mRNA_E_fasciculatus_S2_contig926.17316.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z4_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 2.110e-162 Identity = 233/250 (93.20%), Postives = 238/250 (95.20%), Query Frame = 1
Query: 1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVK ADKLPAGQKPKYTGVVSGLTYTVRTTGF SLYRGLAPTL+GSMPKAGIRFGGNSELKK+LAGKENKKL+SGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGI+SDDGAR LSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQ+
Sbjct: 1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKTQ-----LQLADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKILAGKENKKLSSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIVSDDGARPLSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQI 245
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Mitochondrial (carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W7_9STRA) HSP 1 Score: 325 bits (834), Expect = 2.210e-109 Identity = 169/250 (67.60%), Postives = 198/250 (79.20%), Query Frame = 1
Query: 1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
M+ K V+LTSG IAG +EA+ VWP+E++K +KLP G+KPK+TGV SG+ YTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGN+ LKK LA K N KLT +QF AGFGAGV+EA+ AVTPIET+KTKAIQ N PF+ GV+ ILK EGPAGLYQG AT+ KQGSNQGLRFMWFN+YK + + R LS +ENLLGGMSAG FSTLGNNPFDVVKTRMQG++A +Y ST+DCF ++
Sbjct: 1 MADKKVKTTVALTSGTIAGGLEAISVWPMEFMKTQ-----LQLMEKLPPGEKPKFTGVFSGIAYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNNFLKKQLADK-NGKLTPTKQFAAGFGAGVVEALVAVTPIETIKTKAIQGNMPFVAGVKHILKTEGPAGLYQGAGATVLKQGSNQGLRFMWFNEYKKWLMGNTNRTLSPLENLLGGMSAGTFSTLGNNPFDVVKTRMQGLNANRYSSTLDCFAKI 244
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMX2_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.950e-102 Identity = 152/247 (61.54%), Postives = 188/247 (76.11%), Query Frame = 1
Query: 10 KSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
K P++ + +GCIAGAVEA VWP+EY+K + G K YTG++SGL+YTVRTTGFLSLYRGLAPTLIGS+PKAGIRFG N+ +K L K+ KLT G+ F+AG GAGV EA+ V P+ET+KTK I+ N PF QG+R I+K EG +G+YQG + T KQGSNQGLRFMWFN+YK I+++DG + ++ I LLGGM+AGCFSTLGNNPFDV+KTRMQG AA+YKST+DCFRQV
Sbjct: 18 KKRGPLLPMAAGCIAGAVEASSVWPMEYIKT------QLQLQSKVKGAKVPYTGMISGLSYTVRTTGFLSLYRGLAPTLIGSVPKAGIRFGLNAVIKDALRDKDTGKLTIGKNFVAGLGAGVTEALIIVAPVETIKTKCIEQNQPFAQGLRHIIKTEGISGIYQGAFPTALKQGSNQGLRFMWFNEYKRIVTNDGEKQMTPILGLLGGMTAGCFSTLGNNPFDVIKTRMQGSQAAQYKSTLDCFRQV 258
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Mitochondrial (carrier n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPB3_9STRA) HSP 1 Score: 298 bits (762), Expect = 2.100e-98 Identity = 148/248 (59.68%), Postives = 187/248 (75.40%), Query Frame = 1
Query: 7 KKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
KKS+NP+ ++ +GCIAG VEA VWP+EY+K T G K YTG++SGL YT+ TTGF SLYRGLAPTLIGS+PKAGIRFG NS +K+ L K+ K L +G+ F+AG GAGV EA+ V P+ETVKTK I+ N PF++G++ I+K EG G+YQG +AT KQGSNQGLRFMWFN+YK ++++G L+ I L GGMSAGCFSTLGNNPFDVVKTRMQG +A++YK T+DCF+Q+
Sbjct: 4 KKSNNPLTAMAAGCIAGGVEATSVWPMEYIK--------TQLQLKSKGSKLPYTGMISGLKYTIETTGFFSLYRGLAPTLIGSIPKAGIRFGLNSVIKEKLRDKDGK-LGAGKNFVAGLGAGVSEALLIVAPVETVKTKVIEMNMPFLEGLKHIIKTEGFGGVYQGAFATALKQGSNQGLRFMWFNEYKNRVTNEGEIPLTPIMGLFGGMSAGCFSTLGNNPFDVVKTRMQGTNASQYKGTLDCFQQI 242
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5N2_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.440e-96 Identity = 145/247 (58.70%), Postives = 184/247 (74.49%), Query Frame = 1
Query: 10 KSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
K NP++ + +GC+AG +EA VWP+E++K +LP YTG+VSGLTYTVRTTGF SLYRGLAPTLIGS+PKAGIRFG N +K+ L K+ K LT G+ FLAG GAGV EA+ V P+ETVKTK I+TN PF++G+ I+K EG G+Y+G AT KQGSNQGLRFMWFNKYK I++ +G + ++ + L GGMSAGCFSTLGNNPFDVVKTR+QG A++Y +T+DCF+Q+
Sbjct: 6 KKKNPLLPMAAGCVAGGIEATAVWPMEFIKTQLQLQSNAKGAQLP------YTGMVSGLTYTVRTTGFFSLYRGLAPTLIGSIPKAGIRFGLNGVIKENLRDKDGK-LTLGKNFLAGLGAGVSEALIIVAPVETVKTKCIETNMPFVKGITHIIKTEGIGGIYKGAVATAMKQGSNQGLRFMWFNKYKDIVTKEGDKPMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRLQGTKASQYANTLDCFKQI 245
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Solute (carrier family 25 (Mitochondrial citrate transporter), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUL9_FISSO) HSP 1 Score: 293 bits (749), Expect = 2.180e-96 Identity = 145/248 (58.47%), Postives = 181/248 (72.98%), Query Frame = 1
Query: 7 KKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
KK NP +L +GCIAG +EA VWP+E++K + AG KP YT ++ GL YTVR TGFLSLYRGLAPTLIGS+PKAGIRFG NS +K+ L N LT + F+AG GAGV EA+ VTP+ET+KT+ I+ N PF G++ IL+ EG G+YQG AT KQGSNQGLRFMWFN+YK I+++DG ++ + LLGGMSAGCFSTLGNNPFDV+KTRMQG +A +YK+T+DCF Q+
Sbjct: 5 KKKKNPFTALAAGCIAGGIEATAVWPMEFIKT------QLQLQSKMAGSKPPYTSMMGGLAYTVRETGFLSLYRGLAPTLIGSIPKAGIRFGLNSIIKEQLR-DTNGNLTPAKNFVAGLGAGVAEALIIVTPVETIKTRCIEKNQPFRAGMQEILRKEGWKGIYQGASATALKQGSNQGLRFMWFNEYKRIVTNDGTTPMTPLLGLLGGMSAGCFSTLGNNPFDVIKTRMQGTEARRYKNTLDCFLQI 245
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHJ3_9STRA) HSP 1 Score: 291 bits (746), Expect = 2.450e-96 Identity = 143/247 (57.89%), Postives = 186/247 (75.30%), Query Frame = 1
Query: 10 KSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
K +P++ + +GC+AGA+EA VWP+E++K + +LP Y+G+V GLTYTVRTTGF SLYRGLAPTLIGS+PKAGIRFG N+ +K L K+ K LT G+ F+AG GAGV EA+ V P+ET+KTK I+TN+PF++G++ I+K EG G+YQG AT KQGSNQGLRFMWFN+YK I+++ G + ++ + L GGMSAGCFSTLGNNPFDVVKTRMQG A++Y T+DCF+QV
Sbjct: 7 KKKSPLLPMAAGCVAGAIEATAVWPMEFIKTQLQLQSKAKGAQLP------YSGMVGGLTYTVRTTGFFSLYRGLAPTLIGSIPKAGIRFGLNAVIKDNLRDKDGK-LTMGKNFIAGLGAGVSEALIIVAPVETIKTKCIETNSPFVEGLKHIIKTEGIGGIYQGAAATAMKQGSNQGLRFMWFNEYKQIVTNHGEKEMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRMQGTKASRYAGTLDCFKQV 246
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM9_9STRA) HSP 1 Score: 292 bits (747), Expect = 4.110e-96 Identity = 147/254 (57.87%), Postives = 186/254 (73.23%), Query Frame = 1
Query: 1 MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIIS----DDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
M+KKSS+P V++ +G IAG +E +CVWP+E++K +K GQKPK+TG++ G Y + + GFL LYRGLAPTL+GS+PKAGIRFG N++ KK+LAG + K T QF AG AG +EA A TPIETVKTK IQTN+ F+ G+R ++ EG GLYQG+ AT+ KQG NQGLRFMWFN+YKG + DG+ L+ I++LLGGMSAG FSTLG NPFDVVKTRMQGVDA KYK T+DCF+ +
Sbjct: 1 MAKKSSDPKVAILAGSIAGGIETVCVWPMEFIKTQ-----LQLQEKAATGQKPKFTGMIGGFRYVISSQGFLGLYRGLAPTLVGSLPKAGIRFGANAQFKKMLAGPDGKVSTK-SQFFAGLMAGAIEATLATTPIETVKTKLIQTNSGFVSGIRQVMATEGIGGLYQGLQATVLKQGFNQGLRFMWFNEYKGALERWGYTDGS-GLAPIQSLLGGMSAGVFSTLGTNPFDVVKTRMQGVDAKKYKGTLDCFKTI 247
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z823_9STRA) HSP 1 Score: 288 bits (737), Expect = 1.350e-94 Identity = 145/247 (58.70%), Postives = 187/247 (75.71%), Query Frame = 1
Query: 10 KSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
KSSNP+ ++++GCIAGAVEA VWP+E++K + + KLP Y G++ GL+YTVRTTGF SLYRGLAPTL+GS+PKAGIRFG NS +K+ L G E+ KLT + F+AG GAGV EA+ V P+ETVKT+ I+ N PF+ G++ I+++EG G+Y+G AT KQGSNQGLRFMWFN+YK I++DG + + + L GGMSAGCFST+GNNPFDVVKTRMQG A +YK+T+DCF QV
Sbjct: 5 KSSNPLTAMSAGCIAGAVEATAVWPMEFIK-TQLQLGSKSGSKLP------YGGMIEGLSYTVRTTGFFSLYRGLAPTLVGSVPKAGIRFGLNSLIKEKLRG-EDGKLTPAKNFVAGLGAGVSEALLVVAPVETVKTRVIELNMPFLGGLKHIVRSEGIGGVYKGASATAMKQGSNQGLRFMWFNEYKKRITNDGEKPXTPLMGLFGGMSAGCFSTIGNNPFDVVKTRMQGTQATRYKNTMDCFVQV 243
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Match: Mitochondrial (tricarboxylate transport protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVE3_9STRA) HSP 1 Score: 290 bits (742), Expect = 3.390e-94 Identity = 145/249 (58.23%), Postives = 187/249 (75.10%), Query Frame = 1
Query: 4 SKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGQKPKYTGVVSGLTYTVRTTGFLSLYRGLAPTLIGSMPKAGIRFGGNSELKKLLAGKENKKLTSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIISDDGARALSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQV 750
SKK V+SL +G IAG +EA CVWP+EY+K ++LPAG+KPK+TG++SG+ YTV+ GFL+LYRGL PTLI + PKAGIRFG N+ KK L + K LT G+ FLAG GAG++E+IF VTP+ETVKTK I N F GV+ I+ +EG AG+YQG+ ATI KQGSNQGLRFM+FN+YK ++++G L+ + + LGGMSAGCFSTL NNP DV+KTRMQG+DAAKYK+ +DC +Q+
Sbjct: 50 SKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQ-----LQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGK-LTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQL 292 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig926.17316.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig926.17316.1 >prot_E_fasciculatus_S2_contig926.17316.1 ID=prot_E_fasciculatus_S2_contig926.17316.1|Name=mRNA_E_fasciculatus_S2_contig926.17316.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=250bp MSKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKASDGHFHETAADKLPAGback to top mRNA from alignment at E_fasciculatus_S2_contig926:21495..25376+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig926.17316.1 ID=mRNA_E_fasciculatus_S2_contig926.17316.1|Name=mRNA_E_fasciculatus_S2_contig926.17316.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3882bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig926:21495..25376+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig926:21495..25376+ >mRNA_E_fasciculatus_S2_contig926.17316.1 ID=mRNA_E_fasciculatus_S2_contig926.17316.1|Name=mRNA_E_fasciculatus_S2_contig926.17316.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=750bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig926:21495..25376+ (Ectocarpus fasciculatus EfasUO2)back to top |