mRNA_E_fasciculatus_S2_contig9305.17364.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9305.17364.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT7_ECTSI) HSP 1 Score: 615 bits (1587), Expect = 8.200e-217 Identity = 292/347 (84.15%), Postives = 315/347 (90.78%), Query Frame = 2
Query: 8 KLEVPTVVAGKNDAASASNDDGGHQPDLPEESSIQPIDIPFLQEPGGWQLPGNGISLDATGEPKSGTTWLGRLVPDLALHLCGNANNTWCEMGGLEVINNLPAPKYVFEMVHKTAKGAALYLRFDGNGKHYIPGMKGEPHPGCENGGSPHPNFFGDAPPCLDEEETPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVIVRDPRDVAMSEREMRMKYYPEPVWIKKATADVFARRRFEALVSWTHQRYLWHTETVMAPSSHVVFYEDLKENHHAFIGMAAFMGLACSEEDALEVWRAHRNAAPHGDYSTRGLHSDTIQWMNETMARLLPPSLALRWGVTPTDDLGA 1048
+L+VP VAG++ SASND G HQP+LPE SSIQ ID P LQEPGGWQLPGNGIS+DATGEPKSGTTWLGRLVPDLALHLCGNANN+WC MGGL V++N+PAPKYVFEMV+KTA AL+L FDGNGKHYIPGMKGEPHPGC+NGG PH N+FGD PPCLDEE+TPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVI+RDPRDVAMSEREMRMKYY +P WI+KAT DVFAR+RFE LVSWTHQRYLWHTETVMAPSSHVVFYEDLK++HH FIGMA FMGL CSEEDALEVWRAHRN APHGDYST GL +T+QWMNETMARLLPPSLALRWGVTPTD LGA
Sbjct: 43 QLQVP-AVAGESKTRSASND-GDHQPELPEMSSIQLIDTPLLQEPGGWQLPGNGISMDATGEPKSGTTWLGRLVPDLALHLCGNANNSWCGMGGLVVLDNIPAPKYVFEMVNKTAGEGALFLHFDGNGKHYIPGMKGEPHPGCDNGGRPHENYFGDTPPCLDEEDTPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVIIRDPRDVAMSEREMRMKYYRDPAWIRKATPDVFARKRFEILVSWTHQRYLWHTETVMAPSSHVVFYEDLKDHHHGFIGMADFMGLTCSEEDALEVWRAHRNPAPHGDYSTHGLKQETVQWMNETMARLLPPSLALRWGVTPTD-LGA 386
BLAST of mRNA_E_fasciculatus_S2_contig9305.17364.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E2_9PHAE) HSP 1 Score: 614 bits (1584), Expect = 2.610e-215 Identity = 287/326 (88.04%), Postives = 303/326 (92.94%), Query Frame = 2
Query: 71 GGHQPDLPEESSIQPIDIPFLQEPGGWQLPGNGISLDATGEPKSGTTWLGRLVPDLALHLCGNANNTWCEMGGLEVINNLPAPKYVFEMVHKTAKGAALYLRFDGNGKHYIPGMKGEPHPGCENGGSPHPNFFGDAPPCLDEEETPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVIVRDPRDVAMSEREMRMKYYPEPVWIKKATADVFARRRFEALVSWTHQRYLWHTETVMAPSSHVVFYEDLKENHHAFIGMAAFMGLACSEEDALEVWRAHRNAAPHGDYSTRGLHSDTIQWMNETMARLLPPSLALRWGVTPTDDLGA 1048
GGHQPDLPE+SSIQPIDIPFLQEPGGWQLPGNGIS+DATGEPKSGTTWLGRLVPDLALHLCGNANN+WC MGGL V++NLPAPKYVFEMV+KTA AL+L FDGNGKHYIPGMKGEPHPGC+NGG PH N+FGD PPCLDEEETPTRERLRACLFNTSALCVQYM SVDPDVRRSMVI+RDPRDVAMSEREMR+KYY EP WI+K T DVFAR+RFE LVSWTHQRYLWHTETVMAPSSHVVFYEDLK++HH FIGMA FMGLACSEEDALEVWRAHRN APHGDYST GL +TIQWMNETMARLLPPSLA RWGVTPTD LGA
Sbjct: 128 GGHQPDLPEKSSIQPIDIPFLQEPGGWQLPGNGISMDATGEPKSGTTWLGRLVPDLALHLCGNANNSWCGMGGLAVLDNLPAPKYVFEMVNKTAGEGALFLHFDGNGKHYIPGMKGEPHPGCDNGGRPHENYFGDTPPCLDEEETPTRERLRACLFNTSALCVQYMASVDPDVRRSMVIIRDPRDVAMSEREMRIKYYREPAWIRKTTPDVFARKRFEILVSWTHQRYLWHTETVMAPSSHVVFYEDLKDHHHGFIGMADFMGLACSEEDALEVWRAHRNPAPHGDYSTHGLQLETIQWMNETMARLLPPSLAFRWGVTPTD-LGA 452
BLAST of mRNA_E_fasciculatus_S2_contig9305.17364.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L183_9PHAE) HSP 1 Score: 337 bits (864), Expect = 2.530e-107 Identity = 169/319 (52.98%), Postives = 225/319 (70.53%), Query Frame = 2
Query: 89 LPEES-SIQPIDIPFLQEPGGWQLPGNGISLDATGEPKSGTTWLGRLVPDLALHLCGNANNTWCEMGGLEVINNLPAPKYVFEMVH-KTAKGAA-LYLRFDGNGKHYIPGMKGEPHPGCENGGSPHPNFFGDAPPCLDEEETPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVIVRDPRDVAMSEREMRMKYYPEPVWIKKATADVFARRRFEALVSWTHQRYLWHTETVMAPSSHVVFYEDLKENHHAFIGMAAFMGLACSEEDALEVWRAHRNAAPHGDYSTRGLHSDTIQWMNETMARLLPPSLALRWGVTPTD 1036
+PEE+ SI+P+ IPF Q+P + G+G+SL A GEPKSGTTWLGR+VP LA+ LCG+ NN WC++GG+EV + PAP Y FE+++ T G L+L F G KH IPGM C NGG H F D PC D E+PTRERL +CL+NT+ CV YM S DP VRRS+V+ RDPRDV +SE +MR + + WI + + F + +FE LVSW HQRY+WHT +M PSSHV FY++L+++ F+G+A MGL CSE+ A +VW+AH+ A+P+G ++TR L TIQ+MN TMARLLPPS+A++WG+TPT+
Sbjct: 83 VPEEADSIKPVAIPFKQKPDEFGERGHGLSLVALGEPKSGTTWLGRMVPSLAIELCGSENNPWCQLGGVEVFPHPPAPSYEFELLNISTPTGRPRLFLHFQGRIKHIIPGMDLGIPLKCRNGGRLHKEGFMDLQPC-DSGESPTRERLESCLWNTTKRCVNYMTSTDPAVRRSIVLFRDPRDVVISEYKMRTQVFHRDPWIASLSLEEFVQFKFEVLVSWLHQRYMWHTGDLMGPSSHVEFYDELQKSPVGFVGIARLMGLECSEDQAYKVWKAHKQASPNGGFATR-LGEATIQFMNATMARLLPPSVAIQWGLTPTE 399
BLAST of mRNA_E_fasciculatus_S2_contig9305.17364.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR3_9PHAE) HSP 1 Score: 298 bits (763), Expect = 1.180e-93 Identity = 145/282 (51.42%), Postives = 193/282 (68.44%), Query Frame = 2
Query: 200 SGTTWLGRLVPDLALHLCGNANNTWCEMGGLEVINNLPAPKYVFEMVHKTAKGAA---LYLRFDGNGKHYIPGMKGEPHPGCENGGSPHPNFFGDAPPCLDEEETPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVIVRDPRDVAMSEREMRMKYYPEPVWIKKATADVFARRRFEALVSWTHQRYLWHTETVMAPSSHVVFYEDLKENHHAFIGMAAFMGLACSEEDALEVWRAHRNAAPHGDYSTRGLHSDTIQWMNETMARLLPPSLALRWGVTPTD 1036
SGTTWLGR+VP LAL LCG+ NN WC++GG+ +I + PA + FE++ + G+ L+L F G KH IPGM C NGG H ++F D PC +E PTR+RL +CL++TSA CV++MPS DP VRRS+VI+RDPR+V +SE MR + W + + D F +FE LVSW HQRY+WHT T+M PSSH+ YE+L+ +H I +A FMGL CSE+ A +VW R+ +P G Y++RGL +T+ +MN TMARLLPP+LALRW VTPT+
Sbjct: 17 SGTTWLGRVVPALALELCGSFNNQWCQVGGMTIIPHPPASLHEFELLKRNIGGSGSPELFLHFKGIHKHIIPGMDLGVPVSCRNGGRLHRDYFLDLQPCASDE-MPTRDRLVSCLYDTSASCVRHMPSADPAVRRSIVIMRDPRNVVISEYMMRTQVIERERWTRTFSLDEFIMWKFEVLVSWIHQRYMWHTGTLMGPSSHITVYEELQRSHLGLIDIAGFMGLQCSEQQAAKVWIGRRHPSPSGGYASRGLSVETVSFMNATMARLLPPALALRWDVTPTE 297
BLAST of mRNA_E_fasciculatus_S2_contig9305.17364.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLX3_9PHAE) HSP 1 Score: 276 bits (706), Expect = 3.900e-85 Identity = 142/303 (46.86%), Postives = 188/303 (62.05%), Query Frame = 2
Query: 227 VPDLALHLCGNANNTWCEMGGLEVINNLPAPKYVFEMVHK---TAKGAALYLRFDGNGKHYIPGMKGEPHP-GCENGGSPHPNFFGDAPPCLDEEETPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVIVRDPRDVAMSEREMRMKYYPEPVWIKKATADVFARRRFEALVSWTHQRYLWHTETVMAPSSHVVFYEDL-----------------------------KENHHAFIGMAAFMGLACSEEDALEVWRAHRNAAPHGDYSTRGLHSDTIQWMNETMARLLPPSLALRWGVTPTD 1036
+P LAL LCG++ NTWCEMGGL V + P+P Y FE++ + G L+L + G+ KH IPGM + HP GC GG H NFF D PPC+ + TRE+L CL+NTS+ C+ ++PS + RR+ V++RDPRDV +SE MR YY + + + D F RF+ +VSWTHQR++WHTETV++ SSHV+FY+DL K N I +AAFMGL CSE+ A VW +H+NA PHGDY+T GL TI+WMN TMA LLP +++L WG+TPTD
Sbjct: 1 MPQLALELCGSSTNTWCEMGGLAVYPSEPSPWYEFELLKRGTGEGSGPTLFLHYKGSNKHVIPGMSWKGHPEGCNQGGRRHRNFFEDYPPCISGPAS-TREQLTGCLWNTSSRCMGFVPS---ESRRTAVMLRDPRDVVLSEFRMRRDYYHQEE-VMAISVDDFIWDRFQTIVSWTHQRWVWHTETVLSESSHVMFYDDLQIFSACCCISNLSAPVRGARRLFYTQSSLKANPMGMIDLAAFMGLECSEDQARNVWESHQNAIPHGDYTTHGLQLGTIEWMNATMASLLPTAVSLHWGLTPTD 298
BLAST of mRNA_E_fasciculatus_S2_contig9305.17364.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW1_ECTSI) HSP 1 Score: 166 bits (419), Expect = 6.720e-45 Identity = 83/159 (52.20%), Postives = 108/159 (67.92%), Query Frame = 2
Query: 131 LQEPGGWQLPGNGISLDATGEPKSGTTWLGRLVPDLALHLCGNANNTWCEMGGLEVINNLPAPKYVFEMVHKTAKGAA---LYLRFDGNGKHYIPGMKGEPHPGCENGGSPHPNFFGDAPPCLDEEETPTRERLRACLFNTSALCVQYMPSVDPDVRRS 598
+Q+P G+ PG GISLDA GEPKSGTTWLGR+VP LAL LCG+ NN WC++GG+ +I + PA + FE++ + G+ L+L F G KH IPGM C NGG H ++F D PC +E PTR+RL +CL++TS CV++MPS DP VRRS
Sbjct: 1 MQDPDGFGKPGQGISLDALGEPKSGTTWLGRVVPALALELCGSFNNQWCQVGGMTIIPHPPASLHEFELLKRNIDGSGSPELFLHFKGIHKHVIPGMDLGVPVSCRNGGRLHRDYFLDLQPCASDE-MPTRDRLVSCLYDTSPSCVRHMPSADPAVRRS 158 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9305.17364.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9305.17364.1 >prot_E_fasciculatus_S2_contig9305.17364.1 ID=prot_E_fasciculatus_S2_contig9305.17364.1|Name=mRNA_E_fasciculatus_S2_contig9305.17364.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=257bp MGGLEVINNLPAPKYVFEMVHKTAKGAALYLRFDGNGKHYIPGMKGEPHPback to top mRNA from alignment at E_fasciculatus_S2_contig9305:60..4902- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9305.17364.1 ID=mRNA_E_fasciculatus_S2_contig9305.17364.1|Name=mRNA_E_fasciculatus_S2_contig9305.17364.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4843bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9305:60..4902- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9305:60..4902- >mRNA_E_fasciculatus_S2_contig9305.17364.1 ID=mRNA_E_fasciculatus_S2_contig9305.17364.1|Name=mRNA_E_fasciculatus_S2_contig9305.17364.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=771bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9305:60..4902- (Ectocarpus fasciculatus EfasUO2)back to top |