mRNA_E_fasciculatus_S2_contig928.17332.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRY1_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 1.770e-148 Identity = 219/224 (97.77%), Postives = 219/224 (97.77%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPPPDVEVPTKKSKQST 672
VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILR GGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPP DVEVPTKK KQST
Sbjct: 16 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILR---GGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPPSDVEVPTKKPKQST 236
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Uracil (phosphoribosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL27_9STRA) HSP 1 Score: 259 bits (662), Expect = 4.850e-84 Identity = 131/223 (58.74%), Postives = 172/223 (77.13%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPPPDVEVPTKKSKQS 669
VL HKL+LIRR+ +++FR+LFREI+FYLGYEAT L T + T + C + IA+ VAV+PILR GGLGMT+A+LELLP++PVYH+GMYRNPGS++P+QYYNRLPKG DVA++LDPIIAS++TI A VSI+KKWGA +KVVTL+ SR+GL L +HP+V VH A++D LA NG DL+PGIGDAGDRLYLG + ++ +++ P K ++S
Sbjct: 32 VLMHKLSLIRRKSTNSREFRSLFREISFYLGYEATQDLHTKVAHIHTHTAEFCEVRKIADKVAVIPILR---GGLGMTDAMLELLPNAPVYHIGMYRNPGSSMPIQYYNRLPKGQSCDVAILLDPIIASAKTICATVSIIKKWGAARVKVVTLIVSRTGLAQLLAVHPDVIVHCAAVDTLADNGHDLVPGIGDAGDRLYLGPDHVDDD---ELQSPGNKRQRS 248
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH49_PYTOL) HSP 1 Score: 182 bits (461), Expect = 5.910e-54 Identity = 101/199 (50.75%), Postives = 136/199 (68.34%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLY 597
VL HKL +R + + FR L RE+TFYLGYEAT L TT +KT + A+ + +VAVVPILR GLGM E +L+LLP++ V+H+GMYRN S +PVQYYN+LPK DVA++L+P+IA++ TI A V+I+K WG IKV++ VAS+ GL+ L HPEV+V +A+IDE + PG+GDAGDR +
Sbjct: 27 VLLHKLTKLRDERTDSTVFRHLLREVTFYLGYEATYDLQTTPKAIKTPVGEHSGAE-LTTSVAVVPILR---AGLGMVEPMLDLLPNAAVHHIGMYRNKHSLLPVQYYNKLPKQCDLDVAIVLEPVIATAGTIVATVAILKTWGVTKIKVISAVASKPGLQDLLSKHPEVEVIVAAIDEALTEEGYIFPGLGDAGDRQF 221
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Uracil (phosphoribosyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGI5_9STRA) HSP 1 Score: 182 bits (461), Expect = 6.460e-54 Identity = 100/221 (45.25%), Postives = 149/221 (67.42%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLETAPPPDVEVPTKKSK 663
VL+HKL +R + ++ FR L RE+TFYLGY+AT L T +KT + D A+ ++ +V +VPILR GLGM E +L++LPD+ V+H+GMYRN S +PVQYYN+LPK DVA+IL+P+IA++ TI A ++++K WG + IK+V+ +AS+ GL+ + +P+V++ LA+IDE ++PG+GDAGDR + +E VE+ TKK K
Sbjct: 27 VLRHKLTKLRDERTDSRIFRHLLREVTFYLGYDATDDLETIPKKIKTPKGDHEGAQ-LSTSVVLVPILR---AGLGMVEPMLDVLPDATVHHIGMYRNKQSLVPVQYYNKLPKECNVDVAIILEPVIATAGTIIATLAVLKTWGVEKIKIVSTIASKQGLQEVCAKNPDVEIFLAAIDEGLSEDGYILPGLGDAGDREFQTGTQVEK-----VEILTKKQK 238
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAC1_THAPS) HSP 1 Score: 183 bits (464), Expect = 6.570e-54 Identity = 103/211 (48.82%), Postives = 141/211 (66.82%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTD-----QCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
VL HKL+++R + FR+ REITF+LGYEAT+TLTT + + TD + +A+ VA++PILR GLGM +++LEL+ + V+H+GMYR+ S +PVQYYNRLPK DVA +LDP+IA+S TI +V I+KKWG I VV+++AS+ GL L K HP+V V L IDE D++PG+GDAGDRL+ GT +E
Sbjct: 49 VLAHKLSILRSSSTSPSSFRSTLREITFHLGYEATSTLTTRDVPLTVPGTDHKTHIEATGTKLAQKVALIPILRS---GLGMVDSMLELISSAEVHHIGMYRSK-SLMPVQYYNRLPKKCDVDVAYVLDPLIATSATIISVAGILKKWGVSEIHVVSVIASKQGLSELMKFHPDVHVTLGHIDEELNADGDVMPGLGDAGDRLF-GTPLIE 254
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Uracil (phosphoribosyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K1K3_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.730e-53 Identity = 96/206 (46.60%), Postives = 143/206 (69.42%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
VL+HKL +R + ++ FR L RE+TFYLGY+AT L+T +KT D A+ ++ +VA+VPILR GLGM E +L+LLP + V+H+GMYRN S +PVQYYN+LPK +VA+IL+P+IA++ TI A ++++K WG + IK+VT +AS+ GL+ + HP+V+++LA+ID+ ++PG+GDAGDR + LE
Sbjct: 27 VLRHKLTKLRDERTDSRVFRNLLREVTFYLGYDATDDLSTVPKKIKTPVGDHQGAE-LSTSVALVPILR---AGLGMVEPMLDLLPKATVHHIGMYRNKQSLLPVQYYNKLPKECNVEVAIILEPVIATAGTILATLAVLKTWGVEKIKIVTAIASKPGLKEVCASHPDVEIYLAAIDDELTEEGYILPGLGDAGDREFFTGKELE 228
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8E3_9STRA) HSP 1 Score: 180 bits (457), Expect = 4.040e-53 Identity = 100/207 (48.31%), Postives = 140/207 (67.63%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASI-DELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
VLQHKLAL+R + ++FR L REIT+Y+GYEAT LT I V++ +++ +A+VP++R GLGM + +LELLP++ V+H+GMYR GS+IPVQYYNRLP+ +DV+ +LDP+IAS RT+ A V +KKWG I VV+ VA+ GL+ L P+ VH+A+ D L P G+ +IPG+GDAGDR + G + E
Sbjct: 14 VLQHKLALMRNVDQPPREFRRLLREITYYVGYEATTNLTVEQIDVQSPL-GAGKGGHLSDKIAIVPVMR---AGLGMVDGMLELLPNAAVHHIGMYRMQGSDIPVQYYNRLPRDAVADVSFVLDPLIASGRTLCATVGTLKKWGCPKIVVVSCVATEQGLKNLFDEFPDTIVHVAATGDTLTPEGK-VIPGLGDAGDRQFNGPDEEE 215
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Uracil (phosphoribosyltransferase n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UPY9_9STRA) HSP 1 Score: 179 bits (454), Expect = 8.040e-53 Identity = 98/199 (49.25%), Postives = 137/199 (68.84%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLY 597
VL HKL +R + A FR L REITFYLGYEAT+ L+T +KT ++ +A TVA+VPILR GLGM EA+L+LLP++ V+H+GMYRN S +PVQYYN+LPK D A++L+P+I ++ TI A V+I+K WG IK+++ +AS+ GL+ L HPEV+V +A+ID+ ++PG+GDAGDR +
Sbjct: 27 VLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATSDLSTVPKQIKTPLGPHQGSE-LATTVALVPILR---AGLGMVEAMLDLLPNARVHHIGMYRNSNSLLPVQYYNKLPKECHIDCAIVLEPVINTAGTIIATVAILKVWGVSQIKIISTIASKDGLKDLYSKHPEVEVIVAAIDDTLSESGVIVPGLGDAGDRQF 221
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MFT6_9STRA) HSP 1 Score: 179 bits (454), Expect = 8.530e-53 Identity = 96/209 (45.93%), Postives = 144/209 (68.90%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTD---QCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLYLGTNSLE 618
VL K++++R T FR++ R+ITF+LGYEATATLTT I + +C K + E VA++PILR GLGMT+ +LEL+P + V+H+GMYR + +PVQYYNRLP+ SD+A ++DP+IA+++T+ +VV+++KKWG I V++++AS+ GLE K HP+V V + +D+ + +IPG+GDAGDRL+ GT L+
Sbjct: 26 VLHDKISILRSSSTTPASFRSVLRDITFHLGYEATATLTTRPIALTVPVGHDHIECKGKKLNERVALIPILRS---GLGMTDPMLELIPKAEVHHIGMYRQ--NLMPVQYYNRLPRKCESDIAFVVDPLIATAQTLVSVVAMLKKWGVPKIHVISVIASKPGLEEFLKSHPDVLVTVGHVDDELRDDGTIIPGLGDAGDRLF-GTPMLD 228
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WS49_9STRA) HSP 1 Score: 178 bits (452), Expect = 4.570e-52 Identity = 96/207 (46.38%), Postives = 139/207 (67.15%), Query Frame = 1
Query: 1 VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKT--------DRTDQCPAKTIAETVAVVPILRQASGGLGMTEALLELLPDSPVYHVGMYRNPGSNIPVQYYNRLPKGHPSDVALILDPIIASSRTINAVVSIVKKWGAKTIKVVTLVASRSGLEALNKMHPEVQVHLASIDELAPNGQDLIPGIGDAGDRLY 597
VL HK++++R + FR++ REIT++LGYEATA LTT I V D D C + E VAVVPILR GLGM++++LELLP + VYH+GMYR PGS PVQY+NRLP+ SD A++LDP+IAS++T A ++++KKWG I +V+++ S GL + + HP+VQ+ + ++D + ++PG+GDAGDRL+
Sbjct: 55 VLLHKISILRSANTPSGQFRSVLREITYHLGYEATAGLTTRPIPVSVSAGKESPNDHLD-CTGDKLIERVAVVPILRS---GLGMSDSMLELLPKASVYHIGMYRIPGS-APVQYFNRLPRKCASDAAIVLDPVIASAQTSLAAIAMLKKWGVPKIHLVSVLGSSEGLATIEEQHPDVQITVGTVDSILTKDGIVLPGLGDAGDRLF 256 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig928.17332.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig928.17332.1 >prot_E_fasciculatus_S2_contig928.17332.1 ID=prot_E_fasciculatus_S2_contig928.17332.1|Name=mRNA_E_fasciculatus_S2_contig928.17332.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=225bp VLQHKLALIRRQEGTAKDFRTLFREITFYLGYEATATLTTTSICVKTDRTback to top mRNA from alignment at E_fasciculatus_S2_contig928:7809..9632+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig928.17332.1 ID=mRNA_E_fasciculatus_S2_contig928.17332.1|Name=mRNA_E_fasciculatus_S2_contig928.17332.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1824bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig928:7809..9632+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig928:7809..9632+ >mRNA_E_fasciculatus_S2_contig928.17332.1 ID=mRNA_E_fasciculatus_S2_contig928.17332.1|Name=mRNA_E_fasciculatus_S2_contig928.17332.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=675bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig928:7809..9632+ (Ectocarpus fasciculatus EfasUO2)back to top |