mRNA_E_fasciculatus_S2_contig9390.17440.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQW4_ECTSI) HSP 1 Score: 457 bits (1176), Expect = 2.950e-160 Identity = 218/228 (95.61%), Postives = 221/228 (96.93%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNEVCM 684
VCTTP C KPGTMACPTCIKLGLPASRYC Q CFKGDWGRHKAIHKLAKA+ATASS ATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRG+REACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVN+DVTAYFGGFHGDLNE M
Sbjct: 8 VCTTPECGKPGTMACPTCIKLGLPASRYCAQACFKGDWGRHKAIHKLAKAKATASSGATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGIREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNVDVTAYFGGFHGDLNETFM 235
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL51_9STRA) HSP 1 Score: 325 bits (834), Expect = 1.810e-108 Identity = 154/225 (68.44%), Postives = 175/225 (77.78%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
+C TPGC KP +M CPTCIKLGLP S YC QECFK W +HKA+HKL ++ S + PA F+GY+++G LRPA LSA RVVP HI RPDYADHP G S E+G K + +IP+YTA Q+ G+REACRIGREVLDA GRA RVGATTDEIDRV HEA VER AYPSPLNYY FPKSVCTSVNE+ICHGIPD REL DGD+ N+DV+ YFGGFHGDLNE
Sbjct: 4 LCETPGCGKPASMGCPTCIKLGLPRSLYCSQECFKSHWPQHKALHKLVRSAQEPSGIL--PA----FSGYSYTGSLRPAPLSAPRVVPSHIPRPDYADHPLGHSASEQGDKMT--NTSIPIYTAKQVEGIREACRIGREVLDAGGRAARVGATTDEIDRVVHEACVERGAYPSPLNYYQFPKSVCTSVNEAICHGIPDARELSDGDVCNVDVSTYFGGFHGDLNE 220
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5ACP1_BRABE) HSP 1 Score: 284 bits (726), Expect = 5.260e-92 Identity = 134/225 (59.56%), Postives = 157/225 (69.78%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
VC T GC P + CP C++LG+P S +C Q+CFKG WG HK +HK+A + S+ A +P + GY F+G +RP LSA R VP HI RPDYADH EG E K GS I V + +I GMR ACR+GREVLDAA A+ VG TTDEIDRV HEA+V+R YPSPLNYY FPKS CTSVNE ICHGIPD+R L+DGDIVN+DVT Y GFHGDLNE
Sbjct: 10 VCETDGCSNPARLQCPKCLQLGIPGSFFCSQDCFKGSWGSHKKLHKVAAIKTAESAAAQSPQKYNPWPGYRFTGKVRPYPLSAKREVPDHIPRPDYADHTEGVPSSELALK---GSTQIRVLSDEEIEGMRVACRLGREVLDAAAAAIAVGMTTDEIDRVVHEASVDRECYPSPLNYYTFPKSCCTSVNEVICHGIPDLRPLQDGDIVNVDVTVYHRGFHGDLNE 231
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YX73_9STRA) HSP 1 Score: 276 bits (706), Expect = 4.220e-89 Identity = 137/227 (60.35%), Postives = 162/227 (71.37%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPA--SRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
VC TPGC KPG MACPTC K+G+PA S +C Q+CFK W +HK +HKL T P+ +F GY FSG LRP +S R VP HI +PDYA G + E+ + R SN IPVY+ QI G+REACR+GREVLD AGRA+R+G TTDEID + HEA +ERN YPSPLNYY+FPKSVCTSVNE ICHGIPD R L+DGDI+NIDVT Y G+HGDLN+
Sbjct: 6 VCATPGCGKPGKMACPTCKKIGVPANISSFCSQDCFKKYWPQHKGMHKLF----------TQPSTDDKFFGYQFSGPLRPGTVSPMRTVPDHIMKPDYAVG--GIPISEQQADR---SNKIPVYSPEQIAGIREACRVGREVLDIAGRAIRIGMTTDEIDVIVHEACMERNIYPSPLNYYHFPKSVCTSVNEVICHGIPDSRPLQDGDILNIDVTIYKNGYHGDLND 217
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLP6_9STRA) HSP 1 Score: 276 bits (706), Expect = 4.490e-89 Identity = 135/227 (59.47%), Postives = 163/227 (71.81%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPA--SRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
VC TPGC KPG MACPTC KLG+PA S +C Q+CFK W +HK HK+ T S VA +F GY FSGDLRP +S + +P HI++PDYA G + E+ + R SN IPVYTA +I G+REACR+GREVLD AG ++R+G TT+EID + H A +ERN YPSPLNYY+FPKSVCTSVNE ICHGIPD R L+DGDI+NIDVT Y G+HGDLN+
Sbjct: 6 VCATPGCGKPGKMACPTCKKLGVPANISSFCTQDCFKAYWPQHKGFHKVF----TQSQVAAED----KFFGYRFSGDLRPGTVSPQKTMPDHIKKPDYAV--SGIPVSEQAADR---SNKIPVYTAEEIAGIREACRVGREVLDLAGNSIRIGMTTNEIDEIVHAACIERNVYPSPLNYYHFPKSVCTSVNEVICHGIPDSRPLQDGDILNIDVTVYKDGYHGDLND 219
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: methionine (aminopeptidase 1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76E7BD) HSP 1 Score: 273 bits (699), Expect = 5.790e-88 Identity = 128/224 (57.14%), Postives = 157/224 (70.09%), Query Frame = 1
Query: 4 CTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
C +PGC +P + CPTCIKL + S +C Q CFKG+W HK +HKLAK+ + S + + GY+F+G LRPAA S+TRVVPPHI RPDYADHPEG + E K G+ I I MR AC++GREVLD A +A+ G TTDE+DR+ HEA+V+R+ YPSPLNYY FPKS CTSVNE ICHGIPDMR L++GDI N+DVT Y G+HGDLNE
Sbjct: 6 CESPGCSEPAKLQCPTCIKLNIQGSFFCNQTCFKGNWDLHKNLHKLAKSDVASQSSKKGAGLFNPWPGYSFTGKLRPAAQSSTRVVPPHIPRPDYADHPEGYPLSEMKLK---GNTYIRQLDDDDIAAMRVACKLGREVLDEAAKAIGPGVTTDELDRICHEASVDRDCYPSPLNYYQFPKSCCTSVNEVICHGIPDMRPLQNGDICNVDVTVYHRGYHGDLNE 226
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=15 Tax=Anopheles TaxID=7164 RepID=Q7QAH2_ANOGA) HSP 1 Score: 273 bits (697), Expect = 9.680e-88 Identity = 131/225 (58.22%), Postives = 153/225 (68.00%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
+C T C+KP T+ CP C+K+G+ S +C Q+CFKG W HK IH LAK + T A P + YTF+G LRP + R VPPHI RPDYADH EGRS EE + G+N I V +I GMR ACR+GREVLD A R VG TTDEIDR HEA +ER YPSP+NYYNFPKS CTSVNE ICHGIPD+R L+DGD+ N+DVT Y GFHGDLNE
Sbjct: 8 LCVTDDCKKPSTLQCPVCLKMGIQGSYFCSQDCFKGSWKEHKVIHLLAKGKETN---AYNP-----WPYYTFTGKLRPFEQTPRRPVPPHIPRPDYADHKEGRSKSEEALR---GNNTIKVLDDEEIEGMRVACRLGREVLDEAARVCDVGVTTDEIDRAVHEACIERECYPSPMNYYNFPKSCCTSVNEVICHGIPDLRPLEDGDLCNVDVTVYHRGFHGDLNE 221
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JL66_LINUN) HSP 1 Score: 268 bits (686), Expect = 5.180e-87 Identity = 129/225 (57.33%), Postives = 154/225 (68.44%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
+C TP C K + CPTCIKLG+ S +C QECFKG W HK IHK AKA + + V+ + + GY+F+G LRP SA R V HI RPDYADHP+G S E + GS I V +I GMR A ++ REVLDAA A+ VG TTDEIDR+ HEA+V+R YPSPLNYYNFPKS CTS+NE ICHGIPDMR L++GDI N+DVT Y G+HGDLNE
Sbjct: 9 LCETPACNKEAKLQCPTCIKLGVEGSFFCSQECFKGSWNEHKKIHKKAKADSQPNDVSNS---YHPWPGYSFTGKLRPYPQSAMRTVGDHIARPDYADHPDGVSHSERSMR---GSTNIKVLNDEEIEGMRVAGKLAREVLDAAAAAIAVGVTTDEIDRIVHEASVDRECYPSPLNYYNFPKSCCTSINEVICHGIPDMRPLENGDICNVDVTVYHRGYHGDLNE 227
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A194QSB9_PAPMA) HSP 1 Score: 267 bits (682), Expect = 1.960e-86 Identity = 131/226 (57.96%), Postives = 150/226 (66.37%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKARAT-ASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
+C TPGC+ + CPTCIKLG+ S +C Q+CFK W HK IH LAK +T S+V P + + F+G LRP R VPPHI RPDYADHP G E +K GS I V +I GMR ACR+GREVLD A RA VG TTDEIDRV HEA +ER YPSPLNY+NFP S CTSVNE ICHGIPD+R L+DGDI N+DVT Y GFHGDLNE
Sbjct: 8 MCETPGCKSIAQLQCPTCIKLGIQGSFFCNQDCFKKSWKSHKIIHSLAKGESTDGSNVEYNP-----WPSFNFTGKLRPFPAGPKRTVPPHIGRPDYADHPTGFPASENAAK---GSGQIKVLDDEEIEGMRVACRLGREVLDEAARACDVGVTTDEIDRVVHEACIERECYPSPLNYHNFPNSCCTSVNEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNE 225
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Match: Methionine (aminopeptidase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L359_9STRA) HSP 1 Score: 269 bits (688), Expect = 2.430e-86 Identity = 131/227 (57.71%), Postives = 161/227 (70.93%), Query Frame = 1
Query: 1 VCTTPGCEKPGTMACPTCIKLGLPA--SRYCFQECFKGDWGRHKAIHKLAKARATASSVATTPAVRREFNGYTFSGDLRPAALSATRVVPPHIRRPDYADHPEGRSMCEEGSKRGGGSNAIPVYTASQIRGMREACRIGREVLDAAGRAVRVGATTDEIDRVTHEATVERNAYPSPLNYYNFPKSVCTSVNESICHGIPDMRELKDGDIVNIDVTAYFGGFHGDLNE 675
+C T GC PG M CPTC K+G+PA S +C Q+CFK W HK +HK+ A A+AS+ +F GY F+G+LRP +S + VP HI+RPDY G + E+ + + G IPVYT ++I GMREACR+GREVLD AGRA+RVG TTDEID + HEA ++R YPSPLNYY+FPKSVCTSVNE ICHGIPD R L+DGDI+NIDVT Y GFHGDLN+
Sbjct: 7 ICATEGCNLPGKMVCPTCKKIGVPAAISSFCTQDCFKKYWPHHKGLHKMFTAEASASTD--------KFFGYQFTGNLRPGKVSPMKTVPEHIKRPDYWS--SGIPVSEQQADKSG---KIPVYTPAEIAGMREACRLGREVLDIAGRAIRVGMTTDEIDAIVHEACMQRECYPSPLNYYHFPKSVCTSVNEVICHGIPDDRPLQDGDILNIDVTVYKNGFHGDLND 220 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9390.17440.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9390.17440.1 >prot_E_fasciculatus_S2_contig9390.17440.1 ID=prot_E_fasciculatus_S2_contig9390.17440.1|Name=mRNA_E_fasciculatus_S2_contig9390.17440.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=228bp VCTTPGCEKPGTMACPTCIKLGLPASRYCFQECFKGDWGRHKAIHKLAKAback to top mRNA from alignment at E_fasciculatus_S2_contig9390:40..4684- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9390.17440.1 ID=mRNA_E_fasciculatus_S2_contig9390.17440.1|Name=mRNA_E_fasciculatus_S2_contig9390.17440.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4645bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9390:40..4684- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9390:40..4684- >mRNA_E_fasciculatus_S2_contig9390.17440.1 ID=mRNA_E_fasciculatus_S2_contig9390.17440.1|Name=mRNA_E_fasciculatus_S2_contig9390.17440.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=684bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9390:40..4684- (Ectocarpus fasciculatus EfasUO2)back to top |