mRNA_E_fasciculatus_S2_contig9262.17319.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Flavin_Reduct (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F6_9PHAE) HSP 1 Score: 421 bits (1082), Expect = 1.070e-144 Identity = 203/213 (95.31%), Postives = 208/213 (97.65%), Query Frame = 3
Query: 3 GHARIDPRDLKSCYSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRPRVGK 641
GH RIDPRDLKSCYSLMISSVVPRPIALTST APDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVV+IMSDWFVEAANHTCGSFPPEVDEM VAGLTPI+STIVAPPRIKESAVNMECKVRHTYDIVNSKGD+TTTVVFGEVVMFHVF+HLLKENGAGEGKPTVNHEG MP+SRLGGNTYGRLGSVFDI RPRVGK
Sbjct: 71 GHVRIDPRDLKSCYSLMISSVVPRPIALTSTLAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVSIMSDWFVEAANHTCGSFPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDVTTTVVFGEVVMFHVFTHLLKENGAGEGKPTVNHEGLMPMSRLGGNTYGRLGSVFDISRPRVGK 283
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Flavin_Reduct (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R2_ECTSI) HSP 1 Score: 386 bits (992), Expect = 1.120e-131 Identity = 189/206 (91.75%), Postives = 195/206 (94.66%), Query Frame = 3
Query: 39 CYSLMISS-----VVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRPRVGK 641
C SL++ + VVPRPIALTST APDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVV+IMSDWFVEAANHTCGS PPEVDEM VAGLTPI+STIVAPPRIKESAVNMECKVRHTYDIVNSKGD+TTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEG MPISRLGGNTYGRLGSVFDIPRPRVGK
Sbjct: 36 CPSLLVHTPVAHQVVPRPIALTSTLAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVSIMSDWFVEAANHTCGSLPPEVDEMDVAGLTPIKSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDVTTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGLMPISRLGGNTYGRLGSVFDIPRPRVGK 241
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Flavin_Reduct (domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IE62_GUITC) HSP 1 Score: 265 bits (678), Expect = 7.940e-84 Identity = 122/207 (58.94%), Postives = 157/207 (75.85%), Query Frame = 3
Query: 6 HARIDPRDLKSCYSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPR 626
H + P +LKSCY L+IS+ VPRPIAL S+++ G VN AP+SY + HDPP + VS CR KDTL N+L + EFVVNIMS+W+ E+ANHTCG+FPPEV+EM VAGLTP+ S I++PPR+ ESA+N EC++ H YD+ N++G +TTTVV GE+V FHV +L+ NGAGEGKPTVN + P+SRLGG TYGR +VFD+PR
Sbjct: 52 HVTLLPSELKSCYPLIISAYVPRPIALVSSKSAAGHVNVAPYSYTGAISHDPPAIVVSCCRKAGDVMKDTLANILDTKEFVVNIMSEWYAESANHTCGNFPPEVNEMDVAGLTPLPSKIISPPRVAESALNFECRLIHQYDMKNAQGKVTTTVVIGEIVAFHVHEGVLEMNGAGEGKPTVNFDALKPLSRLGGCTYGRTTAVFDLPR 258
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L4A2_9EUKA) HSP 1 Score: 244 bits (624), Expect = 1.100e-75 Identity = 122/211 (57.82%), Postives = 148/211 (70.14%), Query Frame = 3
Query: 3 GHARIDPRDLKSCYSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGS--KKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRP 629
G + P DLKSCY LMIS+ VPRPIA ST + G N APFSY V HDPPT+AVS+CRNG + KKDTL N+ +GEFVV IMS+WFVEAANHTCGSF VDE +GLT + S+IV PPR+ ESAV+ ECK+ ++I+N G T TVVFGEVV + ENGAGEGKPT+ + + ++RLGGNTYGR+ S FD+ RP
Sbjct: 46 GFVELIPSDLKSCYPLMISAYVPRPIAFVSTVSASGKGNLAPFSYSGCVAHDPPTIAVSICRNGRAADGKKDTLANIDDTGEFVVCIMSEWFVEAANHTCGSFERGVDEFDESGLTRLPSSIVKPPRVGESAVHFECKLSQRHEIINKAGVTTATVVFGEVVKVWAAKGVCDENGAGEGKPTIKFDNYRALARLGGNTYGRVTSTFDLDRP 256
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C094_CHRCT) HSP 1 Score: 244 bits (623), Expect = 2.360e-75 Identity = 119/206 (57.77%), Postives = 150/206 (72.82%), Query Frame = 3
Query: 15 IDPRDLKSCYSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGS-KKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRP 629
+DP++LKSCY L+ISS VPRPIA ST + G N APFSY V HDPPT+ V +CR N KKDTL N+ A+GEFVV IMS+WFVEAANH C +F VDE +GLT + ST V PPR+ ESA++ EC +RH +++VN+ G +T+T+V GEVVM H S + +GAGEGKPT++ F PISRLGG+TYGR S+FD+PRP
Sbjct: 64 LDPKELKSCYPLVISSYVPRPIAFVSTLSASGEGNLAPFSYSGVVAHDPPTIVVGICRGRNADGKKDTLANIDATGEFVVCIMSEWFVEAANHCCSAFERGVDEFDQSGLTRVPSTRVKPPRVGESAMHYECVLRHRHEVVNASGVVTSTMVVGEVVMMHAASAVCNVDGAGEGKPTIDFAKFQPISRLGGDTYGRTLSMFDLPRP 269
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Predicted (protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N2T0_MICPC) HSP 1 Score: 241 bits (615), Expect = 4.860e-75 Identity = 114/204 (55.88%), Postives = 146/204 (71.57%), Query Frame = 3
Query: 18 DPRDLKSCYSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRP 629
DP+DLKSCY LMIS+VVPRPIA S+ + DG N +PFSY + HDPP + S CR G+KKDT N+ A+ EFVV +MS+WFV AANHTCG+F E DE ++GLT + S V PPR+KESA +MECK+RH+YD+ N+ G +T T + GEVVMFH+ H N EGKP V+ + P+ RLGG+TYGR+GS +D+PRP
Sbjct: 5 DPKDLKSCYPLMISAVVPRPIAFVSSLSADGVGNLSPFSYATVISHDPPCVMFSACRKPGGAKKDTWANIEATKEFVVCVMSEWFVNAANHTCGNFDAEDDEFDLSGLTRVPSAKVKPPRVKESAFHMECKLRHSYDVTNADGVVTATAIVGEVVMFHI--HEAVANVEWEGKPRVDMARYAPVCRLGGDTYGRVGSGYDLPRP 206
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Flavin_Reduct (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF3_9STRA) HSP 1 Score: 239 bits (611), Expect = 1.130e-73 Identity = 116/205 (56.59%), Postives = 147/205 (71.71%), Query Frame = 3
Query: 15 IDPRDLKSCYSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRP 629
+DP L SCY L+ISS VPRPIA S+ +G N APFSYFN V HDPP +A+ +CR G KKD+L N+ A GEFVV+IMSDWF+E+ANH CG F +VDEM ++GLT ++ IV PP + ESA+NMECK+ H Y++ N+ G TTTVV G+VVMFHV +L G KPTV+ + PI+RLGGNTYG + +VFD+PRP
Sbjct: 60 LDPAALASCYGLVISSGVPRPIAFVSSLDSEGRRNLAPFSYFNFVAHDPPLVAIGICRK-RGEKKDSLANIEARGEFVVSIMSDWFIESANHCCGDFSSDVDEMALSGLTAARAKIVEPPLVAESAINMECKLVHKYEVKNAAGTDTTTVVIGQVVMFHVLEAVLDTVTHGPTKPTVHFDKLRPIARLGGNTYGIVNTVFDLPRP 263
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Hypothetical (protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MRI4_9CHLO) HSP 1 Score: 229 bits (585), Expect = 1.440e-69 Identity = 112/198 (56.57%), Postives = 139/198 (70.20%), Query Frame = 3
Query: 36 SCYSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGSKKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRP 629
SCY L+ISS VPRPIAL ST + G VN APFSY +GHDPP +A SVCR G +KDTL N+ + E V++IMS+WFVEAANHTCG+FP E DE K++GLTP+ ST+VAPPR ES V+ ECKVR +D N+ G +TTT+V EVV FH+ L +N G+G V E P+SRLGG+TY V+D+PRP
Sbjct: 77 SCYPLVISSYVPRPIALVSTISSQGVVNLAPFSYSGAMGHDPPLIAFSVCRKPGGLRKDTLANIEETKECVIHIMSEWFVEAANHTCGNFPSEEDEFKLSGLTPVPSTLVAPPRCAESGVHFECKVRELHDQANAAGKVTTTIVVAEVVCFHIREDLYDDNN-GKGPTQVKPEDLRPMSRLGGDTYSTTTYVYDLPRP 273
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Flavin_Reduct (domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C7I8_DIALT) HSP 1 Score: 228 bits (581), Expect = 5.040e-69 Identity = 110/210 (52.38%), Postives = 144/210 (68.57%), Query Frame = 3
Query: 6 HARIDPRDLKSCYSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNG--SKKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRP 629
H +DP L SCY LMIS+ VPRPIA ST++ N APFSY HDPPT+ SV N KKDTL N+ SGEFVV++MS+W+VEAANH CG+FP DE ++GLT + S V PPR+ E+AV ECK+ H +++ N+KG+++ T++ GEVVM H+ + + + +GAG GKPTV + P+SRLGGNTYGR S FD+PRP
Sbjct: 62 HVSLDPTALASCYPLMISAFVPRPIAFVSTRSDKYGGNLAPFSYAGLFNHDPPTVGFSVVSNARAPDGKKDTLANIDESGEFVVHVMSEWYVEAANHCCGAFPRGEDEFDLSGLTRVPSLKVGPPRVGEAAVAFECKLAHRHEMRNAKGEVSATLILGEVVMIHLAAGVCELDGAGAGKPTVRFDALQPMSRLGGNTYGRTTSTFDLPRP 271
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Match: Flavo (protein oxygenase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SEF3_9CHLO) HSP 1 Score: 222 bits (566), Expect = 8.900e-67 Identity = 107/209 (51.20%), Postives = 146/209 (69.86%), Query Frame = 3
Query: 15 IDPRDLKSC--YSLMISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGS--KKDTLVNMLASGEFVVNIMSDWFVEAANHTCGSFPPEVDEMKVAGLTPIQSTIVAPPRIKESAVNMECKVRHTYDIVNSKGDITTTVVFGEVVMFHVFSHLLKENGAGEGKPTVNHEGFMPISRLGGNTYGRLGSVFDIPRP 629
+DP +L Y L+IS+VVPRPIA T + G N APFSYF + HDPP + + +CR+ + + KKDTL N+LA+ EF +N+MS+WFVE+ANHTCG F +VDE+ +AGLTP+ S VAPPR+KES+V++ECK+ HTY++ N G +T T+V G VVMFHV + + +G V+ + + P+SRLGGNTYGR FD+PRP
Sbjct: 67 LDPSELGGARAYPLVISAVVPRPIAFVCTLSAAGVRNLAPFSYFGAMSHDPPHVCIGICRSRSKATGKKDTLANILATKEFTLNMMSEWFVESANHTCGEFDDDVDELSLAGLTPLPSLKVAPPRVKESSVHLECKLVHTYEVRNEYGVVTATIVIGRVVMFHVHKEVAGKTPSGN--VIVDFQRYKPVSRLGGNTYGRTAGTFDLPRP 273 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9262.17319.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9262.17319.1 >prot_E_fasciculatus_S2_contig9262.17319.1 ID=prot_E_fasciculatus_S2_contig9262.17319.1|Name=mRNA_E_fasciculatus_S2_contig9262.17319.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=198bp MISSVVPRPIALTSTQAPDGTVNCAPFSYFNTVGHDPPTLAVSVCRNGNGback to top mRNA from alignment at E_fasciculatus_S2_contig9262:1683..3875+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9262.17319.1 ID=mRNA_E_fasciculatus_S2_contig9262.17319.1|Name=mRNA_E_fasciculatus_S2_contig9262.17319.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2193bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9262:1683..3875+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9262:1683..3875+ >mRNA_E_fasciculatus_S2_contig9262.17319.1 ID=mRNA_E_fasciculatus_S2_contig9262.17319.1|Name=mRNA_E_fasciculatus_S2_contig9262.17319.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=594bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9262:1683..3875+ (Ectocarpus fasciculatus EfasUO2)back to top |