mRNA_E_fasciculatus_S2_contig9483.17516.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J951_9PHAE) HSP 1 Score: 261 bits (667), Expect = 2.140e-82 Identity = 144/185 (77.84%), Postives = 153/185 (82.70%), Query Frame = 1
Query: 16 NGSGKTAVEVEDDSRINEEARALIELEKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXXPLSFRPHPEGMAPWGEDPTTAAE 570
NGSGKTA+EVE D +IN+EA+ALIELEKPRLW++LEELRDRARDVEEKVA+L RAREE DEDP PR EGASFLALKQTLLLSYCREICSYAAAK RGEA+GG GAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAAS PLSFRP PEGMAPWGEDP+TAAE
Sbjct: 95 NGSGKTAMEVEGDGKINKEAKALIELEKPRLWQTLEELRDRARDVEEKVASLSERAREEMDEDPWPRHEGASFLALKQTLLLSYCREICSYAAAKARGEALGGGGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASAGGSADGEVGGSGGDDD-----PLSFRPRPEGMAPWGEDPSTAAE 274
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ1_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.380e-15 Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 1
Query: 61 INEEARALIELEKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXX----PLSFRPHPEGM 534
++E+ + + E L + +E+ ++A++V+ KV L R +E+D G +G S+L KQ +LLSYC +C Y K RGE + A +L+ELR +E+LRP+D +LKYQ DKL R AA+ XXXX PLSFRP+P+ +
Sbjct: 12 LDEQQQERVAREAGELRQVMEDFDEKAQEVQSKVDDLLLRLEQEKDARVG---DGVSYLVAKQQMLLSYCLNLCVYLGRKLRGEGVADHAATWQLLELRGALERLRPLDARLKYQLDKLFRAAAAPASGGARAAPHPDAAEHAXXXXXXADPLSFRPNPDAL 170
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC79_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.160e-15 Identity = 77/161 (47.83%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 61 INEEARALIELEKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXX---PLSFRPHPEGM 534
++E+ + + E L + +E+ ++A++V+ KV L R +E+D G +G S+L KQ +LLSYC +C Y K RGE + A +L+ELR +E+LRP+D +LKYQ DKL R AA+ XXXXXXXXXXXXXXXXXXXXX PLSFRP+P+ +
Sbjct: 12 LDEQQQERVAREAGELRQVMEDFDEKAQEVQSKVDDLLLRLEQEKDARVG---DGVSYLVAKQQMLLSYCLNLCVYLGRKLRGEGVADHAATWQLLELRGALERLRPLDARLKYQLDKLFRAAAAPXXXXXXXXXXXXXXXXXXXXXXADPLSFRPNPDAL 169
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU38_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 3.010e-15 Identity = 77/161 (47.83%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 61 INEEARALIELEKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXX---PLSFRPHPEGM 534
++E+ + + E L + +E+ ++A++V+ KV L R +E+D G +G S+L KQ +LLSYC +C Y K RGE + A +L+ELR +E+LRP+D +LKYQ DKL R AA+ XXXXXXXXXXXXXXXXXXXXX PLSFRP+P+ +
Sbjct: 12 LDEQQQERVAREAGELRQVMEDFDEKAQEVQSKVDDLLLRLEQEKDARVG---DGVSYLVAKQQMLLSYCLNLCVYLGRKLRGEGVADHAATWQLLELRGALERLRPLDARLKYQLDKLFRAAAAPXXXXXXXXXXXXXXXXXXXXXXADPLSFRPNPDAL 169
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: neuroguidin (isoform X1 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RCY5_ELAGV) HSP 1 Score: 77.0 bits (188), Expect = 2.200e-13 Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = 1
Query: 94 EKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXXPLSFRPHPE 528
E P+L + L+E++D V KV L + R++Q P +G S+L K LLLSYC+ I Y K +G ++ G LVE+R +EK+RP+D+KL+YQ KL R A S PL +RP+P+
Sbjct: 18 EAPQLVKVLKEMKDGLDAVRSKVETLTQKVRQKQ----FPTADGMSYLEAKHLLLLSYCQSIVYYLLRKAKGLSIEGHPVVRSLVEIRLFLEKIRPIDKKLEYQVQKLTRAAGSVASEKTVSVNVNEKDEKQEEEDPLKYRPNPD 158
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: neuroguidin-A-like (n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CD790) HSP 1 Score: 76.3 bits (186), Expect = 4.560e-13 Identity = 54/161 (33.54%), Postives = 81/161 (50.31%), Query Frame = 1
Query: 52 DSRINEEARALIELEKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXXPLSFRPHPEGM 534
D +E+ I + P L L +L D+ D ++ +L + D + ++G SFL +K LLLSY + Y K G+++ G+ RLVELRTVMEK+RP+D+KLKYQ DKL+++A + PL F+P PE +
Sbjct: 16 DFDASEKEDEFIAKDVPELVALLSDLNDKLSDANKRTTSLIEKV----DTNTLSTEKGVSFLEMKFHLLLSYLINLVHYMLLKAHGKSIEGSPTVDRLVELRTVMEKIRPIDQKLKYQIDKLIKIATTGLAGQEND--------------PLRFKPRPENL 158
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: neuroguidin-like (n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I5G4_ACTTE) HSP 1 Score: 75.9 bits (185), Expect = 5.190e-13 Identity = 53/152 (34.87%), Postives = 81/152 (53.29%), Query Frame = 1
Query: 82 LIELEKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXXPLSFRPHPEGMA 537
LI + P +L+E+ ++ ++ ++V L ++ D++ +G SFL +K LLLSY I Y K GE + G A RLVE+RTV+EKLRP+D+K+KYQ DKL+++ + PL F+P+PE MA
Sbjct: 6 LIAKDLPEYIATLKEIDEQVSEISQRVGGLIAKI----DDEDISTAKGISFLEVKTQLLLSYLINIVYYMLLKSDGEKIEGDSAIDRLVEIRTVLEKLRPIDQKMKYQIDKLIKMITTGMTAGDSD--------------PLRFKPNPENMA 139
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: Uncharacterized (protein n=2 Tax=Morus notabilis TaxID=981085 RepID=W9RAA8_9ROSA) HSP 1 Score: 75.5 bits (184), Expect = 8.010e-13 Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 1
Query: 85 IELEKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAAS 435
IE E P+L L+E++D V KV AL ++ R +Q P EG S+L +K LLL+YC+ + Y K +G ++ G LVE+R +EK+RP+D+KL+YQ KL RV A+
Sbjct: 12 IEKEAPQLVSLLKEMKDGLDTVRSKVQALTAKVRADQ----FPTAEGMSYLEVKHLLLLNYCQSLVYYLLRKAKGFSIEGHPVVRSLVEIRLFLEKIRPIDKKLQYQIQKLTRVTAT 124
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: Uncharacterized (protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5HQG4_ZINOF) HSP 1 Score: 75.5 bits (184), Expect = 8.070e-13 Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = 1
Query: 94 EKPRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXXPLSFRPHPE 528
E P+L L+E++D V KV L + RE Q P EG S+L K LLL+YC+ I Y+ K +G ++ LVE+R +EK+RP+D+KL+YQ KL+R A++ PL FRP+P+
Sbjct: 22 ETPQLMAILKEMKDGLDVVRRKVEVLTQKVRENQ----FPTAEGMSYLDAKYLLLLNYCQSIVYYSLRKAKGLSVQDHPVVKSLVEIRLYLEKIRPIDKKLEYQIQKLIRAASNFATENSVISADKEKEASQKEEDPLKFRPNPD 162
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Match: Neuroguidin (n=2 Tax=Carex littledalei TaxID=544730 RepID=A0A833RMP9_9POAL) HSP 1 Score: 74.7 bits (182), Expect = 1.500e-12 Identity = 51/143 (35.66%), Postives = 70/143 (48.95%), Query Frame = 1
Query: 100 PRLWRSLEELRDRARDVEEKVAALKSRAREEQDEDPGPRDEGASFLALKQTLLLSYCREICSYAAAKGRGEAMGGAGAAGRLVELRTVMEKLRPMDRKLKYQTDKLLRVAASXXXXXXXXXXXXXXXXXXXXXXPLSFRPHPE 528
PRL L+E++D V+ KV AL + ++ D P EG S+L K LLL YC+ I Y K +G ++ G LVE+R +EK+RP+D+KL YQ KL + A PL FRP+PE
Sbjct: 17 PRLLDLLKEMKDGLDVVKSKVEALTVKVKQ----DKLPTSEGISYLEAKHLLLLDYCQSIVYYLLRKAKGLSIEGHPVVRNLVEIRLFLEKIRPIDKKLDYQIQKLTKAAEGGPAPEKIVTSNKELGKSQKEEDPLKFRPNPE 155 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9483.17516.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9483.17516.1 >prot_E_fasciculatus_S2_contig9483.17516.1 ID=prot_E_fasciculatus_S2_contig9483.17516.1|Name=mRNA_E_fasciculatus_S2_contig9483.17516.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=190bp KSSNGNGSGKTAVEVEDDSRINEEARALIELEKPRLWRSLEELRDRARDVback to top mRNA from alignment at E_fasciculatus_S2_contig9483:2278..5559+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9483.17516.1 ID=mRNA_E_fasciculatus_S2_contig9483.17516.1|Name=mRNA_E_fasciculatus_S2_contig9483.17516.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3282bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9483:2278..5559+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9483:2278..5559+ >mRNA_E_fasciculatus_S2_contig9483.17516.1 ID=mRNA_E_fasciculatus_S2_contig9483.17516.1|Name=mRNA_E_fasciculatus_S2_contig9483.17516.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=570bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9483:2278..5559+ (Ectocarpus fasciculatus EfasUO2)back to top |