mRNA_E_fasciculatus_S2_contig9314.17376.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS1_ECTSI) HSP 1 Score: 367 bits (942), Expect = 3.110e-122 Identity = 185/195 (94.87%), Postives = 190/195 (97.44%), Query Frame = 3
Query: 252 MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGEMKKET-LPKPEAGEKIRDKDPTAAPALDSK 833
MRVVVQRVKRASVAVE+KDGDGTSSEPS+VVSEIGKGILCLVGVK+GDEKGHAEW+CKQIVTAKLFEGMSEANADKRWRSN+KQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPP EAREFY FVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGEMK ET LPKPEAGEKIRDKDPTAAPALDSK
Sbjct: 1 MRVVVQRVKRASVAVEHKDGDGTSSEPSSVVSEIGKGILCLVGVKDGDEKGHAEWLCKQIVTAKLFEGMSEANADKRWRSNVKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPAEAREFYSRFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGEMKNETPLPKPEAGEKIRDKDPTAAPALDSK 195
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD1_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.420e-50 Identity = 87/94 (92.55%), Postives = 91/94 (96.81%), Query Frame = 3
Query: 252 MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQ 533
MRVVVQRVKRASV VE+KD DGTS EPSTVVSEIGKGILCLVGVKEGDE+GHAEWICKQIVTAKLFEGMSEANADK+WRSN+KQNGFEILLVSQ
Sbjct: 1 MRVVVQRVKRASVVVEHKDADGTSLEPSTVVSEIGKGILCLVGVKEGDERGHAEWICKQIVTAKLFEGMSEANADKKWRSNVKQNGFEILLVSQ 94
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A6U2C6S1_9CHLO) HSP 1 Score: 152 bits (384), Expect = 9.390e-40 Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 3
Query: 243 RATMRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDS 740
R MR +V RV+ ASV VE K +VS IG G+LCLVG+K+ D + AE++CK+++ ++F +A A W ++ EIL VSQFTL GR+ + DF+ SMPP +AREFY +FVDMV+ + PE V DGVFGA M V+ VNDGPVT I+DS
Sbjct: 1 RGAMRAIVTRVRSASVEVEGK-----------IVSSIGPGLLCLVGIKDSDRRKDAEYVCKKLLKTRIFAKEDQARAS--WDEDVVTRKGEILCVSQFTLYGRLKKGTRPDFSKSMPPAQAREFYDSFVDMVRQEYEPERVHDGVFGAMMGVASVNDGPVTFIIDS 153
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZH98_PHYSP) HSP 1 Score: 149 bits (375), Expect = 1.070e-38 Identity = 79/167 (47.31%), Postives = 109/167 (65.27%), Query Frame = 3
Query: 252 MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGEMK 752
M+V++QRV ASV VE K VV EIGKG+LC VG+ D + AEW C++++ A L+ S D+ W++++K NG+E+L+VSQFTL+G+ K DF +M P A+EFY AF D V+ H PE V +GVFGA MEVS+VNDGPVT+ ++S + K
Sbjct: 1 MKVLMQRVTSASVRVEGK-----------VVGEIGKGLLCFVGIGHDDTEDDAEWCCRRLLNAHLWPDES----DRAWKTSLKSNGYEVLVVSQFTLHGQFAGN-KPDFHLAMGPGPAKEFYDAFCDRVRREHVPEKVAEGVFGAYMEVSIVNDGPVTMQINSKDRK 151
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZPR4_HAELA) HSP 1 Score: 147 bits (371), Expect = 2.290e-37 Identity = 82/164 (50.00%), Postives = 105/164 (64.02%), Query Frame = 3
Query: 249 TMRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDS 740
+MR V+QRVK ASV VE K +VS IG G+LCLVG+K D A +I K+I+ + F G E + W ++ G+E+LLVSQFTL GR+ K K DFT +M A+E + AFV V+ AH PELVKDGVFGA M+V+LVNDGPVT ++DS
Sbjct: 62 SMRAVIQRVKSASVEVEGK-----------IVSSIGPGLLCLVGLKTTDTAKDAAYITKKILKTRAFNG--EGEDGRSWDKDVISCGYEVLLVSQFTLYGRL-QKAKPDFTKAMSTAPAKEMWAAFVAQVQEAHKPELVKDGVFGAMMDVALVNDGPVTFLLDS 211
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TKM7_CHLSO) HSP 1 Score: 144 bits (364), Expect = 6.770e-37 Identity = 75/171 (43.86%), Postives = 112/171 (65.50%), Query Frame = 3
Query: 252 MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGEMKKETL 764
MR VVQRV ASV V DG+ +V +IG G+LCLVG+++ D A++I ++I+ +L+ + K W N++Q G+ +L VSQFTL GR+ GK D++ +MPP +ARE Y AF+D ++ ++ P+ ++DGVFGA M+VSLVNDGPVT ++DS + + L
Sbjct: 1 MRAVVQRVTSASVEV---DGE--------IVGKIGPGLLCLVGLRDTDTDKDADYIARKILGLRLWPS---PDGSKAWDQNVQQRGYGVLCVSQFTLFGRLKGAGKPDYSKAMPPQQAREAYAAFLDRLRQSYEPDRIQDGVFGAMMQVSLVNDGPVTFLLDSADPNNQAL 157
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QST5_DUNTE) HSP 1 Score: 144 bits (362), Expect = 7.780e-37 Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = 3
Query: 252 MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQ-NGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDS 740
MR VVQRVK ASV V + VS I G+LCL+G++ GD K A++ICK+I+ +++ K+W +++ +G EIL+VSQFTL GR K K DF+ +MPP EAREFY AFV+ V+ + E VKDGVFGA M+VSL NDGPVT ++DS
Sbjct: 1 MRAVVQRVKNASVQVNGEQ-----------VSSINAGLLCLIGLRAGDTKKDADFICKKILKTRVWPNKETG---KQWDTDVTDGDGREILMVSQFTLYGRT-KKSKPDFSHAMPPQEAREFYQAFVENVRQEYIAEKVKDGVFGAMMDVSLTNDGPVTFVIDS 149
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDE5_PYTIN) HSP 1 Score: 142 bits (358), Expect = 2.700e-36 Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 3
Query: 252 MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGEMK 752
MRVV+QRV ASV V DG+ VV +IGKG++CLVG+ D + AE+ C++++ A+L+ D W+S++ NG+E+LLVSQFTL G K DF +M P A+EFY AF D V++AH+ + V +GVFGA MEVSLVNDGPVT+ +DS + K
Sbjct: 1 MRVVLQRVTGASVRV---DGE--------VVGQIGKGLVCLVGITREDTEEDAEFCCRRLLNARLWPD----EKDTAWKSSVVSNGYEVLLVSQFTLYGYF-QGNKPDFHLAMAPAPAKEFYHAFCDRVRAAHSADKVAEGVFGAMMEVSLVNDGPVTMTIDSRDRK 151
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XKL3_9CHLO) HSP 1 Score: 142 bits (358), Expect = 2.870e-36 Identity = 76/163 (46.63%), Postives = 108/163 (66.26%), Query Frame = 3
Query: 252 MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDS 740
MR VVQRV+ A V V+ ++VS IG G+LCL+GVK+ D+ AE+ICK+I+ ++F ++ + W +++ + E+LLVSQFTL R+ K + DF+ +MPPT+A+E Y FV+MV+ + PE VKDGVFGA M V+L NDGPVT I+DS
Sbjct: 1 MRAVVQRVRSAHVEVDG-----------SIVSSIGPGLLCLIGVKDTDQGADAEYICKKILKTRVFP-QNDDSKRAAWDNDVVSHNGEVLLVSQFTLYARL-KKPRPDFSKAMPPTQAKELYSQFVEMVQRDYIPEKVKDGVFGAMMNVTLENDGPVTFILDS 150
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Match: D-aminoacyl-tRNA (deacylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4R2_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.250e-36 Identity = 78/165 (47.27%), Postives = 102/165 (61.82%), Query Frame = 3
Query: 252 MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKGHAEWICKQIVTAKLFEGMSEANADKRWRSNIKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPTEAREFYGAFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGE 746
M+VV+QRVK ASV+V + +S IGKG LCLVG+ E D A+W+ KQI++ KLF G K W+ NI Q E+L+VSQFTL G+V +GK+DF +M P ARE+Y F+D +K V DG FG MEVSL+NDGP+T+ +DS E
Sbjct: 1 MKVVIQRVKSASVSVNDSQ-----------ISCIGKGFLCLVGIHETDGPADADWMIKQIISCKLFPGED----GKPWKRNISQIEGELLMVSQFTLYGKVYKRGKMDFHHAMSPDAAREYYSRFLDSLKEKTITGKVYDGAFGEIMEVSLLNDGPITITLDSFE 150 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9314.17376.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9314.17376.1 >prot_E_fasciculatus_S2_contig9314.17376.1 ID=prot_E_fasciculatus_S2_contig9314.17376.1|Name=mRNA_E_fasciculatus_S2_contig9314.17376.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=195bp MRVVVQRVKRASVAVENKDGDGTSSEPSTVVSEIGKGILCLVGVKEGDEKback to top mRNA from alignment at E_fasciculatus_S2_contig9314:2316..5547- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9314.17376.1 ID=mRNA_E_fasciculatus_S2_contig9314.17376.1|Name=mRNA_E_fasciculatus_S2_contig9314.17376.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3232bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9314:2316..5547- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9314:2316..5547- >mRNA_E_fasciculatus_S2_contig9314.17376.1 ID=mRNA_E_fasciculatus_S2_contig9314.17376.1|Name=mRNA_E_fasciculatus_S2_contig9314.17376.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=585bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9314:2316..5547- (Ectocarpus fasciculatus EfasUO2)back to top |