mRNA_E_fasciculatus_S2_contig964.17651.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Queuosine (salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIV2_ECTSI) HSP 1 Score: 669 bits (1727), Expect = 1.670e-234 Identity = 355/380 (93.42%), Postives = 362/380 (95.26%), Query Frame = 1
Query: 1 MAAMADPQGTLGGEGGLLARVVATSATACEEQKVARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEPAPATTPTGTAEAAADGAPREGGEIAETAAGASSAGGRPVPVFKPKDTAELRAAAVQACHRMAESLGEDYRPHELSLYLKRLSRRKEYKDAPRFLPKGSRAL 1140
MAAMAD QGTLGG+GGLLARVVATSATACEEQ+VARINDDAMAKF+DGGGVPLDKYKRAASRVPLPLKFDDAAQ EINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALP FQDTETVNG DV+MLKNAQVLAGELS+RMGKAVEDLRFDDSDKLTAV DADVITAL TLGILEPA TPTGTAE AADGAPREG EIAETA GASSA GR P FKPKDTAELRA AVQACHRMAESLG+DYRPHELSLYLKRLSRRKEYKDAPRFLP+ SRAL
Sbjct: 1 MAAMADQQGTLGGKGGLLARVVATSATACEEQQVARINDDAMAKFLDGGGVPLDKYKRAASRVPLPLKFDDAAQ-EINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPGFQDTETVNGLDVLMLKNAQVLAGELSSRMGKAVEDLRFDDSDKLTAVADADVITALTTLGILEPAKTATPTGTAETAADGAPREGEEIAETAVGASSADGRVGPAFKPKDTAELRAVAVQACHRMAESLGKDYRPHELSLYLKRLSRRKEYKDAPRFLPRESRAL 379
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Queuosine (salvage protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z942_9STRA) HSP 1 Score: 240 bits (613), Expect = 1.270e-68 Identity = 163/367 (44.41%), Postives = 208/367 (56.68%), Query Frame = 1
Query: 49 LLARVVATSATACEEQKVARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVRE-DAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPG-VEGLVRSLSGALP-AFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEPAPATTPTGTAEAAADGAPREGGEIAETAAGASSAGGRPVPVFKPKDTAELRAAAVQACHRMAESLGEDYRPHELSLYLKRLSRRKEYKDAPRFLPKGSRAL 1140
LL+R+ ++A A E Q I A+ V V +KR + VP PL F Q INFH+ LA+L FGGS+EP+L+ T + ++D +FGLIG+H+SR R DA +M++A +S F IP+RE + S+IPGV V+RPG L L L+ G LLS GY D AQF+L + ++ G E LV +L ALP AF D G M KNAQ+LA EL RMGK++ L+ D DKLTAV DAD IT LI LGIL PA D A G E A A+ AG + F DT LR AA ACH++AE LG+ Y P ++LY+ LSR YKD PRF+P SRAL
Sbjct: 11 LLSRIRQSTAQAYEAQNRVVIYTKALNDLV----VDAKAFKRYTTPVPYPLSFGTPGDQ-INFHTGLAMLRFGGSYEPDLVARTRNTLEDTIRFGLIGAHISRSRFDAAFMRDASPNDISSTFNIPMREAEQVSSIPGVMVERPGPLAPLVADLQEALHAVGARLLSLGYQDAAQFVLDALKAGGGSAERLVSALVQALPSAFDDACEAGGMSAAMHKNAQLLALELHHRMGKSLPLLQLSDVDKLTAVADADTITGLIQLGILRPA------------GDAAAAPGSEPAV----AAEAG---LKAFTAADTNVLRVAACVACHKLAERLGDGYAPISVALYINHLSRSASYKDLPRFIPAKSRAL 353
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Queuosine (salvage protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433CWU1_9FUNG) HSP 1 Score: 126 bits (316), Expect = 6.230e-28 Identity = 107/330 (32.42%), Postives = 157/330 (47.58%), Query Frame = 1
Query: 181 SRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPV-REDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSD----PGVEGLVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFD--DSDKLTAVVDADVITALITLGILEPAPATTPTGTAEAAADGAPREGGEIAETAAGASSAGGRPVPVFKPKDTAE---LRAAAVQACHRMAESL-GE-------DYRPHELSLYLKRLSRRKEYKDAPRF 1116
S V +PLKFD QQEINF + + LL+FG + L TG D +FG + H+ A+ + V V++ F+IP+ RE P +P +T+ P L A+A+ SVLNETG+ LL+ GY +M+QFIL + + + P GLV A P F+D V+G +V + K AQ+LA L + + + RFD D LT D + T L LG++ I ++ A R + V + TA+ LRAAA+ AC + + GE D +L +YL RL + Y++ RF
Sbjct: 38 STVRMPLKFD-TTQQEINFIAFVDLLNFGSGYRVPLHEATGRGAFDTVRFGAMSHHIGGLPWTASHFHSTTVFEVAQTFQIPLDREVHPEGMPFLTMSEPHELRKLAEAITSVLNETGQVLLNGGYANMSQFILQATKPEQGRPPSAVGLVEKFVRAFPGFRDMAKVDGQNVYLFKKAQILAYHLYI-LFRTQDPARFDFVDIASLTIFSDNVIPTMLAHLGVVR------------------------IPDSLA-------RRIAVHEDIGTADATRLRAAAIFACEEIVRATRGESGLGPVRDMTEADLDVYLWRLGKVGAYREVTRF 334
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Queuosine (salvage protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR61_PYTIN) HSP 1 Score: 123 bits (308), Expect = 6.860e-27 Identity = 92/268 (34.33%), Postives = 136/268 (50.75%), Query Frame = 1
Query: 49 LLARVVATSATACEEQK-VARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPV-REDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARS----DPGVEGLVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILE 834
LLARV ++ A V IN+D + F+D + +Y+ ++ PL F + Q E+NF +LLALLSFG + EL + T + FGLIG ++S RLDA +M + +++ F +P+ R++ ST G+ V +PG L A+ + L E RG++D+ F+L RS P LV SL PAF D G+ LK AQ++A L R + E+ RF+D + TA+ D + L LGILE
Sbjct: 11 LLARVRSSCAAQLRHNDCVVAINNDKIRAFLDE--LDWSQYEELSAPQRFPLNFR-SLQDEVNFMTLLALLSFGSGYRKELHKYTQRGASETILFGLIGMYISVPRLDADYMAXVSIDVLADFFSLPLDRDEEIST--GIYVSKPGPLRPLAEMMHKKLKE-------RGFSDLGAFVLAHLRSTESSSPSAAHLVESLVETFPAFDDHREYRGASCFFLKRAQLVAVSLYRRFQETNEEFRFEDVSEXTALSDNVLPCVLRALGILE 266
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Queuosine (salvage protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DF13_9EUKA) HSP 1 Score: 110 bits (275), Expect = 1.550e-22 Identity = 102/365 (27.95%), Postives = 161/365 (44.11%), Query Frame = 1
Query: 79 TACEE----QKVARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEGLVRSLSGALPAFQDTETVNGS-------DVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEPAPATTPTGTAEAAADGAPREGGEIAETAAGASSAGGRPVPVFKP-KDTAELRAAAVQACHRMAESLGE----DYRPHELSLYLKRLSRRKEYKDAPRFLPK 1125
T+CE+ K ++N++ + F V L + + A +PLPL+F + + E+NF + L L++FG + L G + +G+IG H+S ERLDA +++ + + F+I R ++ +++PG+T + PG L A+ + VLN+ G L +G A + +D G+V+ L PAF D V DV K AQ+ A +L + + E F D LT D + L GI+E E A +E V KP ++ ELRAAAV AC + SL E + +L YL RL ++ Y++ R K
Sbjct: 10 TSCEKLIETAKHVKVNEEKVKDFA--ANVVLKELENGARPIPLPLRFP-SWEDEVNFWTCLNLINFGSGYRHLLKESHGKGAYETMLYGMIGLHISGERLDAERLQSINALDIESCFRIKYRVESATSVPGLTKEGPGPLYDLAKRIQKVLNDAGRILWEKGQKSFATLLFGD--NDFTAAGVVKKLVETFPAFDDHTFVKVDEGEGGHVDVAYYKKAQLNACDLYKALRRKDERFAFADISSLTVFTDNVLPAVLRYEGIIEVEE--------ELVAKIDKKE--------------------VIKPGREECELRAAAVVACEHIIASLKEQRDVEIPAMDLDYYLWRLGKKDGYRERERHYTK 341
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Queuosine (salvage protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U497_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.670e-20 Identity = 82/263 (31.18%), Postives = 127/263 (48.29%), Query Frame = 1
Query: 82 ACEEQKVARINDDAMAKFVDGGGVPLDKYKRAASRVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTG---SNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAP-STIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSD--PGVEGLVRSLSGALPA-FQDTETVNGSDVVM----LKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEP 837
A E + R++ +A+ + L + + +RV LPLKF E+NFH++L+LLSFG ++E + + +G + D FGLIG HLS+ L A ++ V+ F I E+ P ++P + V+RPG L L + +N G L G D+A FIL + R + P V LV +L A P+ F GS K + +LAGEL R+ + + F D + +IT L++ G+L P
Sbjct: 26 ASERTSIVRVDHEAVGRLA--AQFSLSEIRDKVARVGLPLKFPRPLD-ELNFHAMLSLLSFGKAYEGDFISQSGLLRESARDTVLFGLIGLHLSKTDLRAGFLMTVTRSDVASYFGIEPMENVPHDSMPAIRVERPGPLSRLVDELVTSMNTVGARLKELGEPDLAHFILAAMRGEEVPTVARLVTALDAAFPSTFGAPLPCPGSRTETGFHCRKKSLMLAGELYHRLRHSFAEFDFQDFSRAPGYATPALITFLVSRGVLCP 285
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Queuosine (salvage protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AX27_9AGAM) HSP 1 Score: 98.6 bits (244), Expect = 3.670e-18 Identity = 89/301 (29.57%), Postives = 142/301 (47.18%), Query Frame = 1
Query: 187 VPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLTGSNVDDAAKFGLIGSHLS----RERLDATWMKNAHVGSVSEGFKIPVR---EDAPSTIPGVTVDRPGA-LVSHAQALCSVLNETGEALLSRGYTDMAQFILHSARSDPGVEG-------LVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVED-LRFDDSDKLTAVVDADVITALITLGILEPAPATTPTGTAEAAADGAPREGGEIAETAAGASSAGGRPVPVFKPKDTAE----LRAAAVQACHRMAES 1029
V +PL+F A EIN S+L++L+F S+ L + TG D + + G +LS + L A +KN G V+E ++ E A TIPG+T+ + G L + +VLNETG L++RGY ++ +F+LH+ + EG ++ + A PAF+D NG +V + K + L R G A + D+ +L D + + L+ GIL+ + A P EAA G + +G + + P+ +AE +RAAAV AC + E+
Sbjct: 63 VAMPLQFPTVAS-EINVISVLSILNFAHSYRVPLKKATGRGAYDTMRALIFGLYLSSNDEEDLLSAKGLKNLTSGRVAELMQLSGHLHIEQAHPTIPGLTIGQLGGPLYELVTEVTNVLNETGAILVTRGYPNLGEFVLHALKMGQTSEGGPVDPEVVLDEVIRAFPAFRDVGVYNGKEVFVFKKVLFMLHALVMRFGNATPPKIPLPDTSQLPIFSDNVIPSMLVHFGILDLSAANVPK-LREAAPFGTLAVAANLHYVPSGEKKSNSSEMMAKGPELSAEEAYVMRAAAVDACEMIVEA 361
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Queuosine (salvage protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ID34_GUITC) HSP 1 Score: 90.9 bits (224), Expect = 1.470e-15 Identity = 86/298 (28.86%), Postives = 127/298 (42.62%), Query Frame = 1
Query: 184 RVPLPLKFDDAAQQEINFHSLLALLSFGGSHEPELLRLT---GSNVDDAAKFGLIGSHLSRERLDATWMKNAHVGSVSEGFKIPVREDAPSTIPGVTVDRPGALVSHAQALCSVLNETGEALLSRGYTDMAQFILHSA--------RSDPGVEG--LVRSLSGALPAFQDTETVNGSDVVMLKNAQVLAGELSARMGKAVEDLRFDDSDKLTAVVDADVITALITLGILEPAPATTPTGTAEAAADGAPREGGEIAETAAGASSAGGRPVPVFKPKDTAELRAAAVQACHRMAESLGE 1038
R LPL FDD +QEINF++LLA LSFG + + G D+ LI H+ + LDA + + ++S+ IP+ ++ + D P SVL+ L SRG+ D+A FIL S SD LV L FQD V S V + + AQ++ +L AR L F D + LT DA+ +T L L ++E +PA ++ E AG+ ++ A LR A V+AC ++AE + +
Sbjct: 89 RFGLPLVFDDV-KQEINFYALLATLSFGSGWQEGVWSKAPTKGVPTRDSVLNMLISLHMDSKNLDAAGLAEVSLFALSQALDIPLTKEKRLDGGPIRQDVPSDYRWLVDKYYSVLSSLSSDLTSRGFKDLADFILSSRMHGHVRVDESDVNFSASLLVERLVKCFETFQDVANVGQSSVPLHRKAQLVCEDLVARFAAREHRLNFTDMEDLTLGSDAETVTWLRKLSLIEVSPALA-------------KKIDSDKEIEAGS-------------REEAALRVAGVKACMKLAEEINK 359
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 9.280e-14 Identity = 64/152 (42.11%), Postives = 84/152 (55.26%), Query Frame = 1
Query: 1966 IGKTEMYRPDSNLDGIDDARAIYHFVGANNPRHDA*TMTEGF-NDIKLVMSM-GR--LAEGEKSR*A-----GQSDAKC-GKVAG*ASEPMLGEEVVVVRMGPRTHSCPRTHLVSGSWWACQR------FLYEAHPDVNPPMRKGGVNEKLI 2373
IGK E+YRP+S L GI+ R +YHF GAN P+ D T TEG ND KLV GR L+ EKS+ G ++C GK AG +P+ GEE V R RT+ RT L S ACQR ++ + +P + P +R+G V E +I
Sbjct: 526 IGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLENDCKLVRKREGRDSLSSQEKSKLVEVKVLGAVASRCKGKGAG-LQDPVSGEEDVTCRKVKRTYRL-RTRLASCFCSACQRCEHEQCYVSKTYPRLLPALREGEVKETVI 675
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 5.820e-13 Identity = 62/153 (40.52%), Postives = 80/153 (52.29%), Query Frame = 1
Query: 1963 YIGKTEMYRPDSNLDGIDDARAIYHFVGANNPRHDA*TMTEGFNDI-KLVMSM---GRLAEGEKSR*AGQSDAKC---------GKVAG*ASEPMLGEEVVVVRMGPRTHSCPRTHLVSGSWWACQRFLYE------AHPDVNPPMRKGGVNE 2364
+IGK E+YRP+S L+G++ R +YHF GAN P+ D T TEG KLV+ GR + EKSR + K G+ AG +P+ GEE V R RT+S RT L S ACQR YE +P + P M+KG V E
Sbjct: 731 FIGKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTTTEGLEGYCKLVLRSEGGGRSSNLEKSR---LGEVKVLGAVASRWKGQGAG-LQDPVSGEEDVTCRKVKRTYSL-RTRLASCFCSACQRSEYEQCYVSKTYPRLVPAMQKGVVKE 878 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig964.17651.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig964.17651.1 >prot_E_fasciculatus_S2_contig964.17651.1 ID=prot_E_fasciculatus_S2_contig964.17651.1|Name=mRNA_E_fasciculatus_S2_contig964.17651.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=381bp MAAMADPQGTLGGEGGLLARVVATSATACEEQKVARINDDAMAKFVDGGGback to top mRNA from alignment at E_fasciculatus_S2_contig964:12096..19252+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig964.17651.1 ID=mRNA_E_fasciculatus_S2_contig964.17651.1|Name=mRNA_E_fasciculatus_S2_contig964.17651.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7157bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig964:12096..19252+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig964:12096..19252+ >mRNA_E_fasciculatus_S2_contig964.17651.1 ID=mRNA_E_fasciculatus_S2_contig964.17651.1|Name=mRNA_E_fasciculatus_S2_contig964.17651.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1143bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig964:12096..19252+ (Ectocarpus fasciculatus EfasUO2)back to top |