mRNA_E_fasciculatus_S2_contig9226.17289.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P2_9PHAE) HSP 1 Score: 573 bits (1477), Expect = 6.420e-194 Identity = 300/355 (84.51%), Postives = 316/355 (89.01%), Query Frame = 2
Query: 494 GIVYGFYRLEIQTKKVGPSAPSGQELSSDATLAFGDDTDPTYYCHWYCTVRSALDSLNQNDGVPRDPNSPHEILKLIPEEFLEEHLTERHVQNRQDLNELVLDEGRRPYATLQGHGKLFLCSDKSVVVTKEHIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERAASVLVLGKPGSGKTTVLRDICRKISEEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNKV 1558
G + + L+ ++ G SAPS Q LSS+AT A DDT+PT SALDS Q+DGV +DPNSPHEILK IPEEFLEE+LTE H+QN QDLNELVLDEGRRPYATLQG GKLFLCSDKSVVVTKEHID VVGRLDLEDKFA DNRAGVPGQLHRISVMRSRE RRIFGVTLRIGRYF GSA LVDD+LFHVQ SPDKPERAASVLVLGKPGSGKTTVLRDICRKIS+EQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVP+KA QHNVMKEALQNHTPQTIVVDEVS+KNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNK+
Sbjct: 456 GRILTSFDLKQARERGGLSAPSRQALSSNATPAIFDDTNPT----------SALDSSKQSDGVAQDPNSPHEILKRIPEEFLEEYLTESHLQNLQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEDKFAGDNRAGVPGQLHRISVMRSREARRIFGVTLRIGRYFSGSASLVDDVLFHVQGSPDKPERAASVLVLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKAGQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNKI 800
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII7_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 1.320e-139 Identity = 212/220 (96.36%), Postives = 213/220 (96.82%), Query Frame = 2
Query: 899 VVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERAASVLVLGKPGSGKTTVLRDICRKISEEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNKV 1558
VVGRLDLE KFA DNRAGVPGQLHRISVMR REGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQ SPDKPERAASVLVLGKPG GKTTVLRDICRKIS+EQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDK DQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMA ATNAGNKV
Sbjct: 2 VVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKV 221
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R4_ECTSI) HSP 1 Score: 231 bits (588), Expect = 1.300e-67 Identity = 117/233 (50.21%), Postives = 169/233 (72.53%), Query Frame = 2
Query: 827 LQGHGKLFLCSDKSVVVTKEHIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERA----ASVLVLGKPGSGKTTVLRDICRKISEEQTVVIVDTSNEIAGDGHIPHLAAIGQ-SRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSV 1510
++G GK++LC D+ V+VT+ H++ VVG+L+ F DN AG G LHR+ VMR + G+ I+GVT+R+GRY G A +VDDLLF+ ++ +RA AS+LVLG+ G+GKTT++RD+CRK+S +TVVIVDT ++I G G +PH AIG+ SRR+MVP QH V+ +A +NH+PQTIVVDE+S++ + AC+ +KARG+RVVA A GDL +L++PE+ +GG +
Sbjct: 13 VKGRGKVYLCKDRGVLVTRYHLNCVVGKLEHLGLFGRDNMAGFDGLLHRVGVMRDKGGK-IYGVTIRVGRYAKGMADMVDDLLFNHHTATGSGKRASQAPASILVLGRHGAGKTTLVRDMCRKLSSHETVVIVDTRSDIGGAGVVPHRRAIGEESRRVMVPQGMQQHEVILQAYRNHSPQTIVVDEISSQLDIEACMAVKARGIRVVAGAVGDLPYVLDSPEIGAALGGLEDI 244
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW61_9PHAE) HSP 1 Score: 235 bits (599), Expect = 1.730e-63 Identity = 124/272 (45.59%), Postives = 183/272 (67.28%), Query Frame = 2
Query: 707 EILKLIPEEFLEEHLTERHVQNRQDLNELVLDEGRRP--YATLQGHGKLFLCSDKSVVVTKEHIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERA-ASVLVLGKPGSGKTTVLRDICRKISEEQTVVIVDTSNEIAGDGHIPHLAAIGQ-SRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSV 1510
E+LK +P+ F+ + + R R+P Y T +G GK++LC D+ V+VT+ H++ VVG+L+ F DN AG G LHR+ VMR + G+ I+GVT+R+GRY G A +VDDLLF+ + + +A AS+LVLG+ G+GKTT++RD+CRK+S +TVVIVDT ++I G G +PH AIG+ SRR+MVP QH V+ +A +NH PQT+VVDE+S++ + AC+ +K+RGVR+VA A GDL +L++PE+ +GG +
Sbjct: 1594 ELLKHMPKVFVNDIMAHR----------------RKPPKYCTCRGRGKVYLCKDRGVLVTRYHLNCVVGKLEHLGLFGRDNMAGFDGLLHRVGVMRDKGGK-IYGVTIRVGRYAKGMADMVDDLLFNHHVAKKRASQAPASILVLGRHGAGKTTLVRDMCRKLSSHETVVIVDTRSDIGGAGVVPHRGAIGEESRRVMVPQGTQQHEVILQAYRNHNPQTVVVDEISSQLDVEACMAVKSRGVRIVAGAVGDLPFVLDSPEIGAALGGLEDI 1848
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L513_9EUKA) HSP 1 Score: 218 bits (556), Expect = 3.580e-62 Identity = 136/327 (41.59%), Postives = 194/327 (59.33%), Query Frame = 2
Query: 695 NSPHEILKLIPEEFLEEHLTERHVQNRQ----DLNELVLDEGRRPYATLQGHGK----LFLCSDKSVVVTKEHIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLF--------------HVQSSPD------------KPERAA-----SVLVLGKPGSGKTTVLRDICRKISEEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNKV 1558
+S EI KL+PEEF +R V ++ +++LD+GR P+A + + FL D + V HID VV ++ +F D RAG+ G LHRIS M++ +G I+G+T RIGR F L+ DLL HV+++P P + + S+LVLG PGSGKTT++R+I R ++++ V +VDTSNEI GDG IPH +++G +RRMMVP +Q NVM E LQNHTP IV+DE+ +NE A +K RGVR++ASAHG+L++L++N +LN L+GG +VTLGD A TN +K+
Sbjct: 29 SSADEIFKLLPEEF------KRKVSPADFEYANIRDIILDKGRLPFAWIMFPNRPPQRKFLSDD--IKVDSTHIDSVVSKIG---QFGPDCRAGINGSLHRISCMKNLQGD-IYGLTFRIGRSFTKGTHLIMDLLLGNNVSLPNTKFTPPHVENNPTPLNKPFGTLGLPNPAKKSQFVGNSILVLGGPGSGKTTIIREIVRILADKFNVCVVDTSNEICGDGKIPH-SSVGLARRMMVPSVEEQGNVMVECLQNHTPDVIVIDEIGRRNEVEAAATVKQRGVRLIASAHGNLETLVKNKQLNGLIGGVETVTLGDMAAKKTNNNSKL 342
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IJU1_9STRA) HSP 1 Score: 221 bits (562), Expect = 4.350e-62 Identity = 128/279 (45.88%), Postives = 182/279 (65.23%), Query Frame = 2
Query: 707 EILKLIPEEFLEEHLTE-RHVQNRQ---DLNELVLDEGRRPYATLQGHGKLFLCSDKSVVVTKEHIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERAASVLVLGKPGSGKTTVLRDICRKISEEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMA 1531
+++ L+PE+ L + + + H+ DL ++ LD GRR + G+ ++FL D++ +VT E ID +V +L F +DNRAG+ +LHRIS M +R+G + G+++R+GR+F G+A ++ DLL DK S+L+LG+PGSGKTT++R+ R ++ V +VDTSNEIAGDG IPH IG +RRMMVP Q +VM E +QNHTP +V+DE+ E A +K RGVR++ASAHGDL+ LL+N EL LVGG SVTLGDA A
Sbjct: 159 DLINLLPEDLLSKLVQKGTHIPTHMAEYDLVDINLDVGRRACCWM-GNDRVFLSDDENRLVTMEEIDCIVSKLG---GFGTDNRAGLEQKLHRISGMCNRKGE-VIGLSMRVGRWFEGNAAMLVDLLL----GSDK-----SILILGEPGSGKTTIVREAVRVLASRHNVCVVDTSNEIAGDGDIPH-PCIGDARRMMVPSLDAQSSVMVECVQNHTPHIMVIDEIGRPREVEAARTVKQRGVRIIASAHGDLRKLLKNKELRGLVGGVESVTLGDAAA 422
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: Single-stranded (nucleic acid binding R3H domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F533_9CHLO) HSP 1 Score: 220 bits (560), Expect = 5.200e-62 Identity = 139/306 (45.42%), Postives = 192/306 (62.75%), Query Frame = 2
Query: 638 TVRSALDSLNQNDGVPRDPNSPHEILKLIPEEFLEEHLTERHVQNRQDLNELVLDEGRRPYATLQGHGKLFLCSD--KSVVVTKE---HIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERAASVLVLGKPGSGKTTVLRDICRKISEE--QTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDL-QSLLENPELNTLVGGTTSVTLGDAMA 1531
T S + + N D V +D + E+L ++PE+ E+ H R L E+VLD GR+P A G + S+ + VVT+E H +RVVG +F DNRAGV G LHRIS +R+R G+ I G+T R+GR G ++ D+L + SVL LGKPG GKTTV+R+I R +S++ + VVI+DTSNEI GDG IPH AIG +RRM VP+ ++QH VM EA++NHTP+ I+VDE+ + EA AC I RGV+++ +AHG L ++L++NP L+ LVGG T+VTLGD A
Sbjct: 12 TNSSGISNKNDGDVVIQDDLT--EMLSIVPEDVREKISKHAH---RSKLLEIVLDLGRQPEARFSGMEDVKKQSETLRDDVVTQEELDHAERVVG------EFGGDNRAGVTGTLHRISCIRNRSGK-IIGLTCRVGRAVTGHVDMIADVLNR--------DNGESVLFLGKPGVGKTTVIREIARVLSDDLQKRVVIIDTSNEIGGDGDIPH-PAIGSARRMQVPNPSEQHKVMIEAVENHTPEIIIVDEIGTEMEALACRTIAERGVQLIGTAHGRLLENLIKNPTLSDLVGGVTTVTLGDDEA 296
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FZ72_9STRA) HSP 1 Score: 216 bits (549), Expect = 6.340e-62 Identity = 121/250 (48.40%), Postives = 165/250 (66.00%), Query Frame = 2
Query: 782 LNELVLDEGRRPYATLQGHGKLFLCSDKSVVVTKEHIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERAASVLVLGKPGSGKTTVLRDICRKISEEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMA 1531
L+++VLD GRRP+ + ++FLC D+ +V ID + +L KF SDNRAG+ GQLHR S MR R+ + I G+T+R+GR G+A ++ DLL DK S+L+LG+PGSGKTT++R+ RK++E + ++ DTSNEIAGDG PH IG +RRMMVP Q M E +QNHTP +V+DE+ E +A +K RGVR++ASAHGDL+ LL+N +L LVGG SVT+GD MA
Sbjct: 19 LSDIVLDIGRRPHCWTRDC-RVFLCDDEFKLVQHSEIDEISAKLG---KFGSDNRAGLNGQLHRFSAMRDRDDQ-IAGITIRVGRNVNGNAAMLMDLLL----GSDK-----SILILGEPGSGKTTIVREAARKLAETKNAIVADTSNEIAGDGTHPH-QCIGLARRMMVPSLDKQSATMIECVQNHTPHVMVIDEIGRPKEVQAARTVKQRGVRMIASAHGDLRRLLKNKDLVGLVGGIESVTIGDDMA 253
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A235_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.250e-60 Identity = 135/277 (48.74%), Postives = 183/277 (66.06%), Query Frame = 2
Query: 707 EILKLIPEEFLEEHLTERHVQNRQDLNELVLDEGRRPYATLQGHGKLFLCSDKSVVVTKEHIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERAASVLVLGKPGSGKTTVLRDICRKISEEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASA 1537
EIL L+PE+ L LTE V + L ++VLD GRRP+A + G +LFL D +VT+E +D +V ++ F SDNRAG+ QLHRIS +R+R I G+T+R+GRY G+A ++ D+L + DK ++L LG+PG GKTT++R++ R+++ V IVDTSNEIAGDG IPH +G SRRMMVP Q VM E +QNHTP+ +V+DE+ NE A K RGVR++ASAHGDL+ LL+N L LVGG SVT+GDA+A +
Sbjct: 82 EILSLLPED-LATPLTEPTVAS--GLLDIVLDRGRRPWAWVNG-SRLFLV-DNDRLVTQEDLDGIVEKVG---GFGSDNRAGLERQLHRISAIRNRTSD-IMGLTIRVGRYIEGNASMIADIL----ENQDK-----NILFLGEPGCGKTTIVREVARQLASGHNVCIVDTSNEIAGDGDIPH-PCVGLSRRMMVPSLDQQARVMVECVQNHTPEIMVIDEIGRPNEVEAARTCKQRGVRMIASAHGDLRKLLKNKPLRGLVGGVESVTMGDALAKS 339
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUK0_9RHOD) HSP 1 Score: 211 bits (536), Expect = 1.900e-60 Identity = 120/269 (44.61%), Postives = 171/269 (63.57%), Query Frame = 2
Query: 788 ELVLDEGRRPYATLQGHG---KLFLCSDKSVVVTK---EHIDRVVGRLDLEDKFASDNRAGVPGQLHRISVMRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPER--AASVLVLGKPGSGKTTVLRDICRKIS-----EEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKADQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNK 1555
++ LD G RPY + G ++FL +D VVTK E ++ + +L +F DNRAG +LHR+S +R+ + I G+T+RIGR + ++ L+DDLLF +PER + S+L+LG+PG GKTT++RDI RK+S V ++DTSNEI GDG I H +++G + RMM+P + Q VM E LQNHTP I++DE+ K E +A +K R VR++ASAHGD +SL+ NP+L L+GG +VTLGDA + A N G K
Sbjct: 3 DIRLDYGERPYCWVSNEGTKERVFLVNDGPGVVTKVDRELLESITSKL----RFRGDNRAGFDRELHRVSAIRNTDDT-IIGLTMRIGRTYENNSYLIDDLLFQ------QPERGQSPSILILGRPGCGKTTIIRDIARKLSISNYSHNNNVWVIDTSNEIGGDGDIKH-SSLGLASRMMIPTGSSQKEVMVECLQNHTPDVIIIDEIGRKEEVQAAKTVKERDVRLIASAHGDFESLMRNPDLVGLIGGLQTVTLGDAASKAENDGRK 259 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9226.17289.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9226.17289.1 >prot_E_fasciculatus_S2_contig9226.17289.1 ID=prot_E_fasciculatus_S2_contig9226.17289.1|Name=mRNA_E_fasciculatus_S2_contig9226.17289.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=193bp MRSREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQSSPDKPERAASVLVLback to top mRNA from alignment at E_fasciculatus_S2_contig9226:304..5907- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9226.17289.1 ID=mRNA_E_fasciculatus_S2_contig9226.17289.1|Name=mRNA_E_fasciculatus_S2_contig9226.17289.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5604bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9226:304..5907- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9226:304..5907- >mRNA_E_fasciculatus_S2_contig9226.17289.1 ID=mRNA_E_fasciculatus_S2_contig9226.17289.1|Name=mRNA_E_fasciculatus_S2_contig9226.17289.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=579bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9226:304..5907- (Ectocarpus fasciculatus EfasUO2)back to top |