mRNA_E_fasciculatus_S2_contig938.17430.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRU5_9PHAE) HSP 1 Score: 763 bits (1970), Expect = 3.240e-274 Identity = 455/491 (92.67%), Postives = 467/491 (95.11%), Query Frame = 2
Query: 71 MGGIKRSLLAAGLLATTNTS---AYLFPAPSGAGLSSVATSRNIEDRKSSVSRRHGGGSPSPRMSTMSPAAAESTEASSAPAQARGAADLVSSASGAQLASSLIFPSITRQPRPGIIARDGTQDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQRFEQQ-GEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNDNDNPKRIPPAGGRSRPPQRPG 1522
MGGIKRSLLAAGLLATT+T AYLFP PSGAGLSSVATSRNIEDRKSSV R HG SPSPRMSTMSPAA E TEAS AP QARGAADLVSSASGAQLASSLIFPSITRQPRPGIIARDGT+DLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPP+FDI+TEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWN+VLQLKARQRPIYVDGISAYHINSDGLA+RHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKP+GAGAALPTPHAV+GG P+Q FEQQ GEA+ AVGAMFDAARTDSELRGDYMQALSTVLMMDTDG +ESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRN+NDNPKRIPPAGG SRPPQRPG
Sbjct: 1 MGGIKRSLLAAGLLATTSTKTTYAYLFPTPSGAGLSSVATSRNIEDRKSSVCRLHG--SPSPRMSTMSPAA-EGTEAS-APTQARGAADLVSSASGAQLASSLIFPSITRQPRPGIIARDGTEDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKARQRPIYVDGISAYHINSDGLAHRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPSGAGAALPTPHAVIGGAPTQLFEQQQGEAEDAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGVSESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNNAGGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNENDNPKRIPPAGGTSRPPQRPG 487
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ76_ECTSI) HSP 1 Score: 229 bits (585), Expect = 4.780e-67 Identity = 184/351 (52.42%), Postives = 238/351 (67.81%), Query Frame = 2
Query: 446 ERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKARQ-RPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHA---VVGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYM--QALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-WFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNDNDNPKR 1477
E++ + +F NLGKVI TLREDY + +P +F+IYT +++LRDP+GV G+ YKR+F T RF R+T ++D +T FRL+YD S+QQVR+TW++VL RP+++DG S Y ++++GL RHD+ET++VNG V+PPFA AW+ LP+WV++G AGA + + V GG+ F + G G F+ R +L G M Q L+ V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G W LACETS+DCTGG VCCD V++K+CCSNG+ Q K G+LIPSL+PIPGRGR + D +R
Sbjct: 13 EKEKREQTEFNTNLGKVIDTLREDYATMLDEPLNFEIYTPDLQLRDPSGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRITWHLVLDATPMVVRPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMISVSSSSGDVWGGMDD--FNRSGRR--RSGGNFER-RIPVDLSGTAMAFQGLAGVRAASITRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQR 358
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH5_9PHAE) HSP 1 Score: 214 bits (545), Expect = 2.170e-59 Identity = 198/459 (43.14%), Postives = 260/459 (56.64%), Query Frame = 2
Query: 350 AQLASSLIFPSITRQPRPGIIARDGTQDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQ---------------------------------------VRVTWNMVLQLKAR-QRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQ-------------RFEQQGEADVAVGAMFDAARTDSELRGDYM----QALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------------------WFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNDNDNPKR 1477
A AS +FPS+ R P P +G + +E++ + +F NLGKVI TLREDYP + +P +FDIYT +++LRDP+GV G+ YKR+F T RF R+T ++D +T FRL+YD S+QQ VRVTW++VL RP+++DG S Y ++++GL RHDLET++VNG V+PPFA AW+ LP+WV++G AGA T + GGV + +FE++ D++ AM A + +E+R + + L + D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX W LACETS+DCTGG VCCD V++K+CCSNG+ Q K G+LIPSL+PIPGRGR + D +R
Sbjct: 73 ASQASQGVFPSVARSPMPAGEIYEGEK----KEKEKREQAEFNTNLGKVIDTLREDYPTMLDEPLNFDIYTPDLQLRDPSGVILTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQDDEQLLVHPCEMQPWTGRNDWPSVIGSVGNNAPSSRGRVVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDLETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGM--TSVSSSGGVRGEIDDFDRSGRRSGGKFERRIPMDLSGTAM--AFQGLAEVRAASITRRRKGLLAAVGFDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQR 523
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ0_9STRA) HSP 1 Score: 176 bits (446), Expect = 3.490e-47 Identity = 125/372 (33.60%), Postives = 161/372 (43.28%), Query Frame = 2
Query: 362 SSLIFPSITRQPRPGIIARDGTQDLGMRERDDG-KSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKARQ-RPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAY-AWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWFGSKGAELA---------CETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIP 1441
S+L F S+ R + + GM +G ++PDFE NLGKVI TLR DYP + +P + IYT++I ++DP+GV F+GI YKR+FATLRFFR TF++ T FR+TYDW++Q+VRV W+M L KAR P++VD IS YHIN +G HDLET++V A + L WV K GA AA T L+ L D+ G ++G SK LA CE SWDC M CCDF L KVCC+ G+ P P LVPIP
Sbjct: 2 SNLSFSSVARTESSLLEELKRREVFGMPPPPNGNRNPDFEPNLGKVIDTLRSDYPELLNEPLDYSIYTDDITVKDPSGVEFKGIGTYKRLFATLRFFRHTFVDTVDTRFRVTYDWARQRVRVNWHMALSFKARAGHPVFVDCISVYHINDEGFVSAHDLETIMVXXXXXXXXXXXXAMMGL--WVRSE---KGVGAAAAATT----------TAMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAALRGDSSGGGDAGKDR-------------------------------------------------SKAPRLAWPKVDLPSGCEDSWDCESPMTCCDFALFKVCCNQGMGSPVTE---PRLVPIP 306
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A516_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.310e-34 Identity = 95/324 (29.32%), Postives = 138/324 (42.59%), Query Frame = 2
Query: 470 DFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIP 1441
+FE+NLG+ I LR D P S+DIY + ++L DP+GV RG+ NYK+ F +R FR+ ++ TF+L YDWSK+ ++VTW + + YVD SA+H++ G ++H ++ V V GR + PP++ W+ +V AG P P AV PS FE +D+ A+ + + +DG +E+ K CE WDC M CCDFV+ K+CC G+ P F E P LVPIP
Sbjct: 79 EFELNLGRAIDALRSDVPAFADRELSWDIYADNVQLADPSGVQTRGLQNYKQFFGVIRMFRRVMIDKVDITFKLRYDWSKKIIKVTWYSKWYARGSSKAAYVDATSAFHLDEQGKIFKHVVDRVQVGGRPLSPPYSVGWLAFREYVL---------AGLDGPRPAAV----PSFGFEA---SDIGQDALVLMSAMSASXXXXXXXXXXXXX---SDGESEAPPPSKKKAPRNKEKKQKR------------------------------------KLLPGQCEGMWDCDSPMECCDFVMFKMCCRGGLGIPAFLEPAPVLVPIP 347
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBU2_9EUKA) HSP 1 Score: 115 bits (288), Expect = 2.280e-24 Identity = 99/354 (27.97%), Postives = 139/354 (39.27%), Query Frame = 2
Query: 473 FEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLK-----------ARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRA-VEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKF-----GELIPSLVPIPGRGRNDNDNPKRIP 1483
F++N G+ I LR DYPR+F + P I+T+ IEL DP+G G Y+RVF LRF R+T M DA RL D + +RV WN L ++ +++DG+S Y ++ DGL +H LE +V+ G+ + P A+ AW + G A P A++ S EA D R R QA ++ + AA FG G + +CETS+DC MVCCD + VCC+ G+ P G L +PIP R+ P R P
Sbjct: 79 FKLNQGRAIDVLRHDYPRLFTERPDMSIFTDNIELHDPSGKRLAGKKQYERVFDALRFLRRTTMQDAQVGIRLVAD--DKSIRVRWNAKLWMRDPATGLTTLVNGEPALVHIDGVSVYDLDKDGLIRQHRLENIVLTGQEPLATPIQLAF----AWPATGYATPQAAVPFFQPLADALLNFGFSSTSSGASEAGTEGTESEDGRRAAPTRRAPPPQASASDDETPLERAARERAEDAAKQQRLRDLRTPKTAPKSGVDL------------------------FGLTGPQ-SCETSYDCDAPMVCCDLLFATVCCTGGLLIPTADRRMQGSLQRQAIPIPVE-RDRAPQPPRYP 400
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PU43_9EUKA) HSP 1 Score: 110 bits (276), Expect = 8.510e-24 Identity = 58/136 (42.65%), Postives = 84/136 (61.76%), Query Frame = 2
Query: 458 GKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLK----ARQRPIYVDGISAYHINSDGLAYRHDLETVVVNG 853
G+ +FE+N G+VI TLR DYPR+F D P I+ E++ELRD +GV RG Y +VF LRF R+T M+DA T+ + + + +R+ W+ L+L+ QR +DG+S Y ++SDGL H LE +V G
Sbjct: 86 GRPSEFELNQGRVIDTLRYDYPRLFVDKPDLSIFREDVELRDESGVRLRGKGAYSKVFDMLRFLRRTGMSDAEVTYHIFVNDAT--IRMRWSAKLKLRDPAFGMQRLDILDGVSVYELDSDGLVRSHTLEYIVPRG 219
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZVV7_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.840e-22 Identity = 57/165 (34.55%), Postives = 93/165 (56.36%), Query Frame = 2
Query: 401 PGIIARDGTQDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVF----ATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKAR----QRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPP 871
P +++D +D + +FE+NLG+ + LR+DYP + P F+IY ++IE+ DP+GV G+ NY++ F A + FF ++ TFRL YD ++ +RV+WN L + + ++VDGIS Y +N +G+ RH LE ++VN V+ P
Sbjct: 75 PSTLSKDSARDDAALHMVVDERREFEINLGRAVDRLRKDYPDMLVANPDFEIYHDDIEVIDPSGVKLHGLGNYEKAFSFIHAVINFFYCK--EESGLTFRLHYDAERRNIRVSWNAFLVPRTIYGGVRNKLHVDGISVYELNREGIVMRHKLERILVNNVPVKEP 237
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y840_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.390e-22 Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 2
Query: 476 EVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLK----------ARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVS 910
+ + ++ TLR+DYP +F P IYT++IE+ DP+GV G +NY+R++A LR ++ M DA + + Y + VRV W++ + LK + Q PI +DGIS YH+NSDGL Y+H +E + N + A A+ +L AW +
Sbjct: 89 QPKICNILDTLRDDYPYLFDQEPDLSIYTDDIEVTDPSGVPLIGKTNYQRMWAGLRAMKRYAMRDARLRYSMLYCQASNTVRVFWSVDVVLKPAIALYIAAGSEQEPIRIDGISVYHVNSDGLVYKHSVENLNYNNKLNRYIEAAAF-DLQAWAA 242
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WID0_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.550e-19 Identity = 50/140 (35.71%), Postives = 83/140 (59.29%), Query Frame = 2
Query: 461 KSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFM--NDATTTFRLTYDWSKQQVRVTWNMVLQLK---ARQRPIYVDGISAYHINSD-GLAYRHDLETVVVNGRAV 862
K FE+ LGKV+ TL++DYP I P + IY +EI++ DP+GV + NYK F+ + F ++ F+L YDW+++ +RV+WN+VL+ + +Y++GIS Y +N+ GL +H +E +++N V
Sbjct: 90 KQRQFELKLGKVMDTLKKDYPDILKSDPDYSIYDDEIDVIDPSGVKLHSLKNYKGFFSLMHTVVSMFYCPQESRIQFKLAYDWARKSIRVSWNVVLRPRLHIGNNNDLYINGISVYEMNTQSGLLTQHRVEHLLINNAPV 229 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig938.17430.1 >prot_E_fasciculatus_S2_contig938.17430.1 ID=prot_E_fasciculatus_S2_contig938.17430.1|Name=mRNA_E_fasciculatus_S2_contig938.17430.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=487bp MGGIKRSLLAAGLLATTNTSAYLFPAPSGAGLSSVATSRNIEDRKSSVSRback to top mRNA from alignment at E_fasciculatus_S2_contig938:7774..10292+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig938.17430.1 ID=mRNA_E_fasciculatus_S2_contig938.17430.1|Name=mRNA_E_fasciculatus_S2_contig938.17430.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2519bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig938:7774..10292+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig938:7774..10292+ >mRNA_E_fasciculatus_S2_contig938.17430.1 ID=mRNA_E_fasciculatus_S2_contig938.17430.1|Name=mRNA_E_fasciculatus_S2_contig938.17430.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1461bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig938:7774..10292+ (Ectocarpus fasciculatus EfasUO2)back to top |