mRNA_E_fasciculatus_S2_contig9591.17610.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWM4_ECTSI) HSP 1 Score: 583 bits (1502), Expect = 4.400e-201 Identity = 305/348 (87.64%), Postives = 317/348 (91.09%), Query Frame = 1
Query: 31 MLDVSLEVLAATCARRVAGDKLEEASEALRNAQDARAELEQXXXXXXXXXXXXXXXXVAEKAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQRRRIS 1074
MLDVSLEVLAATCARRVAGDKLEEASEALRNAQ+ARA+LEQ +AEK KAE VAPRWI DDQSN TEFG KY+ELP N+ +L+AVIEDLTEDLSGSVHNPQVI KYQKLKEETE RKALSELVEGNLNANERMNSIRTPW+EKLQDMVAQLN+LFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLN RVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDIT+IVI NGVNTIKGTEEHSM+K IAAKKRQ AL +GDAQGNGPQQRRRIS
Sbjct: 1 MLDVSLEVLAATCARRVAGDKLEEASEALRNAQEARADLEQKVKELKAQKSQYHKQFLAEKRKAEHVAPRWIDDDQSNLTEFGEKYSELPDNVLQLDAVIEDLTEDLSGSVHNPQVIKKYQKLKEETETARKALSELVEGNLNANERMNSIRTPWKEKLQDMVAQLNELFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNARVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITVIVIMNGVNTIKGTEEHSMQKFIAAKKRQRALKDGDAQGNGPQQRRRIS 348
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJB3_9PHAE) HSP 1 Score: 591 bits (1523), Expect = 2.660e-193 Identity = 310/358 (86.59%), Postives = 324/358 (90.50%), Query Frame = 1
Query: 1 VKKAQEHASAMLDVSLEVLAATCARRVAGDKLEEASEALRNAQDARAELEQXXXXXXXXXXXXXXXXVAEKAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQRRRIS 1074
+K+AQE ASAML+VSLEVLAATCARRVAGDKLEE SEALRNAQDARA++EQ +AEK KAE VAPRWI DDQSN TEFG KY ELP N+ +L+AVIEDLTEDLSGSVHNPQVI KYQKLKEET+ TRKALSELV GNLNANERMNSIRTPW+EKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGK+AVLN RVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVI NGVNTIKGTEEHSM+K IAAKKRQ AL +GDAQGNGPQQRRRIS
Sbjct: 774 LKEAQEQASAMLEVSLEVLAATCARRVAGDKLEETSEALRNAQDARADMEQKVKELKAKKSQFHKQFLAEKKKAEHVAPRWIDDDQSNLTEFGEKYGELPDNVLQLDAVIEDLTEDLSGSVHNPQVIQKYQKLKEETDTTRKALSELVAGNLNANERMNSIRTPWKEKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKVAVLNARVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIMNGVNTIKGTEEHSMQKFIAAKKRQRALQDGDAQGNGPQQRRRIS 1131
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDV9_9PHAE) HSP 1 Score: 322 bits (826), Expect = 1.710e-101 Identity = 175/220 (79.55%), Postives = 184/220 (83.64%), Query Frame = 1
Query: 397 LKEETEATRKALSELVEGNLNAN--ERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNG 1050
LKEET A RKALSELVEGN NAN +RMNSI PW+EKLQ +V +LNDLF EYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGK+AVLNQRVHS GERSVST LFLMALQDLQHSPFR V FSRIVLNSCGPSRKQY LITP+LLQGLVAM+NDD+TIIVI NGVNTIKGTEEHSMK LIAAKKRQ AL + AQ NG
Sbjct: 18 LKEETVAVRKALSELVEGNANANASKRMNSINAPWKEKLQCVVDRLNDLFMEYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKVAVLNQRVHSWGERSVSTTLFLMALQDLQHSPFRAV---------------FSRIVLNSCGPSRKQYILITPQLLQGLVAMENDDVTIIVIMNGVNTIKGTEEHSMKNLIAAKKRQRALRDLGAQENG 222
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC8_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.990e-55 Identity = 110/238 (46.22%), Postives = 148/238 (62.18%), Query Frame = 1
Query: 292 ELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRL---AEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLI 996
+ P N++ +E I V NP+VIN+Y + L L + N ++ ++R P+ +L+ + +LN F YM +M GCGGEV L + + KWGI I+VRFR+ D + +L++ +HSGGERSVSTIL+LMA+QDLQ SPFRVVDE+NQGMD NER VFSRIV NSC KQ+FLITPKLLQGL+AMDN +T+ I NG + + G SM+ L+
Sbjct: 7 QYPDNVDIVEEEINTCEXXXXNCVDNPEVINRYNAGLARITELEQRLEILNDSNEEEARKVAAVRNPFVTRLEHTINELNKRFSAYMEQM-GCGGEVELLNKGDTYGDYGKWGIAIKVRFRNRTDEDMLKILDKEIHSGGERSVSTILYLMAMQDLQSSPFRVVDEVNQGMDAHNERLVFSRIVRNSCRTDCKQFFLITPKLLQGLIAMDNPFVTVHFILNGPHALNGQHPFSMRDLV 243
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CV35_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.150e-53 Identity = 124/294 (42.18%), Postives = 175/294 (59.52%), Query Frame = 1
Query: 211 KAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNME------ELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSC----GPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQR 1062
K + E+ A + D N TE G++ +L G++E ELEA +ED NP VI KYQ+ K E K LS++ + + + ++ W +++ ++ +N LF EYM+ + G G V + ED+S + KWG++I++ FR + G+M L++ HSGGERSV+TI+FLMALQD SPFRVVDEINQGMD NERQVF RIV NS GP R QYFLITPKLLQGL AM+ +D+T+ + NG IK + ++ + I +K +N A G+ Q+R
Sbjct: 23 KIETEEFARLY--DAAGNCTELAGRFAQLSGDLENLETRGELEAQMEDEQNSADAIHDNPAVIEKYQQRKIEISDHEKKLSQMRRTHEDIVKSFEPMKANWEGRIRALIKVVNGLFSEYMAAL-GNRGNVYILEDKS-YDKWGLDIKICFRQD---GEMQTLHKNFHSGGERSVATIMFLMALQDSVISPFRVVDEINQGMDEPNERQVFKRIVENSIDKPNGPLRPQYFLITPKLLQGLTAMEKEDVTVHFVMNGPYNIKDYRDWNIPRFIKKRKE----LNSGAAGSSKQRR 305
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUQ7_9STRA) HSP 1 Score: 197 bits (502), Expect = 3.420e-52 Identity = 114/262 (43.51%), Postives = 161/262 (61.45%), Query Frame = 1
Query: 268 TEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDE-SSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKK--RQLALMNGDAQG 1044
TE K NELP ++A++E+ + NP+VI YQK +E EA K L+EL + ++ W +++ +V +LN F YM + G + R+ D+ +++K+WGI+I V FR G ++ VL + SGGERSVSTI++LMALQD+ SPFRVVDEINQGMD +NER VF RIV NS GP QYFLITPKLLQGL AM++DD+T++V++NG I+ + +K I ++ ++ L NG G
Sbjct: 163 TELKAKLNELPAVTATVQAMLEEAQNAALSIIDNPEVIQHYQKRLKEIEANEKELAELRTAADSHTGGYQDLKAAWEARIERLVTKLNGRFEVYMRSL---GNQGRIEMDKGATYKEWGIKILVSFRQ---GLELEVLRKNFQSGGERSVSTIMYLMALQDMVRSPFRVVDEINQGMDERNERIVFRRIVENSTGPESPQYFLITPKLLQGLTAMEHDDVTVLVVFNGPWNIRKHTDWDLKSFIEKRRAGKRARLTNGGEAG 418
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U763_9STRA) HSP 1 Score: 192 bits (488), Expect = 6.420e-51 Identity = 121/324 (37.35%), Postives = 177/324 (54.63%), Query Frame = 1
Query: 211 KAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLA-----------EDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSR---------KQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQRRRIS*PNPSSTCLGSLLEDG 1122
+AKA ++ D N K ELP + E+EA +++ T ++ + NP+V+ +Y++ K E TR+ L L + ++ PW L++ V ++N LF +YM+++ G GEVRLA E+ESSF+ WGIEIRV+FR ++ + L+ VHSGGERSVSTI++LMALQ+L SPFR VDEINQG+D +NER VF RIV NS P + QYFLITPKLL L M+N+D+T++ I+NG + + + K + G ++ G + + N SS +DG
Sbjct: 25 RAKATEMV------DIHNDPVMRAKLEELPETLPEVEAALDEATLKVNSTTDNPEVLVQYEQRKREIVETREELEGLSHAQDAKRVNLEKMKDPWESALKNTVTKVNTLFEKYMTEL-GFAGEVRLAKGEPISGEDGGEEESSFEDWGIEIRVKFREKSS---LQTLSAHVHSGGERSVSTIMYLMALQELMVSPFRCVDEINQGLDERNERLVFRRIVANSTQPPKIPSDPLSHAGQYFLITPKLLPNLTDMENEDVTVLFIFNGPFNFRHFSDWNPDKFV----------KGISETPGDEGEDNLDNNNSSSKATKHSYDDG 328
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CV33_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.860e-49 Identity = 124/294 (42.18%), Postives = 175/294 (59.52%), Query Frame = 1
Query: 211 KAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNME------ELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSC----GPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIAAKKRQLALMNGDAQGNGPQQR 1062
K + E+ A + D N TE G++ +L G++E ELEA +ED NP VI KYQ+ K E K LS++ + + + ++ W +++ ++ +N LF EYM+ + G G V + ED+S + KWG++I++ FR + G+M L++ HSGGERSV+TI+FLMALQD SPFRVVDEINQGMD NERQVF RIV NS GP R QYFLITPKLLQGL AM+ +D+T+ + NG IK + ++ + I +K +N A G+ Q+R
Sbjct: 553 KIETEEFARLY--DAAGNCTELAGRFAQLSGDLENLETRGELEAQMEDEQNSADAIHDNPAVIEKYQQRKIEISDHEKKLSQMRRTHEDIVKSFEPMKANWEGRIRALIKVVNGLFSEYMAAL-GNRGNVYILEDKS-YDKWGLDIKICFRQD---GEMQTLHKNFHSGGERSVATIMFLMALQDSVISPFRVVDEINQGMDEPNERQVFKRIVENSIDKPNGPLRPQYFLITPKLLQGLTAMEKEDVTVHFVMNGPYNIKDYRDWNIPRFIKKRKE----LNSGAAGSSKQRR 835
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPY6_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.030e-49 Identity = 112/287 (39.02%), Postives = 167/287 (58.19%), Query Frame = 1
Query: 211 KAKAEQVAPRWIGDDQSNPTEFGGKYNELPGNMEELEAVIEDLTEDLSGSVHNPQVINKYQKLKEETEATRKALSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESS------FKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSC-------GPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEEHSMKKLIA---AKKRQLAL 1023
K +AEQ AP + Q P + + ELP ++EE+ A IE+ + G +NP V+ +Y ++ + EA ++ G N ++ + W+ K+++ + +++ F +YM ++ C GEV L+ +++ FK WG+EIRVRFR G + VL+ + HSGGERSVSTI+++MALQ+L SPFR VDEINQG+D +NER VF RIV NS QYFLITPKLL L MDN +T +V++NG K + ++ KL+ +KKR + L
Sbjct: 16 KEQAEQHAPLYDSSGQELPLKE--QLEELPESVEEVGAAIEECRTKMQGMENNPGVLQEYGRILRDIEAAEAERDKVANGVSNNKTKLERLLHTWKSKMENTIKEVDSKFSKYMQDLN-CAGEVVLSGSDNAEIGTYNFKNWGVEIRVRFRQ---AGTLQVLSAQRHSGGERSVSTIMYMMALQELMSSPFRCVDEINQGLDERNERLVFKRIVQNSTLAPGAVPNDHSGQYFLITPKLLPNLEGMDNPRLTALVVFNGPYNFKDCRDWNVPKLVERAESKKRSVEL 296
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Match: Structural (maintenance of chromosomes protein 5 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTJ1_HETAK) HSP 1 Score: 182 bits (462), Expect = 3.070e-46 Identity = 105/208 (50.48%), Postives = 141/208 (67.79%), Query Frame = 1
Query: 361 VHNPQVINKYQKLKEETEATRKA---LSELVEGNLNANERMNSIRTPWREKLQDMVAQLNDLFREYMSKMDGCGGEVRLAEDESSFKKWGIEIRVRFRSEADGGKMAVLNQRVHSGGERSVSTILFLMALQDLQHSPFRVVDEINQGMDPKNERQVFSRIVLNSCGPSRKQYFLITPKLLQGLVAMDNDDITIIVIYNGVNTIKGTEE 975
V NP+V+ KYQ E ATR+A L EL+E + + R + W K++ VA+LN F++YM++M+ GG V L + + ++ + I+I+V +R G + VL+ RV+SGGERSV+T+++LMALQD+ SPFRVVDEINQGMD +NER VFSRIV N CG R QYFLITPKLLQGLVAMD+ D+ VI NG IK ++
Sbjct: 249 VDNPEVLRKYQ---ENVAATRRAEAQLQELIEAAQSRDARFGETKVKWERKVETAVARLNQHFKKYMNQMN-YGGAVELFKT-AGYENFAIQIKVSYRQ---GEPLKVLDGRVNSGGERSVATVIYLMALQDMISSPFRVVDEINQGMDERNERMVFSRIVRNCCGDRRPQYFLITPKLLQGLVAMDHPDVRAHVICNGPWNIKNCDK 448 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9591.17610.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9591.17610.1 >prot_E_fasciculatus_S2_contig9591.17610.1 ID=prot_E_fasciculatus_S2_contig9591.17610.1|Name=mRNA_E_fasciculatus_S2_contig9591.17610.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=349bp MLDVSLEVLAATCARRVAGDKLEEASEALRNAQDARAELEQNVKDLKAKKback to top mRNA from alignment at E_fasciculatus_S2_contig9591:173..5884+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9591.17610.1 ID=mRNA_E_fasciculatus_S2_contig9591.17610.1|Name=mRNA_E_fasciculatus_S2_contig9591.17610.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5712bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9591:173..5884+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9591:173..5884+ >mRNA_E_fasciculatus_S2_contig9591.17610.1 ID=mRNA_E_fasciculatus_S2_contig9591.17610.1|Name=mRNA_E_fasciculatus_S2_contig9591.17610.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1047bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9591:173..5884+ (Ectocarpus fasciculatus EfasUO2)back to top |