mRNA_E_fasciculatus_S2_contig9225.17288.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 361 bits (926), Expect = 1.840e-101 Identity = 203/213 (95.31%), Postives = 207/213 (97.18%), Query Frame = 3
Query: 3 EIVSGVNNRYEGSPVPDQQRVNGVAPAANGXXXXXXXXXXXXXXXXXXXXXXXXXPGKSAAARVEPGDSSDEDEEAKADAKAFVNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLLLTFAISLIK 641
EIVSGVNN YEGSPVPDQQRVNGVAPAANG XXXXXXXXXXXXXXXXXXXXXPGKS AARVEPGDSSDEDEEAKADAKAFVNTIKNMTGLWDDDPDE+YWLNMERTNYETGQKEQMGKCLMGVQIWPIEKA+LQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLLLTFA+SLI+
Sbjct: 2017 EIVSGVNNLYEGSPVPDQQRVNGVAPAANGGVVRXXXXXXXXXXXXXXXXXXXXXPGKSVAARVEPGDSSDEDEEAKADAKAFVNTIKNMTGLWDDDPDESYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKAELQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLLLTFALSLIQ 2229
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L724_9PHAE) HSP 1 Score: 287 bits (734), Expect = 2.590e-85 Identity = 176/212 (83.02%), Postives = 181/212 (85.38%), Query Frame = 3
Query: 3 EIVSGVNNRYEGSPVPDQQRVNGVAPAANGXXXXXXXXXXXXXXXXXXXXXXXXXPGKSAAARVEPGDSSDEDEEAKADAKAFVNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLLLTFAISLI 638
EIV GVNN YEG VNGVAPAANG XXXXXXXXXXXXXXXXXX P KS AARVEPGDSSDEDEEAKADAKAFVNTIKNMTGLWDDDPDE + Y ++EQMGKCLMGVQIWPIEKA+LQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLLLTFA+SLI
Sbjct: 126 EIVGGVNNLYEG--------VNGVAPAANGGVVPEXXXXXXXXXXXXXXXXXXC-PWKSVAARVEPGDSSDEDEEAKADAKAFVNTIKNMTGLWDDDPDEA----RKEEKYRI-EEEQMGKCLMGVQIWPIEKAELQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLLLTFALSLI 323
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKT2_9STRA) HSP 1 Score: 139 bits (351), Expect = 7.340e-31 Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 3
Query: 246 AFVNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSG-FFNLLLTFA 626
A + +IK TGLWD DP ++ W+ MER N ET KE MG + +++ P+EKA +Q VG GR+DPN+ PFLPPPAGRL+FS+NPF + +EL GP IC K+ C C C+++I+ +YF G F NLL+ A
Sbjct: 434 AAIRSIKESTGLWDTDPTDSTWIKMERLNRETNVKEPMGAVCISMELVPVEKAKIQAVGFGRSDPNNTPFLPPPAGRLKFSMNPFYVFNELLGPAICRKVMC-CLCLVAIMAAMYFLGPFMNLLIVLA 560
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D049_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.100e-30 Identity = 72/143 (50.35%), Postives = 96/143 (67.13%), Query Frame = 3
Query: 189 RVEPGDSSDEDEEAKADAKAFVNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLLL 617
+ E DEDEEA A VNT K GL D P ++ WLNM++ N+ETG ++ MGK + +QI P+ A++ P G G+ DPNS PFLPPP GR++FSLNPFVMGSEL GPK+CA AC C++ +LLL++ + NL+L
Sbjct: 1705 KAEGAAEQDEDEEA---AMEMVNTFKEFAGLGDSKPKDSEWLNMDKFNHETGIRDAMGKVCIRLQIVPLIIAEVTPAGFGQTDPNSNPFLPPPQGRMKFSLNPFVMGSELCGPKLCAYFACCLLCIVIVLLLIFCNPLLNLVL 1844
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD61_SAPPC) HSP 1 Score: 142 bits (358), Expect = 1.410e-30 Identity = 64/116 (55.17%), Postives = 88/116 (75.86%), Query Frame = 3
Query: 252 VNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSG 599
+ +IK TGLWD DP ++ W+ MER N ETGQKE MG + +++ PI+KA +Q VG GR+DPN+ PFLPPPAGRL+FS+NPF + +EL GPKIC ++ C CC++ I++L+YF G
Sbjct: 1635 IRSIKEATGLWDTDPTDSTWIKMERLNRETGQKEAMGALCISMELVPIDKAKVQTVGFGRSDPNNSPFLPPPAGRLKFSMNPFYVFNELLGPKICHRVMCCLCCIL-IMVLMYFLG 1749
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C8F1_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.130e-30 Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 3
Query: 246 AFVNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSG-FFNLLLTFA 626
A + +IK TGLWD DP ++ W+ MER N ET KE MG + +++ P+EKA +Q VG GR+DPN+ PFLPPPAGRL+FS+NPF + +EL GP IC K+ C C C+++I+ +YF G F NLL+ A
Sbjct: 688 AAIRSIKESTGLWDTDPTDSTWIKMERLNRETNVKEPMGAVCISMELVPVEKAKIQAVGFGRSDPNNTPFLPPPAGRLKFSMNPFYVFNELLGPAICHKVMC-CLCLVAIMAAMYFLGPFMNLLIVLA 814
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX73_HETAK) HSP 1 Score: 126 bits (317), Expect = 5.210e-30 Identity = 59/127 (46.46%), Postives = 86/127 (67.72%), Query Frame = 3
Query: 237 DAKAFVNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLLL 617
+A FVN++K+ GL D DP + W+ +E+T++ TG K+QMGK + + I+P ++A+ QPVG GR+ PN P+ PPP GRL+FSLNPF M S+L GPKI + C V+ LL +Y S F N+++
Sbjct: 25 EADEFVNSLKSFAGLGDSDPPNSKWMTLEKTDHNTGTKQQMGKVCLSISIYPKDQANAQPVGFGRSAPNMNPYCPPPVGRLKFSLNPFSMLSQLLGPKITCYVICCLFLVLFALLSIYCSPFLNIVI 151
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTL2_9STRA) HSP 1 Score: 140 bits (352), Expect = 9.220e-30 Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 3
Query: 252 VNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSG 599
+ +IK TGLWD+DP ++ W+ MER N ETGQKE MG + +++ P+EKA + VG GR+DPN+ PFLPPPAGRL+FS+NPF + +EL GPKIC ++ C C C + I++L+YF G
Sbjct: 3429 IRSIKEATGLWDNDPTDSTWIKMERLNRETGQKEAMGAVCISMELVPVEKAKVMTVGFGRSDPNNSPFLPPPAGRLKFSMNPFYVFNELLGPKICHRVMC-CLCXLLIMVLMYFLG 3543
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Uncharacterized (protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKQ4_9STRA) HSP 1 Score: 139 bits (351), Expect = 9.710e-30 Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 3
Query: 246 AFVNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSG-FFNLLLTFA 626
A + +IK TGLWD DP ++ W+ MER N ET KE MG + +++ P+EKA +Q VG GR+DPN+ PFLPPPAGRL+FS+NPF + +EL GP IC K+ C C C+++I+ +YF G F NLL+ A
Sbjct: 1668 AAIRSIKESTGLWDTDPTDSTWIKMERLNRETNVKEPMGAVCISMELVPVEKAKIQAVGFGRSDPNNTPFLPPPAGRLKFSMNPFYVFNELLGPAICRKVMC-CLCLVAIMAAMYFLGPFMNLLIVLA 1794
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BA36_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.050e-28 Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 3
Query: 252 VNTIKNMTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSG-FFNLLL 617
+ +IK TGLWD DP ++ W+ MER N ET KE MG + +++ PI+KA +Q VG GR+DPN+ PFLPPPAGRL+FS+NPF + +EL GPKIC K C C C++ ++ +YF G F NL++
Sbjct: 979 IRSIKEATGLWDTDPTDSTWIKMERLNRETNVKEPMGAVCISMELVPIDKAKIQTVGFGRSDPNNGPFLPPPAGRLKFSMNPFYVFNELLGPKICRKFMC-CLCIVIVMAAMYFLGPFMNLII 1100 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9225.17288.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9225.17288.1 >prot_E_fasciculatus_S2_contig9225.17288.1 ID=prot_E_fasciculatus_S2_contig9225.17288.1|Name=mRNA_E_fasciculatus_S2_contig9225.17288.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=125bp MTGLWDDDPDETYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKADLQPVback to top mRNA from alignment at E_fasciculatus_S2_contig9225:1016..6157- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9225.17288.1 ID=mRNA_E_fasciculatus_S2_contig9225.17288.1|Name=mRNA_E_fasciculatus_S2_contig9225.17288.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5142bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9225:1016..6157- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9225:1016..6157- >mRNA_E_fasciculatus_S2_contig9225.17288.1 ID=mRNA_E_fasciculatus_S2_contig9225.17288.1|Name=mRNA_E_fasciculatus_S2_contig9225.17288.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=375bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9225:1016..6157- (Ectocarpus fasciculatus EfasUO2)back to top |