mRNA_E_fasciculatus_S2_contig938.17430.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig938.17430.1
Unique NamemRNA_E_fasciculatus_S2_contig938.17430.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRU5_9PHAE)

HSP 1 Score: 763 bits (1970), Expect = 3.240e-274
Identity = 455/491 (92.67%), Postives = 467/491 (95.11%), Query Frame = 2
Query:   71 MGGIKRSLLAAGLLATTNTS---AYLFPAPSGAGLSSVATSRNIEDRKSSVSRRHGGGSPSPRMSTMSPAAAESTEASSAPAQARGAADLVSSASGAQLASSLIFPSITRQPRPGIIARDGTQDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQRFEQQ-GEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNDNDNPKRIPPAGGRSRPPQRPG 1522
            MGGIKRSLLAAGLLATT+T    AYLFP PSGAGLSSVATSRNIEDRKSSV R HG  SPSPRMSTMSPAA E TEAS AP QARGAADLVSSASGAQLASSLIFPSITRQPRPGIIARDGT+DLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPP+FDI+TEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWN+VLQLKARQRPIYVDGISAYHINSDGLA+RHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKP+GAGAALPTPHAV+GG P+Q FEQQ GEA+ AVGAMFDAARTDSELRGDYMQALSTVLMMDTDG +ESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRN+NDNPKRIPPAGG SRPPQRPG
Sbjct:    1 MGGIKRSLLAAGLLATTSTKTTYAYLFPTPSGAGLSSVATSRNIEDRKSSVCRLHG--SPSPRMSTMSPAA-EGTEAS-APTQARGAADLVSSASGAQLASSLIFPSITRQPRPGIIARDGTEDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKARQRPIYVDGISAYHINSDGLAHRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPSGAGAALPTPHAVIGGAPTQLFEQQQGEAEDAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGVSESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNNAGGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNENDNPKRIPPAGGTSRPPQRPG 487          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ76_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 4.780e-67
Identity = 184/351 (52.42%), Postives = 238/351 (67.81%), Query Frame = 2
Query:  446 ERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKARQ-RPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHA---VVGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYM--QALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-WFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNDNDNPKR 1477
            E++  +  +F  NLGKVI TLREDY  +  +P +F+IYT +++LRDP+GV   G+  YKR+F T RF R+T ++D +T FRL+YD S+QQVR+TW++VL       RP+++DG S Y ++++GL  RHD+ET++VNG  V+PPFA AW+ LP+WV++G     AGA   +    +   V GG+    F + G      G  F+  R   +L G  M  Q L+ V            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G W       LACETS+DCTGG VCCD V++K+CCSNG+ Q K G+LIPSL+PIPGRGR + D  +R
Sbjct:   13 EKEKREQTEFNTNLGKVIDTLREDYATMLDEPLNFEIYTPDLQLRDPSGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRITWHLVLDATPMVVRPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMISVSSSSGDVWGGMDD--FNRSGRR--RSGGNFER-RIPVDLSGTAMAFQGLAGVRAASITRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQR 358          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH5_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 2.170e-59
Identity = 198/459 (43.14%), Postives = 260/459 (56.64%), Query Frame = 2
Query:  350 AQLASSLIFPSITRQPRPGIIARDGTQDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQ---------------------------------------VRVTWNMVLQLKAR-QRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQ-------------RFEQQGEADVAVGAMFDAARTDSELRGDYM----QALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------------------WFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNDNDNPKR 1477
            A  AS  +FPS+ R P P     +G +    +E++  +  +F  NLGKVI TLREDYP +  +P +FDIYT +++LRDP+GV   G+  YKR+F T RF R+T ++D +T FRL+YD S+QQ                                       VRVTW++VL       RP+++DG S Y ++++GL  RHDLET++VNG  V+PPFA AW+ LP+WV++G     AGA     T  +  GGV  +             +FE++   D++  AM  A +  +E+R   +    + L   +  D        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                           W       LACETS+DCTGG VCCD V++K+CCSNG+ Q K G+LIPSL+PIPGRGR + D  +R
Sbjct:   73 ASQASQGVFPSVARSPMPAGEIYEGEK----KEKEKREQAEFNTNLGKVIDTLREDYPTMLDEPLNFDIYTPDLQLRDPSGVILTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQDDEQLLVHPCEMQPWTGRNDWPSVIGSVGNNAPSSRGRVVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDLETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGM--TSVSSSGGVRGEIDDFDRSGRRSGGKFERRIPMDLSGTAM--AFQGLAEVRAASITRRRKGLLAAVGFDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELDQCQR 523          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.490e-47
Identity = 125/372 (33.60%), Postives = 161/372 (43.28%), Query Frame = 2
Query:  362 SSLIFPSITRQPRPGIIARDGTQDLGMRERDDG-KSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKARQ-RPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAY-AWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWFGSKGAELA---------CETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIP 1441
            S+L F S+ R     +      +  GM    +G ++PDFE NLGKVI TLR DYP +  +P  + IYT++I ++DP+GV F+GI  YKR+FATLRFFR TF++   T FR+TYDW++Q+VRV W+M L  KAR   P++VD IS YHIN +G    HDLET++V            A + L  WV      K  GA AA  T                                           L+  L  D+ G  ++G                                                    SK   LA         CE SWDC   M CCDF L KVCC+ G+  P      P LVPIP
Sbjct:    2 SNLSFSSVARTESSLLEELKRREVFGMPPPPNGNRNPDFEPNLGKVIDTLRSDYPELLNEPLDYSIYTDDITVKDPSGVEFKGIGTYKRLFATLRFFRHTFVDTVDTRFRVTYDWARQRVRVNWHMALSFKARAGHPVFVDCISVYHINDEGFVSAHDLETIMVXXXXXXXXXXXXAMMGL--WVRSE---KGVGAAAAATT----------TAMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAALRGDSSGGGDAGKDR-------------------------------------------------SKAPRLAWPKVDLPSGCEDSWDCESPMTCCDFALFKVCCNQGMGSPVTE---PRLVPIP 306          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A516_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.310e-34
Identity = 95/324 (29.32%), Postives = 138/324 (42.59%), Query Frame = 2
Query:  470 DFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIP 1441
            +FE+NLG+ I  LR D P       S+DIY + ++L DP+GV  RG+ NYK+ F  +R FR+  ++    TF+L YDWSK+ ++VTW      +   +  YVD  SA+H++  G  ++H ++ V V GR + PP++  W+    +V          AG   P P AV    PS  FE    +D+   A+   +   +                 +DG +E+                                                      K     CE  WDC   M CCDFV+ K+CC  G+  P F E  P LVPIP
Sbjct:   79 EFELNLGRAIDALRSDVPAFADRELSWDIYADNVQLADPSGVQTRGLQNYKQFFGVIRMFRRVMIDKVDITFKLRYDWSKKIIKVTWYSKWYARGSSKAAYVDATSAFHLDEQGKIFKHVVDRVQVGGRPLSPPYSVGWLAFREYVL---------AGLDGPRPAAV----PSFGFEA---SDIGQDALVLMSAMSASXXXXXXXXXXXXX---SDGESEAPPPSKKKAPRNKEKKQKR------------------------------------KLLPGQCEGMWDCDSPMECCDFVMFKMCCRGGLGIPAFLEPAPVLVPIP 347          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBU2_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 2.280e-24
Identity = 99/354 (27.97%), Postives = 139/354 (39.27%), Query Frame = 2
Query:  473 FEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLK-----------ARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRA-VEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAVVGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGAAESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKF-----GELIPSLVPIPGRGRNDNDNPKRIP 1483
            F++N G+ I  LR DYPR+F + P   I+T+ IEL DP+G    G   Y+RVF  LRF R+T M DA    RL  D   + +RV WN  L ++                +++DG+S Y ++ DGL  +H LE +V+ G+  +  P   A+    AW + G     A      P   A++    S       EA        D  R     R    QA ++      + AA                                                     FG  G + +CETS+DC   MVCCD +   VCC+ G+  P       G L    +PIP   R+    P R P
Sbjct:   79 FKLNQGRAIDVLRHDYPRLFTERPDMSIFTDNIELHDPSGKRLAGKKQYERVFDALRFLRRTTMQDAQVGIRLVAD--DKSIRVRWNAKLWMRDPATGLTTLVNGEPALVHIDGVSVYDLDKDGLIRQHRLENIVLTGQEPLATPIQLAF----AWPATGYATPQAAVPFFQPLADALLNFGFSSTSSGASEAGTEGTESEDGRRAAPTRRAPPPQASASDDETPLERAARERAEDAAKQQRLRDLRTPKTAPKSGVDL------------------------FGLTGPQ-SCETSYDCDAPMVCCDLLFATVCCTGGLLIPTADRRMQGSLQRQAIPIPVE-RDRAPQPPRYP 400          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PU43_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 8.510e-24
Identity = 58/136 (42.65%), Postives = 84/136 (61.76%), Query Frame = 2
Query:  458 GKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLK----ARQRPIYVDGISAYHINSDGLAYRHDLETVVVNG 853
            G+  +FE+N G+VI TLR DYPR+F D P   I+ E++ELRD +GV  RG   Y +VF  LRF R+T M+DA  T+ +  + +   +R+ W+  L+L+      QR   +DG+S Y ++SDGL   H LE +V  G
Sbjct:   86 GRPSEFELNQGRVIDTLRYDYPRLFVDKPDLSIFREDVELRDESGVRLRGKGAYSKVFDMLRFLRRTGMSDAEVTYHIFVNDAT--IRMRWSAKLKLRDPAFGMQRLDILDGVSVYELDSDGLVRSHTLEYIVPRG 219          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZVV7_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.840e-22
Identity = 57/165 (34.55%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  401 PGIIARDGTQDLGMRERDDGKSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVF----ATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLKAR----QRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPP 871
            P  +++D  +D         +  +FE+NLG+ +  LR+DYP +    P F+IY ++IE+ DP+GV   G+ NY++ F    A + FF      ++  TFRL YD  ++ +RV+WN  L  +      +  ++VDGIS Y +N +G+  RH LE ++VN   V+ P
Sbjct:   75 PSTLSKDSARDDAALHMVVDERREFEINLGRAVDRLRKDYPDMLVANPDFEIYHDDIEVIDPSGVKLHGLGNYEKAFSFIHAVINFFYCK--EESGLTFRLHYDAERRNIRVSWNAFLVPRTIYGGVRNKLHVDGISVYELNREGIVMRHKLERILVNNVPVKEP 237          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y840_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.390e-22
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = 2
Query:  476 EVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNMVLQLK----------ARQRPIYVDGISAYHINSDGLAYRHDLETVVVNGRAVEPPFAYAWINLPAWVS 910
            +  +  ++ TLR+DYP +F   P   IYT++IE+ DP+GV   G +NY+R++A LR  ++  M DA   + + Y  +   VRV W++ + LK          + Q PI +DGIS YH+NSDGL Y+H +E +  N +      A A+ +L AW +
Sbjct:   89 QPKICNILDTLRDDYPYLFDQEPDLSIYTDDIEVTDPSGVPLIGKTNYQRMWAGLRAMKRYAMRDARLRYSMLYCQASNTVRVFWSVDVVLKPAIALYIAAGSEQEPIRIDGISVYHVNSDGLVYKHSVENLNYNNKLNRYIEAAAF-DLQAWAA 242          
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WID0_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.550e-19
Identity = 50/140 (35.71%), Postives = 83/140 (59.29%), Query Frame = 2
Query:  461 KSPDFEVNLGKVISTLREDYPRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFM--NDATTTFRLTYDWSKQQVRVTWNMVLQLK---ARQRPIYVDGISAYHINSD-GLAYRHDLETVVVNGRAV 862
            K   FE+ LGKV+ TL++DYP I    P + IY +EI++ DP+GV    + NYK  F+ +      F    ++   F+L YDW+++ +RV+WN+VL+ +        +Y++GIS Y +N+  GL  +H +E +++N   V
Sbjct:   90 KQRQFELKLGKVMDTLKKDYPDILKSDPDYSIYDDEIDVIDPSGVKLHSLKNYKGFFSLMHTVVSMFYCPQESRIQFKLAYDWARKSIRVSWNVVLRPRLHIGNNNDLYINGISVYEMNTQSGLLTQHRVEHLLINNAPV 229          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig938.17430.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.240e-27492.67protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Uncharacterized4.780e-6752.42protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.170e-5943.14protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.490e-4733.60protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.310e-3429.32protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized2.280e-2427.97protein n=1 Tax=Chrysochromulina tobinii TaxID=146... [more]
Hypothetical8.510e-2442.65protein (Fragment) n=1 Tax=Coccolithus braarudii T... [more]
Hypothetical2.840e-2234.55protein (Fragment) n=3 Tax=Ditylum brightwellii Ta... [more]
Hypothetical4.390e-2236.77protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Hypothetical3.550e-1935.71protein n=1 Tax=Eucampia antarctica TaxID=49252 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig938contigE_fasciculatus_S2_contig938:7774..10292 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score693.0
Seed ortholog evalue1e-196
Seed eggNOG ortholog2880.D8LGI3
Model size1566
Hectar predicted targeting categorychloroplast
Exons2
EggNOG free text desc.Uncharacterized conserved protein (DUF2358)
EggNOG OGs2CYHV@1,2S4H3@2759
Ec32 ortholog descriptionProtein of unknown function DUF2358
Ec32 orthologEc-10_001970.1
Cds size1461
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842587.1592975-UTR-E_fasciculatus_S2_contig938:7773..78431696842587.1592975-UTR-E_fasciculatus_S2_contig938:7773..7843Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig938 7774..7843 +
1696842587.2065127-UTR-E_fasciculatus_S2_contig938:10257..102921696842587.2065127-UTR-E_fasciculatus_S2_contig938:10257..10292Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig938 10258..10292 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842587.1822133-CDS-E_fasciculatus_S2_contig938:7843..83591696842587.1822133-CDS-E_fasciculatus_S2_contig938:7843..8359Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig938 7844..8359 +
1696842587.196619-CDS-E_fasciculatus_S2_contig938:9312..102571696842587.196619-CDS-E_fasciculatus_S2_contig938:9312..10257Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig938 9313..10257 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig938.17430.1prot_E_fasciculatus_S2_contig938.17430.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig938 7844..10257 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig938.17430.1

>prot_E_fasciculatus_S2_contig938.17430.1 ID=prot_E_fasciculatus_S2_contig938.17430.1|Name=mRNA_E_fasciculatus_S2_contig938.17430.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=487bp
MGGIKRSLLAAGLLATTNTSAYLFPAPSGAGLSSVATSRNIEDRKSSVSR
RHGGGSPSPRMSTMSPAAAESTEASSAPAQARGAADLVSSASGAQLASSL
IFPSITRQPRPGIIARDGTQDLGMRERDDGKSPDFEVNLGKVISTLREDY
PRIFFDPPSFDIYTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMND
ATTTFRLTYDWSKQQVRVTWNMVLQLKARQRPIYVDGISAYHINSDGLAY
RHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPAGAGAALPTPHAV
VGGVPSQRFEQQGEADVAVGAMFDAARTDSELRGDYMQALSTVLMMDTDG
AAESGGGEGAAGAAPDGADGDEDGAASAAAAAATAAANKKRATAEKEKEK
NGGGWFGSKGAELACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELI
PSLVPIPGRGRNDNDNPKRIPPAGGRSRPPQRPGTW*
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mRNA from alignment at E_fasciculatus_S2_contig938:7774..10292+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig938.17430.1 ID=mRNA_E_fasciculatus_S2_contig938.17430.1|Name=mRNA_E_fasciculatus_S2_contig938.17430.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2519bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig938:7774..10292+ (Ectocarpus fasciculatus EfasUO2)
CAAACGTCCGACGTTCCTTTCGCTCCGCTCCCTCCCCCCTAGCACAAAGA GACACACCAAGCTTAAAGCCATGGGCGGCATCAAGAGGAGCCTCCTGGCC GCGGGACTTCTAGCCACCACCAATACCTCCGCCTACCTCTTTCCGGCGCC GTCAGGGGCAGGGCTCTCAAGCGTGGCCACCTCGAGGAACATCGAGGACA GAAAAAGCAGCGTAAGCCGCCGGCATGGCGGCGGCTCCCCCTCCCCCCGG ATGTCGACGATGTCTCCAGCGGCGGCGGAGAGCACCGAGGCGTCGTCCGC ACCAGCACAGGCGAGAGGGGCGGCGGACCTCGTCAGCAGCGCCAGCGGCG CGCAGCTCGCCTCGTCCTTGATTTTTCCCAGCATCACGAGGCAGCCGCGG CCCGGCATAATCGCGCGCGACGGCACGCAGGACTTGGGCATGAGAGAGAG GGACGACGGCAAGAGCCCCGACTTCGAGGTGAACCTGGGCAAGGTGATCT CCACGCTGAGGGAGGACTACCCGCGTATATTCTTCGACCCGCCCTCGTTC GACATCTACACGGAGGAGATCGAGCTGCGCGATCCGGTAAGGAAAAAAGT CGTGCCCTCTGTGAGACTCCGCTTATATACAGCAGCATTTCGTCCTTGCG GAGAACATCCACCCCCGAGCCCTTCTGAAGTCTGAAGGCTGCTGCTGCGG TTGAGGCCTCACCGTTCCCCCGTCGAGGATGTGGTGGTGGTCCTTGGCTG GGGTAGTTGCCTGCTCGTGTGATGCCCAGCCGTGTTCTCTTGAGTACGGA GAGAGCGAGAACGAGTTTCGTGGCGGTTTGTCTTGATTTTAGCGGACTGT CCTTGAAGTACGTTGCGCTCTGATCGAGAATCGTACTTTTGTGACTGCTT GCTGTCTGACTGGGTATGGGTGGCGGTTGACAACGCTTTCTTTTCTTTTC TGGGTCAGGTTCTCTCTCAGGTGCCACACAGCTGATGGCTGGCGAGTTTT CGTTGTGACTGAGCGCGGCGTGTAATGATAGACAGGAGTGTGGGCCGGTT TCTTGAAGTGCATTTAATTTTGCTCTGGGCAACGTACTGCCCACGTACTT TTTGGTGTACACTGCTGTCTATCAAAGCGCTATTGTACCTACACGAGCAG TCTTGGAATTTTGAATTTTGCCGAAATTCTCGCTTTGTACACGTGACGTC TTCTTTCGGATTCAAGTTCGACCTACGCTGTCCATGTCGTTGTCGTAAGA TGGAGGGACAGACCAGGTCGCATGTCTGAACGACAGGCAGCGACTACTGC TGTACACGCTGCTGTGCCCTCATGAGTCAGTCTTGATTTCGTGATGGTGA GCGGGTACCCCCACAAGGGGAGAATTAAGTCCAACGCGGAAAAACGATGC CGCTTTTTGGTCTTGGCGGGCCTCTCAAGCCTGCGCTATTATATAGCAAG TCCCGAGAACACCATTTTTTGCCCGTTGGTCGCACGCCCGCCTTTTGCTG ACCCCCTTTCTCCCTACATATTGCAAACCGTTACAACAGACGGGAGTGGC GTTCCGAGGCATCTCGAACTACAAGCGAGTGTTCGCGACGCTCCGCTTCT TCCGGCAGACGTTCATGAACGACGCCACGACCACCTTCCGCCTCACCTAC GACTGGAGCAAGCAGCAGGTGCGCGTAACGTGGAACATGGTGCTCCAGCT CAAGGCCCGGCAGCGGCCCATCTACGTGGACGGCATCTCCGCCTACCACA TCAACAGCGACGGCCTCGCCTACCGCCACGACCTGGAGACGGTGGTCGTC AACGGCCGCGCCGTCGAGCCCCCGTTCGCCTACGCGTGGATCAACCTCCC CGCCTGGGTCTCGCGCGGGGCGGTGGCCAAGCCGGCGGGCGCGGGCGCGG CCCTCCCTACCCCCCACGCGGTAGTCGGCGGGGTCCCCTCGCAGCGGTTC GAGCAGCAGGGGGAGGCGGACGTGGCCGTCGGCGCCATGTTTGACGCCGC TAGGACAGACTCCGAGCTCCGCGGGGACTACATGCAGGCGCTGTCGACGG TGCTGATGATGGACACGGACGGGGCGGCAGAGAGCGGCGGGGGTGAGGGC GCCGCCGGTGCGGCGCCGGACGGGGCGGACGGCGATGAGGACGGGGCAGC ATCAGCAGCAGCAGCAGCCGCCACCGCCGCCGCGAACAAGAAGAGGGCGA CGGCGGAGAAGGAGAAGGAGAAGAACGGGGGCGGGTGGTTCGGCTCCAAG GGTGCGGAGCTCGCGTGTGAGACGTCCTGGGACTGCACCGGCGGCATGGT CTGCTGCGACTTCGTCCTCCTCAAGGTGTGCTGCAGCAACGGCATCCGGC AGCCCAAGTTCGGCGAGCTCATCCCGAGCCTGGTGCCCATTCCCGGAAGA GGAAGGAACGACAACGACAACCCCAAGAGAATTCCGCCCGCCGGAGGTAG ATCGCGGCCTCCTCAACGACCGGGCACTTGGTAATTTTTTCTTTTCGTTT CGTTTCGTGTGTTTACTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig938:7774..10292+

>mRNA_E_fasciculatus_S2_contig938.17430.1 ID=mRNA_E_fasciculatus_S2_contig938.17430.1|Name=mRNA_E_fasciculatus_S2_contig938.17430.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1461bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig938:7774..10292+ (Ectocarpus fasciculatus EfasUO2)
ATGGGCGGCATCAAGAGGAGCCTCCTGGCCGCGGGACTTCTAGCCACCAC
CAATACCTCCGCCTACCTCTTTCCGGCGCCGTCAGGGGCAGGGCTCTCAA
GCGTGGCCACCTCGAGGAACATCGAGGACAGAAAAAGCAGCGTAAGCCGC
CGGCATGGCGGCGGCTCCCCCTCCCCCCGGATGTCGACGATGTCTCCAGC
GGCGGCGGAGAGCACCGAGGCGTCGTCCGCACCAGCACAGGCGAGAGGGG
CGGCGGACCTCGTCAGCAGCGCCAGCGGCGCGCAGCTCGCCTCGTCCTTG
ATTTTTCCCAGCATCACGAGGCAGCCGCGGCCCGGCATAATCGCGCGCGA
CGGCACGCAGGACTTGGGCATGAGAGAGAGGGACGACGGCAAGAGCCCCG
ACTTCGAGGTGAACCTGGGCAAGGTGATCTCCACGCTGAGGGAGGACTAC
CCGCGTATATTCTTCGACCCGCCCTCGTTCGACATCTACACGGAGGAGAT
CGAGCTGCGCGATCCGACGGGAGTGGCGTTCCGAGGCATCTCGAACTACA
AGCGAGTGTTCGCGACGCTCCGCTTCTTCCGGCAGACGTTCATGAACGAC
GCCACGACCACCTTCCGCCTCACCTACGACTGGAGCAAGCAGCAGGTGCG
CGTAACGTGGAACATGGTGCTCCAGCTCAAGGCCCGGCAGCGGCCCATCT
ACGTGGACGGCATCTCCGCCTACCACATCAACAGCGACGGCCTCGCCTAC
CGCCACGACCTGGAGACGGTGGTCGTCAACGGCCGCGCCGTCGAGCCCCC
GTTCGCCTACGCGTGGATCAACCTCCCCGCCTGGGTCTCGCGCGGGGCGG
TGGCCAAGCCGGCGGGCGCGGGCGCGGCCCTCCCTACCCCCCACGCGGTA
GTCGGCGGGGTCCCCTCGCAGCGGTTCGAGCAGCAGGGGGAGGCGGACGT
GGCCGTCGGCGCCATGTTTGACGCCGCTAGGACAGACTCCGAGCTCCGCG
GGGACTACATGCAGGCGCTGTCGACGGTGCTGATGATGGACACGGACGGG
GCGGCAGAGAGCGGCGGGGGTGAGGGCGCCGCCGGTGCGGCGCCGGACGG
GGCGGACGGCGATGAGGACGGGGCAGCATCAGCAGCAGCAGCAGCCGCCA
CCGCCGCCGCGAACAAGAAGAGGGCGACGGCGGAGAAGGAGAAGGAGAAG
AACGGGGGCGGGTGGTTCGGCTCCAAGGGTGCGGAGCTCGCGTGTGAGAC
GTCCTGGGACTGCACCGGCGGCATGGTCTGCTGCGACTTCGTCCTCCTCA
AGGTGTGCTGCAGCAACGGCATCCGGCAGCCCAAGTTCGGCGAGCTCATC
CCGAGCCTGGTGCCCATTCCCGGAAGAGGAAGGAACGACAACGACAACCC
CAAGAGAATTCCGCCCGCCGGAGGTAGATCGCGGCCTCCTCAACGACCGG
GCACTTGGTAA
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