE--IVGVTGQVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRR-LSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALVR 1059
            SCPF   G W DGA +R++ L     +VG TG +             G    G R  +   FCA+NL+  A+ GA F         T    +G    F+ ISP+Q+ QTFPAG+  YP DRP L G+H +V+    A PF  + G  +   D+TGI  + ++ L+  +GFTY++       +T E I  V NG+ DM  SW+ I   R + VSF+YP+   G++FVY P +   VN+WK F PFE  LW++++V+ VV   LLWLF+GAKN   + G     G + R ++ G++ S Y+T +L+M Q+ H+P T+E Y+LT GW+F  F+L AS+TAELASFL A K E  VR
Sbjct:  249 SCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMS---------VGEDDDG-RDADTVTFCAVNLKPDATHGARFEVISTLDGATLESEDG--EGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDVVMRRDAPPFVFVDGDGSSIDDFTGITPEFLKQLADVVGFTYSLRAPPEGTTTPETIEMVRNGSADMTGSWITITSERAEYVSFTYPYFDLGIAFVYLPTIDEGVNFWKAFAPFEASLWLMLLVSLVVTVFLLWLFEGAKNAQFSRG---GWGRRHRTVTRGISRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASFLTASKLETTVR 586          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG95_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 7.660e-71
Identity = 117/132 (88.64%), Postives = 125/132 (94.70%), Query Frame = 1
Query:  658 MATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEAL 1053
            MATGLSFVYRPEV+ +VNWWKMF+PFE PLW+LI+ TTVVMF LLWLFDGAKNEL  D VP+ATGSKRRLSSGMAMSSY+TGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFL+AEKEEAL
Sbjct:    1 MATGLSFVYRPEVVDKVNWWKMFEPFERPLWMLIVGTTVVMFTLLWLFDGAKNELFMDKVPTATGSKRRLSSGMAMSSYVTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLSAEKEEAL 132          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: PBPe (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES6_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.440e-69
Identity = 145/397 (36.52%), Postives = 205/397 (51.64%), Query Frame = 1
Query:    1 IRSSCPFRSAGLWQDGAFIREAALGTE--IVGVTGQVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEA--------AIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNE------------------------------LLTDGVPSATGSKRRLS-----SGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALV 1056
            +  SCPF   G W DGA +R++ L     +VG TG +             G    G R  +   FCA+NL+  A+ GA F         T    +G    F+ ISP+Q+ QTFPAG+  YP DRP L G+H +V T           A PF  + G  +   D+TGI  + +E L+  +GFTY++       +T + I  V NG+ DM  SW+ I   R + VSF+YP+   G++FVY P +   VN+WK F PFE  LW++++V+ VV   LLWLF+GAKN+                              +L  G  S+ G + R       +G++ S Y+T +L+M Q+ H+P T+E Y+LT GW+F  F+L AS+TAELASFL A K E  V
Sbjct:   20 VLDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMS---------VGEDDDG-RDVDTVTFCAVNLKPDATHGARFEVISTLDGATLDSEDG--EGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDVRTPPGGGVVMRRDAPPFVFVDGDGSSIDDFTGITPEFLEKLADVVGFTYSLRAPPEGTTTPDTIEMVRNGSADMTGSWITITSERAEYVSFTYPYFDLGIAFVYLPTIDEGVNFWKAFAPFEASLWLMLLVSLVVTVVLLWLFEGAKNDQFSRGGWGRRHRTVTRVRQGGDGWGTLMFRMLRIGHASSRGLRGRTGVLHAIAGISRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASFLTASKLETTV 404          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Glutamate (receptor ionotropic, delta-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXE4_PORPP)

HSP 1 Score: 119 bits (297), Expect = 1.200e-25
Identity = 87/259 (33.59%), Postives = 125/259 (48.26%), Query Frame = 1
Query:  295 FEKISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGDYTGIALDLVEVLSGRLGFTYN-VSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYR-PEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNEL-LTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALVRR 1062
            F +ISP +  Q FP  +  YPFDR    G+   V    A  PF +I   EN      GI   ++  L+ RLGFTY  V   NA+V+  +++  V  G  D+  SW  I+  RL+ V F+ P+    L F  R      E + W    PF   +W+ I +   ++    +  +G       TD         +   S    S Y++ ALL+ Q++HEP TV  Y+LT+GW+   FI+ AS+ AELASFL     E+L  R
Sbjct:  477 FSRISP-RFPQRFPQLAQNYPFDRAAATGRTLRVAVNHAP-PFNIIQ-YENGGFLVLGINGQVIIGLARRLGFTYEFVEAYNATVN--DLVDMVDKGEADLAMSWSTISASRLEKVDFTTPYHDVTLCFAIRIGGTDLEEDIWGFINPFSWQIWLAIFLFLFLVTTCFFALEGVHGNFDFTD---------KNYFSMYGRSCYISFALLLNQLSHEPQTVSGYVLTTGWLIFAFIVTASYVAELASFLVGSDVESLFSR 721          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Glutamate (receptor ionotropic, kainate 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHV8_PORPP)

HSP 1 Score: 97.8 bits (242), Expect = 1.290e-18
Identity = 76/224 (33.93%), Postives = 107/224 (47.77%), Query Frame = 1
Query:  379 GQHFNVITEEAAIPFAVITGRENKTGD-YTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYV--SNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEK 1041
            G H+++I   A  PF  I    +   + Y+G ++DL+E+LS  L FTY +    A V +  VI  V   N T +M  S   I   RL  V F+ PF   GL  V+ P   ++ + W++F PFE  +W LI+V  VV+     LF+   N+    G P            + +S Y      + Q    P T E  +L  G     FIL A++TAELASFL A K
Sbjct:  132 GTHYDIIVGRAP-PFVFIDPDTSLGIERYSGYSVDLIEILSVMLNFTYTIQ-GEAGVGSTAVISQVVDENNTINMAISAFTITSARLAIVDFTQPFFLLGLRIVHNPRPDSQ-DLWRIFVPFEPLVWGLIVVAFVVILLSYALFEHGLNDAEFRGRPIKD---------VFLSLYYVFQTAVQQSTPLPETTEGRLLMIGSTAFFFILAATYTAELASFLTANK 343          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Hypothetical (protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK83_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 1.060e-16
Identity = 66/198 (33.33%), Postives = 103/198 (52.02%), Query Frame = 1
Query:  460 YTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGT--YDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSS--GMAMSSYLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEK 1041
            Y+G ++DLVE+++ RLGF Y++    A V +  +I  V NGT  Y+M  S   I   RL  V F+ PF   GL  V+ P+ L E + +++F PFE  +W  I     ++   L  F+ + N+           S+ R +S   + +S Y T   ++ Q++ +  T E  +   G M   FI+ A++TAELASFL   K
Sbjct:  128 YSGYSIDLVELIAKRLGFEYDIE-GEAGVGSSAIIAAVQNGTNGYNMATSAFTITSSRLAVVRFTQPFFDLGLRIVHEPKPL-EPSVFRIFIPFEGAVWGCIAGCFALIALCLAFFEASYND-----------SEFRSNSINNLFLSMYYTFQTVVQQVSMQAETTEGRLTLMGAMAFFFIIAATYTAELASFLTLSK 312          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Hypothetical (protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A815JV17_9BILA)

HSP 1 Score: 87.0 bits (214), Expect = 6.520e-15
Identity = 69/253 (27.27%), Postives = 120/253 (47.43%), Query Frame = 1
Query:  316 QKNQTFPAGSDVYP-FDRPTLNGQHFNVITEEAAIPFAVITGRENKTGD----YTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSS-YLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALV 1056
            +KN     G+ + P  +R  L G    + T ++  PF ++    +  G     YTG A+DL+++L  +LGF+  + +  +  + +E +  VS G YD++ + V +   R + V FS P     L  V R      ++     +PF   LWVL++ T +    L++L +  KNE L +         R ++S + MS  Y  G ++   +  +  T    +LT+G      I+ AS+TA LAS L   K + ++
Sbjct:  218 KKNSIIWPGNSLTPSVNRALLRGVSLRIGTADSP-PFTLVQNVTDDNGQSTIQYTGYAIDLLQLLMDQLGFSATLLLKPSDQTYNEFVQGVSEGVYDIIIADVTVTSPRREIVGFSSPIYDNSLRTVVRQANDPGIDLLAFLKPFSRRLWVLVLGTCIYASILIFLIERRKNEDLQN---------RSITSQLIMSIWYCFGNMVGYGVEFDARTAGGRLLTAGLYILSLIIVASYTANLASDLTIAKSQFVI 460          
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Match: Hypothetical (protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A814V8A6_9BILA)

HSP 1 Score: 85.9 bits (211), Expect = 8.490e-15
Identity = 67/247 (27.13%), Postives = 116/247 (46.96%), Query Frame = 1
Query:  331 FPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENKTGD----YTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVASWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLWVLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSS-YLTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALV 1056
            +P  S     +R  L G    + T ++  PF ++    +  G     YTG A+DL+++L  +LGF+  + +  +  + +E +  VS G YD++ + V +   R + V FS P     L  V R      ++     +PF   LWVL++ T +    L++L +  KNE L +         R ++S + MS  Y  G ++   +  +  T    +LT+G      I+ AS+TA LAS L   K + ++
Sbjct:    7 WPGNSLTPSVNRALLRGVSLRIGTADSP-PFTLVQNVTDDNGQSTIQYTGYAIDLLQLLMDQLGFSATLLLKPSDQTYNEFVQGVSEGVYDIIIADVTVTSPRREIVGFSSPIYDNSLRTVVRQANDPGIDLLAFLKPFSRRLWVLVLGTCIYASILIFLIERRKNEDLQN---------RSITSQLIMSIWYCFGNMVGYGVEFDARTAGGRLLTAGLYILSLIIVASYTANLASDLTIAKSQFVI 243          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9668.17673.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PBPe1.300e-21892.75domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PBPe2.120e-20686.92domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Uncharacterized4.040e-7540.51protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.660e-7188.64protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
PBPe1.440e-6936.52domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Glutamate1.200e-2533.59receptor ionotropic, delta-1 n=1 Tax=Porphyridium ... [more]
Glutamate1.290e-1833.93receptor ionotropic, kainate 2 n=1 Tax=Porphyridiu... [more]
Hypothetical1.060e-1633.33protein n=1 Tax=Erythrolobus australicus TaxID=107... [more]
Hypothetical6.520e-1527.27protein n=1 Tax=Rotaria sordida TaxID=392033 RepID... [more]
Hypothetical8.490e-1527.13protein n=2 Tax=Rotaria sordida TaxID=392033 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9668contigE_fasciculatus_S2_contig9668:193..5409 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score640.2
Seed ortholog evalue5.8e-181
Seed eggNOG ortholog2880.D7FGS3
Model size1068
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.NMDA glutamate receptor activity
EggNOG OGsKOG4440@1,KOG4440@2759
Cds size1068
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9668.17673.1prot_E_fasciculatus_S2_contig9668.17673.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9668 193..5409 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842612.125226-CDS-E_fasciculatus_S2_contig9668:192..4921696842612.125226-CDS-E_fasciculatus_S2_contig9668:192..492Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9668 193..492 +
1696842612.1424963-CDS-E_fasciculatus_S2_contig9668:1020..11131696842612.1424963-CDS-E_fasciculatus_S2_contig9668:1020..1113Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9668 1021..1113 +
1696842612.1547873-CDS-E_fasciculatus_S2_contig9668:1684..17801696842612.1547873-CDS-E_fasciculatus_S2_contig9668:1684..1780Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9668 1685..1780 +
1696842612.1662211-CDS-E_fasciculatus_S2_contig9668:2397..25141696842612.1662211-CDS-E_fasciculatus_S2_contig9668:2397..2514Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9668 2398..2514 +
1696842612.1773837-CDS-E_fasciculatus_S2_contig9668:3107..32061696842612.1773837-CDS-E_fasciculatus_S2_contig9668:3107..3206Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9668 3108..3206 +
1696842612.187712-CDS-E_fasciculatus_S2_contig9668:3632..37401696842612.187712-CDS-E_fasciculatus_S2_contig9668:3632..3740Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9668 3633..3740 +
1696842612.1980362-CDS-E_fasciculatus_S2_contig9668:4534..45941696842612.1980362-CDS-E_fasciculatus_S2_contig9668:4534..4594Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9668 4535..4594 +
1696842612.213856-CDS-E_fasciculatus_S2_contig9668:5214..54091696842612.213856-CDS-E_fasciculatus_S2_contig9668:5214..5409Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9668 5215..5409 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9668.17673.1

>prot_E_fasciculatus_S2_contig9668.17673.1 ID=prot_E_fasciculatus_S2_contig9668.17673.1|Name=mRNA_E_fasciculatus_S2_contig9668.17673.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=356bp
IRSSCPFRSAGLWQDGAFIREAALGTEIVGVTGQVAFRESTSAVTSGAGT
AGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPDTFVDSNGTIATFE
KISPYQKNQTFPAGSDVYPFDRPTLNGQHFNVITEEAAIPFAVITGRENK
TGDYTGIALDLVEVLSGRLGFTYNVSVANASVSTDEVIGYVSNGTYDMVA
SWVIINEGRLDSVSFSYPFMATGLSFVYRPEVLTEVNWWKMFQPFETPLW
VLIIVTTVVMFALLWLFDGAKNELLTDGVPSATGSKRRLSSGMAMSSYLT
GALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEA
LVRRR*
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mRNA from alignment at E_fasciculatus_S2_contig9668:193..5409+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9668.17673.1 ID=mRNA_E_fasciculatus_S2_contig9668.17673.1|Name=mRNA_E_fasciculatus_S2_contig9668.17673.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5217bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9668:193..5409+ (Ectocarpus fasciculatus EfasUO2)
ATACGATCCAGCTGTCCCTTCAGGTCGGCGGGGCTGTGGCAGGACGGGGC CTTCATCAGGGAGGCCGCGCTCGGGACCGAGATCGTCGGGGTGACCGGCC AGGTAGCCTTCCGCGAGTCGACCTCGGCCGTCACGAGCGGCGCCGGGACG GCGGGGTCCGGGTGGCGGCGGACGAACGGCACCGAGTTCTGCGCGCTGAA CCTGCAGGCGCACGCCTCCCTCGGCGCGACCTTCGCGACCACCATGCTCT GGAAGCCGGACACCTTCGTCGACTCGAATGGGACCATTGCTACATTCGAG GTGTGCCCCGTTCATACACTCGGCGCCTCATCCCCACACATATATGTTCG TTGAATTTAGAGGCATATTTGAGAGATATTGAACGCAGGGAATCTTCTCC AACGATTCACGCCCCCTCCACTTCAATGTATTTCAAACCACGGGGCACCC TGGCTCTGAAAATTTCTACCTCGTCTTCACCGGGGGGTAGGCGGAACTTG GCCCGAGAGTCTTTATCGTGGATGACCACCTGCGTCCACGTTAGCTATAC GCTTGGACCGGCTTTCGCAGCCTAGGATTTCTCTTGGCGGGATTGTTTGG CGTTGGTTATGGTTATTATTGTTGCTGCTGCTGTCGGTGTCGCTGTGTTG TGATTTGGTCGTGGTCGCTGCTTTAGCGGCCCTGCTCGTGTGTTATTGTT AGTGTTGAATTTGTTGTTTTTTGTCGTGAAAATCCACCGGAAGTCTTTGC ATGCGGTATTTTTGTGGATTTTTTCCTCCGGCCGGCTCCTGACGCACGCT CTCCTCCACCTTTGCATGCCTGTGACAGAAAATCAGTCCGTATCAGAAGA ACCAGACCTTCCCCGCAGGGAGCGACGTATATCCGTTCGATAGGCCCACC TTAAACGGTCAACACTTCAATGTGAGCATAATCCCCAGTATCCGAGGCAA ACGGCGTTTCCTACAGGTGTTTCGTACTTTTTTAAGTTGTTCGTCAGTAC CTTCGAACGTTGAAACGTCGAGTGAGCTGCTGCCTTGTACCCATGGTCAA GGTTTTGTCCTCTGGGCATTTTCCGCAATGTCAAGGTTTTCTTGATTAAC CCGAGCCCATAACTTCGGGTTGAGCTCCTGCAATGCATGCACAACACATG ACTTCCTATGGGCACGCTGGACAATGTCGTGTGTTTCTCGCCGTTATATA GCCTACAACACTTGGAGTAAGCTGCCGCTGAAGGCAACGGGGTCCTGGCA TATTGTATGCGTACACTTGTTTCTAACCAGTATCACTTTCATCAGAATTC CTCTTTTCCTATTTGTATGGCGGCCATTCTCTGCCACGACATGGCTTTTG CTGAGTAGCGTGGTGGTGTCCCGGAGTACGTCGCCTTGGTTTCTCGTGAA ATTGAACATGATTGCCCCGCGCCTGCTCATGCTGATGCTGTAGGGTGGTT TCTGACTGTCGTCAATTTTCTTATGTTTCATGGAAACCATAGGTCATCAC CGAAGAGGCCGCCATTCCGTTCGCGGTCATCACTGGGCGAGAAAATAAAA CGGGAGACTACACAGGAATAGCCCTGGATTTGGTCGAGGTGTGCGGTTGT GTGTTCGTGAGTTTTTTTTTGTGTGTGTTGCGTTGTTGTTGTTGTTGGTG GTGGTGGTGGTGGTGGTGGTGGTGGTGTTGTTGTCGTCGTCGTCATCCGT TGTGATGCTCATGAAACTGGTCCTCCCGACATCGCGTTCCATTCAGGAGA TTACCAACCAGAAAACCGTCTCCCGGCCCGTCCGGCTGCACTGCCTCCGA CCCCTTTCCAAATCAACGCCTGCCCAAACCACGGCTAATGTCAGACGCCG CCTTCAGTTGCCGTACCGTAGCGGCTACTGTTTACGGGAGGGGGTGTAAG GAGAAAGAACGGGCAAAGGAAAAAAACATGTTTGTCCCCGGCTACCCGCT TATGAGAACAACATATTCCTCCGGAGTACGGTTTACCAAGCAACGGGATT TGGGACCGTGACTGGTTTGTCCCGACCGTTTAACCCCTTTGAACCCCATG TCTGCTGTTTTACTAATCTCCCTCGTCCCTTGTTTCCTTCTTTCGGTCTT GCGGAACAATGGTGAACGGTTCGGATCGATGACGCAACCGTCAACAAACA ACGAAATTGATCATCACAACGATGACGACGACGACGACGACAACGACAAC GTCAGGTTCTCTCTGGCCGGCTAGGTTTCACGTACAACGTATCCGTGGCG AACGCTTCCGTCTCCACCGACGAGGTCATAGGCTACGTCTCCAACGGAAC CTACGACATGGTGGCGTCATGGGTGAGGCCCCCGTACTCGTTGGTACCAT ACACAATCTTGGTACAGCAGTCCACTCTGAAGATATATTTTGCATGGAAA ATGTTCTGTAGATCGAATCGATTGTGGCATGGCGACTACTCTCATTGCCA GGATTACATTCAGACAACGTCTTCGTGAGAGCAAACCAACTGCAGGGGCG AGCAGCAGCTGATTAGAAGCGCTACCGGCCGTGGGAACGTTCGTCGGAAT GTTCTCCTGCTGGCGTCGTCATGGCCAGTGTATTCTTCAACAAGATGAAA TCAAACTTGAACACATGACAACCCAAATCCATTGGCGGGGTCGATGATAT GTTGCCGACATTGATAAGAGCGGTCGGCGGACTGGGTCGACACCGCCACA CAATTTGTTTTGTCCGTTCGCGTGAACAAGCCATCTTAGTTTCGACAAAA CCTTAACAACGCGTATTGAGACACCTGACAAAGAACGAACCTGATTGTTG TTAACAGCGAAACCAAAAGTATCCCAACACCCCAGAACTCGAAAAAGCTT GGTTCTGGACCGCTACAAGACAATCAATATTCGAATTCTTCAATAATCTT TCTGCTTAACTCCAGGTGATCATTAACGAGGGCCGACTGGACAGTGTGTC GTTTTCCTACCCCTTCATGGCGACGGGGCTGTCCTTCGTCTACCGACCGG AGGTTCTTACCGAGGTGAGGAGACGATACTGCTTCCAAGCTCATCCCCCT GAAAATATTATGCGTGTTGCTTTGAAGTCAGCTAACGGTATCACACGGCT TTAAATGATGAATTACTTCACGGTGAAGGGATTGCCAAAATCAAATGATA CGGTTCCGAAAGCTCTCGATGAGAGGGTTCCGATGAACACCGTCACCTGC TGAGTTAGCCGAGCTTTGGCAAATGGGTCAAGAGGGTGTGGTATTAGGTC AAGGGGGTGTGGTATCTTATGCACCATGCGGTACAATACATACCTCTTGT CCGCCCGCGTTTTCATGCTAAGACGCTAAAGAATGTTAACCCCATTGGAA ATTGTGGCCCCGGGGTATATTTCTATTATGTAGACATACAGCAACATAAA TACCTCCCGTGTTGTCATAACGCCTCCTTTCGTCTTTCAGGTAAACTGGT GGAAAATGTTCCAACCTTTCGAGACACCGCTCTGGGTGCTCATTATCGTG ACTACGGTGGTGATGTTCGCTCTACTCTGGCTCTTTGACGGCGCAAAGGT GCGGACGGACTGGACGGAAACTCAAGAAGAGTTTCTCAAGTAACATACAC GTTTTACGTCTAACGTCCCGTTTACTCTGGACGTCGTTTCGCACCTTTCG ATACACTTTTGTGGAAGCATTAGCCGGGGTCACGAAGGAGAAAGTGGCCT CAACGGACAGATTGGGGGATTGGTCTCTTGTGGAGAAGGTTAGCACGGTA GGTTAGCACAGAGGCGGCGGGTACAAGGCCTCTCGGTATGGCATCAGCTT CGGGAAGCGGGAAGTGGAACCAAGTATATGTGCTCAGTAGTATTCGAAAA TAAAACGTTTCTCTGTCTCTTCGATCATGTAAAATCACGTGTGGGAGCAA TTCCTGCCAACTTTCAGCATCGTCTGGCATTCTCCATGTGTTAAGCCAGC CCGTTTTGGCCTACCTCGTGTCGGAATTCATGCCACCGCCGTAGCCCTGC CAACGTAGGGTTTCCGCATACCTTGACCCACTCGATGCGTCGAAAGTGCG TTACGCTGTGTACGAAACCATGCCCCCCTGACGTGCTCAGATGAAATTTG TTCGAATCCTGGTTTCTGAAGAGTTGCTGGTTCCTGTCAGGCGTGTAAGA AACCAGGCAGTTTAATCAAGTTTTTCCGACGACCGCACGAAACTGTCGGT TTTTTTTCTTTCCCGATCTCTGAATAACGGGCCGTTTCATTCGTACGGAA AGTCGCGGGAGTTGTTCATTGCATGACGCACCGATTGATCATGCAGAAAC CCTTTGACATTCCCCCTACACCGAATCTTCGGAGTCCTGCAGAACGAGCT TCTCACGGACGGGGTGCCGTCGGCGACGGGGAGCAAACGGCGGCTTTCAT CGGTGAGTTCTGCGGGACAACGTGTAGTTGTTCGTAGTAACAAGTAGGGT TATGTTTAGCATTGAATGTCTCAAGGGCTTGGATAAGATTACTACAACGC TGGGGCATCCCACATAGGAAATAAAAACCGTGCCTTGATTCGAACAAGTT TGAAGTGGGGGTGCGTTCGGTATGCCAGGAACTCCTCTAGATATAGTTAG TCCTGGAGACTTAACCTCGTGTGCCGTCCTGCGGTCTGCGGTGCTCTCTG CTCCACTCTGCTCCTCTCACCCGCGCAAGCCGCCCATAAACCAAAGCGCA TGATGAGTCGCCCACTGCTTCGAGAGATACGAATTATTTACGGCACACCA TGTCTTGTCATGTGGGGCCACTGCGACGAACACATATACTCCAAACGCCA CCATTCCCACGTATGCCCATATCGGAAATATCTCCCCGCCCCCCTGTTGT CCAACGTTCTAGGAAGGAACGGTTGTTCGTCTGTGATCGGTCCTGTGGGA ACAATGCTCCGTCCTCCCGAGGACGTGTGGTCAATAGTCTAACGGCTAAG GCATGTAAAACATAAGAGTACGCCCCCCCCCCCCGCGCTGTTGTCCAACG TTCTTCGCGATGAACCACTCAGGGCATGGCGATGTCGTCGTACCTGACAG GGGCCCTGCTGATGGGACAGATGGCCCACGAGCCCTACACCGTCGAGAGC TATATCCTCACATCGGGGTGGATGTTCGCGTGTTTTATCCTCGGGGCGTC CTTTACCGCCGAGCTGGCGTCATTCCTCGCTGCAGAAAAGGAGGAGGCCC TGGTGCGGCGGCGGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9668:193..5409+

>mRNA_E_fasciculatus_S2_contig9668.17673.1 ID=mRNA_E_fasciculatus_S2_contig9668.17673.1|Name=mRNA_E_fasciculatus_S2_contig9668.17673.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1068bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9668:193..5409+ (Ectocarpus fasciculatus EfasUO2)
ATACGATCCAGCTGTCCCTTCAGGTCGGCGGGGCTGTGGCAGGACGGGGC
CTTCATCAGGGAGGCCGCGCTCGGGACCGAGATCGTCGGGGTGACCGGCC
AGGTAGCCTTCCGCGAGTCGACCTCGGCCGTCACGAGCGGCGCCGGGACG
GCGGGGTCCGGGTGGCGGCGGACGAACGGCACCGAGTTCTGCGCGCTGAA
CCTGCAGGCGCACGCCTCCCTCGGCGCGACCTTCGCGACCACCATGCTCT
GGAAGCCGGACACCTTCGTCGACTCGAATGGGACCATTGCTACATTCGAG
AAAATCAGTCCGTATCAGAAGAACCAGACCTTCCCCGCAGGGAGCGACGT
ATATCCGTTCGATAGGCCCACCTTAAACGGTCAACACTTCAATGTCATCA
CCGAAGAGGCCGCCATTCCGTTCGCGGTCATCACTGGGCGAGAAAATAAA
ACGGGAGACTACACAGGAATAGCCCTGGATTTGGTCGAGGTTCTCTCTGG
CCGGCTAGGTTTCACGTACAACGTATCCGTGGCGAACGCTTCCGTCTCCA
CCGACGAGGTCATAGGCTACGTCTCCAACGGAACCTACGACATGGTGGCG
TCATGGGTGATCATTAACGAGGGCCGACTGGACAGTGTGTCGTTTTCCTA
CCCCTTCATGGCGACGGGGCTGTCCTTCGTCTACCGACCGGAGGTTCTTA
CCGAGGTAAACTGGTGGAAAATGTTCCAACCTTTCGAGACACCGCTCTGG
GTGCTCATTATCGTGACTACGGTGGTGATGTTCGCTCTACTCTGGCTCTT
TGACGGCGCAAAGAACGAGCTTCTCACGGACGGGGTGCCGTCGGCGACGG
GGAGCAAACGGCGGCTTTCATCGGGCATGGCGATGTCGTCGTACCTGACA
GGGGCCCTGCTGATGGGACAGATGGCCCACGAGCCCTACACCGTCGAGAG
CTATATCCTCACATCGGGGTGGATGTTCGCGTGTTTTATCCTCGGGGCGT
CCTTTACCGCCGAGCTGGCGTCATTCCTCGCTGCAGAAAAGGAGGAGGCC
CTGGTGCGGCGGCGGTGA
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