mRNA_E_fasciculatus_S2_contig9517.17546.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9517.17546.1
Unique NamemRNA_E_fasciculatus_S2_contig9517.17546.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: Orotidine-5'-phosphate (decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU0_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 5.120e-125
Identity = 193/202 (95.54%), Postives = 199/202 (98.51%), Query Frame = 1 
Query:    1 SRVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKDPAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            SRVEEVDSLLMVGLDPHAAELGEGNN+AAGAKAFCLRIIA+TSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASG FE LGAHAITLNAYMGVDTV+PFLKDPA+GVFVLCKTSN+SSNELQTLPVG+SGKALFEEVASLCQSWNKDNNVGLVVGATD EALARVRAAAPDLWILAPG
Sbjct:   18 SRVEEVDSLLMVGLDPHAAELGEGNNHAAGAKAFCLRIIASTSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGTFEELGAHAITLNAYMGVDTVDPFLKDPARGVFVLCKTSNRSSNELQTLPVGNSGKALFEEVASLCQSWNKDNNVGLVVGATDPEALARVRAAAPDLWILAPG 219
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: OMPdecase (domain-containing protein n=38 Tax=Phytophthora TaxID=4783 RepID=H3G5G5_PHYRM)

HSP 1 Score: 254 bits (649), Expect = 3.030e-80
Identity = 137/203 (67.49%), Postives = 158/203 (77.83%), Query Frame = 1 
Query:    1 SRVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKD-PAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            +RV  VDSLL VGLDPH AEL E    AA A+ FCLR+I  T  VA  YKPN+AFFEAFGAEG+ AL  VI A+PEGIPVLLDAKRGDI TTAAAYA  AF+ L AHAITL  YMGVD+++PF++  P +G FVLCKTSN S+N+ QTLPVGS  +ALFEEVA+ C+ WN ++NVGLVVGATD +AL RVR   P LWILAPG
Sbjct:    9 ARVAAVDSLLCVGLDPHVAELPEAT--AAAAQTFCLRLIKQTQHVAAAYKPNSAFFEAFGAEGITALHAVIKAIPEGIPVLLDAKRGDISTTAAAYAVSAFDKLEAHAITLAPYMGVDSIDPFVRGHPERGCFVLCKTSNPSANDFQTLPVGS--RALFEEVAAKCEQWNSEDNVGLVVGATDIDALRRVRTVTPKLWILAPG 207
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BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: Orotidine-5'-phosphate (decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.900e-78
Identity = 134/202 (66.34%), Postives = 159/202 (78.71%), Query Frame = 1 
Query:    1 SRVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKDPAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            +R   +DSLL VGLDPH  +L +   +A+GA AFC R+I AT+ VA+ YKPNAAFFEAFGAEG+AALK+ I   P  IP++LDAKRGDIGTTA AYA  AF  LGA +IT+NAYMG DTV PF+KDP++GVFVLCKTSN SS E+Q+L +  S  A+FE+VA+L Q WN  NNVGLVVGATDA+AL R RAAAP LWILAPG
Sbjct:   36 ARARAIDSLLCVGLDPHVGQLTD--KSASGALAFCKRLIDATADVALAYKPNAAFFEAFGAEGMAALKDYI---PAEIPIVLDAKRGDIGTTAQAYADAAFTELGAESITINAYMGTDTVAPFIKDPSRGVFVLCKTSNPSSKEVQSLRLAGSNLAVFEQVAALAQGWNTANNVGLVVGATDADALRRARAAAPGLWILAPG 232
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BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: OMPdecase (domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG3_9STRA)

HSP 1 Score: 253 bits (646), Expect = 2.090e-77
Identity = 139/203 (68.47%), Postives = 158/203 (77.83%), Query Frame = 1 
Query:    1 SRVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKD-PAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            +RV  VDSLL VGLDPH AEL E +  AA A+AFCLR+I  T  VA  YKPN+AFFEAFGAEG+ AL  VI AVP GIPVLLDAKRGDI TTAAAYA  AFE L AHAITL  YMG D+++PF++  P +G FVLCKTSN S+N+ QTL VGS  +ALFEEVA+ C+ WN ++NVGLVVGATD EAL RVRA  P LWILAPG
Sbjct:   27 ARVAAVDSLLCVGLDPHVAELPEAS--AAAAQAFCLRLIEQTQHVAAAYKPNSAFFEAFGAEGITALHTVIKAVPAGIPVLLDAKRGDISTTAAAYAVSAFEKLEAHAITLAPYMGQDSIDPFVRGHPERGCFVLCKTSNPSANDFQTLSVGS--RALFEEVAAKCEQWNSEDNVGLVVGATDVEALRRVRAVTPKLWILAPG 225
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: OMPdecase (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7C1_GLOUD)

HSP 1 Score: 249 bits (635), Expect = 2.820e-77
Identity = 138/207 (66.67%), Postives = 158/207 (76.33%), Query Frame = 1 
Query:    1 SRVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKD-PAKGVFVLCKTSNKSSNELQTLPVGSS-GKA---LFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            +RV+ +DSLL VGLDPH AEL E    AA A+ FCL +IA T  VA  YKPN+AFFEAFGAEG+ AL  VI A+P GIPVLLDAKRGDI TTAAAYA  AF+ L AH+ITL  YMGVD+++PF++  P +G FVLCKTSN S+N+ QTL V SS GKA   LFEEVA  CQ WN ++NVGLVVGATD EAL RVRA  P LWILAPG
Sbjct:    9 ARVDTIDSLLCVGLDPHTAELPEPT--AAAAEQFCLNLIAQTHAVAAAYKPNSAFFEAFGAEGITALHNVIKAIPAGIPVLLDAKRGDISTTAAAYAVSAFDKLEAHSITLAPYMGVDSIDPFIRGRPERGCFVLCKTSNPSANDFQTLSVSSSNGKASRLLFEEVALKCQEWNSEDNVGLVVGATDVEALRRVRAVTPKLWILAPG 213
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: Orotidine (5-phosphate decarboxylase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACV2_PLAHL)

HSP 1 Score: 247 bits (631), Expect = 8.470e-77
Identity = 132/202 (65.35%), Postives = 159/202 (78.71%), Query Frame = 1 
Query:    4 RVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKD-PAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            RV  VDSL+ VGLDPH AEL E    AA A+AFCL +I  T  VA  +KPN+AFFEAFGAEG+ AL+ +I A+P+GIPV+LDAKRGDI TTAAAYA  AF+ L AHAITL  YMGVD+++PF++  P +G FVLCKTSN S+N+ QTL VGS  +ALFEEVA+ C+ WN ++NVGLVVGATD EAL RVR  +P+LWILAPG
Sbjct:   11 RVALVDSLVCVGLDPHIAELNEAT--AAAAQAFCLNLIEQTQHVAAAFKPNSAFFEAFGAEGITALQAIIKAIPDGIPVILDAKRGDISTTAAAYAVSAFDKLEAHAITLAPYMGVDSIDPFVRGHPDRGCFVLCKTSNPSANDFQTLSVGS--RALFEEVAAKCEQWNSEDNVGLVVGATDVEALRRVRMISPNLWILAPG 208
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CV14_PYTOL)

HSP 1 Score: 245 bits (625), Expect = 8.200e-76
Identity = 131/205 (63.90%), Postives = 156/205 (76.10%), Query Frame = 1 
Query:    4 RVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKD-PAKGVFVLCKTSNKSSNELQTLPVGSS---GKALFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            RV  +DSLL +GLDPH  EL E    AA A+AFCLR+I AT  VA  YKPN+AFFEAFGAEG+ ALK+V+ A+P GIPVLLDAKRGDI TTAAAYA  AFE L AH+ITL  YMG D+++PF++  P +G FVLCKTSN S+N+ QTL V +     + L+E+VA  CQ WN ++NVGLVVGATD EAL RVRA  P+LWILAPG
Sbjct:   10 RVHAIDSLLCIGLDPHVVELPEPT--AAAAEAFCLRLIEATHHVAAAYKPNSAFFEAFGAEGITALKKVVKAIPAGIPVLLDAKRGDISTTAAAYAVAAFEQLEAHSITLAPYMGQDSIDPFIRGKPERGCFVLCKTSNPSANDFQTLSVATGQGESRLLYEQVALKCQEWNSEDNVGLVVGATDVEALRRVRAVTPNLWILAPG 212
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: OMPdecase (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZZ5_9STRA)

HSP 1 Score: 242 bits (618), Expect = 8.260e-75
Identity = 134/203 (66.01%), Postives = 154/203 (75.86%), Query Frame = 1 
Query:    1 SRVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKD-PAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            +R +  +SLL VGLDPH +EL E    AA A+ FCLR+I  T   A  +KPNAAFFEAFGAEGVAAL  VI AVP GIPV+LDAKRGDI TTAAAYA+ AFE L AHAITL  YMG D++EPF++  P +G FVLCKTSN S+N+ QTL V  + +ALFEEVA  C  WN ++NVGLVVGATD EAL RVRA AP LWILAPG
Sbjct:    9 ARADVANSLLCVGLDPHVSELPEPT--AAAAQQFCLRLIEQTHAAAAAFKPNAAFFEAFGAEGVAALHAVIKAVPAGIPVVLDAKRGDISTTAAAYATAAFEQLAAHAITLAPYMGADSIEPFVRGRPERGCFVLCKTSNPSANDFQTLRVAPA-RALFEEVALKCAQWNAEDNVGLVVGATDVEALRRVRAVAPTLWILAPG 208
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: OMPdecase (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6U2_BRELC)

HSP 1 Score: 242 bits (617), Expect = 1.140e-74
Identity = 131/203 (64.53%), Postives = 153/203 (75.37%), Query Frame = 1 
Query:    1 SRVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKD-PAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEEVASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            +RV  VDSLL VGLDPH  EL E    A  A+AFC+ +I  T  VA  YKPN+AFFEAFGAEG+ AL  VI A+P GIPVLLDAKRGDI TTAAAYA  AFE L AHAITL  YMGVD+++PF++  P +G FVLCKTSN S+N+ QTL +GS  +AL+EEVA+ C+ WN ++NVGLVVGATD  AL RVR   P LWILAPG
Sbjct:   11 ARVSAVDSLLCVGLDPHITELPEAT--AIAAQAFCINLIQQTQHVAAAYKPNSAFFEAFGAEGITALHAVIKAIPVGIPVLLDAKRGDISTTAAAYAVSAFEKLEAHAITLAPYMGVDSIDPFVRGHPERGCFVLCKTSNPSANDFQTLSIGS--RALYEEVAAKCEQWNSEDNVGLVVGATDINALHRVRTLTPHLWILAPG 209
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PNF4_HETAK)

HSP 1 Score: 241 bits (615), Expect = 2.560e-74
Identity = 136/203 (67.00%), Postives = 159/203 (78.33%), Query Frame = 1 
Query:    1 SRVEEVDSLLMVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFGAEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAITLNAYMGVDTVEPFLKDPAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEEVASLCQS-WNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG 606
            +RV+ +DSLL VGLDPH +EL E    A GA  FC  II AT++VAV YKPNAAFFEA GAEGVAA+K VIAAVPE IPVLLDAKRGDI +TA AYA+ AF+ LGA AITL+ YMG D+V PFL+ P +G FVLCKTSN ++ +LQTLP+    + L+EEVA+L  S WN D+ VGLVVGATDA ALAR RAAAP +WILAPG
Sbjct:   16 NRVKAIDSLLCVGLDPHLSELEE--KTAEGAFNFCKDIIDATASVAVCYKPNAAFFEALGAEGVAAMKRVIAAVPEEIPVLLDAKRGDIASTAEAYAAAAFDELGADAITLSPYMGFDSVRPFLR-PGRGAFVLCKTSNPTAGDLQTLPLAKKRRLLYEEVAALVASAWNADDAVGLVVGATDAAALARARAAAPAVWILAPG 215
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9517.17546.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Orotidine-5'-phosphate5.120e-12595.54decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
OMPdecase3.030e-8067.49domain-containing protein n=38 Tax=Phytophthora Ta... [more]
Orotidine-5'-phosphate1.900e-7866.34decarboxylase n=1 Tax=Tribonema minus TaxID=303371... [more]
OMPdecase2.090e-7768.47domain-containing protein (Fragment) n=1 Tax=Notho... [more]
OMPdecase2.820e-7766.67domain-containing protein n=1 Tax=Globisporangium ... [more]
Orotidine8.470e-7765.355-phosphate decarboxylase n=1 Tax=Plasmopara halst... [more]
Uncharacterized8.200e-7663.90protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
OMPdecase8.260e-7566.01domain-containing protein n=1 Tax=Pythium brassicu... [more]
OMPdecase1.140e-7464.53domain-containing protein n=1 Tax=Bremia lactucae ... [more]
Hypothetical2.560e-7467.00protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9517contigE_fasciculatus_S2_contig9517:256..5934 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score355.1
Seed ortholog evalue2e-95
Seed eggNOG ortholog2880.D8LJU0
Preferred nameURA5
Model size606
KEGG rclassRC00063,RC00409,RC00611
KEGG koko:K00762,ko:K01591,ko:K13421,ko:K15334
KEGG ReactionR00965,R01870,R08231
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004588,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019856,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046131,GO:0046132,GO:0046134,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Exons5
EggNOG free text desc.'de novo' UMP biosynthetic process
EggNOG OGsCOG0461@1,KOG1377@2759
EC2.1.1.202,2.4.2.10,4.1.1.23
Cds size576
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9517.17546.1prot_E_fasciculatus_S2_contig9517.17546.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9517 256..5904 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842600.0252624-CDS-E_fasciculatus_S2_contig9517:255..3611696842600.0252624-CDS-E_fasciculatus_S2_contig9517:255..361Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9517 256..361 -
1696842600.040012-CDS-E_fasciculatus_S2_contig9517:1926..20181696842600.040012-CDS-E_fasciculatus_S2_contig9517:1926..2018Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9517 1927..2018 -
1696842600.054052-CDS-E_fasciculatus_S2_contig9517:2790..28921696842600.054052-CDS-E_fasciculatus_S2_contig9517:2790..2892Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9517 2791..2892 -
1696842600.0632932-CDS-E_fasciculatus_S2_contig9517:3651..37771696842600.0632932-CDS-E_fasciculatus_S2_contig9517:3651..3777Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9517 3652..3777 -
1696842600.0732017-CDS-E_fasciculatus_S2_contig9517:5754..59041696842600.0732017-CDS-E_fasciculatus_S2_contig9517:5754..5904Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9517 5755..5904 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842600.0823972-UTR-E_fasciculatus_S2_contig9517:5904..59341696842600.0823972-UTR-E_fasciculatus_S2_contig9517:5904..5934Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9517 5905..5934 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9517.17546.1

>prot_E_fasciculatus_S2_contig9517.17546.1 ID=prot_E_fasciculatus_S2_contig9517.17546.1|Name=mRNA_E_fasciculatus_S2_contig9517.17546.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=192bp
MVGLDPHAAELGEGNNNAAGAKAFCLRIIAATSTVAVGYKPNAAFFEAFG
AEGVAALKEVIAAVPEGIPVLLDAKRGDIGTTAAAYASGAFEVLGAHAIT
LNAYMGVDTVEPFLKDPAKGVFVLCKTSNKSSNELQTLPVGSSGKALFEE
VASLCQSWNKDNNVGLVVGATDAEALARVRAAAPDLWILAPG
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mRNA from alignment at E_fasciculatus_S2_contig9517:256..5934-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9517.17546.1 ID=mRNA_E_fasciculatus_S2_contig9517.17546.1|Name=mRNA_E_fasciculatus_S2_contig9517.17546.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5679bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9517:256..5934- (Ectocarpus fasciculatus EfasUO2)
AGCCGCGTGGAGGAGGTGGACTCCCTGCTTATGGTCGGTCTGGATCCCCA
TGCCGCGGAGCTAGGCGAGGGCAACAACAACGCCGCGGGGGCCAAGGCTT
TCTGCCTCAGGATCATCGCGGCCACCTCGACGGTTGCCGTGGGCTACAAG
CCCAACGCTGCCTTTTTCGAGGCCTTTGGGGTGAGTGGGCGATAGGAATC
TAGCGAGGGCTGTTCGACATCAAGCTCTTGTTTTCTTTGGGTGTGCGAAA
GGGCATGCGTCGAGTAGTAATGCCCGGGTGCCGTGTGCGCTGTACTTGAT
GTTTTTCGTGCCCCCCCGCGCTTCGACGTGGGTACTGTAGACTAATGGGT
ACCTCGCCGGCGGGCGGGTGAGAGCATGCGTGCACATCCGACTCGCCTCT
CCTTGTCTCTCTCGCTTTTGCTCTCTCTCTCGCTGGTGTGTAGATCTGTG
GAAGACGAAGCTTGCTGGCATACTGCTGTAAATGATGCCAACTTTTGCGC
GTTTGCAGACCACCAGACCTTATACGGGTATGCGAACTGGCATGACGAGC
GCGACGACATGTTACAGCAGCACACATGCACCATCCACCACGTGCCCCTG
GTATCTACAGCAGTACAGCTACATACATACAGTACACGCCGTGGGCGAAC
CGGTACCGTACGTCTCTAATCCACGACGGTGTAGATAAGTAGTGACACTA
CCATGAAGGACATGGTTCGCATAGTCCAGACTATGCATACATGCGAGAGC
ACAAAGTGCCGTCAAAACCAGGCGTTGTTCAGAAGCGAGTCGGCCTCGTA
CTAATGTATCTGTGACGAGAATTCCCCACTTATTGCGTATGTAAAGACCT
AACACAAGACACAAGACATCCCTCCCACCGGGGTACAGCGGTACAGCAGC
ATCATCTCGAACGGGCTGCTGTGATGTTGCAGTGACCGCTGTGTACGTCT
CGCGCAGATGGCGTGGGTTCTCTTGAGCCGGTCCCAGCAGTCCTCCCGCT
ACAGCGGCGTATCCGCCCCCGATGTTTGGCGCGTGGTCCGTGGATAAACC
GAGCCTGTAAAGGCGTGCCGCCCGCCCCCCGTGATGGCAGTTTTTTGTAG
ACTGCGGGATGGGATGCGTCAAGACAGCAGTGAACGTATGCCCGCAGCCA
CTATTCGTCTCCGTATATGGTGGCAATTTAATGAGGTACATATTACAGCT
CCGGAGCCAACCTATCGTGGAACCCAGAACCCAGAAGCGGGTGCACTTGC
CGGCGGCTACTGTAGCTGTAAAGCTATACACAGCTGTTTCAAAAAGAGAA
TAAATGCACCAATGGTATGCATAGTCTATGCTCTTCAGCACCAAGTATGT
GCCTCACAGCGGTGCACATGACTACTGAAGGGTCTGTGACCTGTGACGGA
ACTAGCTGTGATGTAACGTAACTACAGCCAAAGTCTGTGACGGTCCGTTG
TGCGCCGCCGCCCGGTCGTTGCTTGGTACTGATGTCTTCGTCAGACATGA
CCGGTGTGGACGGTATGTTTGTGGCATGTTTGACGCCCACGTGGGCGTTG
GGAAATGCGTATGGTCATGCATTGTTTTTCTGATGTTTGAAGGTGCTATG
GCGTTGAAGGCGGCTGCGTATAATCTTGTTGGCTTCAGGACGCATGTTGT
GTCCTGCCTCCGTGCCTTGTGCGAGATGCTCCCTGCTCTCACCACGGCCC
GTACCGGTGCTGCTGCTACTACTGCAGGTTGCTGTGACTTCACGGTTGTG
CCGCCGCTCAACCCTTAAAATGTTCGATGCATCCGTAAGGCTGTATGCAG
ATTTGTGAGCGTTCTATTTTGGTTCGTTGAGATTGACTAGGCTGTTGGAG
TCAAAACGCATCAGCAGTGTGAACTGTTGAGTTTGGGATGCGTCACACCG
CAGCTGGCAGCCAGGTGTGGATTAGTCCTGCTTCCTGCTCCATATTTTCA
TCTTGCATTTTTCATCTTTCATCTTTCATCTTGCATCATATTTTTCATCT
TTCATCACAACTGCGGTGAGCGCTGATGTGAAGTGAAGGTGAAACAAAAA
AAAAACGCCCTTTCTGCTCTCATGAACCCACTCCGGAAGGAGGAAGGATC
ACTTGTGGCTCTTACAATACAGCATGCATGTTACGTCGTTTGGTTAAATC
GCTTCAGGCGGAAGGCGTGGCCGCTTTGAAGGAGGTCATCGCTGCCGTGC
CGGAGGGCATCCCGGTCCTGCTCGACGCCAAGCGGGGCGACATCGGGACG
ACGGCCGCCGCGTACGCCTCTGGCGCCTTCGAGGTACAGGGGGTTGGGTC
GCGCACAAGGGGATTCCGGATGTTGGCAGCCCTCCTGAAAGTTTGTTGGC
CTCAACTCAAGTCTACATGTATTTTATTTTGGCTAGGCGGCGGAGCAATA
GGTCGAGTGAGCACCGTAGGTGACATAAGGTATCACATCCACAGAAGATA
CCACATGCGTAGCGACCCCGTCTCCTGCAAGCTTAATAGAAAATACATGT
ACCAAAGACTACCCGTTCGAGATATCACCACAGCAGTCAGTCGATGTACC
ATGTGTTGGAACAACTCTTTTCAGTTAGTGGGAGGAAAAACGGCTGGAAG
GAAAGTTTAAGTTTTGGCGGAGAAGGAGGGCTCGTTGTTTGATGTTTCAT
GGTGCAACGAAGCAAGACAAGGCCTCTCGCACTGTGGCTCTTGAGGGCTG
TCTCGACTCGAAGCCCAAAAATAATCAGGTCAAACGGATCATGAGGAACA
TCTTTGTCGTCCTTTGTGTTGCTTGTTCTCCGTCTTTTTGAATCGCTGCT
GTTACTGCCGGGAGAAGATATCTTTCACACCTCTCTACCCCCCTCCCCCC
CCCCTCCGACTACGTACCGAAGGGACGATTGGCCATTGGGAATCGTTCCT
GGTCCTGTGGAAGCATTGGGAACATTGCTCAGTCCTGCTCCCGAGGACGC
GTGGTCAATGGTCTAACCGCAAATGCATGCAAAACATAAGAGTACCCCCA
ACACCCTTCCCCCTTCCCCCCCTCCGACTGCTGTTGGTGCAGGTGCTCGG
CGCCCACGCCATCACACTGAACGCGTACATGGGCGTGGACACTGTCGAGC
CTTTCCTCAAGGATCCCGCGAAGGGAGTGTTCGTGCTGTGCAAGGTGGGA
TGACGTACGTGATTACTTCATGAGTGACCTCATAGCATATCTTTTTTTTT
TCTTGCGAAGAACACTACAAACCATCCCTTGCACAGACAACAGCAGTCCC
GTTCTTCCTCGGTTAAGTCGGTTAGACCTTTGATGCAAGGAAGGCTATGT
ACGTCGCCATGCATGGTGGGATTTGTCAAATTCATGTGAGGGTTTCAGAG
CCATACACCTGCCTGTAGCGGGCCACACTCATTTGCAAGGGAGGGGACGG
GGCAGGACTGTGGACTATTTGTCTATTATAGCTCGATGATTGCGCCGCGT
GGACGGTGTGGATGCATTCGTTCGCCGAGTTGAAGCCGGTTAGACCTTTA
CCCAACCTCAACCTCGAGGATTAGAGGGCAATCGATCTCGCGGCCCTTTC
CATCGGTGTTTGGCAAATGCAGACGCTAAGGCAAAGGCTAAGGCAAAGGC
TGTGGCTGTTGGCTTCTTTCTTTCTCTGTTTCATGTCCGTATCTAAATAC
CGTAGTTCTGGAGGGGTTGTGCCTGAGCCGACCAAAGATTTCCAAAATTA
TGTTTCGTGATTCGCAAGAGATCAAACGTATCGCTTGGTTGGAGAGACTG
GCTCAACACGCAAGAAATACGGAAAACTATTGAAAGAACCGAAGACTGAA
ATGACAGTAGTGCTGCGTGACAACGCAGCTGCACAAGTGCTTGGTATGTA
CCATCATGTACTGGCACGTTGTCTCCTGGTTGATCGTGTCCCTGTCCCTG
CTGGCTTGTTGGGCAGACGTCGAACAAGAGTTCGAACGAGCTGCAGACGC
TGCCGGTGGGAAGCAGCGGGAAGGCCCTGTTCGAAGAAGTAGCTTCGCTG
TGCCAAAGGTGACTTGTCTACATTTCTATTGTTGGGCGGTGGTGTTGGTG
TTGTTGTTCCACAAACCTGCTACAATTAGTGGTGATCGTGGTGTTGTTGT
TGCGGGTGTTGGAGGCGGCATAGCTAGCTACAGTAGCTCCGTTGAGCGTG
TAGTTGATTTTGTGACGTCCCTGTATACCGGCGTTGTCTACTGTAGCTCG
GTTTGGCGTGTCGTATCGTAGCATGGAGCAAGGGGTGCCTCTCCCTTGTG
GCACTTGGTACGCTGTGCCCTTTTCTCACTTCTCACTACACCAATTTTCT
TGATGGTGAGGAGCGATCACCTATTAATAGTGCACACAGGTACAAAAGGT
CAGTTCGATAGCATCACATCATCACATCACACGTTGTTCTTCGGACTTGT
GTGCTCCTGTGGGACATCATTGTACCCTGTTATACTTCGAGCCTTCCACG
ACGTACGGCACAAAACTGCAAACCTTCCTTTCTGCTGGCTATTTTTATTT
TCTGGTTCTTCAACCGGCCTTGGCTTTTCCTCACCCCCCTAAACGTCACC
CACATGTTCAAATGTAGGTGTTTTTTGTTTTGTTATTTTCGTTCTTTTTT
TTTTTTTGCACTCCCGTCGGTTCCAAGCGCACGATACTGTATGCGGTTTT
GCTTTCGTGGTTTTCGTTTCCCGCTATTGTTTGACTCGTTATTTTTCCCC
TCAATACCACACGCCCCCTTCTTCCTTGTAGTTGTTTTCTTCGATGCATG
GAGCCAGCCCCCTTGTTCCAAACGAGGCACGCCTGTCTTCATGGATACAG
TCGATAAGGCGGGTGGGTATGCGCCAGACCGATTCACCCGCCCTATGCAG
GGCACCTGCCTTATTCAATGTGAAGACAAGTTGATTATTCCGTCTGTGCC
AGCCAATCCTACCCGCCTTACACATTATACGGGGCACCCGCCTTATATAT
AACCCGCCTTACACATTATACAGGGCACCCGCCTTAAATATAACCCGCCT
TACACATTATACAGGGCACCCGCCTTAAATATAACCCGCCTTACAGAGGG
AGGGCATACGACTGTACCTCTTTATTTGTTCAATTGTTTTCTGCTTTGCC
TTCTCTTCTATTCCTCTCGTTCTTCACATCGACCGTACCATTGATGTATG
CTGGTATGTTTTTTCTCTCCCAATTTTTCTGTCGGACTTTAGTTGGAACA
AGGACAACAACGTGGGTCTCCTCTCATATCGTTCTTCACATCTACATCTA
CAAGCCAGTACCATTGACATGTATTTCCTTTCTATTCGATATTTGTTGTC
GGTCTTTATTTAGTTGCCGTTGATATGAATTTCCTTTCTGTTCGATGTTT
GTTGTCGGTGTTTATTCAGTTGCCATTGATGTGTATTTCCTTTATTTTCA
AGCCAGTACCATTGACGTGTATTTCCTTTCTATTCGATGTTTGTTGTCGG
TGTTTACTTAGTTGCCGTTGATATTAATTTTTCTCTCTGTTCGATTTTTG
TTGTCGGTGTTATTTAGTTGCCATTGATATGAATTTCCTCTCTGTTCGAT
ATTTTTTGTCGGTGTTTATTTAGTTGGAACAAGGACAACAACGTGGGTCT
CGTGGTTGGGGCTACCGATGCAGAAGCTCTCGCCCGCGTACGAGCTGCCG
CCCCAGATCTGTGGATTCTCGCTCCAGGT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9517:256..5934-

>mRNA_E_fasciculatus_S2_contig9517.17546.1 ID=mRNA_E_fasciculatus_S2_contig9517.17546.1|Name=mRNA_E_fasciculatus_S2_contig9517.17546.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=576bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9517:256..5934- (Ectocarpus fasciculatus EfasUO2)
ATGGTCGGTCTGGATCCCCATGCCGCGGAGCTAGGCGAGGGCAACAACAA
CGCCGCGGGGGCCAAGGCTTTCTGCCTCAGGATCATCGCGGCCACCTCGA
CGGTTGCCGTGGGCTACAAGCCCAACGCTGCCTTTTTCGAGGCCTTTGGG
GCGGAAGGCGTGGCCGCTTTGAAGGAGGTCATCGCTGCCGTGCCGGAGGG
CATCCCGGTCCTGCTCGACGCCAAGCGGGGCGACATCGGGACGACGGCCG
CCGCGTACGCCTCTGGCGCCTTCGAGGTGCTCGGCGCCCACGCCATCACA
CTGAACGCGTACATGGGCGTGGACACTGTCGAGCCTTTCCTCAAGGATCC
CGCGAAGGGAGTGTTCGTGCTGTGCAAGACGTCGAACAAGAGTTCGAACG
AGCTGCAGACGCTGCCGGTGGGAAGCAGCGGGAAGGCCCTGTTCGAAGAA
GTAGCTTCGCTGTGCCAAAGTTGGAACAAGGACAACAACGTGGGTCTCGT
GGTTGGGGCTACCGATGCAGAAGCTCTCGCCCGCGTACGAGCTGCCGCCC
CAGATCTGTGGATTCTCGCTCCAGGT
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