mRNA_E_fasciculatus_S2_contig9164.17232.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ3_ECTSI) HSP 1 Score: 191 bits (484), Expect = 3.360e-60 Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 1
Query: 1 EQNEDGWTPLHACCHSATTASIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPL 264
+QNEDGWTPLHACCHSATTA+IGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPL
Sbjct: 109 QQNEDGWTPLHACCHSATTAAIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPL 196
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM2_9PHAE) HSP 1 Score: 131 bits (329), Expect = 1.870e-37 Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 1
Query: 82 EEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPL 264
+EVVAMGGDLN RTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPL
Sbjct: 13 QEVVAMGGDLNPRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPL 73
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV44_HETAK) HSP 1 Score: 118 bits (296), Expect = 2.310e-30 Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 1
Query: 4 QNEDGWTPLHACCHSATTASIGLRILEEVVAMGG-DLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPL 264
QNE GW PLHACCHS TA+ G+ ++E + A GG D N RT RGPG FN+G+TPLH+A AYGV+ +VE L+ AGADPN N W PL
Sbjct: 119 QNEAGWLPLHACCHSQATAAAGVALIEAMAASGGADWNARTARGPGPFNAGWTPLHIAAAYGVRPVVEELLAAGADPNVENSLTWTPL 206
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU65_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.210e-29 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 7 NEDGWTPLHACCHSATTASIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFD 252
NE GWTPLHACCHS + G +L EVV + GDLN RT+RGPG+FN+ +T LHMACAYG+ +V+ALI+AGAD +CRN D
Sbjct: 114 NEAGWTPLHACCHSVGAVAAGKEVLAEVVRVNGDLNARTERGPGSFNANWTALHMACAYGILPMVQALIEAGADVDCRNSID 195
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ7_9STRA) HSP 1 Score: 112 bits (279), Expect = 6.370e-28 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 EQNEDGWTPLHACCHSATTASIGLRILEEVVAMGGD---LNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDF 249
E NE+GW PLHACCH+ A G IL+E+V G +N +TKRGPG +N G+TPLHMACAYG+ + EAL+ AGADPNC+N
Sbjct: 75 EANENGWLPLHACCHNQGLAGAGCEILDEMVRKGAGADLINAKTKRGPGPYNKGWTPLHMACAYGIPRVAEALLVAGADPNCQNSL 160
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT12_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.110e-26 Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 7 NEDGWTPLHACCHSATTASIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDWGPL 264
NEDGWTPLHACCH+ T L IL+E+V L +T RGPG + SG+T LHMA AYGV+ LVEAL++AGAD N +ND W PL
Sbjct: 93 NEDGWTPLHACCHNHQTMGAALDILKELVKRKASLERKTVRGPGAYASGWTVLHMAAAYGVEPLVEALLEAGADVNTKNDQGWTPL 178
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: Aste57867_22255 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJM7_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.150e-24 Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 7 NEDGWTPLHACCHSATTASIGLRILEEVVAMGG--DLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDW 255
N+DGWTPLHA CH+ G IL+ ++A G DLNL+T RGPG+F+SG+TPLH+ACAYG++ LV LIKA AD + N W
Sbjct: 122 NKDGWTPLHASCHTLNAVDAGKAILKAMLAQDGSVDLNLKTSRGPGSFSSGYTPLHIACAYGMEPLVVKLIKANADVHVTNSVQW 206
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: U-box (domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3R2_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.800e-24 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 7 NEDGWTPLHACCHSATTASIGLRILEEVVAM--GGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDFDW 255
N+DGWTPLHA CH+ G IL+ ++A DLN++T RGPG+F+SG+TPLH+ACAYG++ LV LIKA AD + ND W
Sbjct: 124 NKDGWTPLHASCHTLNAVDAGKAILKAILAQDPSADLNVKTSRGPGSFSSGYTPLHIACAYGMEALVVKLIKASADVHVTNDVHW 208
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT85_9STRA) HSP 1 Score: 103 bits (256), Expect = 8.780e-24 Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 7 NEDGWTPLHACCHSATTASIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRNDF 249
NEDGWTPLH+CCHS TT S GL ILEE+ L ++TKRGP NSG+T LHMA AYGV+ LV L+ A+ NCRN
Sbjct: 107 NEDGWTPLHSCCHSHTTVSAGLAILEEMSYRNASLEVKTKRGPSAHNSGWTALHMASAYGVEPLVVQLLAHRANANCRNSL 187
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Match: U-box (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X801_GLOUD) HSP 1 Score: 102 bits (253), Expect = 2.370e-23 Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 1 EQNEDGWTPLHACCHSATTASIGLRILEEVVAMGGDLNLRTKRGPGNFNSGFTPLHMACAYGVKELVEALIKAGADPNCRN 243
+ N D WTPLH+CCH+ G+ IL+E+VA DLNL TKRGPG+F+ G+TPLH+ACAYG++ L LI+AGA+ N N
Sbjct: 127 QPNFDNWTPLHSCCHTLNAQEAGISILQELVAQKADLNLVTKRGPGSFSCGWTPLHIACAYGLETLSLKLIRAGANVNVMN 207 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9164.17232.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9164.17232.1 >prot_E_fasciculatus_S2_contig9164.17232.1 ID=prot_E_fasciculatus_S2_contig9164.17232.1|Name=mRNA_E_fasciculatus_S2_contig9164.17232.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=88bp EQNEDGWTPLHACCHSATTASIGLRILEEVVAMGGDLNLRTKRGPGNFNSback to top mRNA from alignment at E_fasciculatus_S2_contig9164:229..1321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9164.17232.1 ID=mRNA_E_fasciculatus_S2_contig9164.17232.1|Name=mRNA_E_fasciculatus_S2_contig9164.17232.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1093bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9164:229..1321- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9164:229..1321- >mRNA_E_fasciculatus_S2_contig9164.17232.1 ID=mRNA_E_fasciculatus_S2_contig9164.17232.1|Name=mRNA_E_fasciculatus_S2_contig9164.17232.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=264bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9164:229..1321- (Ectocarpus fasciculatus EfasUO2)back to top |