mRNA_E_fasciculatus_S2_contig9550.17566.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4L7_ECTSI) HSP 1 Score: 551 bits (1420), Expect = 4.680e-194 Identity = 251/266 (94.36%), Postives = 265/266 (99.62%), Query Frame = 1
Query: 1 QTGEPYPYMNKPNAMQLWFDQTEIQETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPNWTHWDLTNICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPIDHQMDNVCDIGIEPRDIESRDVRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPMDIQESTYKV 798
+TGEPYPYMNKPNAMQ+W DQTE++ETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPNWTHWDL+NICP+++LCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINN+AIENEKVDYELWDP+DHQMDNVCDIGIEPRDI+SR+VRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPM+IQESTYK+
Sbjct: 243 ETGEPYPYMNKPNAMQIWLDQTEVEETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPNWTHWDLSNICPDDALCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNYAIENEKVDYELWDPVDHQMDNVCDIGIEPRDIKSRNVRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPMNIQESTYKM 508
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD89_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.770e-41 Identity = 94/256 (36.72%), Postives = 128/256 (50.00%), Query Frame = 1
Query: 4 TGEPYPYMNKPNAMQLWFDQTEIQETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTHWDLTNICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPIDHQMDNVCDIGIEPRDIESRDVRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPP 768
TG Y + NKP + W + I+ALIDPD FL+PLT L+ +V D + E L G KG PA Q +GL + W ++ IC S C ++ A R + + PPY+ H DDW+RL WV PKVYE YP LLAE AY+ AAA ++ H+R+N+ + N E W P+ + +VC + P S + LP FIH C Y VG++ F+KR + CD L PP
Sbjct: 184 TGREYHFYNKPRGILHWLTHGRPEADIIALIDPDQFFLRPLTPDLAGVPNLVVTDPVKKETLPTRIG----KGAPAAQFYGLGDRWLRFNREYICGAGSPCLEATSRDAWRSFTVGPPYILHVDDWKRLARSWVDFVPKVYEEYPHLLAEMYAYSLAAAHEELPHFRVNHLMVSNVGSYGEGW-PLVDSLPSVCADALRP---SSNTSSAASMLPTFIHACQSYHVGRFRFSKRALPTDKFSS---CDAEFLHEPP 428
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZM89_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.090e-39 Identity = 92/241 (38.17%), Postives = 132/241 (54.77%), Query Frame = 1
Query: 4 TGEPYPYMNKPNAMQLWFDQTEI---QETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLEN-GGWVRKGYPAGQRFGL-PNWTHWDLTNICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPIDH-QMDNVCDI-GIEPRDIESRDVRSFDRLPNFIHYCHMYRVGQWLFNKRR 705
TG+ Y + NKP M+ + + I + I+ALIDPDF FL+P + + V D L + + + +V +G PAGQ++GL +W +D IC S C TS A+R+Y + PPY+ H +D+R+L P W AP+VY YP LLAE AY AAA L M H R+N++ + N V E W +D + + C G + ++ R LP F+HYC YRVG ++F KRR
Sbjct: 181 TGKSYHFYNKPRGMEHFLNDRSIDFERAPIIALIDPDFAFLRPFS------DRVAGPDALVIAPWRADELPAFVTEGTPAGQQYGLGTHWLTFDRRKICGAGSPCLETSRRDAERHYPIGPPYVLHHNDFRKLAPVWREFAPRVYAQYPDLLAEMYAYCMAAAHLRMPHARVNHWMLSNVHVGDEGWRHLDALALRDACPARGGKTPNVVDHATRFV--LPAFLHYCQNYRVGDFIFAKRR 413
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDZ4_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.800e-39 Identity = 91/274 (33.21%), Postives = 134/274 (48.91%), Query Frame = 1
Query: 16 YPYMNKPNAMQLWFDQTEI---QETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGL-PNWT------HWDLTNICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPIDHQMDNVC----DIGIEPRDIESRDVRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPMDIQESTYK 795
Y + NKP +Q W E TIV +IDPD I L+P+ + + + E + V G P Q +GL W H++ T++C S C T+T+ ++++ + PPY+ +DD +L+ W A P+VYE YPSLLAE AY+ AAA D+ H+ ++N + N + E W ID DNVC D + P + +P+ +HYC YR G+ F KRR +KE CD PM+ P D+ + YK
Sbjct: 73 YDFYNKPYGVQHWLVNAEPPVPSGTIVNIIDPDMIILRPMVPQIKGNPANIFMNRFKPETDFIPEK--VAHGMPVAQLYGLGAPWAQKAPHKHFNRTHVCGAGSPCLDTTTSFGEQHFSVGPPYMVEKDDLLKLVNSWTAMVPRVYEKYPSLLAEMYAYSMAAAHTDLPHFTLHNLMVSNVHAEDEGWPWIDQLEDNVCAKPVDGVLYPTKV----------MPSVLHYCQFYRAGEMGFQKRRIKKEL----FSCDQPMMLELPADLGKVNYK 330
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU90_ECTSI) HSP 1 Score: 151 bits (381), Expect = 5.630e-39 Identity = 91/266 (34.21%), Postives = 137/266 (51.50%), Query Frame = 1
Query: 1 QTGEPYPYMNKPNAMQLWFDQTE--IQETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTHWD----LTNICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVD-YELWDPIDHQMDNVCDIGIEPRDIESRDVRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPMD 774
+TGE + + NKPN M + + + E +VAL+DPD IF+ PLT ++ + ++ DG + EG WV +G P GQ +GL WT WD +T E+S ST A Y + PPY+ H DW R+L WVA +PKV++ +P +LAE + AAA + ++H + + + E W +D +VCD P ++ R LP +HYC MYRVG +++ KR ++ + C + LE PP D
Sbjct: 154 ETGERFMFYNKPNGMAHYLKSADYPVHEAVVALVDPDMIFMSPLTPFVGDADKMLWHDGDAGEGPD-----WVEEGSPVGQYYGLGGVWTTWDDLREITENLGEDSPARAVSTEEAISGYPVGPPYMMHPRDWARVLDLWVALSPKVHKGHPGILAEMYGFCIAAAHIGLRHRVAYGLMVSDAGMPGKEGWPLVDQMGTSVCD----PESVDHRR----GSLPPIVHYCQMYRVGTFMWGKRHRTHQTFFG---CHSDSLELPPPD 403
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA7_AURAN) HSP 1 Score: 148 bits (373), Expect = 2.760e-38 Identity = 85/248 (34.27%), Postives = 125/248 (50.40%), Query Frame = 1
Query: 4 TGEPYPYMNKPNAMQLWFDQTEIQ---------ETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTHWDLTNICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPIDHQMDNVCDIGIEPRDIESRDVRSFDRLPNFIHYCHMYRVG----QWLFNKRR 705
+G+ Y + NKP ++ W + + +VALIDPDFIFL+PLT +S ++ + V++G P GQ +GL + W +DL IC S CA ++ A RYY + PPY+AH+DD ++ W P+V+ YP LLAE AY+ AAA L + H R++++ + N E W ID + CD+ + R DV P F+HYC YR + +F KRR
Sbjct: 103 SGKDYKFYNKPYGLRHWLGAGKGHWLARADLGDDAVVALIDPDFIFLRPLTADVSNASAILASAPVDAAAAAARFRR-VKRGQPVGQFYGLGDGWLKFDLGKICGAKSRCANVTSAEAWRYYSVGPPYIAHRDDLAKIADRWCEYVPRVFAQYPELLAEMYAYSMAAADLGLPHLRLDHYMVSNVNAYGEAWPWIDGAATSSCDVTLPQRLWPGHDV------PVFVHYCQGYRFPDAERELVFGKRR 343
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T637_9STRA) HSP 1 Score: 147 bits (372), Expect = 7.810e-38 Identity = 88/269 (32.71%), Postives = 140/269 (52.04%), Query Frame = 1
Query: 4 TGEPYPYMNKPNAMQLWFDQTEI---QETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTHWDLTNICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPIDHQMDN-VCDIGIEPRDIESRDVRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPMDIQESTYK 795
+G+ Y + NKP +Q W D ++ IVAL+DPDF+F++PLT + + V+ ++ +G ++ VR+G+P Q +G+ + WT + + I ++S + S + A RYY + PY+AH D R++ W P+VYE YP LLAE AY+ AAA L R++++ + N + E W +D D VC + E P F+HYC YRV W F+KRR C +P+ PP D++++ +K
Sbjct: 162 SGKSYDFYNKPYGLQHWLDSKAAPKHKDAIVALLDPDFLFMRPLT-YKVKQDRVLYSPPVT-DGDLIDE---VREGHPVAQYYGIGSQWTKFKVEYIAGKDSPASKVSISDASRYYSVGAPYIAHVKDMRKIAESWANFVPRVYEEYPHLLAEMYAYSIAAAHLXXXXXRLDHYMVSNTQAAGEGWPFVDRLTDKYVCSAEAPDQGQEQ---------PVFLHYCQFYRVEHWGFHKRRVATNL----FTCKSPLFIMPPEDLEDTHWK 412
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPB4_9STRA) HSP 1 Score: 145 bits (366), Expect = 6.540e-37 Identity = 91/276 (32.97%), Postives = 140/276 (50.72%), Query Frame = 1
Query: 4 TGEPYPYMNKPNAMQLWFDQTEIQ---ETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGL-PNWTH-----WDLTNICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPIDHQMDNVCDIGIEPRDIESRDVRSFDRLP--NFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPMDIQESTYKV 798
T + Y + NKP M+ W + TI+AL+DPD IF++PL + +++ G+ E E + G+P Q +GL WT+ ++ IC E S C + + +Y + PPY+AH+ D+ R++ W P+VYE YP LLAE AY+ AAA + H +++N+ + N + E W +D + VC + P D + LP IHYC YRVG+ F KRR ++ C++PM+ PP D+ +TYKV
Sbjct: 159 TNKKYDFYNKPWGMKHWLENAVPAIPPNTIIALLDPDMIFVRPLGPQIRGDISLLTDRGIKDE----EIVDVIGLGHPVSQTYGLGAPWTNDNHKKFNRGKICGEGSPCLQVNMRYGELHYSVGPPYIAHRSDFIRIVESWTTFVPRVYEDYPYLLAEMYAYSMAAAHEKLPHVQVDNYMVSNTQAGGESWPHVD-SLPQVC---VPP----DEDGHFYAGLPMTTVIHYCQNYRVGELGFQKRRV----PHNIFSCESPMMVEPPTDLAAATYKV 418
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B353_9STRA) HSP 1 Score: 137 bits (346), Expect = 8.890e-37 Identity = 70/184 (38.04%), Postives = 104/184 (56.52%), Query Frame = 1
Query: 16 YPYMNKPNAMQLWFDQTEIQETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTHWDLTNICPE-NSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPID 561
Y + NKP W + +++ ++ALIDPD FL+PLT W+ ++ + + LE + L V +G+P GQ +GL + W ++ + IC +S C T A RYY + PPY+ H +DWRR+ WV P+VYE YP LLAE AY+ AAA ++ H R+N+ + N E WD +D
Sbjct: 1 YHFYNKPRGTLHWLEHGKVEGDVIALIDPDNFFLRPLTVWVKNETNLIVTNPVKLEEVPLR----VSEGFPVGQFYGLGDQWVRFNRSYICGSPHSPCTTVLPKDAWRYYTVGPPYILHVNDWRRVARSWVEFVPRVYEEYPKLLAEMYAYSMAAAHNNLPHTRVNSHMVSNVDAYGEGWDHVD 180
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI64_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.130e-35 Identity = 91/271 (33.58%), Postives = 130/271 (47.97%), Query Frame = 1
Query: 4 TGEPYPYMNKPNAMQLWFDQTE--IQETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLSLEGLKLENGGWVRKGYPAGQRFGLPN-WTHWDLTN--ICPENSLCATTSTTAAKRYYDLIPPYLAHQDDWRRLLPEWVAQAPKVYEMYPSLLAEQTAYATAAATLDMKHYRINNFAIENEKVDYELWDPIDH-QMDNVCDIGIEPRDIESRDVRSFDRLPNFIHYCHMYRVGQWLFNKRRYRKESDYDQLQCDTPMLETPPMDIQESTYKV 798
TG YPY NKP MQ + I TIVA++DPD +F+KPLT +L P +T + D ++ L+ + +GYPA QR+GL + W WD + E S T A +Y + PPY+AH DW ++ +WV P+ YP LL+E A A+A L + H + F + N E W ID D VC+ P LP IHYC +RVG + + K + + + +CD+P L PP + K+
Sbjct: 116 TGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFLDP-DTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGLGRIVQDEKSPALTVDPQLADDHYPIGPPYVAHVRDWLKMADKWVEFMPRSLIEYPHLLSEMFALCIASAHLRLPHTVVRTFMVSNADDGNEGWPLIDKLSEDEVCNAHNAP---------DTSALPVVIHYCQHFRVGIYSWGKWEPKLQ---ELFKCDSPYLLEPPDHLASLRIKI 373 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9550.17566.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9550.17566.1 >prot_E_fasciculatus_S2_contig9550.17566.1 ID=prot_E_fasciculatus_S2_contig9550.17566.1|Name=mRNA_E_fasciculatus_S2_contig9550.17566.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=258bp MNKPNAMQLWFDQTEIQETIVALIDPDFIFLKPLTTWLSPTETVVKGDGLback to top mRNA from alignment at E_fasciculatus_S2_contig9550:38..4926+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9550.17566.1 ID=mRNA_E_fasciculatus_S2_contig9550.17566.1|Name=mRNA_E_fasciculatus_S2_contig9550.17566.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4889bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9550:38..4926+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9550:38..4926+ >mRNA_E_fasciculatus_S2_contig9550.17566.1 ID=mRNA_E_fasciculatus_S2_contig9550.17566.1|Name=mRNA_E_fasciculatus_S2_contig9550.17566.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=774bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9550:38..4926+ (Ectocarpus fasciculatus EfasUO2)back to top |