mRNA_E_fasciculatus_S2_contig925.17307.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig925.17307.1
Unique NamemRNA_E_fasciculatus_S2_contig925.17307.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Putative (BAX inhibitor n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM79_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 1.730e-153
Identity = 248/264 (93.94%), Postives = 251/264 (95.08%), Query Frame = 2 
Query:   65 MASSPLGNMFGREINVSALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWLHVGGLLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGSRSNSSXXXXXXXYNYSSGSRTGRTTRR 856
            MASSPLGNMFGREINVSALLKANDITLDVQRHLANVYAALAATVL CAFGAAADLWLHVGGLLT VAGLGAMMWLAADQDK NYPKRVGILLLFGLLKG SLGPLIDMVLHVDPSILVTSLLATTTVFVCFAG ALFAKRRSYLYLGGLLSSVLSVLM+ASLLNLFMR+EFLMSIQLYGGLAVFCGYVIFDTQL VEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEG RS+  XXXXXX   Y SGSRTGRTTRR
Sbjct:    1 MASSPLGNMFGREINVSALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLTVVAGLGAMMWLAADQDKNNYPKRVGILLLFGLLKGLSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGTALFAKRRSYLYLGGLLSSVLSVLMVASLLNLFMRLEFLMSIQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGDRSSXXXXXXXXSSYYGSGSRTGRTTRR 264
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Bax (inhibitor-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSC7_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.120e-58
Identity = 112/227 (49.34%), Postives = 155/227 (68.28%), Query Frame = 2 
Query:  107 NVSALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWLHVGGLLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGSRSNS 787
            ++ ALLKANDI++ VQ+HL  VYAALAAT+L    G A D  L + GL +T   LG +++L    DK    KR+G+LL      G ++GPL+ + L VD SI++T+ LAT  +F+CF G+AL  KRR+Y+YL  ++SS   V+ + SL+NLF R   L +  LY GL VFCGYV+FDTQ+ +EKA+LGD DF  HA ELF+DF+ IFVR+ +IL+RN +K+  +  S
Sbjct:   11 DLGALLKANDISIPVQQHLVRVYAALAATILVAGVGVALDAMLDLAGLTSTFGSLGLIIYLFF-VDKQLVAKRMGVLLTIAACMGINIGPLVSVALDVDASIVITAFLATAVIFLCFTGSALIEKRRTYMYLISVISSATLVMSMISLVNLFTRSIALYNAHLYMGLLVFCGYVLFDTQMIIEKASLGDLDFIGHALELFLDFINIFVRLLVILLRNAEKKEKKRES 236
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBH3_GLOUD)

HSP 1 Score: 206 bits (525), Expect = 1.620e-57
Identity = 121/247 (48.99%), Postives = 155/247 (62.75%), Query Frame = 2 
Query:   86 NMFGREINVS----ALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWLHVG--------GLLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGSRSNSS 790
            NMF    + S    A+LK + I+ DVQ+HL  VYA L+  VLT A  A A L L           GLL      G  +WL  +    N+ KR GILL+     G S+  LI++ L VDPSIL+T+ L TT VF+CF G+AL A RRSYLYLG +LSS LS +++ + LN+F R   L S  LYGGL VFCGYV+FDTQ+ +EKA++GD+D   HA ELF+DFV IFVRI +IL++N DK+     SS
Sbjct:    2 NMFSTSASPSWDLQAMLKTSGISADVQQHLVRVYATLSTCVLTAALSAGAVLALSSSAVENAQWMGLLAFFGATGGSVWLHLEPTY-NHQKRFGILLMVAASMGVSMSALIEIALEVDPSILITAFLMTTMVFLCFTGSALLATRRSYLYLGAILSSALSTMVLLNFLNIFFRSTMLYSASLYGGLVVFCGYVVFDTQMIIEKASMGDKDSLRHALELFLDFVSIFVRIMVILIQNADKKKRAETSS 247
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: BAX (inhibitor (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GBE8_9CRUS)

HSP 1 Score: 206 bits (524), Expect = 2.050e-57
Identity = 110/228 (48.25%), Postives = 161/228 (70.61%), Query Frame = 2 
Query:  101 EINVSALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWLHVGG---LLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAK-RRSYLYLGGLLSSVLSVLMIASLLN-LFMRVE-FLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDK 766
            +I++  +L+ + ++ +V+ H++ VYA LA+T+L CAFGA A +   +GG    L  +A +G ++WL  + DKTNY KR+ ++ LFG  +G ++GPLI + + VD SI+VT+ L T TVF CF+ +AL +  +RSYLYLGG+LSS LSV+++ SLL  +F  +   + SI LYGGL +F GY+++DTQ+ V KA  GD DF WH+ ELF+DF+ +FVRI IILMRN  K
Sbjct:   20 DISLEKMLRLSHLSDNVRVHISKVYAVLASTLLCCAFGAYAQIVFRIGGQTQFLPFIASIGILLWLGLESDKTNYVKRISLVSLFGFFQGLTIGPLIGLAITVDSSIVVTAALTTATVFTCFSLSALLSSGKRSYLYLGGMLSSGLSVMLLLSLLQFIFPSISGAVFSINLYGGLILFLGYILYDTQVMVIKAEAGDPDFVWHSLELFLDFIAVFVRILIILMRNSKK 247
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Bax (inhibitor-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4M5_PYTIN)

HSP 1 Score: 206 bits (524), Expect = 2.880e-57
Identity = 116/242 (47.93%), Postives = 156/242 (64.46%), Query Frame = 2 
Query:   95 GREINVSALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWLHVG-----------GLLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGSRSNS 787
            G   +VSA+LK + I++DVQRHL  VYAAL+A VLT A    A + L              GL++ +   G  +WL  +    N+ KR  +L++     G SL  L+ + L VDP+IL+T+ L TTTVF+CF G+AL A RRSYLYLGGLLSS +S +++ S+ N+F R   +    LY GLA+FC YVIFDTQ+ +EKA+LGD+D   HA ELF+DFV IFVRI +IL++N  K+ S S S
Sbjct:   14 GASWDVSAMLKTSGISVDVQRHLVQVYAALSACVLTAAITCGAVVLLSPTPLYMSKMSGWIGLISFLGATGGAVWLQMEPPH-NFHKRFAVLMMISAAMGLSLSALVALTLEVDPTILITAFLMTTTVFLCFTGSALLATRRSYLYLGGLLSSAMSTMLVMSIFNIFFRSTMVYMAHLYLGLAIFCAYVIFDTQMIIEKASLGDKDSLKHALELFLDFVSIFVRILVILLQNSGKKRSNSES 254
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Inhibitor (of apoptosis-promoting Bax1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGD5_9STRA)

HSP 1 Score: 205 bits (522), Expect = 8.450e-57
Identity = 107/218 (49.08%), Postives = 153/218 (70.18%), Query Frame = 2 
Query:  113 SALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWLHVGGLLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDK 766
            SA  K + +T +V++H+A+VY ALA T++  A G    L  + GGLL+ +   GA++ L++    +N+  R+G+LL  GLL+G ++G L+ + L ++P+I++ +   T  VF CFA AAL AKRR+YLYLGG+L SV S++ + SLLN+FMR   L  +QL+GGL  FCG+V+FDTQL +EKA  G RD A HA ELF+DFV IFVRI II++RN +K
Sbjct:   22 SAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEK 239
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2C6_PYTOL)

HSP 1 Score: 204 bits (519), Expect = 1.380e-56
Identity = 113/239 (47.28%), Postives = 160/239 (66.95%), Query Frame = 2 
Query:  107 NVSALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWL---------HVG--GLLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGSRSNSS 790
            ++ A+LK + I+ DVQ+HL NVYA L+A+V+ CA   A+ +WL         ++G   LL T+     ++WL  +    N  KR  IL++     G +L  L+ + L +DPSILVT+ L TTTVF+CF+G+A+FA RRSYLYLGGLLSS LSV+++ +L N F R   + +  LYGGL VFC YV+FDTQ+ +E+A+LGD+D   H+ +LF+DFVGIFVRI +IL++NK K+      S
Sbjct:   18 DLQAMLKTSGISYDVQQHLVNVYAMLSASVVCCALSCASVIWLSPSPLFVAENIGWLSLLNTLMMTAGIVWLHMEPVY-NKAKRFMILMMISATMGITLSALVAITLEIDPSILVTAFLITTTVFLCFSGSAMFATRRSYLYLGGLLSSALSVMVLMNLFNYFFRSVMIDNALLYGGLVVFCAYVMFDTQMIIERASLGDKDAIKHSLDLFLDFVGIFVRIVVILLKNKQKKDEEDKRS 255
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIH1_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.460e-56
Identity = 117/236 (49.58%), Postives = 150/236 (63.56%), Query Frame = 2 
Query:  107 NVSALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWLHVGG--------LLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGSRSNSS 790
            ++  +  A+ I  DVQ+HLA VY+ L   VLT A  A A L L  G         LL  +   G  +WL  +    N+ KRVGILL      G SL  L+D+ L VDP+I++T+ L TT VFVCF G+A+ A RRSYLYLG +LSS LS + + + LN+F R   L S  LYGGL +FCGYV+FDTQ+ +EKAT+GDRD   HA ELF+DFV IFVRI IIL++N  K+   S+SS
Sbjct:   21 DLKTMFNASGIPADVQQHLARVYSTLTCCVLTAALAAGACLALGGGASDGSSWLPLLCFLGSTGGSVWLQLEPTY-NHTKRVGILLAVAATTGVSLAALVDLALAVDPTIVITAFLMTTLVFVCFTGSAMLATRRSYLYLGAILSSALSTMALLNFLNIFFRSTMLYSANLYGGLVIFCGYVVFDTQMIIEKATMGDRDVLRHALELFLDFVSIFVRIMIILIKNAAKKERASSSS 255
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZSQ4_9STRA)

HSP 1 Score: 202 bits (515), Expect = 3.720e-56
Identity = 116/247 (46.96%), Postives = 158/247 (63.97%), Query Frame = 2 
Query:   86 NMFGREI-------NVSALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADL------WLHVGGLLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRN-KDKEGSRSN 784
            NMFG  +       N++ ++K + IT DVQ+HL  VYA LAA VLT    A   L      W  +G  + +  G    +WL  +    NY +R GIL++     G S+  L+ + +HVDPSILVT+LL TT VF+CF G+AL A RRSYLYLGG+LSS LS+L++ S+LN+F    FL ++ LYGGL VFCGYV+FDTQ+ +EKA++GD+D   H   LF+D + IFVRI I L++N K  +  R+N
Sbjct:    2 NMFGTRVAPATSSWNMATMMKTSGITEDVQQHLVRVYATLAACVLTAMLSAGCTLAFGPERWSFMGSSVVSTMG---SLWLYMEPV-ANYQRRFGILMMISAAMGLSVSTLVAVAVHVDPSILVTALLLTTLVFLCFTGSALIATRRSYLYLGGILSSALSLLLLTSVLNIFTHSSFLFNMNLYGGLFVFCGYVVFDTQMIIEKASMGDKDVLAHTLGLFMDLMSIFVRILIALLKNNKGGKSPRNN 244
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BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Match: Probable (Bax inhibitor 1 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DV52_9ASCI)

HSP 1 Score: 201 bits (510), Expect = 1.430e-55
Identity = 105/242 (43.39%), Postives = 161/242 (66.53%), Query Frame = 2 
Query:   80 LGNMFG-REINVSALLKANDITLDVQRHLANVYAALAATVLTCAFGAAADLWLHV------GGLLTTVAGLGAMMWLAA-DQDKTNYPKRVGILLLFGLLKGFSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLLSSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGSRS 781
            + ++FG R I+++AL   + +T   + HL NVY  L  T+L+ + GA    +LH+      GGLL+T+  +G M+WLAA    K N  KRVGIL  FG   G  LGP++D  + ++P I+VT+ +AT+ +FVCF+ +AL+A+RRSYLYLGG L S L+++++ S+LN+F +   L    LY G+A+FC +V++DTQL VE+   GD D+ WH+ +LF+DF+ IF R+ IIL  N++K   ++
Sbjct:    1 MDSLFGNRRISMAALTDFSQLTTSTKNHLRNVYTCLTLTMLSASAGA----FLHLKGGFIQGGLLSTLVAIGLMVWLAATSHTKENQTKRVGILAAFGGAMGLGLGPVLDFAIQINPQIIVTAFIATSIIFVCFSVSALYAQRRSYLYLGGFLGSALTIMLVTSILNMFFKSFALFQFHLYAGVAIFCAFVLYDTQLIVERHMNGDNDYIWHSVDLFLDFINIFRRLIIILGLNENKNKKKN 238
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig925.17307.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative1.730e-15393.94BAX inhibitor n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
Bax2.120e-5849.34inhibitor-like protein n=1 Tax=Achlya hypogyna Tax... [more]
Uncharacterized1.620e-5748.99protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
BAX2.050e-5748.25inhibitor (Fragment) n=2 Tax=Hirondellea gigas Tax... [more]
Bax2.880e-5747.93inhibitor-like protein n=1 Tax=Pythium insidiosum ... [more]
Inhibitor8.450e-5749.08of apoptosis-promoting Bax1-domain-containing prot... [more]
Uncharacterized1.380e-5647.28protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized1.460e-5649.58protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Uncharacterized3.720e-5646.96protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]
Probable1.430e-5543.39Bax inhibitor 1 n=1 Tax=Phallusia mammillata TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig925contigE_fasciculatus_S2_contig925:2480..9004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score456.4
Seed ortholog evalue8.8e-126
Seed eggNOG ortholog2880.D8LM79
Preferred nameBI-1
Model size2431
KEGG koko:K21889
KEGG TC1.A.14.1.1,1.A.14.1.2,1.A.14.1.3,1.A.14.1.4
Hectar predicted targeting categoryother localisation
GOsGO:0000038,GO:0001101,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0006082,GO:0006629,GO:0006631,GO:0006950,GO:0006983,GO:0006984,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009414,GO:0009415,GO:0009607,GO:0009628,GO:0009987,GO:0010035,GO:0010941,GO:0012505,GO:0019752,GO:0023052,GO:0031967,GO:0031975,GO:0032787,GO:0033554,GO:0034976,GO:0042221,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060548,GO:0065007,GO:0071216,GO:0071704,GO:1901700
Exons9
EggNOG free text desc.endoribonuclease inhibitor activity
EggNOG OGsKOG1629@1,KOG1629@2759
Ec32 ortholog descriptionBax inhibitor 1-related
Ec32 orthologEc-01_005760.1
Cds size795
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig925.17307.1prot_E_fasciculatus_S2_contig925.17307.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig925 4088..8940 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842575.0770009-UTR-E_fasciculatus_S2_contig925:2479..27321696842575.0770009-UTR-E_fasciculatus_S2_contig925:2479..2732Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig925 2480..2732 -
1696842575.0922515-UTR-E_fasciculatus_S2_contig925:2745..36241696842575.0922515-UTR-E_fasciculatus_S2_contig925:2745..3624Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig925 2746..3624 -
1696842575.106834-UTR-E_fasciculatus_S2_contig925:3638..37141696842575.106834-UTR-E_fasciculatus_S2_contig925:3638..3714Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig925 3639..3714 -
1696842575.1208959-UTR-E_fasciculatus_S2_contig925:3723..40871696842575.1208959-UTR-E_fasciculatus_S2_contig925:3723..4087Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig925 3724..4087 -
1696842575.2042964-UTR-E_fasciculatus_S2_contig925:8940..90041696842575.2042964-UTR-E_fasciculatus_S2_contig925:8940..9004Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig925 8941..9004 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842575.1327348-CDS-E_fasciculatus_S2_contig925:4087..43251696842575.1327348-CDS-E_fasciculatus_S2_contig925:4087..4325Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig925 4088..4325 -
1696842575.1464078-CDS-E_fasciculatus_S2_contig925:4977..50681696842575.1464078-CDS-E_fasciculatus_S2_contig925:4977..5068Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig925 4978..5068 -
1696842575.1575248-CDS-E_fasciculatus_S2_contig925:5696..58681696842575.1575248-CDS-E_fasciculatus_S2_contig925:5696..5868Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig925 5697..5868 -
1696842575.1687899-CDS-E_fasciculatus_S2_contig925:6548..66401696842575.1687899-CDS-E_fasciculatus_S2_contig925:6548..6640Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig925 6549..6640 -
1696842575.181136-CDS-E_fasciculatus_S2_contig925:7188..73061696842575.181136-CDS-E_fasciculatus_S2_contig925:7188..7306Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig925 7189..7306 -
1696842575.1929324-CDS-E_fasciculatus_S2_contig925:8856..89401696842575.1929324-CDS-E_fasciculatus_S2_contig925:8856..8940Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig925 8857..8940 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig925.17307.1

>prot_E_fasciculatus_S2_contig925.17307.1 ID=prot_E_fasciculatus_S2_contig925.17307.1|Name=mRNA_E_fasciculatus_S2_contig925.17307.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=265bp
MASSPLGNMFGREINVSALLKANDITLDVQRHLANVYAALAATVLTCAFG
AAADLWLHVGGLLTTVAGLGAMMWLAADQDKTNYPKRVGILLLFGLLKGF
SLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGAALFAKRRSYLYLGGLL
SSVLSVLMIASLLNLFMRVEFLMSIQLYGGLAVFCGYVIFDTQLTVEKAT
LGDRDFAWHAAELFIDFVGIFVRICIILMRNKDKEGSRSNSSSRRSSSSY
NYSSGSRTGRTTRR*
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mRNA from alignment at E_fasciculatus_S2_contig925:2480..9004-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig925.17307.1 ID=mRNA_E_fasciculatus_S2_contig925.17307.1|Name=mRNA_E_fasciculatus_S2_contig925.17307.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6525bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig925:2480..9004- (Ectocarpus fasciculatus EfasUO2)
GCCACCTACCTGCCTTTGCCTGTGTTGCTCTGTGACGTGCGCTGCGCTTA
TACCAGACTGCGCGATGGCTTCCTCTCCGCTGGGAAACATGTTCGGCCGG
GAGATCAACGTCAGTGCTTTGCTGAAGGCGAACGACATTACGCTGGACGT
GAGTTGAACCTGTGCGGCGTGGTATCATTTCTGCTTTTCCGCAAGAACGT
CGGTCGGTTCTGTCTGGTGGTTCGACTGCTGCTGCTGTGCTATGTTTCAT
GGAGAGAGTTCTCTGCGTGGCACCGCGGTGGCGGTGAGGACAAAGCAGTC
GCTCTTACATACCATTGGTGCCAGGTGTATGGAAGTATGTCGATTCCCCC
GTTTGCTAGGAGTGACATGGACGTGCGACGCTTCTGGGTGGACAATCGAA
AATCACTGCTCTTCTCTTGTTGTTGCTCTTCAGGTATGTATGTGCTGCGG
AGGGATTTTGGCCTGCGTGGAGCGGCTTCCCATCTAGCTATTCCCATCTC
ATTCGTGTGTGCGCACGTGCTGTGTTGTGCCCCGGCCCTCAAGAGCTGGT
AGCGATGCCCGTGTTTTGCTGCAGTTGTGGTGTGTGTTACCATGCTGTCG
TGGAACCCACATCAATACATTATTTTATTTAGAAACACAGCAGTGGTGTG
CCTGAAAGTGTCTACGCGCTTCAACCACCCGATCGATGGACCAGCAGTCT
AGCGTCTAGACTAGCGCGATACGGCATGCTTGTGATAGACCACCTGCACA
CACAACAGCGATGTGCACGTTATCGATACAACAATGTTTGCTGCAGATGC
TGTGTGGACAGAGCTACAAAACTCGATAACAGCAGTAAATGATGCCATGT
CACATCCTACAGGGTTTCGTAGCATGAAGCCTTGCCAATCAACTACTACA
GAGGAGCGAAAGCGTACAAAACAACCATGCTGTTCGTGAGGCCAATTTGG
CCCATGCTACGTGCTACATTGGCCGCCCAGACTATCGTAGAACTGAGTAT
GGATTGCAGTGCGGAAGGCGAACTTTCAGAGTGTCCGAAATATTGCGGAT
CCTCTGCATTACTGCGGTTGACTGCTCAAGTTGTATACCAACAAACCTTT
AAACTTCTGGTGAAAATGTGCCGTACTTTGCAGAGCCTGCGTCCCTGCCC
GGGGGAGCTGTAAATGTTAGATGTGCATGTGGCGGGCAGAGTCCAGCATC
AAATGCCCTATACGGCCGCAGATGGGCGTTCTGTACAAAATGCATTGACC
ATGGCCGGGTGACAGGTGTAGAGATGACGTACATCTGTTTATCCACTACA
ACAGCAGTAACTATTGCACGTTCTTCTACATGTAGGAGACTGTGGGACTT
TCTTGCTGGCGGTTGGGCAGCAACGAAAAAAACGCACTCTAGATTCGGCC
TAAACCCACAACGTCACGTCACCCCGTCCGTCGTGCCAACTATTAACTCT
TGTGGAGGCAACGAGGGCGGCGCAAGCCCCCGAGGTCGGTTTTCGAACAT
TACCTCAAGGAACGTCCCACGACGTCCTCGAACGGTCCCCGCAGCGTTTC
TGACGTTGAAGGGCCCTCTGCCACAATGTTGTGCACATTTTGAAGAACTA
CCAGAGGGCATCATACATATGCATACAGCACTTGGTTCCTCCTCACGGCG
GCCGCGTCATTCCCCGCTGCCGCCGCATCCTGCTCCAACACGCAACAGGT
GCAACGGCATCTGGCGAACGTCTACGCTGCCCTGGCCGCGACCGTCCTGA
CCTGTGCGTTCGGCGCTGCGGCGGATCTATGGCTGCATGTGGGAGGGCTG
CTGACCACGGTCGCAGGTAAGTGGAGGTAAGAGGCTTTTCTCGCCCTGGG
AACTGCTGTTCGAGGTTTGCTGCTAGATGGGCCTGCGGGCGTAAGGAATA
TGCACGTCAGGGGTGCCCCATTCCTTCTCCTCCTGTCAAAGCCATGCTTT
ACAACGGCTTGATGCCCGGGTGACGTCTAGGACGAGCTCGTTAGACAGAG
CTCTTACCACCCGTGGAAAAGCCTATAACCACCAGTATTCTACGAGGCGG
GTGTACTCATGAGGAATACTGGTGGTTATAGGCTTTTCCACGGGTGGTAA
GAGCTCTGTCTAACGAGCTCGTCCTAGACGTCACCCGGGCATCAAGCCGT
TGTAAAGCGTGGCTTTGACAGGAGGAGAAGGAATGGGGCACCCCTGACGT
GCATATTCCTTACGCCCGCAGGCCTATTGAGCAAGCCTCCAAACGGTAGT
TACGCCATCGCCTAAACCACGAAAGTCTTCGTCCATTTTTGATTCTTCAC
CAGACAACATCGCCCCCCCCGATCCCCGCCCACCCCTCCCGCCGCTCTCC
CACCGCTTTGGAAGGCCTCGGCGCGATGATGTGGCTCGCGGCTGACCAGG
ACAAGACCAACTACCCCAAGAGGGTTGGCATTTTGCTTCTCTTTGGCCTC
CTGAAGGTGCTGCTGTTTTTTTTCTTTCTTTTTCCCACCTCATAGTGGTA
GCTTGTCAACCCTCGTGGTCGCTTGTAAACAAGTGCGTTGAATGGATTCG
TACCTACCTTCGAAGTTGTTGGCTATCACATGAAATCGTTGGCTTTTGTG
TGAATCGCCAAGACTCCCAAAGACGATGGTGACGAACTGGAAGTTGTTCC
GAGGGATGTGGTTCAGCACATACACATATCGGGTTGTTTTCACTTAAACG
GTATTTCAAAGCACCGCCGAGCTTGGTCGGCAGCATCGGCAACGGTGGTG
TCATCGACAGCATCAGCATCATCTTTAGCACTAGCGCATAAACATGCACA
AGCACAAGCAGGAAGTGATCAAATTGTGCATGTTTACTGCTCACCGCTCA
CGTAGCCTCGATGCTTTCGCGACTGCACGTAACCTTGCGAAAATGCATAT
TAATTGTATCTCCGGTTGACTTCGCGCTGCGCAAAACGAGTAGCCCGCTC
TCGTGCTCACTCAAGACGCCTAGATTTTCATTTCAGCCCCTAGGTTTCGG
AACCGCTTCCGTGTGGGTCGGTTCTCTCCAACCCCCTCCCTCTCCCCTGC
GCCGATGAGTGCATCCGCTCTAGCTCAACTCTTCGCCACACCGATGTTAC
TCGTTCTGTTTGCTGTTTTTTGTTGTTTGGCTCCAGGGCTTTTCGCTGGG
GCCGCTGATCGACATGGTGCTGCACGTGGACCCGTCGATTCTGGTGACCT
CTCTGCTGGCCACCACGACCGTGTTTGTGTGCTTTGCGGGCGCGGCCCTC
TTCGCCAAGCGGCGGAGCTACCTCTACCTCGGCGGCTTGCTTTCCAGCGT
CCTGAGCGGTGAGTGTGTCCTTGTCCTTGTCCTTGTCCTTGTCGCTGTCG
TTGTCGTTGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCTGTG
TCCTGAACGTCGTTTCTAGTGGCCCTGTAGTTTGCCCGCCGGCCTCGTCT
GCTCTCAGCTCTCCTCTTGCTTTTGCTTTTTGTGCCTTTGAGGTTTACCT
ACTTGATTGTCGATGTCAATGTTCTACCTGCCTGGCTTTCTTTTTCTAGT
CCCCTAACGGTTGGGCCCGGCTGTTAGCGCTTTGTGTGAGATGCAGTAGA
CCAACCTCACGCATCGGGTTTGGTTTCACCTCTCGCGTGTGGCCCATTTC
TTCCGAACAGATAAGACATACGGTGAAGCGAGACTTGCCCTTCAGCGCGA
CAAAATCATGCAATAGACGTTTCCCTGCCACTGTCTCTCTCGCTGTCCTG
CGCACGTCCTCCTCGTACGTTTGACACATGTAGTGTTTTTACGTCTTGCG
GCTTGTGCGGTTCCTGTTCGCACTCCCACCCGTTGCCCGGCCGCTGCAGG
CGGTGTCCCGCCCGGCCCCCGACACTCACTCATTTTCGCACTCTCCCGCG
ACTGTCTTGTCTCTGTCTGTCTGTCCTTTTTGTCAGTGCTGATGATCGCG
TCTCTGCTCAACCTCTTCATGCGCGTGGAGTTCCTCATGAGCATCCAGCT
CTATGGCGGCCTCGCTGTCTTTTGCGGGTGAGCCAGCCCCCCCAAGTGTA
CGTACCCTTGCGCAGGGCCCCGCCCGGTTCCAGAGCGGGACGTGCGACGT
GCTAGCGGCCCGTGGTCTATTGCAGATCACGCGTGCTTCACCTGACCATG
CCTATCAAACCCCCCCGCCCCCCCCTCCAGCCGCAACCAGTTACTGTTAA
AGCCGAGCCCCTTTTTGACTCATGCGTTCCCGGCCGATGGCATTCCTTGC
TCTGGGGTCTCAAGCAAATCGCCTGCTGGCAACTACTCGCTTGAGTGCCA
TGGGCGATTCTATACGGCGTTGAGGGAAGGGCCATCTCAACTAGGACCCT
CCGGGTCGAATAAGACGCCTAATACGTCTCGATGCTGCACAGCGGAGGAT
GTATTGTGTAGTCTTTCGTTTTTGACAGGGTCGACACACTCTCGTCGAAT
TTGACGATTCTTCCGCGCAGCACTCTCATCATGCGACCTCCCGCCCTTCC
CCCCCCCCCCTTCTTTTGGAGGGGTGCCCGATGCCTGTGTGCCGAATGTA
GTCCTTGTCGCTCCCCGTACTGTTGCAAAAACTTGGGGAATCTTTGTGAC
GCCAATCGCCCTCCCCCCGTGTACCTGCCTGCGCGGTGCGTATTACCCCC
CCCTCCCCCCGCCCCCGCCCCCGATCAAGTTACGTGATCTTCGACACCCA
GCTGACTGTGGAAAAGGCTACCCTCGGAGACAGGGACTTCGCGTGGCACG
CGGCCGAACTGTTCATCGACTTCGTGGGCATTTTCGTGCGCATCTGCATC
ATCCTGATGCGCAACAAGGACAAGGAGGGAAGCCGAAGCAACAGCAGCAG
CAGGCGCAGCAGCAGCAGCTACAACTACAGCAGTGGGAGCCGCACTGGGC
GCACGACCCGCCGTTGATTGGTTTCACGGAGTAACCAATGCGTCCCCGTC
GGGTGCTCCTTGCCCCCCCCCCCTAAAAAACGTGCCGGCTCGCTCTTGAG
TGTAATTATCCTTCCTTGAGGTGTTGGGTTTTCAGGGTGGCCGGCGTATT
CCCGCGGTGACACGTCTGTCCGTCTGCAGTAGTACAATAGTGTGTGTGGG
AGGGGCGGTGACGGCGAGTGGCAAGGCGGTGACGTGACGGCCACGATGGC
CGTGTTGCCTGTGTGCGTCTCTTTGTGTCCTGTGGGCTTGGTCGCTGATC
TGACGGCATCCTCGCCAACGCCGCTCGCTCGGTGTTGTCCTGCCACTCGC
TTTTTTCCTTAAACGAGCCCCTCCACCACGAGTGAGTGAGGTTTGTTTCG
ATTTCGTCGTCGTTGGCCGTCTTTGCTTTCGAAGTGAGCGTGTGTGCTGC
TTGATCACTCTGCCCTTGTCAAAGCATGCACGTCGAATGCGGGGCGTGCT
GCTGTTGCTATTGCTGTTGGTGCGGCCATGAGCGCATTTGCTCAGAACAG
TTGGGTTTTGTTGAGGCTGCCCGCGTTGAACGTACCATAGATACATGCAC
AGGGATGGCGAGTATTCGGTAGCGATTGCCTATCTGTTCTGTGAGAAAGG
AAAGTTCGGCGATATTTTGCATTGTGTTTCGGTCCCCGTCAAGTCTACAG
GCAGTAGTACGAATTCAATACAGTACGAGTTCGTCTGCGAAAAGGGCGTT
AGTCGACATCATACAAGCCACTTTTTGGGAGTGGGGCGTCCACTAACAAG
AGAGGTGATAACGAGGACGCGCCACTTTTGTGTGTGTGTTTGCGTGCTGG
CACCCGAGGAACGCAAGAGATTTCCGCCTTTCTTTGATTTGAAAGTCCAC
GAGTGGACAGACATTAGACGGGTCTCCAGAGACGACGAGTGTTCAGTTGT
TATGTTCGTTCAGAGGAGGAGTGGTTGAGGGAGCGTTAGCGTTGAAGACG
GGCGGGCTGGTGTTTGTTTGTGTGTGGCAGCGAGCAGCGGTGAGGGGCGA
ATAAACAACGCGGTGCAAGGAACCTGCAGCTCTTGTGCACCGCGGCGCTG
CGCCGCTCTTCCTTACGCAAAGATCGGCAGCTTGTAGGTGTGATCCTAAA
ACCAAAATAACAAACTAACATAACAAACGCGCTTTCATTGAGCATCGGAG
TGTGGCATCCGCGCAATTCCTACAGGGTGGGCTGTGTGACATTTTGTGTC
TACAGTAGGGCTGTATTTCGACAGCCTGTTGAGTTGTCAGCAGGAATGGA
AGGGTACTTGCAGGGAAGGAGATGATCGCGCACACTTTCCTTCCGCGTTT
ACGCGGATGGTGAAAAAACGAGAGCGGTAGACTGCATCCGCTGAGATTTT
TTTTTGTGCTGCTGGCTGCTTCAAGCGAAGAGTAGGGCCGTGTTGCTGAC
AAAGGAGCGTTTTTAGCGCAACTGCTTTCGTCTACACGTCAATGATACGT
TCGCTTGGAATTCCCCAAATCAGAGAGTAAAAGGGGGAGAAACTGCTCTC
TGCTGGACGCGACACTGTCATGACCGTCCCTGACAAGTGAACAAAACTTT
TTGACACAATTGACACAAAGGCATA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig925:2480..9004-

>mRNA_E_fasciculatus_S2_contig925.17307.1 ID=mRNA_E_fasciculatus_S2_contig925.17307.1|Name=mRNA_E_fasciculatus_S2_contig925.17307.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=795bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig925:2480..9004- (Ectocarpus fasciculatus EfasUO2)
ATGGCTTCCTCTCCGCTGGGAAACATGTTCGGCCGGGAGATCAACGTCAG
TGCTTTGCTGAAGGCGAACGACATTACGCTGGACGTGCAACGGCATCTGG
CGAACGTCTACGCTGCCCTGGCCGCGACCGTCCTGACCTGTGCGTTCGGC
GCTGCGGCGGATCTATGGCTGCATGTGGGAGGGCTGCTGACCACGGTCGC
AGGCCTCGGCGCGATGATGTGGCTCGCGGCTGACCAGGACAAGACCAACT
ACCCCAAGAGGGTTGGCATTTTGCTTCTCTTTGGCCTCCTGAAGGGCTTT
TCGCTGGGGCCGCTGATCGACATGGTGCTGCACGTGGACCCGTCGATTCT
GGTGACCTCTCTGCTGGCCACCACGACCGTGTTTGTGTGCTTTGCGGGCG
CGGCCCTCTTCGCCAAGCGGCGGAGCTACCTCTACCTCGGCGGCTTGCTT
TCCAGCGTCCTGAGCGTGCTGATGATCGCGTCTCTGCTCAACCTCTTCAT
GCGCGTGGAGTTCCTCATGAGCATCCAGCTCTATGGCGGCCTCGCTGTCT
TTTGCGGTTACGTGATCTTCGACACCCAGCTGACTGTGGAAAAGGCTACC
CTCGGAGACAGGGACTTCGCGTGGCACGCGGCCGAACTGTTCATCGACTT
CGTGGGCATTTTCGTGCGCATCTGCATCATCCTGATGCGCAACAAGGACA
AGGAGGGAAGCCGAAGCAACAGCAGCAGCAGGCGCAGCAGCAGCAGCTAC
AACTACAGCAGTGGGAGCCGCACTGGGCGCACGACCCGCCGTTGA
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