|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9242.17302.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G379_ECTSI) HSP 1 Score: 1211 bits (3133), Expect = 0.000e+0 Identity = 713/940 (75.85%), Postives = 747/940 (79.47%), Query Frame = 1
Query: 1 SSLCSVVAVEAREAEGIGAAVVVNLVNGEFGERASAQAMHMLDELTTADDTVVTGRGCIQVPPSFAEAMARHGLADPRKRPLVATRLAAALAVVLGGGDGIARGGVGAVVSAVTLSAPSSPLFSTVLLRGTARICSSPDSAXXXXXXXXXXXXXXXXXRVIASSCTALHGLLRSDGKAKNVSLSAXXXXXXXXXXXXHALSPTLEAFVEVCRAAEGTPASPAT----AAPSSRDGGAAASGYYCGHARLRAGQSEEDASSRREARHAVSSLLDFVDGLLEDETKEGFHPAAQDRFQAGGGVLSSPAPRRHRSPTITPSLLAKSAAARRMWVEVRGLCGGEANARAAASQRLASLLKEAAIPEDERGIKQGGVAPFPFLYLDDPLHRPPSATPIASTVANNGARGKPGETEGAPSEGQTLSFSAEHVRNLADVAGAPSLEGSLRRAAAEQLRGVLVSPGVAAVVLSETGDEDLCKRVLSAALSGLLPRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGFPSAAAASPGTVVAGGRNGRSGFGEHLWDEAFLGLLLAAVRQFAPVRRYLLAACSGCDRVGWSRTAEPELAVVTPSAGSPPPGHLSPSRKGAAAXXXAVVAPNAVPAVLRRLYHPRPSVRRLAGSVAVRLAFDSPSFFSPLDCTLESPPCSGAGQDSDHAGDGGGRCRVGGVASLGEGFLVPKMVLEAFPRLVELTREGTSGGGVGSENRGSASTSRRDDKNSNSPSRRR---HEAFQTLVASEWALLLLVLDTAHDGPAHHPGVAAATDSSC----KSLSERQHRSAVAAQVAEALREAGRRADFEAAMLKARAWALAGFGYSEAFFGPDGGWETALERFLRAPPNGTKDRAAMRDVTSLLVAGTDHMCPRGFQVLADAAEECFVPILSETNRRPNTVLGDYLGDWRAPSSSKGSARDLE 2787
SS S VE REAEGIG AVVV LV+GEFGERASAQAMHMLDELT ADDTV G GCIQVPPSFAEAMARHGLADPRKRPL ATRLAAALAVVLGGG+G+A VGAV SAVT SAPSSPLFS VLLRGTA SP +A XXXXXXXXXXXXXX RVIA SCTALHG+LRSDGKAKNVSL+A X ALSPTLEAF+EVCRAAE T ASP T AAP+ D GAAA+G +CGHARL AGQSEE ASS REAR AVSSLLDFVDGLLEDETK+G HPAAQ +FQAG GVLSSP RRHRSPT PSL+ KSAAARRMWVEVRGLCGGEANARAAAS+RLA LLKE IPEDERG+KQGG PFPFLYLDDPLH PPSATPIASTVANNGA GKP +E APSEGQTLSFSAEHVRNLADVAGAPSLEG LRRAAAEQLRGVLVSPGVAAVVLS+TG+EDLC+RVLSAALSGLLPRP PG PSAAAASPGTVV GGR+GRSG GEHLWDEAFLGLLLAAV +FAP+RRYLLAACSG + G SRTAEPELA+ AGSP GHLS SRKGA A A+V PNA+P+VLRRLYHPRPSVRRLAGSVAVRLAFDSPSFFSPL+CTLESPP S G+DSD+ GRCRVGGVASLGEGF VP MVLEAFPRL ELTRE TS HEAF TLVASEW L+L+ DTA DGPAH PGVAAA K ER HRSAVA+QVAEALREAGRR +FEAAMLKARAW LAGFG SEA FGPDGGWETA ERFLRAPPNGTKDRAAMRDVTSLLVAGTDHMCPR FQVLADAAEECFVPILSETNRRP TVLGDYLGDWRAPSSSKGSARDLE
Sbjct: 892 SSSGSTSPVEPREAEGIGGAVVVKLVHGEFGERASAQAMHMLDELTAADDTVAAGSGCIQVPPSFAEAMARHGLADPRKRPLTATRLAAALAVVLGGGNGVAGDRVGAVASAVTRSAPSSPLFSAVLLRGTAT-SGSPGNAGXXXXXXXXXXXXXXR-RVIARSCTALHGVLRSDGKAKNVSLTAAATAAXATA---RALSPTLEAFIEVCRAAERTAASPTTPSTAAAPAWPDEGAAANGCFCGHARLPAGQSEERASSWREARRAVSSLLDFVDGLLEDETKQGLHPAAQGQFQAGDGVLSSPPLRRHRSPTTNPSLV-KSAAARRMWVEVRGLCGGEANARAAASRRLAGLLKETTIPEDERGVKQGGAVPFPFLYLDDPLHLPPSATPIASTVANNGASGKPAASERAPSEGQTLSFSAEHVRNLADVAGAPSLEGGLRRAAAEQLRGVLVSPGVAAVVLSDTGEEDLCERVLSAALSGLLPRPQPPSSPIPSGSDGDRSEDPWPSPRPPCPLPGIPSAAAASPGTVVTGGRSGRSGVGEHLWDEAFLGLLLAAVGEFAPIRRYLLAACSGRESGGCSRTAEPELALA---AGSPALGHLSRSRKGATAA--AIVPPNALPSVLRRLYHPRPSVRRLAGSVAVRLAFDSPSFFSPLECTLESPPSSRVGRDSDNERGRCGRCRVGGVASLGEGFSVPMMVLEAFPRLAELTRERTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEAFHTLVASEWTLVLIP-DTAADGPAHRPGVAAAATXXXXXXXKKSGERHHRSAVASQVAEALREAGRRTEFEAAMLKARAWMLAGFGCSEALFGPDGGWETAFERFLRAPPNGTKDRAAMRDVTSLLVAGTDHMCPRSFQVLADAAEECFVPILSETNRRPTTVLGDYLGDWRAPSSSKGSARDLE 1819
BLAST of mRNA_E_fasciculatus_S2_contig9242.17302.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL0_9PHAE) HSP 1 Score: 1083 bits (2802), Expect = 0.000e+0 Identity = 652/882 (73.92%), Postives = 689/882 (78.12%), Query Frame = 1
Query: 205 MARHGLADPRKRPLVATRLAAALAVVLGGGDGIARGGVGAVVSAVTLSAPSSPLFSTVLLRGTARICSSPDSAXXXXXXXXXXXXXXXXXRV--------------IASSCTALHGLLRSDGKA-KNVSLSAXXXXXXXXXXXXHALSPTLEAFVEVCRAAEGTPASPATAAPSSRDGGAAASGYYCGHARLRAGQSEEDASSRREARHAVSSLLDFVDGLLEDETKEGFHPAAQDRFQAGGGVLSSPAPRRHRSPTITPSLLAKSAAARRMWVEVRGLCGGEANARAAASQRLASLLKEAAIPEDERGIKQGGVAPFPFLYLDDPLHRPPSATPIASTVANNGARGKPGETEGAPSEGQTLSFSAEHVRNLADVAGAPSLEGSLRRAAAEQLRGVLVSPGVAAVVLSETGDEDLCKRVLSAALSGLLPRPPXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PGFPSAAAASPGTVVAGGRNGRSGFGEHLWDEAFLGLLLAAVRQFAPVRRYLLAACSGCDRVGWSRTAEPELAVVTPSAGSPPPGHLSPSRKGAAAXXXAVVAPNAVPAVLRRLYHPRPSVRRLAGSVAVRLAFDSPSFFSPLDCTLESPPCSGAGQDSDHAGDGGGRCRVGGVASLGEGFLVPKMVLEAFPRLVELTREGTSGGGVGSENRGSASTSRRDDKNSNSPSRRRH---EAFQTLVASEWALLLLVLDTAHDGPAHHPGVAAATDSSCKSLSERQHRSAVAAQVAEALREAGRRADFEAAMLKARAWALAGFGYSEAFFGPDGGWETALERFLRAPPNGTKDRAAMRDVTSLLVAGTDHMCPRGFQVLADAAEECFVPILSETNRRPNTVLGDYLGDWRAPSSSKGSARDLE 2787
MARHGL DPRKRPL A+RL AALAVVLGGGDG+A G GA SA T S PSSPLFS VLLRGT + S P XXXXXXXXXXXXXXXXX IASSCTALHGLLRSDG KNVSL+A XX ALSPTLEAFVEVCRAAE ASPA AAP+ +D GAAA+GY+CGHARL AGQ+EEDA S REAR VSSLLDFVDGLL DETK+G HPAA R QAG GVLSSP RRH S T TPSL AKS AARRMW+EVRGLCGGEANAR AAS+RLA LLKEA IPEDERG+KQGGVAPFPF YLDDPLHRP SATPIA+TVAN+G GKP +GAPSEG+TLSFSAEHV+NLADVAGAPSLEG LRRAAAEQLRGVLVSPGVAAVVLS+TG EDLC+RVLSAALSGLLPR P XXXX PGFPS AAA PGTVVAGGR+GR+GFGEHLWDEAFLGLLLAAVR+FAPVRRYLLA+ SGC+ GWS TAE ELA+ AGSP PGHLS SRK A A AVVAPNA+PAVLRRLYHPRPSVRRLAGSVAVRLAFDSPSFFSPL+CT+ESPP S GQDSDH GGGRCRVGGVASLG GF VP MVLEAFPRL ELTREGTS GG GSEN S+ EAFQTLVASEW LL + DTA D P S K ER+HRSAVA+QVAEALREAGRR +FEAAML+ARAW LAGFGYSEA FGPDGGWE ALERFLRAPPNGTKDRAAMRDVTSLLVAGTDHMCPRGFQVLADAAEECFVPILSETNRRP TVLGDYLGDW+APSSSKGSARDL+
Sbjct: 1 MARHGLGDPRKRPLAASRLTAALAVVLGGGDGVAAGRGGAGASAATRSVPSSPLFSAVLLRGT--VTSGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIASSCTALHGLLRSDGLTPKNVSLTAAAAAXXA-----QALSPTLEAFVEVCRAAERAAASPAAAAPAGQDEGAAANGYHCGHARLPAGQNEEDACSWREARRVVSSLLDFVDGLLGDETKQGLHPAAHGRLQAGDGVLSSPPLRRHGSLTTTPSL-AKSGAARRMWMEVRGLCGGEANARVAASRRLAGLLKEATIPEDERGVKQGGVAPFPFRYLDDPLHRPSSATPIAATVANSGESGKPAAAKGAPSEGRTLSFSAEHVKNLADVAGAPSLEGGLRRAAAEQLRGVLVSPGVAAVVLSDTGQEDLCERVLSAALSGLLPRTPPXXXXSSPIPSRSDGDRSEDPWLSPPPPCPLPGFPSTAAA-PGTVVAGGRSGRNGFGEHLWDEAFLGLLLAAVREFAPVRRYLLASGSGCESGGWSGTAESELALA---AGSPAPGHLSRSRKRATAG--AVVAPNALPAVLRRLYHPRPSVRRLAGSVAVRLAFDSPSFFSPLECTVESPPSSRVGQDSDHERGGGGRCRVGGVASLGGGFSVPMMVLEAFPRLAELTREGTSSGGDGSENMEGDSSXXXXXXXXXXXXXXXXXXXEAFQTLVASEWTLL--IADTAADDP------------SSKKSGERRHRSAVASQVAEALREAGRRTEFEAAMLRARAWMLAGFGYSEALFGPDGGWEAALERFLRAPPNGTKDRAAMRDVTSLLVAGTDHMCPRGFQVLADAAEECFVPILSETNRRPTTVLGDYLGDWKAPSSSKGSARDLK 854
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 2787 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-03_004850.1 |
| Cds size | 2787 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842574.5669837-CDS-E_fasciculatus_S2_contig9242:555..672 | 1696842574.5669837-CDS-E_fasciculatus_S2_contig9242:555..672 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9242 556..672 - |
| 1696842574.5781689-CDS-E_fasciculatus_S2_contig9242:1248..1429 | 1696842574.5781689-CDS-E_fasciculatus_S2_contig9242:1248..1429 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9242 1249..1429 - |
| 1696842574.5949183-CDS-E_fasciculatus_S2_contig9242:1798..2889 | 1696842574.5949183-CDS-E_fasciculatus_S2_contig9242:1798..2889 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9242 1799..2889 - |
| 1696842574.6069396-CDS-E_fasciculatus_S2_contig9242:3161..3458 | 1696842574.6069396-CDS-E_fasciculatus_S2_contig9242:3161..3458 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9242 3162..3458 - |
| 1696842574.6186914-CDS-E_fasciculatus_S2_contig9242:3843..4478 | 1696842574.6186914-CDS-E_fasciculatus_S2_contig9242:3843..4478 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9242 3844..4478 - |
| 1696842574.6304371-CDS-E_fasciculatus_S2_contig9242:4511..4786 | 1696842574.6304371-CDS-E_fasciculatus_S2_contig9242:4511..4786 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9242 4512..4786 - |
| 1696842574.6433883-CDS-E_fasciculatus_S2_contig9242:5414..5506 | 1696842574.6433883-CDS-E_fasciculatus_S2_contig9242:5414..5506 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9242 5415..5506 - |
| 1696842574.6615279-CDS-E_fasciculatus_S2_contig9242:5903..6002 | 1696842574.6615279-CDS-E_fasciculatus_S2_contig9242:5903..6002 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig9242 5904..6002 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9242.17302.1 >prot_E_fasciculatus_S2_contig9242.17302.1 ID=prot_E_fasciculatus_S2_contig9242.17302.1|Name=mRNA_E_fasciculatus_S2_contig9242.17302.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=929bp
SSLCSVVAVEAREAEGIGAAVVVNLVNGEFGERASAQAMHMLDELTTADD
TVVTGRGCIQVPPSFAEAMARHGLADPRKRPLVATRLAAALAVVLGGGDG
IARGGVGAVVSAVTLSAPSSPLFSTVLLRGTARICSSPDSAAAAAAAAAS
PAAAATARRVIASSCTALHGLLRSDGKAKNVSLSAAAAAAAAAAAAAHAL
SPTLEAFVEVCRAAEGTPASPATAAPSSRDGGAAASGYYCGHARLRAGQS
EEDASSRREARHAVSSLLDFVDGLLEDETKEGFHPAAQDRFQAGGGVLSS
PAPRRHRSPTITPSLLAKSAAARRMWVEVRGLCGGEANARAAASQRLASL
LKEAAIPEDERGIKQGGVAPFPFLYLDDPLHRPPSATPIASTVANNGARG
KPGETEGAPSEGQTLSFSAEHVRNLADVAGAPSLEGSLRRAAAEQLRGVL
VSPGVAAVVLSETGDEDLCKRVLSAALSGLLPRPPPPSSPHPSRSDGDRS
EDPWPSPPPPCPLPGFPSAAAASPGTVVAGGRNGRSGFGEHLWDEAFLGL
LLAAVRQFAPVRRYLLAACSGCDRVGWSRTAEPELAVVTPSAGSPPPGHL
SPSRKGAAAAAAAVVAPNAVPAVLRRLYHPRPSVRRLAGSVAVRLAFDSP
SFFSPLDCTLESPPCSGAGQDSDHAGDGGGRCRVGGVASLGEGFLVPKMV
LEAFPRLVELTREGTSGGGVGSENRGSASTSRRDDKNSNSPSRRRHEAFQ
TLVASEWALLLLVLDTAHDGPAHHPGVAAATDSSCKSLSERQHRSAVAAQ
VAEALREAGRRADFEAAMLKARAWALAGFGYSEAFFGPDGGWETALERFL
RAPPNGTKDRAAMRDVTSLLVAGTDHMCPRGFQVLADAAEECFVPILSET
NRRPNTVLGDYLGDWRAPSSSKGSARDLE back to topmRNA from alignment at E_fasciculatus_S2_contig9242:556..6002- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig9242.17302.1 ID=mRNA_E_fasciculatus_S2_contig9242.17302.1|Name=mRNA_E_fasciculatus_S2_contig9242.17302.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5447bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9242:556..6002- (Ectocarpus fasciculatus EfasUO2)
TCTTCTCTGTGCTCGGTGGTGGCAGTCGAAGCTCGGGAGGCCGAGGGGAT
CGGTGCTGCGGTCGTTGTCAACCTGGTGAACGGGGAGTTCGGGGAACGGG
TGAGTTGTGAATTGTCAACGAACTATTCTCTCGTTGTCTCGTCCGGAGGG
GGCGTAGAACGCCATACGTTCCTGTGCACGCCAGTATCAACGCCGAGGTA
TTTCGCATGGGTTCGACGAAGGCAACAGTTTGTTTCGTCTACGCCCTCAA
CAAACCTGCTCTTTGTCGCAGTGGCTAGTCTCTGAGTGGCGAAATTCGTT
CGTTCGAGACGTTTCATTTGTTGGCGCTGCGTCCTCTTTCGCGAACCCCA
GAAACAACGTGCGCGCAATTATTGCTCGCTGTTTAGTAGCCGACGACGCA
GTCTCGATATCCGTCATGGAGAAACTCATGGAATGCCTGATGCACTCCGC
ACCCCTTGCCATGTCCGTTTGGCTAACTTCGGTTGCCGAACAATAGGCGA
GTGCCCAAGCGATGCACATGCTGGACGAGCTCACGACTGCAGATGACACA
GTGGTGACGGGAAGGGGCTGCATCCAGGTTCCACCCAGGTATGAGGTGCT
CTTGATAGTTTGCGGAACCATAGGACTGCGCGCCACACGTGGCAGCAGGC
TCGGGGATCGCAGCGCGCTTACGCAACGCCTTGACTTTCTCTCGTGCACG
TCATGCACGAGGCGACCATCTGCTAGTAACAATCGGAACCGCAAGCAGAG
GGGATACAGTAGTAGCGTTTACCCTTGCATTGGTCGTAGGCGGATAGGAC
AGCGTGAATGATTCGATTCGATCCGATGCGATATGGGGGGTGGAACTCAA
AGGAGGCTTGGAAGCAACACATGTCGTGTCTTGTCGTTTGGCATTGGGCC
GCGTCGTGACCATGTCTCCCGCACCTCTTCTCGGTCTCCCTCTAGCCTCC
TGTTACACTTTGTCTCCCCGGCCTTCTTCGGAAGGGCGCGTGTGCTACGT
TTAGTGTTTTTTTCGCGATTTCGCCGTCGGCGCGATTCTGGAGAAAGCCT
TTCAAACCGTCCCGTACGTCGCAACGTCGGGCCCCCCACCCCCCCTGCCC
GTTCGCCGCCTTCCCACCACACGACCTTCCCTGGTCTGTGCACCCGTTTT
TCGCCGCGCTTGTCTGAATCATGCAACACCGCCCCTCCCGACTCTCTCGC
CTAAAAATGATGCCAGCTTCGCCGAAGCCATGGCTCGACACGGTCTTGCA
GACCCTCGAAAGAGGCCCTTGGTGGCGACCCGCTTGGCGGCCGCGCTCGC
TGTTGTCCTCGGAGGAGGTGACGGCATCGCCAGAGGTGGTGTTGGAGCTG
TTGTCTCGGCGGTTACGCTGTCGGCCCCATCCTCGCCGTTGTTTTCGACT
GTTCTCCTTCGAGGAACGGCGAGGATATGTTCTTCCCCGGACAGTGCTGC
TGCTGCTGCTGCTGCTGCTGCTTCTCCTGCTGCGGCTGCTAGTTCAGCCG
CCGTTTCTTCTGCTGCCGCCTCAGCCGCTCGGCGGGTTATCGCCAGCAGC
TGCACGGCGCTACACGGGCTCCTGCGCTCCGACGGCAAAGCCAAGAACGT
CAGCCTTTCTGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCCGCCGCGC
ATGCTCTCTCGCCTACCCTCGAAGCGTTCGTCGAGGTCTGCCGTGCCGCC
GAGGGTACCCCAGCGTCACCGGCAACAGCAGCGCCGTCATCGCGGGATGG
AGGGGCGGCCGCCAGCGGCTACTACTGCGGACACGCACGCTTGCGGGCGG
GACAGAGCGAAGAAGACGCTAGTAGCCGGCGAGAGGCCCGCCACGCGGTG
TCCTCGCTGCTTGACTTTGTTGACGGGCTCCTAGAGGACGAGACCAAGGA
AGGCTTTCACCCAGCGGCCCAAGACCGATTCCAGGCCGGGGGTGGTGTGT
TGTCATCCCCTGCCCCCCGGCGCCATCGGTCACCCACAATCACCCCATCG
CTACTGGCCAAGAGTGCTGCTGCGAGGAGGATGTGGGTGGAGGTGCGGGG
GCTCTGCGGAGGAGAGGCGAACGCCAGGGCGGCGGCGTCGCAGCGGCTGG
CGAGTTTGCTGAAAGAGGCAGCGATTCCGGAGGACGAACGCGGCATCAAG
CAAGGAGGGGTGAGGTGTTTGGAAGCCGGCGGTGGCCTTTGTTCTCCGCG
TTTCGTTGTAACGGGGCATCGGCTCGTTCACCTTCGGTACCAGAACGTAG
ACCAGAGCTCGGTCGGGTTTCCTGCAGGTGTGCCTTTGTCCGCGGTACAG
GTTACGCATGCGACAGCAGTAGTTGCTCCTGGCCCGCGTGAACAGTTTTC
ATGAAACGCCCCCTATAGTTTTTTGTTGTACAATCCTATTTCCTTTCGTA
GCACAATGCCCTGTAACGGCTACAACCCCGGTCGCCTCACTGCACTACAA
ACCGCTCCCTCTGGGTCCAACAAGCCGTTGTTGCTCGTTGACGCCCAACC
CCCCCCTCTAACGACTACGGCATGCATTTTGACCCCGCCCTCAGGTTGCC
CCCTTCCCTTTCCTCTACCTGGACGACCCCCTTCACCGGCCGCCATCCGC
AACCCCTATCGCTTCGACGGTCGCAAATAACGGGGCAAGAGGTAAACCGG
GGGAGACAGAGGGGGCGCCGTCGGAAGGCCAGACGTTGTCGTTCTCGGCG
GAGCACGTAAGGAACCTGGCGGACGTGGCGGGGGCCCCGTCGCTGGAGGG
GAGTCTGCGGAGGGCGGCGGCTGAGCAGCTTCGGGGGGTGCTCGTGTCGC
CGGGCGTCGCTGCGGTGGTGCTTTCGGAAACTGGAGACGAGGTGTGAGAC
ACACCAAACTAGTGTTTTTGTTTGTCGCGTGGTGGATAGCTGGTCTTTGT
AGTGGATTCAGATGAAGGCGCCGTTTTTGTGCCGGTCGTATTTGGGGGTA
GATCCCGCTCCGACAACCCCGCGGCGAAGGCCTTGTCCTTAGCGGCATAA
GCACACCTTCTGACGGTCCGAAAATTTACTCGTTGTTTGCTCTCTCTCTC
CACGAGTGGTCCCCCCTTCCCTCAACACACCTCATCCCCCCCCCCCGGCT
CACGCAACCCTAGGACCTCTGCAAGAGAGTTCTCAGCGCCGCGTTGTCGG
GACTACTGCCGCGGCCGCCGCCGCCGTCGTCCCCGCACCCCTCCCGTTCC
GACGGCGACCGAAGCGAAGACCCGTGGCCGTCGCCGCCACCACCCTGTCC
GTTGCCGGGTTTCCCATCGGCGGCGGCGGCGTCGCCCGGCACAGTTGTTG
CCGGTGGCCGTAACGGCCGCAGCGGGTTCGGCGAGCACCTGTGGGATGAA
GCGTTTCTCGGGCTGTTGTTGGCGGCGGTGCGGCAGTTCGCCCCCGTCAG
ACGTTATTTGCTCGCAGCCTGTAGTGGCTGCGATAGGGTCGGCTGGTCTA
GGACGGCGGAGCCAGAGCTCGCGGTAGTGACGCCTTCGGCGGGATCTCCT
CCTCCGGGGCACCTGTCCCCTAGTCGGAAGGGAGCAGCAGCAGCAGCGGC
GGCCGTTGTCGCGCCGAACGCCGTACCGGCCGTCCTCCGGCGTCTGTACC
ACCCCCGGCCGTCGGTTCGGCGCTTGGCCGGCTCGGTCGCCGTCCGCCTG
GCCTTCGACTCCCCTTCCTTCTTCTCCCCCCTCGACTGTACTCTAGAGAG
CCCCCCCTGTTCGGGTGCGGGGCAGGATAGCGATCACGCGGGCGACGGTG
GCGGCCGCTGTCGTGTCGGCGGGGTCGCGAGCCTGGGAGAAGGGTTCTTG
GTCCCGAAGATGGTTCTCGAGGCGTTCCCTCGCCTGGTGGAGCTGACGAG
GGAAGGGACTAGCGGCGGTGGCGTTGGGAGTGAGAACAGGGGAAGCGCTT
CAACCTCCCGCCGTGATGACAAGAACAGCAACAGCCCCAGCAGACGCCGG
CACGAAGCCTTCCAGACCCTCGTCGCCAGCGAGTGGGCTCTCCTTCTTCT
TGTCCTAGACACCGCCCACGACGGCCCCGCCCACCACCCAGGGGTAGCCG
CCGCCACCGATTCCTCCTGTAAGAGTTTAAGCGAGAGGCAGCATCGCTCT
GCAGTCGCTGCGCAGGTAGCGGAGGCGTTGCGGGAGGCGGGGAGGCGTGC
GGATTTTGAGGCGGCGATGCTGAAGGCGCGGGCGTGGGCGCTGGCTGGCT
TCGGGTATGTACGGTGTTAGAGAAAGCCTGCACCCCGTTTGTTGTTGAAG
TTGATGCTGGTTCTCTTGAGGGTGTGACGGCGACAACGTTGTGACCGTTG
GGGGACAGAGGGGAGATTCACTCCCTTCTCTTCTGTCTACTGTGCAGTTT
GTTTGCCTTCTGGCCATGCGTACCTTCTGTCGTGGATTGCTGAACACGAG
GTAATGGCGCTGTTGTGTGTTGCCATTCTACCGCTGTCGCCGCTTTTGCA
GGCGGGCTCGGTTCTTTATTAATTCGGTCTTGTGCTTTTCTTTCCCCGAT
GTCTCTGCGCTTCACACTCTCGCTGCTCTCAACGGGCATGCCGCTGCGTT
ATCATCTCACCGGCGCCGCACAGCTACTCGGAAGCCTTCTTCGGGCCAGA
CGGCGGGTGGGAGACCGCCTTGGAGAGGTTCTTACGAGCCCCTCCCAACG
GCACGAAGGACAGGGCGGCAATGCGGGACGTTACCAGCCTTCTCGTCGCG
GGGACGGATCACATGTGTCCCCGGGGGTTCCAAGTTCTTGCGGACGCCGC
GGAGGTGAGATGTTCCACGGTTCGTCCGCACCACCTCTTTCTGCAGAGGT
TGGTTTTGTGCCGGGTGTCTTTGGGGATCTGGAACCGCCGCGAATATACA
CCCTCGAAGGGATGACGGACACTACCCTGCGCTGCCTTGGAGACGACGTG
TCGACGTGTGATGCCAGGGTTGTTGCGCATTCGATAGTACACGCACACCG
CTGTCACAACGGTGCCCTCACCGCACTTATTTTCACATCGGCTGGACGAG
AGGCTGGTTCGCCTTTTATTTTTGTGATATTCCATGCGTCGCCGGAACTC
CGTGCAATGGAGACGGGTGTCTCCAGGAATTTCTCAAAGATAGTATGACG
CGCGACGCGCATGGCTGTGTCCAACCCTTCATGCGCTACCACAGTTGCTT
TGAAACGTTGTTTTCCTGCCCTGCGCCATAAACTGTGTCAGGCAGGGTTC
GCCAAGCATGTGGAGATTTACACGTCGGTTCATTGGATGTGTTACTATTC
CCTTCAGCTGTACACCCGCAAACCGCTCCCGCGTACCTCAAGTATGTGAG
CCATTGTCGTCGTACAAATTCCTTGGACAGGAGTGCTTCGTGCCCATCCT
GTCCGAGACGAATCGGAGGCCTAACACCGTGCTCGGCGATTACTTGGGCG
ACTGGAGGGCGCCTTCGAGCAGCAAGGGCTCCGCGAGAGATCTCGAA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig9242:556..6002- >mRNA_E_fasciculatus_S2_contig9242.17302.1 ID=mRNA_E_fasciculatus_S2_contig9242.17302.1|Name=mRNA_E_fasciculatus_S2_contig9242.17302.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2787bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9242:556..6002- (Ectocarpus fasciculatus EfasUO2)
TCTTCTCTGTGCTCGGTGGTGGCAGTCGAAGCTCGGGAGGCCGAGGGGAT
CGGTGCTGCGGTCGTTGTCAACCTGGTGAACGGGGAGTTCGGGGAACGGG
CGAGTGCCCAAGCGATGCACATGCTGGACGAGCTCACGACTGCAGATGAC
ACAGTGGTGACGGGAAGGGGCTGCATCCAGGTTCCACCCAGCTTCGCCGA
AGCCATGGCTCGACACGGTCTTGCAGACCCTCGAAAGAGGCCCTTGGTGG
CGACCCGCTTGGCGGCCGCGCTCGCTGTTGTCCTCGGAGGAGGTGACGGC
ATCGCCAGAGGTGGTGTTGGAGCTGTTGTCTCGGCGGTTACGCTGTCGGC
CCCATCCTCGCCGTTGTTTTCGACTGTTCTCCTTCGAGGAACGGCGAGGA
TATGTTCTTCCCCGGACAGTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCT
CCTGCTGCGGCTGCTACCGCTCGGCGGGTTATCGCCAGCAGCTGCACGGC
GCTACACGGGCTCCTGCGCTCCGACGGCAAAGCCAAGAACGTCAGCCTTT
CTGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTGCCGCCGCGCATGCTCTC
TCGCCTACCCTCGAAGCGTTCGTCGAGGTCTGCCGTGCCGCCGAGGGTAC
CCCAGCGTCACCGGCAACAGCAGCGCCGTCATCGCGGGATGGAGGGGCGG
CCGCCAGCGGCTACTACTGCGGACACGCACGCTTGCGGGCGGGACAGAGC
GAAGAAGACGCTAGTAGCCGGCGAGAGGCCCGCCACGCGGTGTCCTCGCT
GCTTGACTTTGTTGACGGGCTCCTAGAGGACGAGACCAAGGAAGGCTTTC
ACCCAGCGGCCCAAGACCGATTCCAGGCCGGGGGTGGTGTGTTGTCATCC
CCTGCCCCCCGGCGCCATCGGTCACCCACAATCACCCCATCGCTACTGGC
CAAGAGTGCTGCTGCGAGGAGGATGTGGGTGGAGGTGCGGGGGCTCTGCG
GAGGAGAGGCGAACGCCAGGGCGGCGGCGTCGCAGCGGCTGGCGAGTTTG
CTGAAAGAGGCAGCGATTCCGGAGGACGAACGCGGCATCAAGCAAGGAGG
GGTTGCCCCCTTCCCTTTCCTCTACCTGGACGACCCCCTTCACCGGCCGC
CATCCGCAACCCCTATCGCTTCGACGGTCGCAAATAACGGGGCAAGAGGT
AAACCGGGGGAGACAGAGGGGGCGCCGTCGGAAGGCCAGACGTTGTCGTT
CTCGGCGGAGCACGTAAGGAACCTGGCGGACGTGGCGGGGGCCCCGTCGC
TGGAGGGGAGTCTGCGGAGGGCGGCGGCTGAGCAGCTTCGGGGGGTGCTC
GTGTCGCCGGGCGTCGCTGCGGTGGTGCTTTCGGAAACTGGAGACGAGGA
CCTCTGCAAGAGAGTTCTCAGCGCCGCGTTGTCGGGACTACTGCCGCGGC
CGCCGCCGCCGTCGTCCCCGCACCCCTCCCGTTCCGACGGCGACCGAAGC
GAAGACCCGTGGCCGTCGCCGCCACCACCCTGTCCGTTGCCGGGTTTCCC
ATCGGCGGCGGCGGCGTCGCCCGGCACAGTTGTTGCCGGTGGCCGTAACG
GCCGCAGCGGGTTCGGCGAGCACCTGTGGGATGAAGCGTTTCTCGGGCTG
TTGTTGGCGGCGGTGCGGCAGTTCGCCCCCGTCAGACGTTATTTGCTCGC
AGCCTGTAGTGGCTGCGATAGGGTCGGCTGGTCTAGGACGGCGGAGCCAG
AGCTCGCGGTAGTGACGCCTTCGGCGGGATCTCCTCCTCCGGGGCACCTG
TCCCCTAGTCGGAAGGGAGCAGCAGCAGCAGCGGCGGCCGTTGTCGCGCC
GAACGCCGTACCGGCCGTCCTCCGGCGTCTGTACCACCCCCGGCCGTCGG
TTCGGCGCTTGGCCGGCTCGGTCGCCGTCCGCCTGGCCTTCGACTCCCCT
TCCTTCTTCTCCCCCCTCGACTGTACTCTAGAGAGCCCCCCCTGTTCGGG
TGCGGGGCAGGATAGCGATCACGCGGGCGACGGTGGCGGCCGCTGTCGTG
TCGGCGGGGTCGCGAGCCTGGGAGAAGGGTTCTTGGTCCCGAAGATGGTT
CTCGAGGCGTTCCCTCGCCTGGTGGAGCTGACGAGGGAAGGGACTAGCGG
CGGTGGCGTTGGGAGTGAGAACAGGGGAAGCGCTTCAACCTCCCGCCGTG
ATGACAAGAACAGCAACAGCCCCAGCAGACGCCGGCACGAAGCCTTCCAG
ACCCTCGTCGCCAGCGAGTGGGCTCTCCTTCTTCTTGTCCTAGACACCGC
CCACGACGGCCCCGCCCACCACCCAGGGGTAGCCGCCGCCACCGATTCCT
CCTGTAAGAGTTTAAGCGAGAGGCAGCATCGCTCTGCAGTCGCTGCGCAG
GTAGCGGAGGCGTTGCGGGAGGCGGGGAGGCGTGCGGATTTTGAGGCGGC
GATGCTGAAGGCGCGGGCGTGGGCGCTGGCTGGCTTCGGCTACTCGGAAG
CCTTCTTCGGGCCAGACGGCGGGTGGGAGACCGCCTTGGAGAGGTTCTTA
CGAGCCCCTCCCAACGGCACGAAGGACAGGGCGGCAATGCGGGACGTTAC
CAGCCTTCTCGTCGCGGGGACGGATCACATGTGTCCCCGGGGGTTCCAAG
TTCTTGCGGACGCCGCGGAGGAGTGCTTCGTGCCCATCCTGTCCGAGACG
AATCGGAGGCCTAACACCGTGCTCGGCGATTACTTGGGCGACTGGAGGGC
GCCTTCGAGCAGCAAGGGCTCCGCGAGAGATCTCGAA back to top
|