mRNA_E_fasciculatus_S2_contig919.17246.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U7_ECTSI) HSP 1 Score: 322 bits (826), Expect = 2.190e-109 Identity = 147/153 (96.08%), Postives = 150/153 (98.04%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNSAGTTGLTVPQ 465
RESLWKRLKGDGIRREEPATWVRKIGI EIYGISSSPKKRRGHPWKGALSPKLKSAV+QLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILW+ AGTTGLT P+
Sbjct: 65 RESLWKRLKGDGIRREEPATWVRKIGIPEIYGISSSPKKRRGHPWKGALSPKLKSAVNQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWDRAGTTGLTGPE 217
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJD1_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.690e-48 Identity = 73/140 (52.14%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKIL 426
R +W+RL DGI + +P+TWV + GI EIY +P W G L+P+LK A+DQL G D WE+FGCGWWM+TFP A+PPW A GKWH+DGA ++H+ S+E G+L +FLFSD+ GGTA+ GSHK +A++L
Sbjct: 79 RALIWERLVQDGIEKSDPSTWVERHGIPEIYTAEDAPV------WDGVLTPRLKQAMDQLCGRDRWEDFGCGWWMITFPDQAEPPWEAAGKWHVDGAAYQHHLDSKESGLLAVFLFSDIAPGEGGTALSVGSHKWIARLL 212
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8D1_GLOUD) HSP 1 Score: 164 bits (414), Expect = 1.470e-46 Identity = 74/140 (52.86%), Postives = 94/140 (67.14%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKIL 426
RE +W+RL+ DGIR+ + +TWV + GI EIY P W L+P+L AVDQL G SWEEFGCGWWM+TFP A PPW A GKWH+DGA ++H+ S+E G+L IF FSDV GGTA+ GSH +A++L
Sbjct: 73 RELVWRRLEKDGIRKSDSSTWVERHGIPEIYNGDDDPL------WNDVLTPRLHRAVDQLCGQGSWEEFGCGWWMITFPNQADPPWEAAGKWHVDGASYQHHLDSKESGLLAIFCFSDVGPTEGGTALSVGSHVPIAQLL 206
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBK7_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.360e-44 Identity = 69/140 (49.29%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKIL 426
RE +W+RL DGI ++ +TWV + GI E+Y WK ++P+LK AVDQL G++ W++FG GWW++TFPG A+PPW A GKWH+DGA ++H+ S+E G+L IFLFSD+ GGTA+ GSHK++A++L
Sbjct: 54 REVIWQRLAQDGITKDS-STWVERHGIPELYTAKDDIV------WKDVVTPRLKQAVDQLCGINKWKDFGLGWWIITFPGQAEPPWEAAGKWHVDGATYQHHVDSQESGLLAIFLFSDIGPGEGGTALSVGSHKRIARML 186
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XXV7_9STRA) HSP 1 Score: 155 bits (392), Expect = 9.330e-44 Identity = 70/140 (50.00%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKIL 426
RE +W+RL D I ++ +TWV + GI E+Y P W ++P+LK A+DQ+ G D WE+FG GWWM+TFP ++PPWGA GKWH+DGA ++H+ S+E G+L IFLFSD+ GGTAV GSHK VA++L
Sbjct: 60 RELIWQRLAQDNITKDS-STWVERHGIPELYTTEDDPV------WGDVVTPRLKRAMDQICGKDRWEDFGLGWWMITFPDQSEPPWGAAGKWHVDGASYQHHVDSKESGLLIIFLFSDIGPGEGGTAVSVGSHKWVARLL 192
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Phytanoyl-CoA (dioxygenase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5H3_PLAHL) HSP 1 Score: 155 bits (393), Expect = 1.160e-43 Identity = 68/140 (48.57%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKIL 426
RE +W+RL DGI ++ P+TWV + GI E+Y + ++P W L+ +LKSA+DQ+ G WE+FG GWWM+TFP ++PPW A GKWH+DGA ++H+ S+E G++ IFLF+D+ GGTA+ GSHK VA++L
Sbjct: 52 RELIWERLAQDGIGKD-PSTWVERHGIPELYTVENNPV------WDDVLTRRLKSAIDQICGQGRWEDFGLGWWMITFPEQSKPPWDAAGKWHVDGASYQHHIDSKESGLVAIFLFTDINPGEGGTALSVGSHKNVARLL 184
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C4L5_PHYNI) HSP 1 Score: 156 bits (394), Expect = 1.190e-43 Identity = 69/140 (49.29%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKIL 426
R+ +W RL+ DGI ++ P+TWV + GI E+Y +P W ++P+LK A+ Q+ G D WE FG GWWM+TFP A+PPWGA GKWH+DGA ++H+ ++E G+L IFLFSD+ GGTA+ GSHK VA++L
Sbjct: 58 RDLIWTRLEQDGITKD-PSTWVERHGIPELYTAEDNPV------WSDVVTPRLKRAMHQICGKDRWENFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDNKEAGLLLIFLFSDIGPGEGGTALSVGSHKWVARLL 190
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S5P2_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.510e-43 Identity = 69/140 (49.29%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKIL 426
R+ +W RL DGI ++ +TWV + GI E+Y + P W ++P+LK A+DQ+ G D WE+FG GWWM+TFP A+PPWGA GKWH+DGA ++H+ S+E G+L IFLFSD+ GGTA+ GSHK +A +L
Sbjct: 54 RDLIWTRLAQDGITKDS-STWVERHGIPELYTVEDDPV------WGDVVTPRLKRAMDQICGKDRWEDFGLGWWMITFPDQAEPPWGAAGKWHVDGASYQHHVDSKESGLLVIFLFSDIGPGEGGTALSVGSHKWIAGLL 186
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9P8_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.780e-43 Identity = 74/162 (45.68%), Postives = 101/162 (62.35%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFG--CGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKILWNSAGTTGLTVPQTWLQSKS 486
RE LW R++ DG+++++ +TW K I+E Y ++ G PW L+P+LKSA+DQL G D W E CGWW++TFPG A PWG G WH+DGAH+ H S+E G+LPIF+FSD+ GGTA+ GSH VA IL ++ GL + +KS
Sbjct: 42 REFLWARIEQDGVKQDDCSTWPEKHWISESYSDAT------GEPWTEVLTPRLKSAMDQLCGKDRWNESDLVCGWWVITFPGHAMLPWGPAGHWHVDGAHYIHKLDSKESGLLPIFIFSDINPGDGGTALAPGSHMHVAHILQDAIPHGGLKGGKVSASAKS 197
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7J4_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.210e-43 Identity = 68/140 (48.57%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 7 RESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGALSPKLKSAVDQLAGVDSWEEFGCGWWMVTFPGFAQPPWGAEGKWHIDGAHFRHYPHSREIGILPIFLFSDVRKHGGGTAVLRGSHKKVAKIL 426
R +W+RL DGI + TWV + GI EIY P W L+ +L+ A+DQL G +WE+FGCGWWM+TFPG A+PPW A GKWH+DGA ++H+ SRE G+L I FSD+ GGTA+ GSH +A++L
Sbjct: 76 RALIWQRLAADGISEHDAHTWVERHGIPEIYTREHDPI------WGDVLTERLERAIDQLCGAGAWEQFGCGWWMITFPGLAEPPWDAAGKWHVDGAAYQHHLDSRESGLLAIMCFSDIAPTEGGTALAVGSHAPIARLL 209 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig919.17246.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig919.17246.1 >prot_E_fasciculatus_S2_contig919.17246.1 ID=prot_E_fasciculatus_S2_contig919.17246.1|Name=mRNA_E_fasciculatus_S2_contig919.17246.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=195bp MDRESLWKRLKGDGIRREEPATWVRKIGIAEIYGISSSPKKRRGHPWKGAback to top mRNA from alignment at E_fasciculatus_S2_contig919:6933..9416+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig919.17246.1 ID=mRNA_E_fasciculatus_S2_contig919.17246.1|Name=mRNA_E_fasciculatus_S2_contig919.17246.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2484bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig919:6933..9416+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig919:6933..9416+ >mRNA_E_fasciculatus_S2_contig919.17246.1 ID=mRNA_E_fasciculatus_S2_contig919.17246.1|Name=mRNA_E_fasciculatus_S2_contig919.17246.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=585bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig919:6933..9416+ (Ectocarpus fasciculatus EfasUO2)back to top |