mRNA_E_fasciculatus_S2_contig96.17616.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ2_ECTSI) HSP 1 Score: 689 bits (1778), Expect = 1.770e-243 Identity = 339/480 (70.62%), Postives = 401/480 (83.54%), Query Frame = 1
Query: 472 RDGASEDEATLVCHTHSSYALEIQAACSRLHWYLCEALGIYDYGDATGCPNTARTLKQTFEEIAAWMDLPENSEELLFIKLETYVGNRASLLPDCITEVFGTDMVFGPLDFITWEKISGTEQWPSTEYLVSNGKRLVISSSVRENADTIFKINEYNDINGIFNEDATTAIEFRTGVPCSSRTRDPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGAADSMSALECGLIPTFDRMDSSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACRDDSSGERGEWVVSNGAAGYFGAAELVCLAQGLVFGCPRTAKENAALRESMTNAKVESVWLNLLSSGGESSSTWARESGVAYSLATTFTHATCDGGGYSAAAEYIWDAGDAWKYGDTAFYEKAERIKAEALVLRRQADALEAPSESSEDESTS-MEEANALTAAAMRLQAERLENSAREAGAYPKGW 1908
RDG S++EATLVCHT S A EI CSRL WYLCEALGI D+GD TGC +TA +LK+TF+EI+AW+DLPENSEELLFIK+E Y G+ SLLPD IT VFGT++VFGPLDFI W +ISG+EQWP+TEYLVS GKRLV ++ E+ADT+F+I+ ND +G+F+ED +A+ FRT PCS+RTR PSWSRVQG A+T++IEYTD+TLY P A+EFFGA+D+M AL+CGLIPTFDRMDS LLEATMWSWEEGEPHAYFSS RAAV HQETGRWTSGSA +EEESD++HSYACR+DSSGERGEWVVS+GAAGYF AAELVCL+QGLVFGCPRTA+ENAALR SMT+ V+ W+NLLS GG SS+WARESGVAY+L TT+THATCDG GYS AA++ W+A +AW YGD AFY+KAERIK EA LR +A+ LE SE E T ++E +ALTAAAM QA++LEN+AREAGAYPKGW
Sbjct: 2 RDGRSQEEATLVCHTRPSSAQEIHELCSRLRWYLCEALGIQDFGDDTGCSSTAPSLKETFDEISAWLDLPENSEELLFIKIEDYTGDNVSLLPDYITTVFGTEIVFGPLDFIEWNRISGSEQWPTTEYLVSQGKRLVFGTNGEEDADTMFRISRENDADGLFHEDNISAVRFRTSAPCSTRTRSPSWSRVQGEASTWVIEYTDVTLYALLPEADEFFGASDAMDALKCGLIPTFDRMDSRLLEATMWSWEEGEPHAYFSSPRAAVVHQETGRWTSGSASTSEEESDDIHSYACRNDSSGERGEWVVSSGAAGYFSAAELVCLSQGLVFGCPRTAEENAALRVSMTDVGVKDAWVNLLSPGGALSSSWARESGVAYTLPTTYTHATCDGDGYSGAADFTWNADEAWTYGDRAFYDKAERIKDEAQALRAEAELLELSSEGQEGTLTGGIDEIDALTAAAMWKQADQLENAAREAGAYPKGW 481
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ3_ECTSI) HSP 1 Score: 680 bits (1755), Expect = 1.130e-241 Identity = 345/376 (91.76%), Postives = 361/376 (96.01%), Query Frame = 1
Query: 781 MVFGPLDFITWEKISGTEQWPSTEYLVSNGKRLVISSSVRENADTIFKINEYNDINGIFNEDATTAIEFRTGVPCSSRTRDPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGAADSMSALECGLIPTFDRMDSSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACRDDSSGERGEWVVSNGAAGYFGAAELVCLAQGLVFGCPRTAKENAALRESMTNAKVESVWLNLLSSGGESSSTWARESGVAYSLATTFTHATCDGGGYSAAAEYIWDAGDAWKYGDTAFYEKAERIKAEALVLRRQADALEAPSESSEDESTSMEEANALTAAAMRLQAERLENSAREAGAYPKGW 1908
MVFGPLDFITW+ ISGTEQWPSTE LVSNGKRLVISS+VRE+ADT+FKINEYNDING+FNED +TA+EFRTGVPCSSRTRDPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGA DSMSALECGLIPTFDRMDSSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACRDDSSGERGEWVVSNGAAG FGAAELVCLAQGLVFGCPRTAKENAALRESMT+A VESVWLNLLSSGG SSSTWARESGVAYSLATT+THATCDGGGYSAAAE WDAGDAW YGDTAFYEKAERIKAEA L +ADALEA SESSEDEST+M+E+NALTAAAMR++AER+ENSAREAGAYPKGW
Sbjct: 1 MVFGPLDFITWKVISGTEQWPSTENLVSNGKRLVISSNVREDADTMFKINEYNDINGLFNEDISTAVEFRTGVPCSSRTRDPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGAGDSMSALECGLIPTFDRMDSSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACRDDSSGERGEWVVSNGAAGCFGAAELVCLAQGLVFGCPRTAKENAALRESMTDANVESVWLNLLSSGGASSSTWARESGVAYSLATTYTHATCDGGGYSAAAEXTWDAGDAWTYGDTAFYEKAERIKAEASELLSKADALEALSESSEDESTNMDESNALTAAAMRVEAERIENSAREAGAYPKGW 376
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: CCHC-type (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B0_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.080e-91 Identity = 162/271 (59.78%), Postives = 189/271 (69.74%), Query Frame = 1
Query: 961 EDATTAIEFRTGVPCSSRTR-DPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGAADSMSALECGLIPTFDRMDSSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACRDDSSGERGEWVVSNGAAGYFGAAELVCLAQGLVFGCPRTAKENAALRESMTNAKVESVWLNLLSSGGESSSTWARESGVAYSLATTFTH------ATCDGGGYSAAAEYIWDAGDAWKYGDTAFYEKAERIKAEALVLR 1752
E A +E G ++ T D + + G A+T++IEYTD+TLY P A+EFFGA+D+M ALECGLIPTFDRMDS LL ATMWSWEEGEPHAYFSS RAAVAHQETGR+ + S SGERGEWVVS+GAAGYF AAE+VCL+QGLVFGCPRTAKENAALR S + V W+NL S GG SS+WARESG AY+ TT+TH ATCDGGGY A++ W+A +AW YGD AFY+KAERIK E LR
Sbjct: 194 EGAVFVVEVPAGGASANATALDVAEEALVGEASTWVIEYTDVTLYALLPEADEFFGASDAMGALECGLIPTFDRMDSRLLGATMWSWEEGEPHAYFSSPRAAVAHQETGRYPESVQMGLN------RSTLSLFPGSGERGEWVVSSGAAGYFSAAEMVCLSQGLVFGCPRTAKENAALRVSTMDVGVVDAWVNLRSPGGTLSSSWARESGAAYTPPTTYTHVNLEADATCDGGGYYGVADFTWNADEAWTYGDRAFYDKAERIKNEVQALR 458
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC9_9PHAE) HSP 1 Score: 307 bits (786), Expect = 6.860e-87 Identity = 180/511 (35.23%), Postives = 279/511 (54.60%), Query Frame = 1
Query: 241 TSPWLLRASALQRFLGYDMPLDQVPMIATHNSYNTEED-GVSIEWEVVPNQVYSLTQQLSCLGVRGLELDVHFVEELARDGASEDEATLVCHTHSSYALEIQAACSRLHWYLCEALGIYDYGDATGCPNTARTLKQTFEEIAAWMDLPENSEELLFIKLETYVGNRASLLPDCITEVFGTDMVFGPLDFITWEKISGTEQWPSTEYLVSNGKRLVISSSVRENADTIFKINE--YNDINGIFNEDATTAIEFRTGVPCSSRTRDPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGAADSMSALECGLIPTFDRMDSSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACRDDSSGERGEWVV------SNGA-----------------------------------AGYFGAAELVCLAQGLVFGCPRTAKENAALRESMTNAKVESVWLNLLSSG----------GESSSTWARESGVAYSLATT 1611
TS WL RA+ALQR++GYD+PL + + ATHNS++ + + +EVV QVYS+T QLSCLGVRGLE+D+H+++ELA +G E+ A +CH A ++ C W +CEA I+DYG+ TGC A T + FEE+A+W+ L EN+ E+LF+KL++ + + + +++VFG D++F P D WE+ SG++ WPS LV+ G R++I+ S E++ +F + + N D + ++ G P +PSW RVQG+ + ++ + T++E P ++E ++ + + + CG PTFDR+D+ L+E+T+WSW+ P F RAAV GRWT + + +S E HS+ACR+ S R +W V S+G+ +G F A+ C + G VFG PR+A ENA L +++A ++S W++ S G G SS W E G Y +AT+
Sbjct: 56 TSDWLHRAAALQRYIGYDIPLSSITLTATHNSFSHDRNISTHANFEVVTAQVYSMTDQLSCLGVRGLEIDLHYIDELAVEG-DEESAIRMCHASEDVAEQMVDLCDTFGWDVCEAADIFDYGEDTGCRPGAPTARTGFEEVASWLFLEENANEVLFLKLDSSLNDEDETVSTIVSDVFGEDVIFSPTD---WEEFSGSDDWPSPAELVAMGTRVIIAGS--ESSTLVFSTDSDAIEVLTAAENFDTSECVDVE-GFP------EPSWHRVQGDMVEYRLDRANSTIFELVPGSDEALTSSMTANVMNCGFTPTFDRLDADLMESTIWSWDTDRPETGFDLPRAAVISSSGGRWTD---VETDSDSGERHSFACRN--SDLRYDWTVVAVDTGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXSTSEIEFSDYSGEFSEADEACESVGYVFGAPRSAYENAILSFVLSSAGLDSAWIDHTSEGESGGSGSSASGGSSLCWTHEGGSEYCVATS 548
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A0_9PHAE) HSP 1 Score: 251 bits (642), Expect = 4.440e-76 Identity = 129/228 (56.58%), Postives = 155/228 (67.98%), Query Frame = 1
Query: 472 RDGASEDEATLVCHTHSSYALEIQAACSRLHWYLCEALGIYDYGDATGCPNTARTLKQTFEEIAAWMDLPENSEELLFIKLETYVGNRA-------------------SLLPDCITEVFGTDMVFGPLDFITWEKISGTEQWPSTEYLVSNGKRLVISSSVRENADTIFKINEYNDINGIFNE------------------DATTAIEFRTGVPCSSRTRDPSWSRVQ 1044
RDG SE+EATLVCHT S A EI+ CSRL WYLCEALGI D+GD TGC +TA +LK+TF+EI+AW+DLPENSEELLFIK+E Y G+ SLLPD IT VFGT VFGPLDFI W +IS TEQWP+TEYLVS GKRLV ++ +E+AD++F+ + ND +G+F+E D T+AI FRT PCS+RTR PSWSRVQ
Sbjct: 2 RDGRSEEEATLVCHTRPSSAQEIREVCSRLRWYLCEALGIKDFGDDTGCSSTAPSLKETFDEISAWLDLPENSEELLFIKIEDYTGDNVGIIVVLCAVCCFRLLSVSVSLLPDYITTVFGTKSVFGPLDFIEWNRISETEQWPTTEYLVSQGKRLVFGTNGQEDADSMFRKSRENDADGLFHELHMTPWRQAGTFAKRGRQDITSAIRFRTSAPCSTRTRSPSWSRVQ 229
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR16_ECTSI) HSP 1 Score: 255 bits (651), Expect = 2.080e-75 Identity = 137/364 (37.64%), Postives = 215/364 (59.07%), Query Frame = 1
Query: 286 GYDMPLDQVPMIATHNSYNTEED-GVSIEWEVVPNQVYSLTQQLSCLGVRGLELDVHFVEELARDGASEDEATLVCHTHSSYALEIQAACSRLHWYLCEALGIYDYGDATGCPNTARTLKQTFEEIAAWMDLPENSEELLFIKLETYVGNRASLLPDCITEVFGTDMVFGPLDFITWEKISGTEQWPSTEYLVSNGKRLVISSSVRENADTIFKINEYNDINGIFNEDATTAIEFRT-------GVPCSSRTRDPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGAADSMSALECGLIPTFDRMDSSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACR 1353
GYD+PL + ATHNS++ + + +EVV QVYS+T QLSCLGVRGLE+D+H+++ELA +G E+ A +CH A ++ C W +CEA I+DY + TGC A T + FEE+A+W+ L EN+ E+LF+KL++ + + + +++VFG D++F P D WE+ SG++ WPS LV+ G R++I+ S E++ +F D + + E +A +F T G P +PSW RVQG+ + ++ + T++E P ++E ++ + + + CG PTFDR+D+ L+E+T+WSW+ P F RAAV + GRWT + + +S E HS+ACR
Sbjct: 14 GYDIPLSSKTLTATHNSFSHDRNISTHANFEVVTAQVYSMTDQLSCLGVRGLEIDLHYIDELAVEG-DEESAIRMCHASEDVAEQMVDLCETFGWDVCEAADIFDYDEDTGCRPGAPTARAGFEEVASWLFLEENANEVLFLKLDSSLNDEDETVSTIVSDVFGEDVIFSPTD---WEEFSGSDDWPSPAELVAMGTRVIIAGS--ESSTLVFS----TDSDAV--EVLISAEDFDTSECADVEGFP------EPSWYRVQGDMVEYRLDRANSTIFELVPGSDEALTSSMTDNVMNCGFTPTFDRLDADLMESTIWSWDTDRPETGFDLPRAAVISSDGGRWTD---VETDSDSGERHSFACR 356
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC8_9STRA) HSP 1 Score: 154 bits (390), Expect = 6.330e-38 Identity = 115/354 (32.49%), Postives = 166/354 (46.89%), Query Frame = 1
Query: 550 CSRLHWYLCEALGIYDYGD-ATGCPNTARTLKQTFEEIAAWMDLPENSEELLFIKLETYVGNRASLLPDCITEVFGTDMVFGPLDFITWEKISGTEQWPSTEYLVSNGKRLVISSSVRENADTIFKINEYNDINGIFNEDATTAIEFRTGVPCSSRTRDPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGAADSMSALECGLIPTFDRMDSSLLEATMWSWEEGEPHAYFSSARA-AVAHQET-GRWTSGSALANEEESDEVHSYACRDDSSGERGEWVVSNGAAGYFGAAELVCLAQGLVFGCPRTAKENAALRESMTNAKVESVWLNLLSSGGESSSTWARESGVAYSL 1602
CS + W C A G+ D+G AT C A T + I+ W++LP NS+E L +KLE+Y L+ D I V G + V+ +F+ + G WP+ LV+ GK +V +S + E + + + E+ ++ P + ++R QG+A + + L+ P +F A A+ CG IPTFDR+D LL +T+WSW E P AVA+ T GRWT L D+ + YAC ++ +RG W VS G G G VC A G VFG P +A ENA L +M A V W+N+ S+ W E+G Y L
Sbjct: 4 CSNIGWKTCNACGVPDFGPTATTCRADAPTFRTQLLIISEWLNLPGNSKEFLVVKLESYSNGHEQLISDEIGLVIGAERVYSAEEFV----VDGAV-WPTVGDLVARGKNIVFAS-ILEQSMLVLAMEEH-------------VVKPNQLTPLCNGLYPTGFNRAQGDAVSIQLTVNGDVLFSDPPDPTDFLSAELVPEAMNCGFIPTFDRLDPPLLASTIWSWAENAPAQPLPPPNTCAVANALTNGRWTDVPCLG-----DQQYYYACV--AAADRGAWSVSAGQGGGLGGDVPVCAA-GSVFGAPTSAVENALLVAAMNQAGVLLAWVNVHSNAF---GCWIAENGRPYCL 327
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZCR4_FONAL) HSP 1 Score: 87.0 bits (214), Expect = 4.990e-14 Identity = 71/232 (30.60%), Postives = 102/232 (43.97%), Query Frame = 1
Query: 238 NTSPWLLRASALQRFLGYDMPLDQVPMIATHNSYNTEEDGVS----------IEWEVVP-NQVYSLTQQLSCLGVRGLELDVHFVEELARDGASEDEATLVCHTHSSYALEIQAACSRLHWYLCEAL-GIYDYGDATGCPNTARTLKQTFEEIAAWMDLPENSEELLFIKLETYVGNRAS------LLPDCITEVFGT--DMVFGPLDFITWE-----KISGTEQWPSTEYL 858
+ S WL Q L D PL +P I HN+Y + S + V+P NQV SLT+ L +GVR LELDVH+V L + L CH + A A C L G +D G TGC +++ +EIA+W+ P N +E++F+++E + + LL + V GT DM+F P D W+ + + WPS L
Sbjct: 120 HASQWLASTVRFQGHLARDEPLHLLPHICAHNAYGSYSRLASRTRFWIQSPLLGGGVIPHNQVLSLTELLE-VGVRRLELDVHYVPGLLPHAPGLEPLRL-CHGGRAAAQLCPAVVGAFPMLSCRDLTGYFDLGHHTGCTPESQSWHGGLQEIASWLKDPRNRDEIVFLEIEDIMQGASEEEFLGPLLAAFTSGVGGTPGDMLFRPADLAAWQATQISSATAMQHWPSHNQL 349
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RT06_PHYIN) HSP 1 Score: 82.8 bits (203), Expect = 1.060e-12 Identity = 114/474 (24.05%), Postives = 178/474 (37.55%), Query Frame = 1
Query: 247 PWLLRASALQRFLGYDMPLDQVPMIATHNSYNTEEDGV---------------SIEWEVVPNQVYSLTQQLSCLGVRGLELDVHFVEELARDG-------ASEDEATLVCHTHSSYALEIQAACSRLHWYLCEALGIYDYGDATGC--------PNTARTLKQTFEEIAAWMDLPENSEELLFIKLETYVG--NRASLLPDCITEVFGTDMVFGPLDFITWEKISGTEQWPSTEYLVSNGKRLVISSSVRENADTIFKINEYNDINGIFNEDATTAIEFRTGVPCSSRTRDPSWSRVQGNAATFMIEYTDLTLYEFRPTAEEFFGAADSMSALECG-----LIPTF----------DRMDSSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACRDDSSGERGEWVVSNGAAGYFGAAELVCLAQGLVFGCPRTAKENAALRESMTNAKVESV 1527
PW+ RA QR L Y L + ATHNS T+ G + + NQ +L+ QL LGVR LELDVHF R A D+A + L+ S + W + GC + R ++ EIA W+ + +L+ ++ VG +++ L + T +FG D++F P DF + G + + L+S GK++++ ++ N D +F + E VP SS ++ NA + + + + Y + G A+ +A E G +P F D +D +++ A +WSW + EP +A A GRW Y D SS V +N + A+ +G G PR A ENAAL +T + E+V
Sbjct: 417 PWVARAITYQRNLTYSETLCYAELPATHNSVITQAHGYGNRDQLFNARLNASNAASYMRTSNQFLTLSDQLD-LGVRFLELDVHFFASSLRSAHCSDSGVAFVDDAASALVSSLESVLDASGQDSTVQWG----------SELVGCLPSLSGIRADEQRLHNESLGEIATWLSSHPDDLVVLYTEIGDEVGTYSQSEALLELYTTIFG-DLLFSPSDF---DDAGGDWNGFTLQELISQGKQVILVTTPEAN-DQMFYMREL--------------CAGWADVPSSSTGASGTFFGESMNAGSLVRVFKSVLHYATLTESAMSGGGAEVDTASEPGHVNASTLPVFVDAGVNILAPDGLDGAIMTAMVWSWAKNEPDV--DTATAVQLSAADGRW-----------------YGVADSSSISHVACVSNNNRTTWQVVAQGSSCPEGYATGAPRLAVENAAL---LTVLQTETV 838
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Match: C-type (lectin domain-containing protein n=3 Tax=Stigmatella TaxID=40 RepID=A0A1H7R1T0_STIAU) HSP 1 Score: 79.7 bits (195), Expect = 5.230e-12 Identity = 121/501 (24.15%), Postives = 196/501 (39.12%), Query Frame = 1
Query: 223 QQQSPNTSPWLLRASALQ-RFLGYDMPLDQVPMIATHNSYNTE---EDGVSIEWEVVPNQVYSLTQQLSCLGVRGLELDVHFVEELARDGASEDEATLVCHTHSSYALEIQAACSRLHWYLCEALGIYDYGDATGCPNTARTLKQTFEEIAAWMDLPENSEELLFIKLETYVGNRAS---------------LLPDCITEVFGTDMVFGPLDFITWEKISGTEQWPSTEYLVSNGKRLVISSSVREN--------------ADTIFKINE--YNDINGIFNEDATTAIEFRTGVPCSSRTRDPSWSRVQGNAATFMIEYT---DLTLYEFRPTAEEFFGAA------DSMSALECGLIPTFDRMD-------------SSLLEATMWSWEEGEPHAYFSSARAAVAHQETGRWTSGSALANEEESDEVHSYACR------DDSSGERGEWVVSNGAAGYFGAAELVCLAQGLVFGCPRTAKENAALRESMTNAKVESVWLN 1536
Q+Q W +A+ +Q R L ++PL++ + THNS+ + + G + + NQ SL+ QL +G+R L LDV+ + + G S VC H + W ++ + D EIA W++ P+N +E+LF+ LE Y + A+ +P D++F P+D ++ +WP+ LV GKR+VI+ R D +F +N Y + + A A F G S+ RD + GN +++T +L + + T + + D +A++CG D+ + S L+ +WS+ EGEP+ A + GRW S +AC+ D +S W +S+ A G+ +A L QG FG P+ EN LRE + N E VWLN
Sbjct: 34 QEQPALADTWAAKAARIQQRDLQSNVPLNRWQRLGTHNSHVSTPYTKCGAGLCYYARANQHRSLSAQLD-MGIRTLMLDVY--DHGCQWGWS------VCFGHEGEQF--------VQW----SVSLED-------------------EIAQWINAPQNRDEVLFLILEDYFNDDANKRRFFGELRYRLDRDYVPGAPVSTTSGDLIFRPVD----KERLFPSRWPTPAELVQQGKRIVIAVKDRSKYEVSLSAEGYAGPMKDWLFSVNSVGYPSVQYPWYS-ANFAPSFDGGRCGSADIRDGA-----GNVQPLGLQFTQFEELKICDHFETCSGLYDTSLFSKRLDVKAAVDCGFSVAMDQAEGDPGYQGQGYDYYSRTLKQAIWSFAEGEPNDAGGDEDCAQMRPD-GRWNDLSC------GGASRRHACKKKDTTCDAASCPSDFWTLSSSAGGW--SAGLTACPQGYAFGVPQNGYENRKLRERIGN---EDVWLN 472 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig96.17616.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig96.17616.1 >prot_E_fasciculatus_S2_contig96.17616.1 ID=prot_E_fasciculatus_S2_contig96.17616.1|Name=mRNA_E_fasciculatus_S2_contig96.17616.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=637bp MSDPVRGLREGASRASGSERQKAADSVEPRGWRRRRRRRQRTGAASSATSback to top mRNA from alignment at E_fasciculatus_S2_contig96:8782..21165- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig96.17616.1 ID=mRNA_E_fasciculatus_S2_contig96.17616.1|Name=mRNA_E_fasciculatus_S2_contig96.17616.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=12384bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig96:8782..21165- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig96:8782..21165- >mRNA_E_fasciculatus_S2_contig96.17616.1 ID=mRNA_E_fasciculatus_S2_contig96.17616.1|Name=mRNA_E_fasciculatus_S2_contig96.17616.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1911bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig96:8782..21165- (Ectocarpus fasciculatus EfasUO2)back to top |