mRNA_E_fasciculatus_S2_contig9320.17381.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU40_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 1.530e-18 Identity = 109/398 (27.39%), Postives = 164/398 (41.21%), Query Frame = 2
Query: 56 LTVMNSAATGNRAAMINTLIGLGIDVHGSRDGPIPLESAIESHSPDALSALVAHGADVNKANAVDLTPLQVAVPWAHIGRG---------------ILKALLAAGANPDVGGNGASVLLEALGSFDFRKIATVLLAGGANINA-------------CGLNGVTALIEAAAM-DEADDIDFLVQKGADMDLSTFEDERTALHVACS-RMCARAVTSLLRHGADVNVDDGTGNTPLHLAAMAGGSSPRQALSIVDCLXXXXXXXXXXNDDGRTPCERVRRELTASKYTKTVLGVLARAPRDRTWRRRAPWVLCRAYADKPRPQPQVRAVKPRLFLWRDILDCASDDSSGDEAAQDAPADVHGNDNDASEXXXXXXIDFSEVAARVAELDEGTFRAVISYL 1159
LT ++ AA G + + L+G G D +G P+ A E++SP+A+ ALV HGAD + +++ PL A ++ + LL A VL + S D + LL GA++N CG N V L++A A+ D +D LV LH AC+ + V LL HGA+VN+ D G + LHL A+ R + +VD L N D TP + R + + ++ VL +L AP DR WRRR +LC PQ + + P + A D ++ + +D H N N +S DFS + AR+ + +G FR ++ YL
Sbjct: 81 LTALHHAAAGTKLDAMEFLVGSGADANGGALKWRPIHFATEANSPEAVLALVRHGADPHAEDSLGRPPLCCAADRGNMXXXXXXXXXXXXXXXXHEVCPPLLFA------------VLSRSNNSEDMTR---ALLQHGADVNELDDYEIAINEAVRCG-NVVKLLLKAGALVDGHNDFHGLVL--------------APLHAACNFSLSCDVVKVLLGHGANVNLQDSEGTSALHLTAV------RFSSRLVDLLLRHGADETINNGDSSTPADCARLKAGHQEASRPVLRLLGGAPADRAWRRRGRVLLCST-------PPQQKRLGPGETRTKMTRVTAGDGAAARGGTSEVGSDAHSNSNGSS--------DFSSLMARLFDRPQGVFRKIVCYL 427
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ8_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 3.150e-16 Identity = 87/278 (31.29%), Postives = 124/278 (44.60%), Query Frame = 2
Query: 2 LRALVRHGADLKACSENGLTVMNSAATGNRAAMINTLIGLGIDVHGSRDGPIPLESAIESHSPDALSALVAHGADVNKANAVDLTPLQVAVPWAHIGRGILKALLAAGANPDVGGNGASVLLEALGS----FDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDIDFLVQKGADMDLSTFEDERTALHVACSRMCARAVTSLLRHGADVNVDDGTGNTPLHLAAMA-GGSSPRQALSIVDCLXXXXXXXXXXNDDGRTPCERVRRELTASKY 820
+ L++HGAD S LT ++ AA GN A I+ LI G + G P+ HGAD++ TPL AV W ++ +KALLAAGANP++ GN +VL ++ S D+ + LL GA +NA + T L AA D + LV+ GA + + + RT LH ACS V +LL HG +N D +A A G + L +++ L N D TP V + L+ S+Y
Sbjct: 290 METLLKHGADPSTRSWRNLTALHKAAEGNEAEAIDVLIKAGAVISGPAGFDSPVXXXXXXXXXXXXXXXXRHGADLDWHEEAGTTPLFRAVQWRYLEA--VKALLAAGANPNISGNSETVLFASISSEISEIDWGVL-LALLESGAKVNAANDDSDTPLHAAAKCDPWA-VHALVRLGAKVVPDS--NGRTPLHAACSFHNLETVAALLTHGPAINALDQXXXXXXXMAVGAEAGDNGGSKLELLEMLVAAGADQLAKNKDDDTP---VSKALSLSRY 558
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 1.640e-11 Identity = 90/328 (27.44%), Postives = 141/328 (42.99%), Query Frame = 2
Query: 44 SENGLTVMNSAATGNRAAMINTLIGLGIDVH--GSRDGPIPLESAIESHSPDALSALVAHGADVN---KANAVDLTPLQVAVPWA------------------HIGRGILKALLAAGANPDVGGNGASVLLEALGSFDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDIDFLVQKGADMDLS-TFEDERTALHVACSRMCARAVTSLLRHGADVNVDDGTGNTPLHLAAMAGGSSPRQALSIVDCLXXXXXXXXXXNDDGRTPCE---RVRRELTASK--------YTKTVLGVLARAPRDRTWRRRAPWVLCRAYADKPR 922
S G + + + G A LI G DV+ D PL +A+++ D + L+ GA+ N + + TPL A H+ +K LLAAGA+ D+ + L ++ + LL G ++N G + L AA + I L+ GAD+D+ +F D RT+LH A A+ +LLR GA+V+ G+T LHL + G +P VD L + +G+ P + RV+R +++ + + +LARAP DRTWRRR ++ R +K R
Sbjct: 100 SSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVAT--VKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVNV-GEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDT---VDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKER 421
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: SMI1_KNR4 (domain-containing protein n=1 Tax=Cystobacter ferrugineus TaxID=83449 RepID=A0A1L9B0C4_9DELT) HSP 1 Score: 77.4 bits (189), Expect = 3.020e-11 Identity = 78/239 (32.64%), Postives = 120/239 (50.21%), Query Frame = 2
Query: 14 VRHGADLKACSENGLTVMNSAATGNRAAMINTLIGLGIDVHG-SRDGPIPLESAIESHSPDALSA---LVAHGADVN-----KANAVDLTPLQVAVPWAHIGRGILKALLAAGANPD-VGGNGASVLLEALGSFDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDIDFLVQKGADMDLSTFEDE-RTALHVACS------RMCARAVTSLLRHGADVNVDDGTGNTPLHLAA 679
++ GA+ A ++ G T ++SAA A ++ L+ G DV+G + D I L A +A++ L+A G++VN +A + LT L IL+ LL AGA+P+ G + L+ A G ++A +LL GA +NA G G+TAL+ A A ++ L+ KGAD+ +T + E T L +A + A + LLR GA+ N + G TPLH AA
Sbjct: 30 LKAGANPNARNQEGHTALHSAAANASAEIVELLLEAGADVNGPASDSAIALCFATAHTGDNAVAMVKQLIARGSNVNHQWEDEARSTVLTDLLNQENNEEPSAEILRTLLHAGADPNRPNGQNETPLMLAAGYKQQPELAELLLEHGAQVNAVGRWGMTALMHAIQCGNAPLVERLIAKGADIHQATEDTEGNTPLTLALNLDELHGEPSADVLGVLLRAGANPNTPNARGWTPLHFAA 268
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: E3 (ubiquitin-protein ligase MIB1-like isoform X1 n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72E99F) HSP 1 Score: 73.2 bits (178), Expect = 1.050e-9 Identity = 73/234 (31.20%), Postives = 109/234 (46.58%), Query Frame = 2
Query: 2 LRALVRHGADLKAC--SENGLTVMNSAATGNRAAMINTLIGLGIDV-HGSRDGPIPLESAIESHSPDALSALVAHGADVNKANAVDLTPLQVAVPWAHIGRGILKALLAAGANPDVG-----GNGASVLLEALGSFDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDIDFLV-QKGADMDLSTFEDERTALHVACSRMCARAVTSLLRHGADVNVDDGTGNTPLHLA 676
+R L+ GAD+ C ++ T M++A G ++ L+ LG + H G + AI+ A+ AL HGADVN+ + TP+ +A+ I++ALL+ P+V N + L A + R + +L + +N T L AA D + + LV GAD+++ TALH AC +LL GADVNV D G+TPLHLA
Sbjct: 536 VRVLLELGADVSRCVSDDSDKTPMSAALEGKNEDLVELLLELGANKEHWYSPGVTAIHLAIKYSLVGAVLALAKHGADVNRKHLGGKTPIHMAIELKKTD--IVEALLSL---PEVDIEIEDDNSFNALQLACLRDNPRAVELILKRDKSGVNKRRKGDSTPLHIAAYNDHVECVRLLVINGGADVNMRNKRKNGTALHNACLTGKFATAEALLELGADVNVVDADGDTPLHLA 764
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 3.810e-9 Identity = 95/346 (27.46%), Postives = 145/346 (41.91%), Query Frame = 2
Query: 5 RALVRHGADLKACSENGLTVMNSAATGNRAAMINTLIGLGIDVHGSR--DGPIPLESAIESHSPDALSALVAHG-ADVNKANAVDLTPLQVAVPWAHIGRGILKALLAAGANPDVGGNGASVL----LEALGSFDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDIDFLVQKGADMDLSTFEDER--TALHVACSRMCARAVTSLLRHGADVNVDDGTGNTPLHLAAMAGGSSPRQALSIVDCLXXXXXXXXXXNDDGRTPCERVRRELTASKY-----------TKTVLG-----------------VLARAPRDRTWRRRAPWVLCRAYADKPRPQP 931
+ L+ GAD+ V A R + L+ +G SR G PL A S + +S L+ + DV+ ++ ++PL VA H ++ALL AGA+ ++ G + L ++ S + ++ G N+ A G+TAL A A +D L+ GAD++ T L V AV +LL+ G +VN + G + LHL GS R +VD L N +G TP + ++ +T ++Y T+ V G +LARAP DRTWRRR V+ RA A++ R P
Sbjct: 122 KKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCST--VEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHARG---AQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTC---GSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILK--VTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAP 457
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: Uncharacterized (protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JL08_BIOGL) HSP 1 Score: 64.3 bits (155), Expect = 6.010e-7 Identity = 65/203 (32.02%), Postives = 99/203 (48.77%), Query Frame = 2
Query: 71 SAATGNRAAMINTLIGLGIDVHGSRDGPIPLESAIESHSPDALSALVAHGADVN-KANAVDLTPLQVAVPWAHIGRGILKALLAAGANPDVGGNGASVLLEALGSFDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDI-DFLVQKGADMD-LSTFEDERTALHVACSRMCARAVTSLLRHGADVNVDDGTGNTPLH 670
S A G+ ++I L+ G D+HG D PL +A++ D + L+ +GADVN K N L + + + + +L A +N ++L VLL GA +N +G TALI + D ++ I F + KG ++ + T + TALH A + RA+T LL+HGA+VNV D G +PLH
Sbjct: 426 SVAVGD-VSLIEALLASGADIHGITDQKTPLMNAVDI---DVIKYLLDNGADVNFKTNTTTL----IHTLTSSYRQSLESSLQVAESNTSSEQQHINIL-------------NVLLDNGALLNDINDDGQTALINSVTRDCSEKIIKFFLNKGCKINQVDTLGN--TALHEAANSGNIRALTVLLKHGANVNVQDTIGCSPLH 605
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: Ankyrin (repeat n=1 Tax=Abditibacterium utsteinense TaxID=1960156 RepID=A0A2S8SUK8_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 8.940e-7 Identity = 75/228 (32.89%), Postives = 111/228 (48.68%), Query Frame = 2
Query: 11 LVRHGADLKACSENGLTVMNSAATGNRAAMINTLIGLGIDVHGSRDGPIPLESAIESHSPDALSALVAHGADVNKANAVDLTPLQVAVP-WAHIGRGILKALLAAGANPD-VGGNGASVLLEAL---GSFDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDIDFLVQKGADMDLSTFEDERTALHVACSRMCARAVTSLLRHGADVNVDDGTGNTPLHLAA 679
L ++ A L A +E+ + S G+ AA+ + G + + G PL AI+S D ++ L+ GAD N + L AV W + I +ALLA GA D V G + LL L G + + LLA GA++ A +G +I+ A ++ D+ + + AD+ + E+ T L A SR A V LL GADVNV + +G+T LHLAA
Sbjct: 22 LAQNTATLAARAES---LSESIRKGDLAAVKTAIEGEPKLIESTSRGNNPLYVAIQSGKADVVNYLLEKGADPN-VETYSGSALAAAVSGWGDNWKTIAEALLAKGAKIDGVDEEGQTPLLRMLNYGGGSAQKDRVSWLLANGADLYARSRDGRN-VIQMAIVNSQPDVVTAILEKADVKKAD-ENGNTPLFAAASRGNAEYVRLLLGRGADVNVQNASGDTVLHLAA 243
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: ankyrin-1-like (n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C9C2A1) HSP 1 Score: 63.2 bits (152), Expect = 1.310e-6 Identity = 73/262 (27.86%), Postives = 108/262 (41.22%), Query Frame = 2
Query: 11 LVRHGADLKACSENGLTVMNSAATGNRAAMINTLI------GLGIDVHG-SRDGPIPLESAIESHSPDALSALVAHGADVNKANAVDLTPLQVAVPWAHIGRGILKALLAAGANPDV-------GGNGASVLLEALGSFDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDIDFLV-------QKGADMDLSTFEDERTALHVACSRMCARAVTSLLRHGADVNVDDGTGNTPLHLAAM---AGGSSPRQALSIVD 724
L+R GAD G T ++ MI L+ G+ + V + G PL +A+ + L+ +GA+ N ANA TPL + + ++ A V +G + L AL S R +A +LL+ GAN N G+TAL + + ++ +V K ++D T + RT LH A R +LRHGAD N+ DG G TPLH GG+ +VD
Sbjct: 283 LLRKGADPNMADNEGSTALHIICMRRDDGMIEMLLKICAELGVTLQVDARDKSGDTPLHAALSNGRVQTSELLLRNGANPNAANAKGSTPLHSICKHPEDSHILARRVIDVCAELRVTLRVNAQDASGDTALHVALSS-GCRNLARLLLSNGANPNLANDGGLTALHDICLKADDQELAEMVFELSHERYKPIEVDART-KCGRTPLHCAMMRGHGIVGQFVLRHGADPNLADGDGQTPLHYICQREDGGGNLAEMFFEVVD 542
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Match: Uncharacterized (protein n=4 Tax=Brachypodium distachyon TaxID=15368 RepID=I1I9S2_BRADI) HSP 1 Score: 61.6 bits (148), Expect = 2.030e-6 Identity = 72/216 (33.33%), Postives = 99/216 (45.83%), Query Frame = 2
Query: 44 SENGLTVMNSAATGNRAAMINTLI-GLGIDVHG-SRDGPIPLESAIESHSPDALSALVAHGADVNKANAVDLTPLQVAVPWAHIGR-GILKALLAAGANPDVGGNGASVLLEAL-GSFDFRKIATVLLAGGANINACGLNGVTALIEAAAMDEADDIDFLVQKGADMDLSTFEDERTALHVACSRMCARAVTSLLRHGADVNVDDGTGNTPLHLAA 679
S G+ V++ AA G M L+ L +DV G PL AI + D + L+ H AD K N LTPL VA A IG+ I++ LL+ GA+ D G + L A G D + +LL A+ N T L+ A + L++ GAD++ FE T L VA + L+ GAD NV D G TP+ +AA
Sbjct: 78 SSFGIGVLHFAALGRSLPMCRYLVEDLRMDVDDICPAGETPLTFAIGFENVDVVRYLLNHDADTEKLNEDGLTPLYVA---AAIGQCEIVEVLLSKGAHIDALSTGETALHAAAHGRHD--NVVKILLDHCADHNKINFGDCTPLVCAIDARSLKCVKLLLEAGADVNCVGFE---TPLIVAAGIGLTDILKCLVLAGADPNVHDSFGRTPVEIAA 285 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9320.17381.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9320.17381.1 >prot_E_fasciculatus_S2_contig9320.17381.1 ID=prot_E_fasciculatus_S2_contig9320.17381.1|Name=mRNA_E_fasciculatus_S2_contig9320.17381.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=366bp MNSAATGNRAAMINTLIGLGIDVHGSRDGPIPLESAIESHSPDALSALVAback to top mRNA from alignment at E_fasciculatus_S2_contig9320:882..3768+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9320.17381.1 ID=mRNA_E_fasciculatus_S2_contig9320.17381.1|Name=mRNA_E_fasciculatus_S2_contig9320.17381.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2887bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9320:882..3768+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9320:882..3768+ >mRNA_E_fasciculatus_S2_contig9320.17381.1 ID=mRNA_E_fasciculatus_S2_contig9320.17381.1|Name=mRNA_E_fasciculatus_S2_contig9320.17381.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1098bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9320:882..3768+ (Ectocarpus fasciculatus EfasUO2)back to top |