mRNA_E_fasciculatus_S2_contig9390.17440.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9390.17440.1
Unique NamemRNA_E_fasciculatus_S2_contig9390.17440.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQW4_ECTSI)

HSP 1 Score: 457 bits (1176), Expect = 2.950e-160
Identity = 218/228 (95.61%), Postives = 221/228 (96.93%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNEVCM 684
            VCTTP C KPGTMACPTCIKLGLPASRYC Q CFKGDWGRHKAIHKLAKA+ATASS ATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRG+REACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVN+DVTAYFGGFHGDLNE  M
Sbjct:    8 VCTTPECGKPGTMACPTCIKLGLPASRYCAQACFKGDWGRHKAIHKLAKAKATASSGATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGIREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNVDVTAYFGGFHGDLNETFM 235          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL51_9STRA)

HSP 1 Score: 325 bits (834), Expect = 1.810e-108
Identity = 154/225 (68.44%), Postives = 175/225 (77.78%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            +C TPGC KP +M CPTCIKLGLP S YC QECFK  W +HKA+HKL ++    S +   PA    F+GY+++G LRPA LSA RVVP HI RPDYADHP G S  E+G K    + +IP+YTA Q+ G+REACRIGREVLDA GRA RVGATTDEIDRV HEA VER AYPSPLNYY FPKSVCTSVNE+ICHGIPD REL DGD+ N+DV+ YFGGFHGDLNE
Sbjct:    4 LCETPGCGKPASMGCPTCIKLGLPRSLYCSQECFKSHWPQHKALHKLVRSAQEPSGIL--PA----FSGYSYTGSLRPAPLSAPRVVPSHIPRPDYADHPLGHSASEQGDKMT--NTSIPIYTAKQVEGIREACRIGREVLDAGGRAARVGATTDEIDRVVHEACVERGAYPSPLNYYQFPKSVCTSVNEAICHGIPDARELSDGDVCNVDVSTYFGGFHGDLNE 220          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5ACP1_BRABE)

HSP 1 Score: 284 bits (726), Expect = 5.260e-92
Identity = 134/225 (59.56%), Postives = 157/225 (69.78%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            VC T GC  P  + CP C++LG+P S +C Q+CFKG WG HK +HK+A  +   S+ A +P     + GY F+G +RP  LSA R VP HI RPDYADH EG    E   K   GS  I V +  +I GMR ACR+GREVLDAA  A+ VG TTDEIDRV HEA+V+R  YPSPLNYY FPKS CTSVNE ICHGIPD+R L+DGDIVN+DVT Y  GFHGDLNE
Sbjct:   10 VCETDGCSNPARLQCPKCLQLGIPGSFFCSQDCFKGSWGSHKKLHKVAAIKTAESAAAQSPQKYNPWPGYRFTGKVRPYPLSAKREVPDHIPRPDYADHTEGVPSSELALK---GSTQIRVLSDEEIEGMRVACRLGREVLDAAAAAIAVGMTTDEIDRVVHEASVDRECYPSPLNYYTFPKSCCTSVNEVICHGIPDLRPLQDGDIVNVDVTVYHRGFHGDLNE 231          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YX73_9STRA)

HSP 1 Score: 276 bits (706), Expect = 4.220e-89
Identity = 137/227 (60.35%), Postives = 162/227 (71.37%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPA--SRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            VC TPGC KPG MACPTC K+G+PA  S +C Q+CFK  W +HK +HKL           T P+   +F GY FSG LRP  +S  R VP HI +PDYA    G  + E+ + R   SN IPVY+  QI G+REACR+GREVLD AGRA+R+G TTDEID + HEA +ERN YPSPLNYY+FPKSVCTSVNE ICHGIPD R L+DGDI+NIDVT Y  G+HGDLN+
Sbjct:    6 VCATPGCGKPGKMACPTCKKIGVPANISSFCSQDCFKKYWPQHKGMHKLF----------TQPSTDDKFFGYQFSGPLRPGTVSPMRTVPDHIMKPDYAVG--GIPISEQQADR---SNKIPVYSPEQIAGIREACRVGREVLDIAGRAIRIGMTTDEIDVIVHEACMERNIYPSPLNYYHFPKSVCTSVNEVICHGIPDSRPLQDGDILNIDVTIYKNGYHGDLND 217          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLP6_9STRA)

HSP 1 Score: 276 bits (706), Expect = 4.490e-89
Identity = 135/227 (59.47%), Postives = 163/227 (71.81%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPA--SRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            VC TPGC KPG MACPTC KLG+PA  S +C Q+CFK  W +HK  HK+     T S VA       +F GY FSGDLRP  +S  + +P HI++PDYA    G  + E+ + R   SN IPVYTA +I G+REACR+GREVLD AG ++R+G TT+EID + H A +ERN YPSPLNYY+FPKSVCTSVNE ICHGIPD R L+DGDI+NIDVT Y  G+HGDLN+
Sbjct:    6 VCATPGCGKPGKMACPTCKKLGVPANISSFCTQDCFKAYWPQHKGFHKVF----TQSQVAAED----KFFGYRFSGDLRPGTVSPQKTMPDHIKKPDYAV--SGIPVSEQAADR---SNKIPVYTAEEIAGIREACRVGREVLDLAGNSIRIGMTTNEIDEIVHAACIERNVYPSPLNYYHFPKSVCTSVNEVICHGIPDSRPLQDGDILNIDVTVYKDGYHGDLND 219          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: methionine (aminopeptidase 1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76E7BD)

HSP 1 Score: 273 bits (699), Expect = 5.790e-88
Identity = 128/224 (57.14%), Postives = 157/224 (70.09%), Query Frame = 1
Query:    4 CTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            C +PGC +P  + CPTCIKL +  S +C Q CFKG+W  HK +HKLAK+   + S      +   + GY+F+G LRPAA S+TRVVPPHI RPDYADHPEG  + E   K   G+  I       I  MR AC++GREVLD A +A+  G TTDE+DR+ HEA+V+R+ YPSPLNYY FPKS CTSVNE ICHGIPDMR L++GDI N+DVT Y  G+HGDLNE
Sbjct:    6 CESPGCSEPAKLQCPTCIKLNIQGSFFCNQTCFKGNWDLHKNLHKLAKSDVASQSSKKGAGLFNPWPGYSFTGKLRPAAQSSTRVVPPHIPRPDYADHPEGYPLSEMKLK---GNTYIRQLDDDDIAAMRVACKLGREVLDEAAKAIGPGVTTDELDRICHEASVDRDCYPSPLNYYQFPKSCCTSVNEVICHGIPDMRPLQNGDICNVDVTVYHRGYHGDLNE 226          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=15 Tax=Anopheles TaxID=7164 RepID=Q7QAH2_ANOGA)

HSP 1 Score: 273 bits (697), Expect = 9.680e-88
Identity = 131/225 (58.22%), Postives = 153/225 (68.00%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            +C T  C+KP T+ CP C+K+G+  S +C Q+CFKG W  HK IH LAK + T    A  P     +  YTF+G LRP   +  R VPPHI RPDYADH EGRS  EE  +   G+N I V    +I GMR ACR+GREVLD A R   VG TTDEIDR  HEA +ER  YPSP+NYYNFPKS CTSVNE ICHGIPD+R L+DGD+ N+DVT Y  GFHGDLNE
Sbjct:    8 LCVTDDCKKPSTLQCPVCLKMGIQGSYFCSQDCFKGSWKEHKVIHLLAKGKETN---AYNP-----WPYYTFTGKLRPFEQTPRRPVPPHIPRPDYADHKEGRSKSEEALR---GNNTIKVLDDEEIEGMRVACRLGREVLDEAARVCDVGVTTDEIDRAVHEACIERECYPSPMNYYNFPKSCCTSVNEVICHGIPDLRPLEDGDLCNVDVTVYHRGFHGDLNE 221          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JL66_LINUN)

HSP 1 Score: 268 bits (686), Expect = 5.180e-87
Identity = 129/225 (57.33%), Postives = 154/225 (68.44%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            +C TP C K   + CPTCIKLG+  S +C QECFKG W  HK IHK AKA +  + V+ +      + GY+F+G LRP   SA R V  HI RPDYADHP+G S  E   +   GS  I V    +I GMR A ++ REVLDAA  A+ VG TTDEIDR+ HEA+V+R  YPSPLNYYNFPKS CTS+NE ICHGIPDMR L++GDI N+DVT Y  G+HGDLNE
Sbjct:    9 LCETPACNKEAKLQCPTCIKLGVEGSFFCSQECFKGSWNEHKKIHKKAKADSQPNDVSNS---YHPWPGYSFTGKLRPYPQSAMRTVGDHIARPDYADHPDGVSHSERSMR---GSTNIKVLNDEEIEGMRVAGKLAREVLDAAAAAIAVGVTTDEIDRIVHEASVDRECYPSPLNYYNFPKSCCTSINEVICHGIPDMRPLENGDICNVDVTVYHRGYHGDLNE 227          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A194QSB9_PAPMA)

HSP 1 Score: 267 bits (682), Expect = 1.960e-86
Identity = 131/226 (57.96%), Postives = 150/226 (66.37%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARAT-ASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            +C TPGC+    + CPTCIKLG+  S +C Q+CFK  W  HK IH LAK  +T  S+V   P     +  + F+G LRP      R VPPHI RPDYADHP G    E  +K   GS  I V    +I GMR ACR+GREVLD A RA  VG TTDEIDRV HEA +ER  YPSPLNY+NFP S CTSVNE ICHGIPD+R L+DGDI N+DVT Y  GFHGDLNE
Sbjct:    8 MCETPGCKSIAQLQCPTCIKLGIQGSFFCNQDCFKKSWKSHKIIHSLAKGESTDGSNVEYNP-----WPSFNFTGKLRPFPAGPKRTVPPHIGRPDYADHPTGFPASENAAK---GSGQIKVLDDEEIEGMRVACRLGREVLDEAARACDVGVTTDEIDRVVHEACIERECYPSPLNYHNFPNSCCTSVNEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNE 225          
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L359_9STRA)

HSP 1 Score: 269 bits (688), Expect = 2.430e-86
Identity = 131/227 (57.71%), Postives = 161/227 (70.93%), Query Frame = 1
Query:    1 VCTTPGCEKPGTMACPTCIKLGLPA--SRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
            +C T GC  PG M CPTC K+G+PA  S +C Q+CFK  W  HK +HK+  A A+AS+         +F GY F+G+LRP  +S  + VP HI+RPDY     G  + E+ + + G    IPVYT ++I GMREACR+GREVLD AGRA+RVG TTDEID + HEA ++R  YPSPLNYY+FPKSVCTSVNE ICHGIPD R L+DGDI+NIDVT Y  GFHGDLN+
Sbjct:    7 ICATEGCNLPGKMVCPTCKKIGVPAAISSFCTQDCFKKYWPHHKGLHKMFTAEASASTD--------KFFGYQFTGNLRPGKVSPMKTVPEHIKRPDYWS--SGIPVSEQQADKSG---KIPVYTPAEIAGMREACRLGREVLDIAGRAIRVGMTTDEIDAIVHEACMQRECYPSPLNYYHFPKSVCTSVNEVICHGIPDDRPLQDGDILNIDVTVYKNGFHGDLND 220          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Methionine2.950e-16095.61aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
Methionine1.810e-10868.44aminopeptidase n=1 Tax=Tribonema minus TaxID=30337... [more]
Methionine5.260e-9259.56aminopeptidase n=4 Tax=Branchiostoma TaxID=7737 Re... [more]
Methionine4.220e-8960.35aminopeptidase n=1 Tax=Thraustotheca clavata TaxID... [more]
Methionine4.490e-8959.47aminopeptidase n=1 Tax=Achlya hypogyna TaxID=12027... [more]
methionine5.790e-8857.14aminopeptidase 1-like n=1 Tax=Eurytemora affinis T... [more]
Methionine9.680e-8858.22aminopeptidase n=15 Tax=Anopheles TaxID=7164 RepID... [more]
Methionine5.180e-8757.33aminopeptidase n=1 Tax=Lingula unguis TaxID=7574 R... [more]
Methionine1.960e-8657.96aminopeptidase n=1 Tax=Papilio machaon TaxID=76193... [more]
Methionine2.430e-8657.71aminopeptidase n=1 Tax=Aphanomyces stellatus TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9390contigE_fasciculatus_S2_contig9390:40..4684 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score460.3
Seed ortholog evalue5.2e-127
Seed eggNOG ortholog2880.D8LQW4
Preferred nameMETAP1
Model size684
KEGG koko:K01265
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008277,GO:0009889,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0010646,GO:0016787,GO:0018193,GO:0018206,GO:0019222,GO:0019538,GO:0022400,GO:0023051,GO:0031323,GO:0031326,GO:0031365,GO:0032101,GO:0032268,GO:0034248,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:2000112
Exons6
EggNOG free text desc.metalloexopeptidase activity
EggNOG OGsCOG0024@1,KOG2738@2759
Ec32 ortholog descriptionPeptidase M24, structural domain
Ec32 orthologEc-07_001830.1
EC3.4.11.18
Cds size684
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9390.17440.1prot_E_fasciculatus_S2_contig9390.17440.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9390 40..4684 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842588.4280007-CDS-E_fasciculatus_S2_contig9390:39..2431696842588.4280007-CDS-E_fasciculatus_S2_contig9390:39..243Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9390 40..243 -
1696842588.4441633-CDS-E_fasciculatus_S2_contig9390:585..6601696842588.4441633-CDS-E_fasciculatus_S2_contig9390:585..660Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9390 586..660 -
1696842588.456615-CDS-E_fasciculatus_S2_contig9390:1404..15051696842588.456615-CDS-E_fasciculatus_S2_contig9390:1404..1505Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9390 1405..1505 -
1696842588.4672036-CDS-E_fasciculatus_S2_contig9390:2334..24621696842588.4672036-CDS-E_fasciculatus_S2_contig9390:2334..2462Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9390 2335..2462 -
1696842588.479232-CDS-E_fasciculatus_S2_contig9390:3130..32131696842588.479232-CDS-E_fasciculatus_S2_contig9390:3130..3213Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9390 3131..3213 -
1696842588.4880993-CDS-E_fasciculatus_S2_contig9390:4591..46841696842588.4880993-CDS-E_fasciculatus_S2_contig9390:4591..4684Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9390 4592..4684 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9390.17440.1

>prot_E_fasciculatus_S2_contig9390.17440.1 ID=prot_E_fasciculatus_S2_contig9390.17440.1|Name=mRNA_E_fasciculatus_S2_contig9390.17440.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=228bp
VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKA
RATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHP
EGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRV
GATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMR
ELKDGDIVNIDVTAYFGGFHGDLNEVCM
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mRNA from alignment at E_fasciculatus_S2_contig9390:40..4684-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9390.17440.1 ID=mRNA_E_fasciculatus_S2_contig9390.17440.1|Name=mRNA_E_fasciculatus_S2_contig9390.17440.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4645bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9390:40..4684- (Ectocarpus fasciculatus EfasUO2)
GTCTGCACGACGCCGGGATGCGAGAAGCCAGGCACCATGGCTTGCCCCAC CTGCATCAAGCTCGGCCTGCCGGCTAGCCGGTACTGCTTCCAGGTATGAT ACTACTGGACTATGACGTATACGCACACACAGCAGCCGATGGTGAACCTC ATGTAGAGTTCGCAGCGTCGTGTGGTTTGTAGGGGGCTGTAACGCAGCAG CAGCAGCAACTTGCAGGTCTCCGACGAGCTCTGCCTCTCTCCACCAACGA GAGACGTCACACGGCGACCCTACAGCAGTACCCTTGACTCCGCTGCCGGC ACTATCGTTCCGACGAAGATTGATAGTTACAGGTTCGCCAGAACGAGGAG ACAGAAAATAATGGCGCCGCCGCAGCGCAAGGGGGCTAATAGGGCAGCGA GTTCGCGGGTATCCCCGGCTCAAGAACCCGTGGACGCTGCTGATTCTCGC CTCCTTGTTAGTAGTTGATCATGTTGCAGTACAAATGACTGCCTATAAAG TAGTCTACCCCCGTAACTCCCCGACCTTCTTTGAGTCGTTACAAGGACAG CAGTAGTGCTGCTGTAGTACATCGTGTGGTGCGTGGCGGAGAGTAGCGCC TGTTTGCTGCCAGCGTGGAGGGTTTGCCGCTCACGACGCGGCCAGCACCT TTAGATGAGTTGGTGCCCCGGGGGGCGGCGTAGGGAGCCCCCCCAAGTTT GTTGCACAACAGCAGTAGCGAGCCAGCACACGAACCAAAGACGCACTGCA TTTGTACTATGGAGGTGGGTGTCCTCTTCTCTGCCCACCTCTACATCTAC GTATCTAGCAATGGTGGGTCCGGTTAAGCGGCTCCAAGTTTAGCGACACG CGCCCTAGCCCTACACAGCGACCACAACATGGAGTGGCACCGCTGCACTC CAACTAGTCTAGTATTGCGGCAACGGCGACCTGCCAGAAGATGCCCACAT CATGTTCCCTCCTGCTGGCACTGAGGGTAAACGGCAAACCTGGCCCACGA TTGATTGCCGTCTGTGTGCTTGTGTTGTGCGTCATTTGCTGCGAACCGGC ACAGCAGGACCTAAAGCAGGACACAACCACGTGATCCACTGCTGCCTGAA GCATGTGTGAAGCCCTGGGTGTCGTTGTTTTGTACTGTAATGATGCAAGG AAGCAAGAGGGAGCTGTACAGTCAGTGTTCCCTTCTCACACATGTCGCTT TGGCCTGTCCACCTCGTACCATGCAGGCACCACGACATGTTGAAGGCCAC AGCAGTAGTGACCCAAATCCGGGACACAGCTGGTACAAATAACAAATACA CACACATACATACCTTACGCGCTTGGAATGATCCGTGGTTTCTGTGCGAG CCCTCCGCCCAGCCGACTCACTCTTTTTCCCGACCTCTGTCGATTACCTC GTACTCCTATGTTTGATCGTTATGCGCGCCGGGCGCCATGCATATGTTTC GGGGCCGCTCCTTGCCTACAGGAATGCTTCAAGGGGGACTGGGGACGCCA TAAGGCGATCCACAAGCTGGCCAAGGCAAGGGCGACAGCATCCTCCGTCG CGACGTGAGCTGTAGTGTTGCGGTTATACCGCCTTGCAAGCAGTTTACCT GTGCCTACATCAACATGTCGTTTTTCATGTGCTCGGTGCGGCACCGGTCG TCGGCGTTGTTGTCGGCACAGGCAGCGTTGTTTCTCGTTGGCAAAAATTA CCGTGAGAGAGATGGCGACTACTGTAGACCGACTTTCAAAGCTCGATTGC CCGTAGCCAAGGGGATGCGGAAAGGGTCCGAAACGAAGGCGGAAAGCCCC CAACGAAATGTTTTTCAAAAGCCGCACCATTGTTGTTGTTGGCACCAGCC TTGGCTGTGGAGTAGTCGGGTTCTGACAACCGGTGTGGGGAGGGGCGCCA TCTCTCCGCCTCCTAGGGTACTGCTGCGCTGATCGATATTGATATTGTAG AAAGCACAGCACCCGCTCGCTACAGTGACGGAGCTGCTGCCTGATGATCG TGCATGCAGCACATCGCCATGTGTAGCTATTTAGACGTTATTTTACGTGA TGATCTGTGCTTATGAGGGTCGAACCGCCTCATATCATGACAGTGAAAAA CACGTCAACCTTCCTTTTCCAAAATTCCTGCGTACGCAATACCCAATCCC CAATCTCCATTTTTGAGTAAACCCCCCCCCCCCTCCGGCGAACCCTCTCC GCTTAACCTCCTCCGGTTCCAGAACGCCCGCCGTCCGGCGAGAATTTAAC GGTTACACTTTTTCGGGGGACCTGAGACCCGCCGCCCTCTCCGCGACGAG AGTGGTTCCGCCGCATATCCGGCGGCCCGACTACGCCGATCACCCCGAAG GTGGGAAGACGAAGCTGTTGGTCCAGCAATGGATGCCACAGAAGAGAGGG GGGGGTGACCGGCAGCGATACTTGTTCTCCAGGAACGGTCGTTGTTTGTT TGTTGCCTACTCGCCATCGTTTGTGGAGTCCAGAACCAGGCGGGCAAGGA GGGTCAGCAAGGGTTGCCGCACAACATTGTCGATCAGCTACGGACTATGC ATATGTACGCGCACAAAATATAGCTGTGGATGACTGATTTTGGTCCCCAC CATTTTTTTTTATTGAACATGTATGGCGGGTGGTGCACTTAACCCCGGGT TCGCTTCCACCAAAAGCAGACACTGCTGTGAAAAGAGGGAATCCATCGTC CTCGGCAGACTTTGGGGAGATTTGTGTTCTTCATGAAGGGGTCTCCACAG GACGTCGTGACGACTGCTGTCGAGGCACTCGCGGCGGAATTAGTTGTGGT CGTGCCTCGGTCGGTGGAGACCAATCAACCGCCGCCATCCTGACTGGCTA CCAGATTTTTATCAACCATTCCCGCCACGTGCGTGCGGTTGCTTCGTAGT GGACACGAGGCCAGTGGGCACGGAGTTGTTGCGGAATGCGACACAAAGGT GTTATGCTTGAGTCCTTCTTTTTTTTTCCCCCATGGCGTTGGATGTTTTC ACGGCGAATGTGCTGGACGTCTTGTCTCCCCTGGTTCACAGCGGGAGACG ACGCAATCAACGTATCACGCGTCCCAACTTTCACGAAACAATGGATTTGT CATGCCCCACCACTTTTTGTCTGTGCGCCTCTGCTACCGGTGCTGCTGTG GTTGTTGCTTCTCTTTGGCTTGTCCCCAGGGCGGTCTATGTGTGAGGAGG GGAGCAAGAGGGGAGGAGGGAGCAACGCTATCCCCGTGTACACGGCCTCT CAAATCCGGGGCATGCGGGAGGCGTGCAGGGTACGACATTCTTTTGTGCA CGAACGGACGTTGTCTTGGACTGATGTGCTCGAAAATCTCGAGACCTTTC GTGTCAACAATCACTGCACAATTTCTACGCGCAGCAACATGGGCGGGGGG GGAGGGGGTATTTTTCTTTTGTCTGGCCGCGTTATGGGTACACCGGTCTT GCGTTCGCGAGTGCTTTCTGAAGGCCCAGCGAAGTATTGCTGTCCAACGG AATAAGTAGAGCGTCCCATCTCGAAGTGATGGCGACCGTAGATGGGAAGG GGGCGGTACAGGCACACGGCGGGAGACGCACCCGTTTCGAGAGTGGCCCG CTGCGATGTTGCGATGCATGGCTTCGCGATGCGAACATACATGCCCAACG AGGTTAAAGTGTCCCGCCCAAGTCGCGGGATACAGACGATGATATCCTGA CCACAGCCTTGACCGCAGGACCACGCGACAGCCTTCACACGCTTCTGCTG TTCCTCTTGATGCTCGTTGCTCCTGGAGGCGGTCGTGATGCTTGTTGGCG GGTGTCTCATAGGCCTGTGCTCCTTAGGTGATATTTTTCGCGATTTAGAT ACATTAACTTTTCTTCCACTCTATTTTTAGTATAATAACGGAAATCGACA ACAAAAAATCAAGGCAATCACCTAAGGAGCACAGGTCTAGTGTCTCACAC ACGTGTCGGCGACGGTTCAGTTGTGCAGCTTTTGGGTTCCCCACCCGTTA ACATGTTTGCTATTTTTCCGGCAGATCGGGCGAGAAGTTTTGGATGCGGC CGGGAGGGCTGTTCGGGTCGGGGCTACAACCGACGAGATCGATCGTGTGG TGAGCTACGCACATGTGTAGCTCCTTGTGCTTCTTCTGTGGTTCGATTGG CTACGTGTGTAATGTATACCTGTAGCTGGCTTGTCCTCGTTCCAAGGCCA TAGCTACGATTGCCCGAGCTTTTTTTCAAGGCCGTCCGATTGCGATGCCC AGAGGCGGCCTTTCCAGAACTCAAGCTGCCCTAGAACCGCTCGTGCTGCT GTCAAGCGTATTCTCCCGACCGGTTTGTGCTCGTGGTGACGAAACAGTAT CCTCATCCCGCATCCCCCCCACTGCGTTGATCCCGCGAAACGCCTCTGCG CGCACGACCCTGTTGAACTCCCTCCGCCCGCGCGGCGGCAGACCCACGAG GCGACGGTGGAGCGAAACGCATACCCGTCCCCCCTCAACTACTACAACTT CCCAAAGAGCGTGTGCACCTCGGTGAACGAGAGCATCTGCCACGGAATCC CGGACATGCGCGAGCTTAAGGACGGGGACATCGTGAACATCGACGTGACG GCGTACTTCGGGGGATTCCACGGCGACCTGAACGAGGTATGTATG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9390:40..4684-

>mRNA_E_fasciculatus_S2_contig9390.17440.1 ID=mRNA_E_fasciculatus_S2_contig9390.17440.1|Name=mRNA_E_fasciculatus_S2_contig9390.17440.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=684bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9390:40..4684- (Ectocarpus fasciculatus EfasUO2)
GTCTGCACGACGCCGGGATGCGAGAAGCCAGGCACCATGGCTTGCCCCAC
CTGCATCAAGCTCGGCCTGCCGGCTAGCCGGTACTGCTTCCAGGAATGCT
TCAAGGGGGACTGGGGACGCCATAAGGCGATCCACAAGCTGGCCAAGGCA
AGGGCGACAGCATCCTCCGTCGCGACAACGCCCGCCGTCCGGCGAGAATT
TAACGGTTACACTTTTTCGGGGGACCTGAGACCCGCCGCCCTCTCCGCGA
CGAGAGTGGTTCCGCCGCATATCCGGCGGCCCGACTACGCCGATCACCCC
GAAGGGCGGTCTATGTGTGAGGAGGGGAGCAAGAGGGGAGGAGGGAGCAA
CGCTATCCCCGTGTACACGGCCTCTCAAATCCGGGGCATGCGGGAGGCGT
GCAGGATCGGGCGAGAAGTTTTGGATGCGGCCGGGAGGGCTGTTCGGGTC
GGGGCTACAACCGACGAGATCGATCGTGTGACCCACGAGGCGACGGTGGA
GCGAAACGCATACCCGTCCCCCCTCAACTACTACAACTTCCCAAAGAGCG
TGTGCACCTCGGTGAACGAGAGCATCTGCCACGGAATCCCGGACATGCGC
GAGCTTAAGGACGGGGACATCGTGAACATCGACGTGACGGCGTACTTCGG
GGGATTCCACGGCGACCTGAACGAGGTATGTATG
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