mRNA_E_fasciculatus_S2_contig926.17316.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig926.17316.1
Unique NamemRNA_E_fasciculatus_S2_contig926.17316.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z4_ECTSI)

HSP 1 Score: 460 bits (1183), Expect = 2.110e-162
Identity = 233/250 (93.20%), Postives = 238/250 (95.20%), Query Frame = 1
Query:    1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVK          ADKLPAGQKPKYTGVVSGLTYTVRTTGF SLYRGLAPTL+GSMPKAGIRFGGNSELKK+LAGKENKKL+SGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGI+SDDGAR LSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQ+
Sbjct:    1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKTQ-----LQLADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKILAGKENKKLSSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIVSDDGARPLSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQI 245          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Mitochondrial (carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W7_9STRA)

HSP 1 Score: 325 bits (834), Expect = 2.210e-109
Identity = 169/250 (67.60%), Postives = 198/250 (79.20%), Query Frame = 1
Query:    1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            M+ K     V+LTSG IAG +EA+ VWP+E++K           +KLP G+KPK+TGV SG+ YTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGN+ LKK LA K N KLT  +QF AGFGAGV+EA+ AVTPIET+KTKAIQ N PF+ GV+ ILK EGPAGLYQG  AT+ KQGSNQGLRFMWFN+YK  +  +  R LS +ENLLGGMSAG FSTLGNNPFDVVKTRMQG++A +Y ST+DCF ++
Sbjct:    1 MADKKVKTTVALTSGTIAGGLEAISVWPMEFMKTQ-----LQLMEKLPPGEKPKFTGVFSGIAYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNNFLKKQLADK-NGKLTPTKQFAAGFGAGVVEALVAVTPIETIKTKAIQGNMPFVAGVKHILKTEGPAGLYQGAGATVLKQGSNQGLRFMWFNEYKKWLMGNTNRTLSPLENLLGGMSAGTFSTLGNNPFDVVKTRMQGLNANRYSSTLDCFAKI 244          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMX2_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.950e-102
Identity = 152/247 (61.54%), Postives = 188/247 (76.11%), Query Frame = 1
Query:   10 KSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            K   P++ + +GCIAGAVEA  VWP+EY+K       +        G K  YTG++SGL+YTVRTTGFLSLYRGLAPTLIGS+PKAGIRFG N+ +K  L  K+  KLT G+ F+AG GAGV EA+  V P+ET+KTK I+ N PF QG+R I+K EG +G+YQG + T  KQGSNQGLRFMWFN+YK I+++DG + ++ I  LLGGM+AGCFSTLGNNPFDV+KTRMQG  AA+YKST+DCFRQV
Sbjct:   18 KKRGPLLPMAAGCIAGAVEASSVWPMEYIKT------QLQLQSKVKGAKVPYTGMISGLSYTVRTTGFLSLYRGLAPTLIGSVPKAGIRFGLNAVIKDALRDKDTGKLTIGKNFVAGLGAGVTEALIIVAPVETIKTKCIEQNQPFAQGLRHIIKTEGISGIYQGAFPTALKQGSNQGLRFMWFNEYKRIVTNDGEKQMTPILGLLGGMTAGCFSTLGNNPFDVIKTRMQGSQAAQYKSTLDCFRQV 258          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Mitochondrial (carrier n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPB3_9STRA)

HSP 1 Score: 298 bits (762), Expect = 2.100e-98
Identity = 148/248 (59.68%), Postives = 187/248 (75.40%), Query Frame = 1
Query:    7 KKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            KKS+NP+ ++ +GCIAG VEA  VWP+EY+K        T       G K  YTG++SGL YT+ TTGF SLYRGLAPTLIGS+PKAGIRFG NS +K+ L  K+ K L +G+ F+AG GAGV EA+  V P+ETVKTK I+ N PF++G++ I+K EG  G+YQG +AT  KQGSNQGLRFMWFN+YK  ++++G   L+ I  L GGMSAGCFSTLGNNPFDVVKTRMQG +A++YK T+DCF+Q+
Sbjct:    4 KKSNNPLTAMAAGCIAGGVEATSVWPMEYIK--------TQLQLKSKGSKLPYTGMISGLKYTIETTGFFSLYRGLAPTLIGSIPKAGIRFGLNSVIKEKLRDKDGK-LGAGKNFVAGLGAGVSEALLIVAPVETVKTKVIEMNMPFLEGLKHIIKTEGFGGVYQGAFATALKQGSNQGLRFMWFNEYKNRVTNEGEIPLTPIMGLFGGMSAGCFSTLGNNPFDVVKTRMQGTNASQYKGTLDCFQQI 242          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5N2_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.440e-96
Identity = 145/247 (58.70%), Postives = 184/247 (74.49%), Query Frame = 1
Query:   10 KSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            K  NP++ + +GC+AG +EA  VWP+E++K            +LP      YTG+VSGLTYTVRTTGF SLYRGLAPTLIGS+PKAGIRFG N  +K+ L  K+ K LT G+ FLAG GAGV EA+  V P+ETVKTK I+TN PF++G+  I+K EG  G+Y+G  AT  KQGSNQGLRFMWFNKYK I++ +G + ++ +  L GGMSAGCFSTLGNNPFDVVKTR+QG  A++Y +T+DCF+Q+
Sbjct:    6 KKKNPLLPMAAGCVAGGIEATAVWPMEFIKTQLQLQSNAKGAQLP------YTGMVSGLTYTVRTTGFFSLYRGLAPTLIGSIPKAGIRFGLNGVIKENLRDKDGK-LTLGKNFLAGLGAGVSEALIIVAPVETVKTKCIETNMPFVKGITHIIKTEGIGGIYKGAVATAMKQGSNQGLRFMWFNKYKDIVTKEGDKPMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRLQGTKASQYANTLDCFKQI 245          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Solute (carrier family 25 (Mitochondrial citrate transporter), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUL9_FISSO)

HSP 1 Score: 293 bits (749), Expect = 2.180e-96
Identity = 145/248 (58.47%), Postives = 181/248 (72.98%), Query Frame = 1
Query:    7 KKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            KK  NP  +L +GCIAG +EA  VWP+E++K       +       AG KP YT ++ GL YTVR TGFLSLYRGLAPTLIGS+PKAGIRFG NS +K+ L    N  LT  + F+AG GAGV EA+  VTP+ET+KT+ I+ N PF  G++ IL+ EG  G+YQG  AT  KQGSNQGLRFMWFN+YK I+++DG   ++ +  LLGGMSAGCFSTLGNNPFDV+KTRMQG +A +YK+T+DCF Q+
Sbjct:    5 KKKKNPFTALAAGCIAGGIEATAVWPMEFIKT------QLQLQSKMAGSKPPYTSMMGGLAYTVRETGFLSLYRGLAPTLIGSIPKAGIRFGLNSIIKEQLR-DTNGNLTPAKNFVAGLGAGVAEALIIVTPVETIKTRCIEKNQPFRAGMQEILRKEGWKGIYQGASATALKQGSNQGLRFMWFNEYKRIVTNDGTTPMTPLLGLLGGMSAGCFSTLGNNPFDVIKTRMQGTEARRYKNTLDCFLQI 245          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHJ3_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.450e-96
Identity = 143/247 (57.89%), Postives = 186/247 (75.30%), Query Frame = 1
Query:   10 KSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            K  +P++ + +GC+AGA+EA  VWP+E++K       +    +LP      Y+G+V GLTYTVRTTGF SLYRGLAPTLIGS+PKAGIRFG N+ +K  L  K+ K LT G+ F+AG GAGV EA+  V P+ET+KTK I+TN+PF++G++ I+K EG  G+YQG  AT  KQGSNQGLRFMWFN+YK I+++ G + ++ +  L GGMSAGCFSTLGNNPFDVVKTRMQG  A++Y  T+DCF+QV
Sbjct:    7 KKKSPLLPMAAGCVAGAIEATAVWPMEFIKTQLQLQSKAKGAQLP------YSGMVGGLTYTVRTTGFFSLYRGLAPTLIGSIPKAGIRFGLNAVIKDNLRDKDGK-LTMGKNFIAGLGAGVSEALIIVAPVETIKTKCIETNSPFVEGLKHIIKTEGIGGIYQGAAATAMKQGSNQGLRFMWFNEYKQIVTNHGEKEMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRMQGTKASRYAGTLDCFKQV 246          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM9_9STRA)

HSP 1 Score: 292 bits (747), Expect = 4.110e-96
Identity = 147/254 (57.87%), Postives = 186/254 (73.23%), Query Frame = 1
Query:    1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIIS----DDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            M+KKSS+P V++ +G IAG +E +CVWP+E++K           +K   GQKPK+TG++ G  Y + + GFL LYRGLAPTL+GS+PKAGIRFG N++ KK+LAG + K  T   QF AG  AG +EA  A TPIETVKTK IQTN+ F+ G+R ++  EG  GLYQG+ AT+ KQG NQGLRFMWFN+YKG +      DG+  L+ I++LLGGMSAG FSTLG NPFDVVKTRMQGVDA KYK T+DCF+ +
Sbjct:    1 MAKKSSDPKVAILAGSIAGGIETVCVWPMEFIKTQ-----LQLQEKAATGQKPKFTGMIGGFRYVISSQGFLGLYRGLAPTLVGSLPKAGIRFGANAQFKKMLAGPDGKVSTK-SQFFAGLMAGAIEATLATTPIETVKTKLIQTNSGFVSGIRQVMATEGIGGLYQGLQATVLKQGFNQGLRFMWFNEYKGALERWGYTDGS-GLAPIQSLLGGMSAGVFSTLGTNPFDVVKTRMQGVDAKKYKGTLDCFKTI 247          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z823_9STRA)

HSP 1 Score: 288 bits (737), Expect = 1.350e-94
Identity = 145/247 (58.70%), Postives = 187/247 (75.71%), Query Frame = 1
Query:   10 KSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            KSSNP+ ++++GCIAGAVEA  VWP+E++K +       +  KLP      Y G++ GL+YTVRTTGF SLYRGLAPTL+GS+PKAGIRFG NS +K+ L G E+ KLT  + F+AG GAGV EA+  V P+ETVKT+ I+ N PF+ G++ I+++EG  G+Y+G  AT  KQGSNQGLRFMWFN+YK  I++DG +  + +  L GGMSAGCFST+GNNPFDVVKTRMQG  A +YK+T+DCF QV
Sbjct:    5 KSSNPLTAMSAGCIAGAVEATAVWPMEFIK-TQLQLGSKSGSKLP------YGGMIEGLSYTVRTTGFFSLYRGLAPTLVGSVPKAGIRFGLNSLIKEKLRG-EDGKLTPAKNFVAGLGAGVSEALLVVAPVETVKTRVIELNMPFLGGLKHIVRSEGIGGVYKGASATAMKQGSNQGLRFMWFNEYKKRITNDGEKPXTPLMGLFGGMSAGCFSTIGNNPFDVVKTRMQGTQATRYKNTMDCFVQV 243          
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Mitochondrial (tricarboxylate transport protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVE3_9STRA)

HSP 1 Score: 290 bits (742), Expect = 3.390e-94
Identity = 145/249 (58.23%), Postives = 187/249 (75.10%), Query Frame = 1
Query:    4 SKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
            SKK    V+SL +G IAG +EA CVWP+EY+K           ++LPAG+KPK+TG++SG+ YTV+  GFL+LYRGL PTLI + PKAGIRFG N+  KK L   + K LT G+ FLAG GAG++E+IF VTP+ETVKTK I  N  F  GV+ I+ +EG AG+YQG+ ATI KQGSNQGLRFM+FN+YK  ++++G   L+ + + LGGMSAGCFSTL NNP DV+KTRMQG+DAAKYK+ +DC +Q+
Sbjct:   50 SKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQ-----LQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGK-LTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQL 292          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.110e-16293.20protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z4... [more]
Mitochondrial2.210e-10967.60carrier domain-containing protein n=1 Tax=Tribonem... [more]
Hypothetical1.950e-10261.54protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
Mitochondrial2.100e-9859.68carrier n=1 Tax=Fragilariopsis cylindrus CCMP1102 ... [more]
Hypothetical1.440e-9658.70protein n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
Solute2.180e-9658.47carrier family 25 (Mitochondrial citrate transport... [more]
Hypothetical2.450e-9657.89protein (Fragment) n=1 Tax=Minutocellus polymorphu... [more]
Hypothetical4.110e-9657.87protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Uncharacterized1.350e-9458.70protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
Mitochondrial3.390e-9458.23tricarboxylate transport protein n=2 Tax=Monodopsi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig926contigE_fasciculatus_S2_contig926:21495..25376 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score460.7
Seed ortholog evalue4.4e-127
Seed eggNOG ortholog2880.D7G1Z4
Model size750
KEGG koko:K15100
KEGG TC2.A.29.7
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.mitochondrial tricarboxylic acid transmembrane transport
EggNOG OGsKOG0756@1,KOG0756@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-07_003590.1
Cds size750
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842576.040132-CDS-E_fasciculatus_S2_contig926:21494..216261696842576.040132-CDS-E_fasciculatus_S2_contig926:21494..21626Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig926 21495..21626 +
1696842576.0595973-CDS-E_fasciculatus_S2_contig926:23334..235051696842576.0595973-CDS-E_fasciculatus_S2_contig926:23334..23505Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig926 23335..23505 +
1696842576.0695562-CDS-E_fasciculatus_S2_contig926:24305..245421696842576.0695562-CDS-E_fasciculatus_S2_contig926:24305..24542Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig926 24306..24542 +
1696842576.0801764-CDS-E_fasciculatus_S2_contig926:25166..253761696842576.0801764-CDS-E_fasciculatus_S2_contig926:25166..25376Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig926 25167..25376 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig926.17316.1prot_E_fasciculatus_S2_contig926.17316.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig926 21495..25376 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig926.17316.1

>prot_E_fasciculatus_S2_contig926.17316.1 ID=prot_E_fasciculatus_S2_contig926.17316.1|Name=mRNA_E_fasciculatus_S2_contig926.17316.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=250bp
MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAG
QKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELK
KLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFM
QGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGAR
ALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV
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mRNA from alignment at E_fasciculatus_S2_contig926:21495..25376+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig926.17316.1 ID=mRNA_E_fasciculatus_S2_contig926.17316.1|Name=mRNA_E_fasciculatus_S2_contig926.17316.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3882bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig926:21495..25376+ (Ectocarpus fasciculatus EfasUO2)
ATGTCGAAGAAAAGCTCGAACCCGGTGGTGTCGCTGACTTCGGGATGCAT CGCCGGAGCAGTGGAAGCCATGTGTGTGTGGCCGCTTGAGTACGTCAAGG CAAGTGATGGACACTTTCACGAGACGGCAGCAGTTGCTGAGAAAAAAACG GTGTTCGGTCGGTGGGTACAAGTAAGGTCTTTGATTGACCCATCACATGC GGCGGCAGCATCACGGTCATCATCTTGTTGTGTAACGATAGCATACACGC ACGGGATGAACGGACTTGTCCGCAGACTGCTGTGGTCGACGTACTGCTGT TTGGTTAATGAAAAGCTTGCTGCTGGATTGTCTTCGTTTTTGCCCGAAAT AAATTGCTTTTGAATAACGGCGAAGTCTTGTACGTTGGTGCCCCACCGCC CCAGCCTTGCGAAGCAGCAGCCAGCGGATAGTGCCCAGCTACTGCTGCTG CTGCTGCTGCTGCTGCTGTTGCTGTATGCGAGCGCGATGCACGGGTTCCA GCGTAGTAGAGGAAAGAACGACGAAATCGGTCATCTTTTCCCCTCTTTTT CGAAGTTTGCTCGCGTTTACCTGTGTGGCAGTACATAAAGTGCTGCAACA ATCATCGCGTACAGGTAGGAGGTAGGAGACAGCAGCAGTAGTGGACAGGG TTGCGAAAATCGAAATTGCATCTGTACAGCGCAGATTGTATTGTAGTACC TGAGGGTGCACGATGTGATGTTGAGCAGTGCACCACCACAGAACTCGGAG AACTAAAAAGCAAGAAGATATTATTTGCTCGTATGTAAGGACAAAAAGCA GTGTCAATTTGTTTTCGAAATTGCCGAGTTACGATGAGGACCACTCCTTT GCACGGAGTGGGTGCACGTATGCTACTACGGAGTGCAGGTCGTGCTTTTG GCCTAGGCGTTACTTGGGAGAGAGGTTTATAACGCCGCCTGCGATTAAGC GCTAGCGGCAGACGGCGGTGTGTGTAGGATGCAACACGAACAGACACCTG TGAACGGATAATCACTCCGCATGGTTGGCTTCTTTGGGATGGCGGAGGAA CAAAAAGCGACATTTGATATTGATGGCTTGGCCCGTCAGCCCGACTTGAT GGTGGTGCTATGCATATGCATACTAACGATAGCTGCTGCAGCAGGACGAT GCTAGGTCGTCCAGAGTGTCCCGTGCCTCTCTGCTTGCCCACGTGCCTTT CCATGTTAACCTTGAGTTCACATATATTTACCTTTCTCCGAGCGTTGCGG CGCATATCAGCGAAAGTCACAAGACAAATCCTGCTTCTGCCCGTGTGCCA ATTCGTTCTCATATTCTTCCTGGGATCGATCGAATCACGCATTTTTTATG CTTCATGGTTGGCTTGGGCTGATGTGCTGCTGCTTCTCCTCGTCTTCCTC CTGCTGCTGCTGCTGCTGCTGCTCGCGTTGCTTGACTCGGTGTCATTGCT CCTGGTATACTGGGCTATCCTGCTGCAACAGACCCAGCTCCAGCTCGCGG TGAGTACGATGACCCTGCCGGAGTTGTCGCTGCTTTTAGCTGTCGATGCG CGCGTGACTCGGTGTTTCAGCACCTAACACGAAGGACGGACGGGGGGGGG GTGTTGTACGCCTGTGTGCTTGTGTTGCGGTACGGTCGGTATACCCTCCA TTCTCGCCCCTTGTGGTTCAGCGCCGACGTTGTTGTGACGCCGTCTCGAT CTTGTGTTGTCTTCCTCGCCGCCCCACACGGCACTACCAACAACCAACAA CAACAACAACAACAACAACAACAACAACACTGTACCACCTACGTTTGCCA TTCTCTCTCGCGGCCTTCATGACGCGGCTCGTGTCCGCAGGACAAGCTGC CGGCGGGCCAGAAGCCCAAGTACACCGGGGTGGTGAGCGGGCTCACGTAC ACCGTGCGGACAACGGGGTTCCTCTCGCTCTACCGAGGGCTGGCGCCGAC CCTGATTGGCTCGATGCCCAAGGCCGGCATCCGGTTCGGGGGTAACTCGG AGCTCAAGAAGGTTGGTTAGTTGGTCGCTTGCCCGTTCTTTGCGACACGC GTCGCCTGCGGTCATCGTTGAGCGATGATCCTTCCCCTCCATGTACCCCG ACACTTGTGCATGTCCCATCTATTTTTTAGACGCCAGTCTACACACGTTC GGTTTACACTTCTGATGAATCAGCCGAGGTCACGCATGAGCTTTTATCGT ATTTTGTTTATTTTTTGCTTTGTTTCTGTGTTAAGCGCCACAGACGCGCC GGTAGGTGTGCGTGTCGTGGGGGTGAATTTGCGAGATGGTTGTTGTGGGG ACTGATCAAGGGATGAAAAAAGCGGCGTGTTATTTTCTTCTTTTTTTAAT TCGCGCGCGCGTCCCACGCGTGAAAGACGTTGTCTTTGGCGGTGTTCATG TTTTTTGCATCGGGTTCCCCAGACCGGCGTCCAGATTCTGGCGAGCATGA GACGGACTCCTTCATGAAATCCGAGCAGCAGCTCCAGCGCCAACAATCAA GAGCACTACTCCGCCTTTTTTTGTTTGTAGTCTCACCTTGCATGGCCAAC AGACCGTCGATGTGTTGACGGAATCAACATTGCCGCTGTCAGATGTTGGA GGTTGGGCGAGGAAGACCTCAGGGAGCTCAGCCAAAGGGTCAATTTCTAT TATTTTAGTATTTACCATAATTTATGCTCGATTCCGTGTTGTCTTGTGTT CTCACCCGCACGTTACGTCCTTTACCCGCGTTGCTACCGTGTTTTTTCAC GCCCGGTGGTGGTGCACCGACAAACTGCGTCCCGACGACGACGTCGACGA CCGCGACGCAGCTGCTAGCGGGCAAGGAGAACAAGAAGCTCACCTCCGGG GAGCAATTCCTGGCGGGCTTCGGCGCGGGGGTGCTGGAGGCCATCTTCGC GGTGACGCCCATCGAGACCGTAAAGACGAAGGCCATCCAGACCAACGCCC CCTTCATGCAGGGGGTCAGGACGATCCTCAAGAACGAGGGGCCCGCCGGA CTGTACCAGGGGGTGTGGGCCACCATCGCCAAGCAGGGCTCCAACCAGGT GCGTGCGTGTTTGTGTGTTGGTCGGTGGGTGCTGCTGTGTGTCGTGTGCT TCGCAGAAGGGTTGGTGCTTTATGAAGGGGTGCGGGAGTTGGGCGGAAGG TGGGGGTAGTGCTATTGGTGCTGTTGCTGTTGTCCTCGATGCTATGGATA TGATTGTGGAATTAGCCTCCCCCTTTGCCGTGCATGTATCGATTTTAGGT GAGTTTGAGGAATGAGTTACGGACTGAGGCCTTTCACGCTGTTCCCGCTT TTGTCGGCCCAACTCTCAAACCCTTTAGAACTTGGAATATACTACCGCTG TTACGGACACTCAAGGGAGCGGCGCCCCACGCCCCACTCACTACCTGGTT TGCAAGCAATAACCCCAGCTCACGCTTTTGTTGTTGCCCACCGGACCGCT TGCAGCGCACGTGCCGTGTTCAATCATGCGAAAGTCGTGTTTTTGAGTCC TTATAAACAGGGATGATTTGAACGTGTCACAGCTCGGGCCGTTGCGGAGA GTTTTTTTTTGTATCGTGGTGCAGAGAGAAATTTATATGAGCGGCTCAGT ATCTACATATATCTTGACATTTCTCCGTGCACTCCACCCTCGACGCCTCC TCTCGTCGCCGGTACAACATAGGGGCTCCGATTCATGTGGTTCAACAAGT ACAAGGGGATCATCAGCGACGACGGAGCGCGAGCGCTGTCGGACATCGAG AACCTCTTGGGCGGCATGTCCGCCGGCTGCTTCAGCACGCTGGGAAACAA CCCTTTCGACGTGGTGAAGACGAGGATGCAGGGGGTCGACGCGGCCAAGT ACAAGAGCACGGTCGACTGCTTCAGACAGGTA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig926:21495..25376+

>mRNA_E_fasciculatus_S2_contig926.17316.1 ID=mRNA_E_fasciculatus_S2_contig926.17316.1|Name=mRNA_E_fasciculatus_S2_contig926.17316.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=750bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig926:21495..25376+ (Ectocarpus fasciculatus EfasUO2)
ATGTCGAAGAAAAGCTCGAACCCGGTGGTGTCGCTGACTTCGGGATGCAT
CGCCGGAGCAGTGGAAGCCATGTGTGTGTGGCCGCTTGAGTACGTCAAGG
CAAGTGATGGACACTTTCACGAGACGGCAGCAGACAAGCTGCCGGCGGGC
CAGAAGCCCAAGTACACCGGGGTGGTGAGCGGGCTCACGTACACCGTGCG
GACAACGGGGTTCCTCTCGCTCTACCGAGGGCTGGCGCCGACCCTGATTG
GCTCGATGCCCAAGGCCGGCATCCGGTTCGGGGGTAACTCGGAGCTCAAG
AAGCTGCTAGCGGGCAAGGAGAACAAGAAGCTCACCTCCGGGGAGCAATT
CCTGGCGGGCTTCGGCGCGGGGGTGCTGGAGGCCATCTTCGCGGTGACGC
CCATCGAGACCGTAAAGACGAAGGCCATCCAGACCAACGCCCCCTTCATG
CAGGGGGTCAGGACGATCCTCAAGAACGAGGGGCCCGCCGGACTGTACCA
GGGGGTGTGGGCCACCATCGCCAAGCAGGGCTCCAACCAGGGGCTCCGAT
TCATGTGGTTCAACAAGTACAAGGGGATCATCAGCGACGACGGAGCGCGA
GCGCTGTCGGACATCGAGAACCTCTTGGGCGGCATGTCCGCCGGCTGCTT
CAGCACGCTGGGAAACAACCCTTTCGACGTGGTGAAGACGAGGATGCAGG
GGGTCGACGCGGCCAAGTACAAGAGCACGGTCGACTGCTTCAGACAGGTA
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