mRNA_E_fasciculatus_S2_contig9313.17375.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: ARL2_Bind_BART (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI3_ECTSI) HSP 1 Score: 247 bits (631), Expect = 7.390e-82 Identity = 124/133 (93.23%), Postives = 126/133 (94.74%), Query Frame = 1
Query: 79 QQTTRTIPRKHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKEHARGSNGDSLSGSSSSHK 477
Q T RTI RKHHEPFLDTADEGQWTS G VEHKLEFTEVYNLFLRHFE+KISGFIEEEAGGTVEQFQQEC+EALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKEHAR NGDSLSGSSSSHK
Sbjct: 30 QHTNRTISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFENKISGFIEEEAGGTVEQFQQECEEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKEHARRGNGDSLSGSSSSHK 162
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: ARL2_Bind_BART (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV0_9PHAE) HSP 1 Score: 240 bits (612), Expect = 5.790e-79 Identity = 122/133 (91.73%), Postives = 123/133 (92.48%), Query Frame = 1
Query: 79 QQTTRTIPRKHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKEHARGSNGDSLSGSSSSHK 477
QQT RTI RKHHEPFL+TADEGQWTS VEHKLEFTEVYNLFL HFEDKISGFIEEEAGGTVEQFQQECKEAL TLEEFSPRRFFIEILLATTDYDRFY LMVGEAKKLRR K HARGSNGDSLSGSSSSHK
Sbjct: 30 QQTNRTIYRKHHEPFLNTADEGQWTSPAEVEHKLEFTEVYNLFLTHFEDKISGFIEEEAGGTVEQFQQECKEALLTLEEFSPRRFFIEILLATTDYDRFYVLMVGEAKKLRRAKAHARGSNGDSLSGSSSSHK 162
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: ARL2_Bind_BART (domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZQ0_AURAN) HSP 1 Score: 94.0 bits (232), Expect = 2.590e-19 Identity = 46/109 (42.20%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 94 TIPRKHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREK 420
T KH EPFLD +G+ +S G +H F + Y ++L HFE ++ I AG TV F +EAL+ +F P RFF+E LLATT+Y+ F LM+ EAK++R+++
Sbjct: 1170 TFAEKHIEPFLDALVKGESPTSDGGDHSHSFYDTYKVYLEHFERRVEQHIVA-AGATVGDFMAVAREALENASDFDPNRFFLEALLATTEYETFIVLMMNEAKRIRKQR 1277
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVE5_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.080e-17 Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 1
Query: 97 IPRKHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKK 405
+ R+H + F T S EH+LE+ +VY +L FE KI FIE G +V++FQ C++ L+ EFSP+RFF+E LLATT+Y F LM GEA+K
Sbjct: 12 VSRRHVDLFASAL-----TMSADDEHRLEYYDVYREYLDEFEKKIHTFIER-TGHSVDEFQTACQKVLEEEGEFSPKRFFVEALLATTEYPIFLSLMKGEARK 108
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP95_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.200e-16 Identity = 41/72 (56.94%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 175 KLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEALQTLEEFSPRRFFIEILLATTDYDRFYFLMV 390
+LEFTE Y FL HFE KI IE GG +FQ++C+ AL L + S RRFFIE LLATT+Y RF+ LMV
Sbjct: 1 RLEFTETYRKFLDHFEAKIQSHIEA-VGGDDAEFQRQCRRALMDLPQGSERRFFIEALLATTEYQRFFVLMV 71
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: Cilia- (and flagella-associated protein 36 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLI6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.430e-15 Identity = 42/109 (38.53%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 103 RKHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEAL--QTLEEFSPRRF--FIEILLATTDYDRFYFLMVGEAKKLRRE 417
R+H E FLD D G VEHK E+ E+++ +LR FE+++S F+E E G T+++F +EC+ + + F ++ F+E LLA+ +Y+ F+ LM+ EA++LRR+
Sbjct: 28 REHAETFLDALD----AKGGDVEHKHEYKEIHDKYLRLFEEELSDFVESE-GSTIDEFFRECRAVVNAKVTGYFDEHKYVWFVEHLLASMEYELFFSLMINEARRLRRK 131
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: Cilia- (and flagella-associated protein 36 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8Y9_GLOUD) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-15 Identity = 41/112 (36.61%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 103 RKHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEALQ-----TLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKE 423
R++ E F+D + G VEHK E+ E+++ +LR FE+++S FIE E G T+E+F +EC++ ++ + ++F+E L+A+ DY++FY LMV EA++L R ++
Sbjct: 27 RENAEVFMDAVE----AKGGDVEHKHEYKELHDRYLRLFEEELSDFIESE-GATIEEFFRECRDIMEGNYTALFSDEHQYKWFVEHLVASMDYNQFYALMVNEARRLNRSRK 133
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: Cilia- (and flagella-associated protein 36 n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C536_SAPPC) HSP 1 Score: 74.3 bits (181), Expect = 3.710e-14 Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 1
Query: 106 KHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKK-LRREK 420
+H F D+ D S VEHK E+ E+++ +L+ FED++ GF+E+E GGT QF CK+ L ++ +F+ LLA+ +Y FY LM EA++ LRR K
Sbjct: 26 EHASAFFDSVD------SDDVEHKHEYKELHDAYLKIFEDRLQGFLEDE-GGTTAQFYAACKDILDEKDDHGEYAWFVNRLLASMEYKLFYGLMRNEARQQLRRRK 124
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: Cilia- (and flagella-associated protein 36 n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RM49_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 6.050e-14 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 103 RKHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEA----LQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRRE 417
R+H + F+D + G VEHK E+ E+++ +L+ FE+++S F+E E G T+E+F +EC+E L E +F+E LLA DY FY LMV EA+ + R+
Sbjct: 27 REHADAFIDATE----AKGGDVEHKHEYKELHDQYLKLFEEELSEFVESE-GSTIEEFFKECREIHDGEYTALFEEHTYAWFVEHLLACMDYKHFYGLMVNEARHMSRK 130
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Match: Cilia- (and flagella-associated protein 36 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS38_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 7.400e-14 Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 106 KHHEPFLDTADEGQWTSSGGVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVEQFQQECKEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKE 423
+H F D A S VEHK E+ E++N +L+ FED++SGF+E+E GGTV F CK+ ++ + + ++F++ L A+ +Y FY LMV EA++ R ++
Sbjct: 145 EHAPAFFDAA------RSDDVEHKHEYKELHNAYLKLFEDRLSGFLEDE-GGTVSDFYDACKDVMEQKGDLAEYKWFLDRLHASMEYKLFYGLMVNEARQQLRSRK 243 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9313.17375.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9313.17375.1 >prot_E_fasciculatus_S2_contig9313.17375.1 ID=prot_E_fasciculatus_S2_contig9313.17375.1|Name=mRNA_E_fasciculatus_S2_contig9313.17375.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=160bp TTAHRFRVFIALISGWIIQTMSRLLCQQTTRTIPRKHHEPFLDTADEGQWback to top mRNA from alignment at E_fasciculatus_S2_contig9313:2651..4462- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9313.17375.1 ID=mRNA_E_fasciculatus_S2_contig9313.17375.1|Name=mRNA_E_fasciculatus_S2_contig9313.17375.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1812bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9313:2651..4462- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9313:2651..4462- >mRNA_E_fasciculatus_S2_contig9313.17375.1 ID=mRNA_E_fasciculatus_S2_contig9313.17375.1|Name=mRNA_E_fasciculatus_S2_contig9313.17375.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=480bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9313:2651..4462- (Ectocarpus fasciculatus EfasUO2)back to top |