mRNA_E_fasciculatus_S2_contig91.17174.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: Mannuronan (C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 892 bits (2304), Expect = 0.000e+0 Identity = 436/561 (77.72%), Postives = 466/561 (83.07%), Query Frame = 1
Query: 1 CSNGLIGVETDGICCDIDCGTCGGGDCRRRGNGLEAGDCCTRFISENGAPCSESGSAPCIIDDVADGDIPTTLSPTPLMTIPTTCAASTGRPTFRYAASTGVNGRVYAEGEGCFTITDIYKSRLESDGSGKGPIYNLDDSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTGDVCEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVRGFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVSNGRPSDNLFENNRILSARSGVKFKDSDDIVITDNVFTGTSELEFFDAQDTLWYGNDLPQGVCIKNIFSDDGIDIELSTFDMRTTGLPTLEC 1683
CSNG +GV+++ ICC +DCGTCGG +CRRRG GL A DCC +IS+NGA CSE+ SAPCI+DDV G+ P AEGEGCFTITD+Y RLESDGS KGPI+NLDDSYN VLNP+VLSNKWLLTAELHITGGA+FYCRGSSIGGDCDELRIQSTGP DFHEVRAHGGSMYFESTIVTSWDTPNKTPQATY GGRSFLNCVSEKLTG+VC G AQNE GECRMDIINSEIGY+GYF SESYGLTWKVRGFC DLSNPDVFDTTNVYG+LIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT IIASKRCNNVQIYNN+VYDGG A GIFLHRSSDYAIVHDNVV DMQDAGMA+LE+MNADIYNN FS VKFGIRLSLGSS+N+VHEN FEDVS+ GLYTYQGSD+PT+GVS+GRPSDNLFENNRIL+ GVK K+ DD VITDNVFTGTSELEFFDAQ+T W GN LPQGVCIKNI SDDGIDIELSTFD RT GLPTLEC
Sbjct: 12 CSNGFVGVQSENICCHVDCGTCGGSECRRRGKGLGAADCCRNYISKNGALCSENLSAPCIMDDVT-GNTPD------------------------------------AEGEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTFDRRTAGLPTLEC 523
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: MEP1 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 622 bits (1603), Expect = 2.340e-218 Identity = 303/464 (65.30%), Postives = 362/464 (78.02%), Query Frame = 1
Query: 322 AEGEGCFTITDIYKSR-LESDGSGKGPIYNLDDSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTGDVCEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVR---------GFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVSNGRPSDNLFENNRILSARSGVKFKDSDDIVITDNVFTGTSELEFFDAQDTLWYGNDLPQGVCIKNIFSDDGIDIELSTFDMRTTGLPTLEC 1683
AE EGCFT+TD+Y R E+DGS KGP+Y LD S + + P ++ KWLL AEL++T GAIFYC GS GGDCDELRIQSTGPDD++EVR HGGSMYF T+VTSWDTPNK PQ TYEGGRSFLNCVSEKLTG+ C+GMA+N+ GECRMDIINSE+GYMG+F SESYGLTWKVR GFC DLSNPDVF+TTNVYGD+ SDIHH YYG YSYGHQGGVW NN+MHDNHQY +++N+V+NN NHGIIASKRCNNV+IY+N+V DGG +AVGIFLHRSSD A V+ N + +M DAG+ALLE+ NADI++N+ GV+FGIR+SLGS N V++N F D S GLYTY GSD+P VSNGRP+ N F NN++ ++ GVKFK+SD+IV+T+N FTGT ELEF+DAQ T W GN LP GVCI NI SDDG + STF ++G+P+ EC
Sbjct: 17 AESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPD--VSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFS-SSSGVPSEEC 465
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: Mannuronan (C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 634 bits (1635), Expect = 4.860e-217 Identity = 307/467 (65.74%), Postives = 366/467 (78.37%), Query Frame = 1
Query: 232 LMTIPTTCAASTGRPTFRYAASTGVNGRVYAEGEGCFTITDIYKSR-LESDGSGKGPIYNLDDSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTGDVCEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVRGFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVSNGRPSDNLFENNRILSARSGVKFKDSDDIVITDNVFTGTSELEFFDAQDTLWYGNDLPQGVCIKNIFSDDGID 1629
LM I ++C RP+FRYAAS+GV GR+YAEGEGCFT+TD+Y R E+DGS KGP+Y LDD + P ++N WLL AEL+ITGG +FYC+G+S GGDC++LRIQSTG DDFHEVR HGGS+YFE TIVTSWDTPNK PQ TYE GRSFLNCVSEKLTGD CEG A+NE GECRMDIINSEI Y+GYF SESYG+TWKVRGFC DLSNP+VF+ TNVYGDL GSDIHH YYG YSYGHQGGVW NN+MHDN QYGFDPHDDSDYLTI++NEV+NNVNHGIIASKRCNNV+I+ N+V DGGA A GIFLHRSSD A V DN +++MQDAG+A+LE+ +A IY N +G K+GIR+SLGS +N V++N+F D+S +GLYTY+GSD+P VS+GRPS N+ N + GVK K+ DD N F EF ++ +T+W GND+ G CI+ DD D
Sbjct: 414 LMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPD--VSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEE---DDEFD 874
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 543 bits (1400), Expect = 7.740e-188 Identity = 265/455 (58.24%), Postives = 343/455 (75.38%), Query Frame = 1
Query: 325 EGEGCFTITDIYKSR-LESDGSGKGPIYNLDDSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTG-DVCEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVRGFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVSNGRPSDNLFENNRILSARSGVKFKDSDDIVITDNVFTGTSELEFFDAQDTLWYGNDLPQGVCIKNIFSDDGIDIELSTFDMRTTGLPTLEC 1683
+G GCFT++D+Y + ++G+ KGP++ LD + + + KWLLTA+L +TGGA YCRG +GG+C ELRI+ST DF E+R HGG++YFE TIVTSWD + PQ TY+ GRSF+ CVSE LTG D C A N GECRMDII+SE+GY+GY +SE+YG+TWKVRGFC+DLSNPDVFD NVYGD+ GSDIHH YYG YS+GHQGGVW NN MHDNHQYGFDPHDDSDYL I+ N+V+NNVNHGIIASKRCNNV+IY+N+VYDGGA+A GIFLHRS D + V+ N +++M DAG+A+LET DI++N G +FGIR+ LGSS+N VH+N F+++ + G++TY GSD+P G GRP DN F NN I + +GVK K+SD+I IT+N F+GT+E+EF +A D +W GN +P C+++I ++ STF ++GLP LEC
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVG--GGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNN-------STFT-GSSGLP-LEC 447
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 499 bits (1285), Expect = 1.250e-171 Identity = 253/425 (59.53%), Postives = 291/425 (68.47%), Query Frame = 1
Query: 409 LDDSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTGDVCEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVRGFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVSNGRPSDNLFENNRILSARSGVKFKDSDDIVITDNVFTGTSELEFFDAQDTLWYGNDLPQGVCIKNIFSDDGIDIELSTFDMRTTGLPTLEC 1683
LDDS N + +P ++ KWLL +EL++T GAIFYC GS GGDCDELRIQSTGPDD++EVR HGGSMYF T+VTSWDTPNK PQ TYEGGRSFLNCVSEKLTG+ C+G A+N+ GECRMDIINSE+GYMG+F +ESYGLTWKVRGFC DLSNPDVF+TTNVYGD+ S+IHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLTI+ ASKRCNNVQIYNN+V DGG EAVGIFLHRSSD NA++Y G D P VSNGRP+ N F NN+I + GVK K+SD+IVI++N FTGT ELEFFDAQ T W N LP GVCI N+ SDDG + STF ++G+P+ EC
Sbjct: 2 LDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSD-----------------------NAEVYG--------------------------------GXXXXXXXDAPD--VSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPSTFS-SSSGVPSEEC 368
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: MEP2 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 493 bits (1269), Expect = 2.170e-169 Identity = 239/346 (69.08%), Postives = 273/346 (78.90%), Query Frame = 1
Query: 346 ITDIYKSR-LESDGSGKGPIYNLDDSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTGDVCEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWK--------VRGFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVS 1356
+TD+Y R E DGS KGP+Y LDD + P ++N WLL AEL+ITGG +FYC+G+S GGDC++LRIQSTG DDFHEVR HGGS+YFE TIVTSWDTPNK PQ TYEGGRSFLNCVSEKLTGD CEG A+NE GECRMDIINSEI Y+GYF SESYG+TWK VRGFC DLSNP+VFD TNVYGDLIGSDIHH YYG YSYGHQGGVW NN+MHDN QYGFDPHDDSDYLT IIASKRCNNV+I+ N+V DGGA AVGIFLHRSSD A V DN +++MQDAG+ALLE +A IY N +G K+GIR+SLGS +N V++N+F D+S
Sbjct: 1 MTDLYNFRGTEKDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDIS 334
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: Mannuronan (C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 438 bits (1126), Expect = 8.530e-144 Identity = 234/448 (52.23%), Postives = 302/448 (67.41%), Query Frame = 1
Query: 319 YAEGEGCFTITDIYKSRLESDGSGKGPIYNLDDSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTGDV--CEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVRGFCT---DLSNP---DVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVSNGRPSDNLFENNRILSARS--GVKFKDSDDIVITDNVFTGTSELEFFDAQDTLWYGNDLPQGVCIKNI--FSDDGI 1626
Y EG GC T+T +Y+++ G GP+Y LD++ ++V + WLL L + G+ G++ GD D LR+ ST DDF EVR +GG+++F+ST VTSWDT N + GRSF+NCV++ + C+G + E GECRMDII+S +G MG+F +ESYGLTWKVRG C D P ++F+ NVYGD++ S+I+ YYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTIS+N V+ N NHGIIASKRCNNV+I+NN+VYDGG +AVGIFLHRSSD A VHDNVV +MQDAGMA++E+ +A+IY+N F+ ++GIRLSLGS N + N F ++ +GLYTY GSDDP SNGRPSDN+F+ N I + GV K+ D V DNVFTG S EF D+ DT W N G C+ F++ GI
Sbjct: 192 YFEGGGCGTLTQMYEAQ-----EGDGPLYVLDENNDVVGGTP--TGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTS-DDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN--TGGGCLDGSTDFAEGGI 629
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: MEP13 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 429 bits (1104), Expect = 7.040e-138 Identity = 222/446 (49.78%), Postives = 293/446 (65.70%), Query Frame = 1
Query: 310 GRVYAEGEGCFTITDIYKSRLESDGSGKGPIYNLDDSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTG--DVCEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVRGFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVS-NGRPSDNLFENNRILSARSGVKFKDSDDIVITDNVF---TGTSELEFFDAQDTLWYGNDLPQGVCIKNIFSDDGID 1629
G+ Y G GC T+TDIY + + + GP++ LD + N+V + WLL ++H+ G++ G GGD LRIQSTG D++E+R HGGS+ F T VTSWDT K Y+ RSF+ CVSE+L D C+G A N GECRMDII SE+G MGY ++ESYG++WKVRG+C++ NP+VF+ T V GD+I SDI+ YYG YS+GH GG+W N+MHDN QYGFDPHDDSD L I++N V+ N NHGIIASKRCNNV+I++N VYDGG AVGIFLHRSSD V N V DM+DAGMA++E+M A I++N F+ VK+GIRLS+G++ N V N+F + +G+YTYQG+D P +G DN F N + GVK + ++ IV TDN F + E F D +D +W N +P +C+K D ID
Sbjct: 398 GKNYIRGGGCATLTDIYTA--QGGHNDDGPLFVLDSNDNVVGGSP--TGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKG---DKNID 833
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: Mannuronan (C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 426 bits (1096), Expect = 1.090e-136 Identity = 243/529 (45.94%), Postives = 304/529 (57.47%), Query Frame = 1
Query: 19 GVETDGICCDIDCGTCGGGDCRRRGNGLEAGDCCTRFISENGAPCSESGSAPCIIDDVADGDIPTTLSPTPLMTIPTTCAASTGRPTFRYAASTGVNGRVYAEGEGCFTITDIYKSRLESDGSGKGPIYNLDDSYNIVLNPEVLSNK---WLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTGDV--CEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVRGFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVSNGRPSDNLFENNRILSARSGVKFKDSDDIVITDNVFTGTSELEFFDAQDTLWYGNDLPQG 1590
GV CC CG CGG GL DCCT IS CS +G+APCI+D + G PT G + ST + ++ G GC T+TD+Y ++ SG GP+Y LD S NIV ++ WLLT+ L I G Y G+S GGD D LRIQST DDF E+R GGS+ F T VTSWDT + YEGGRSF+NCV++ D+ C G + ERGECRMDII+S +G MG+F +ESYGLTWKVRG C+DLSN ++ D NVYGD+ GS+I+ YYG YSYGHQGGVW +N M DN YGFDPHDDSD LTI+ N V+ N NHGIIASKRCNNV+IY AL+E+ A+IY+N K+GIRLSLGS+DN +H+NTF+ S++GLYTY+GSDDP ++GR DN F+ N I + +K K+ DD T+NVF EF D+ DT+W ND+ G
Sbjct: 316 GVLKGDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDISNL---CSVTGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIA---SISTSSDSSSFSGG-GCATLTDMYNTQ-----SGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIY--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGG 829
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Match: Mannuronan (C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 2.150e-129 Identity = 218/445 (48.99%), Postives = 281/445 (63.15%), Query Frame = 1
Query: 283 RYAASTGVNGRVYAEGE-------GCFTITDIYKSRLESDGSGKGPIYNLD-DSYNIVLNPEVLSNKWLLTAELHITGGAIFYCRGSSIGGDCDELRIQSTGPDDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYEGGRSFLNCVSEKLTGD--VCEGMAQNERGECRMDIINSEIGYMGYFSSESYGLTWKVRGFCTDLSNPDVFDTTNVYGDLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTISHNEVFNNVNHGIIASKRCNNVQIYNNKVYDGGAEAVGIFLHRSSDYAIVHDNVVSDMQDAGMALLETMNADIYNNDFSGVKFGIRLSLGSSDNYVHENTFEDVSSHGLYTYQGSDDPTEGVSNGRPSDNLFENNRILSARSGVKFKDSDDIVITDNVF-TGTSE---LEFFDAQDTLWYGN 1575
RYA G R+Y E GC T+ I++SR +GKGP+Y +D DS N+ + + WLLT EL++ G GS GGD DELR+ ST + F +RAHGGS+ F ST V SWDT +P GRS+++ +SE +T + CEG A+N GE RMDI +SEIGY+GY+ SESYGLTWKVRGFC D SNP+VFD NVYG++ SDIHH +G Y+YGHQ G W N+MHDN YGFDPHDDSD+LTI NEV+NN HGIIASKRCN V I N+VY G + GIFLHRSSD AIV N V D DAG+A+LE+ NAD+ N F K+G+R S+G +DN NT + + + Y+Y G+D+P + VS+GR +N+F N A +K K++D DNVF G ++ + F +A + L GN
Sbjct: 47 RYA---GTTARLYLESADNGTTRGGCVTLGQIWESR-----AGKGPLYAVDPDSGNVSTSA---TGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTN-ETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEP-DVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGN 478 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig91.17174.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig91.17174.1 >prot_E_fasciculatus_S2_contig91.17174.1 ID=prot_E_fasciculatus_S2_contig91.17174.1|Name=mRNA_E_fasciculatus_S2_contig91.17174.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=562bp CSNGLIGVETDGICCDIDCGTCGGGDCRRRGNGLEAGDCCTRFISENGAPback to top mRNA from alignment at E_fasciculatus_S2_contig91:4170..10466+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig91.17174.1 ID=mRNA_E_fasciculatus_S2_contig91.17174.1|Name=mRNA_E_fasciculatus_S2_contig91.17174.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6297bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig91:4170..10466+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig91:4170..10466+ >mRNA_E_fasciculatus_S2_contig91.17174.1 ID=mRNA_E_fasciculatus_S2_contig91.17174.1|Name=mRNA_E_fasciculatus_S2_contig91.17174.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1686bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig91:4170..10466+ (Ectocarpus fasciculatus EfasUO2)back to top |