mRNA_E_fasciculatus_S2_contig905.17146.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: 1-alkyl-2-acetylglycerophosphocholine (esterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH9_ECTSI) HSP 1 Score: 616 bits (1588), Expect = 4.760e-211 Identity = 317/360 (88.06%), Postives = 325/360 (90.28%), Query Frame = 1
Query: 1 TQMGVVGASIILGLEGYLRSDGAPSLGDLLRSSPSWSSLAGSAHAWTVSAAVALCLVCLVSDLRTGLSRSAYQTRYLAREQARCIAKFSKMPGFFTEHLCGFYGAGFESGHFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQLRVKDA 1080
TQMGV+GASIILGLEG L SD APSLGDLLRS VSAA ALCLVCLVSDLRTGLSRSAYQTRYL REQARCIAKFSKMPGFFTEHLCGFYG GFESGHFH PGVPCFPAAPVARG AKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVA+FLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAP+NHAFR LAQLRRRGREI LTRAHLA+LARGSATDLE CRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSR GA MDPEET GYSMAFIMD WTFPCSEEARAQ VDIPLVV+T+D FLG+EGKKNEERLV+NAVRMVRDGANDL IQLRVKDA
Sbjct: 229 TQMGVIGASIILGLEGSLLSDSAPSLGDLLRSXXXXXXXXXXXXXXXVSAAAALCLVCLVSDLRTGLSRSAYQTRYLDREQARCIAKFSKMPGFFTEHLCGFYGPGFESGHFHAPGVPCFPAAPVARGEAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAIFLEHNDGSGSSCMFPDGRITTYAKAPNLKDVGAPDNHAFR--LAQLRRRGREIGLTRAHLARLARGSATDLETCRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRGGAGMDPEET--GYSMAFIMDGWTFPCSEEARAQSVDIPLVVITSDGFLGAEGKKNEERLVDNAVRMVRDGANDLAIQLRVKDA 584
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV7_ECTSI) HSP 1 Score: 163 bits (413), Expect = 6.230e-44 Identity = 80/93 (86.02%), Postives = 84/93 (90.32%), Query Frame = 1
Query: 1078 AGHTNFSDSPMFSPGPLRKLQGAGDIDCVTFIDQVTRLALCAFEIFLRKRTGSGDEVKPP--GDLASVVLGEDLAVAFPEARVKRVCAGGVLP 1350
AGHTNFSDSP+F+PGPLRKLQGAGDIDCV FIDQVTRLALCA EIFLR+RT SGD K P GDL SVVLGEDLAVAFPEARVKRVCAGGV+P
Sbjct: 4 AGHTNFSDSPLFAPGPLRKLQGAGDIDCVIFIDQVTRLALCALEIFLRRRTSSGDAAKTPAPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMP 96
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: 1-alkyl-2-acetylglycerophosphocholine (esterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXZ7_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.850e-32 Identity = 134/471 (28.45%), Postives = 197/471 (41.83%), Query Frame = 1
Query: 136 WTVSAAVALCLVCLVSDLRTGLSRSAYQTRYLAR-EQARCIAKFSKMPGFFTEHLCGFYGAGFESGHFHGPG---VPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQ-----------------------------------GYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNLKDV-GAPENHAFRQVLAQLRRRGREIQLTRAHLAKLA---RGSATDLEACRLV------GLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQ--LRVKDAGHTNFSDSPMFSPGPLRKLQGAG---------DIDCVTFID-------QVTRLALCAFEIFLRKRTGSGDEVKPPGDLASVVLGEDLAVAFPEARVKRVCAGGVL 1347
W+V A AL C+++D+R L+R+A++ Y + +AKF+ MP H+ F+ + P FP AP A P+V+F HGLGGNRS+ + + A A+ GYV + +E NDG+ + P GR T Y P+ ++ G + +R+ AQL RR RE +L H LA G +D A V +D GHS+G TVL++L + E SR +D + + A +MD WT P S+ ARA +PLVVMT + F + ++ E+ LV A V D + L++ D P P +L + C ++T+LAL AFE+ L+ GS + S VLGE A+ FP+A+V AGG L
Sbjct: 188 WSVGWAAALVAACVLADVREALTRAAFKLPYFGGLKDTSAVAKFASMPPLVWSHVASMRDVAFDGAYVRCTADALAPAFPLAPCAAAAGGWPIVVFFHGLGGNRSLNSSYAAELASHSNSYPTFTTLSPYSYRSXXXXXXXXXXXXXXXXXXGYVVLCVESNDGTATLTTLPSGRSTYYTPCPHRPEIEGLGLDREWRE--AQLMRRMRECELVFGHAQALAGPVNGQKSDFTALASVLDPANGTSAQQLDASAIGLYGHSYGACTVLELLH-QSEALSRV---VDADRIKA----AVVMDPWTMPLSDAARAHATAVPLVVMTCEGFQYANNREREDALVAAAAARVAAAPADGPARAVLQINDCTQRWLFRCEAKRPTPRLQLPALPCARAAAALCQLQCTRMTHPPAALDARLTQLALSAFEVLLK---GSRE-----AHHVSAVLGEQAAL-FPQAKVTCAAAGGAL 639
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: platelet-activating (factor acetylhydrolase n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0DC0C) HSP 1 Score: 93.2 bits (230), Expect = 2.980e-16 Identity = 105/383 (27.42%), Postives = 164/383 (42.82%), Query Frame = 1
Query: 253 IAKFSKMPGFFTEHLCGFYGAGFESGHFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRIT------TYAKAPNLKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSA------TDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQL-RVKDAGHTNFSDSPMFS---PGPLRKLQGAGDIDCVTFIDQVTRLALCAFEIFLRKRTG---SGDEVKP--PGDLASVVLGEDLAVAFPEARVKRVCAG 1338
++KF GF + L F+G+ +P +P+ G K P+VIFSHGLG R++Y+ G A+ G++ +EH DGS S+ + + T+ + V E FR Q++RR +E + + L RG + TD + +L G ID + A +GHSFGG T +Q LS++R R G +DP W P EE ++ V PL + ++ F + N +M + ++D ++ +K + H NF D S G L KL+G DID I + +L FL+K G D+ P GD A+++ G + + CAG
Sbjct: 107 LSKFLGTHGFMAKLLKLFFGS---------KTIPAKWNSPLRTGE-KYPLVIFSHGLGALRTIYSAIGNDLASYGFIVAVVEHRDGSASATYYFKDELAVTKDDKTWLYVQDHLPVNESEKKCFRNW--QVKRRAQECSQALSLILDLDRGISVKNVLNTDFDMKQLKGS---IDRNKIAIIGHSFGGATTIQALSEDRR--FRCGIALDP---------------WMQPLGEEVYSR-VQQPLFFINSEQF----------QYCANICKMKKLYSHDRERKMITIKGSVHQNFDDFTFTSGKITGHLFKLKG--DIDSTVAIRLCNKASLA----FLQKHLGLKRDFDQWDPLIEGDDANLINGTSIDTVCQLDSSLQDCAG 440
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: Platelet-activating (factor acetylhydrolase n=6 Tax=Tetrapoda TaxID=32523 RepID=Q5M7T7_RAT) HSP 1 Score: 91.3 bits (225), Expect = 1.090e-15 Identity = 98/341 (28.74%), Postives = 152/341 (44.57%), Query Frame = 1
Query: 253 IAKFSKMPGFFTEHLCGFYGAGFESGHFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSATDLEACRLVGLG-------DVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQLRVKDAGHTNFSDSPMFSPGPL--RKLQGAGDIDCVTFIDQVTRLALCAFEIFLRKRTG 1233
++KF P F L YG+ P FP R K P++IFSHGLG R++Y+ GAA A+ G++ +EH DGS S+ + + + AK N LK + E+ R+ Q+R+R +E + + + G+ + ++GL D ID + A +GHSFGG TV Q LS+++ R G +DP W FP SEE ++ V PL + + F + K+ ++ N + ++ + +K + H NF+D F G + KL GDID ID + +L FL+K G
Sbjct: 106 LSKFLGTPTFVGNILRLLYGS------LTAPASWNFPL----RTGEKYPLIIFSHGLGAFRTIYSAIGAALASYGFIVATVEHRDGSASATYYFEDQAA--AKMENRSWFYLKKIKQEESERARK--EQVRQRAKECSKALSAILDIEHGNPKE----NVLGLPFDMKQLKDSIDETKIAVMGHSFGGATVFQALSEDQR--FRCGIALDP---------------WMFPVSEELYSR-VPQPLFFINSAEF---QTPKDIAKM-KNFYQPDKERK-----MITIKGSVHQNFADGT-FVTGKIIGNKLSLKGDIDSRVAIDLTNKASLA----FLQKHLG 396
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: 1-alkyl-2-acetylglycerophosphocholine (esterase n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427XTB9_9TREE) HSP 1 Score: 89.4 bits (220), Expect = 4.920e-15 Identity = 59/163 (36.20%), Postives = 84/163 (51.53%), Query Frame = 1
Query: 343 PGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPNL----KDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSATDLEACR----LVG-LGDVIDTKRPAFVGHSFGGGTVLQVLS 804
P +P PAA VA P+V+FSHGL G R+ Y++ ++GYV + +EH DGSG C+ DG+ T+ K KD G+P QL R RE+ A +L GS D+E +VG L +D +GHSFGGGT++++L+
Sbjct: 116 PKMPVHPAAAVAPHNKPFPLVVFSHGLSGTRNTYSQMCQRLVSEGYVVLAVEHADGSGP-CVIRDGKSWTFTKLDETVWPEKDDGSPPYDRIDLRACQLDFRVREVYEAYAAFCRLMAGSQADMEIIEGSPEVVGALRGRVDIDNVKLMGHSFGGGTLMRLLT 277
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: platelet-activating (factor acetylhydrolase isoform X1 n=5 Tax=Arvicolinae TaxID=39087 RepID=UPI00201FEBB5) HSP 1 Score: 89.0 bits (219), Expect = 6.830e-15 Identity = 92/354 (25.99%), Postives = 149/354 (42.09%), Query Frame = 1
Query: 253 IAKFSKMPGFFTEHLCGFYGAGFESGHFHGPGVPCFPAAPVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSS-------CMFPDGRITTY-------AKAPN-----LKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSA------TDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQLRVKDAGHTNFSDSPMFSPGPL--RKLQGAGDIDCVTFIDQVTRLALCAFEIFLRKRTG 1233
++KF P F + L YG+ P +P+ G K P+++FSHGLGG R++Y+ G A+ G++ +EH DGS S+ C Y AK N LK + E R+ Q+R+R +E + + +A G+ +D + +L G ID + A +GHSFGG TV+Q LS+++ + +D W +P SEE ++ + PL + + F S+ + + + G I +R + H NF+D F G + KL G+ID +D + + +L FL+K G
Sbjct: 106 LSKFLGTPHFIGKFLNFLYGS---------MKTPASWNSPLRTGE-KYPLIVFSHGLGGFRTIYSAIGIGLASYGFIVAAVEHRDGSASATHNLICMCXXXXXXXXXYYFDDQMAAKTDNKSWLYLKMLKQEEEERVRK--EQVRQRAKECSQALSAILDIAYGNPKENILDSDFDLEKLKG---AIDGDKIAVIGHSFGGATVIQTLSEDQR-----------------FKCGIALDPWMYPVSEELHSK-IFQPLFFINSAQFQSSKA-------IEKMKKFYQPGKERKMITIR--GSVHQNFADFT-FVTGKIIGNKLTLKGEIDSGVAMDLINKASLA----FLQKHLG 412
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: Putative (phospholipase n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6C7B7_9TREE) HSP 1 Score: 87.8 bits (216), Expect = 1.510e-14 Identity = 82/285 (28.77%), Postives = 125/285 (43.86%), Query Frame = 1
Query: 349 VPCFPAAP-VARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSS-CMFP-------DGRITTYAKAPNLKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSATDLEACRLVG---------LGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPC---SEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQLRVKDAGHTNFSDSPMFSPGPLRKLQ 1140
+P +P AP + K P+VIFSHGL G R Y+++ +A A++GYV + +EH DGSG + CM P + R+ Y K +L + QL R EI +L + +++ L G L +D + GHSFGGGT+L +LS S + P A +D W P S++ PL+V+ + F +E + +RL ++MV+ L + V AGH +FSD P+ +P Q
Sbjct: 117 MPVYPLAPLIPPPTHKYPLVIFSHGLAGTRHTYSQYCSALASEGYVVLAVEHRDGSGPAVCMPPQEGDKEDESRVMYYIKQTDLVWPSGEDKSLTHFRTLQLDLRTHEIYEAFYSFKRLLSEADENVKVEGLEGEKRKDWVGSLKGNVDWEELRLTGHSFGGGTLLHLLSTP----SPDSRHLPP----LPVKQAIALDPWLDPIPLPSDKLDPPSPLPPLLVLNSTGF--TEWSVHFDRL----MKMVKKAKGSL---ITVNGAGHQSFSDFPLLNPATQSSAQ 384
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: Platelet-activating (factor acetylhydrolase n=10 Tax=Mus TaxID=862507 RepID=PAFA_MOUSE) HSP 1 Score: 86.3 bits (212), Expect = 4.560e-14 Identity = 86/307 (28.01%), Postives = 139/307 (45.28%), Query Frame = 1
Query: 367 APVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKL----------ARGSATDLEACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQL-RVKDAGHTNFSDSPMFSPGPL--RKLQGAGDIDCVTFIDQVTRLALCAFEIFLRKRTG 1233
+P+ G K P+++FSHGLG R++Y+ G A+ G++ +EH D S S+ F + ++ AK N L+ V E+ + R+ Q R I+ +RA A L GSA D++ + D ID + A +GHSFGG TVLQ LS+++ R G +DP W +P +EE ++ + PL+ + + F + + +M + D ++ +K + H NF D F G + KL G+ID ID + ++ FL+K G
Sbjct: 135 SPLRTGE-KYPLIVFSHGLGAFRTIYSAIGIGLASNGFIVATVEHRDRSASATYFFEDQVA--AKVENRSWLYLRKVKQEESESVRKEQVQQR----AIECSRALSAILDIEHGDPKENVLGSAFDMKQLK-----DAIDETKIALMGHSFGGATVLQALSEDQR--FRCGVALDP---------------WMYPVNEELYSRTLQ-PLLFINSAKF----------QTPKDIAKMKKFYQPDKERKMITIKGSVHQNFDDFT-FVTGKIIGNKLTLKGEIDSRVAIDLTNKASMA----FLQKHLG 396
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Match: platelet-activating (factor acetylhydrolase isoform X1 n=4 Tax=Murinae TaxID=39107 RepID=UPI001487029A) HSP 1 Score: 86.7 bits (213), Expect = 4.740e-14 Identity = 82/298 (27.52%), Postives = 137/298 (45.97%), Query Frame = 1
Query: 367 APVARGRAKRPMVIFSHGLGGNRSMYAEHGAAYAAQGYVAVFLEHNDGSGSSCMFPDGRITTYAKAPN-----LKDVGAPENHAFRQVLAQLRRRGREIQLTRAHLAKLARGSATDL---EACRLVGLGDVIDTKRPAFVGHSFGGGTVLQVLSDERERGSRAGAKMDPEETETGYSMAFIMDAWTFPCSEEARAQGVDIPLVVMTNDNFLGSEGKKNEERLVNNAVRMVRDGANDLTIQLRVKDAGHTNFSDSPMFSPGPL-RKLQGAGDIDCVTFIDQVTRLALCAFEIFLRKRTG 1233
+P+ G K P+++FSHGLG R++Y+ G A+ G++ +EH D S S+ + + + AK N +K + E+ R+ Q+R+R +E + L + G + A + L D ID + A +GHSFGG TV+Q LS+++ R G +DP W +P SEE ++ V PL + + F + K+ ++ N + G I +K + H NF+D + + +KL G++D ID + +L FL+K G
Sbjct: 193 SPLRTGE-KYPLIVFSHGLGAFRTIYSAIGIGLASNGFIVATVEHRDRSASATYYFEDQAA--AKMENRSWFYVKKMKQEESERIRK--EQVRQRAKECSQALSALLDIEHGKPKENVLGSAFDVKQLKDAIDENKIAVIGHSFGGATVIQALSEDQR--FRCGVALDP---------------WMYPVSEELYSR-VPQPLFFINSAQF---QTPKDITKMKN----FYQPGRERKMIT--IKGSVHQNFADFTFVTSKIIGKKLTLKGEMDSCVAIDLTNKASLA----FLQKHLG 454 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig905.17146.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig905.17146.1 >prot_E_fasciculatus_S2_contig905.17146.1 ID=prot_E_fasciculatus_S2_contig905.17146.1|Name=mRNA_E_fasciculatus_S2_contig905.17146.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=462bp MGVVGASIILGLEGYLRSDGAPSLGDLLRSSPSWSSLAGSAHAWTVSAAVback to top mRNA from alignment at E_fasciculatus_S2_contig905:19082..26027- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig905.17146.1 ID=mRNA_E_fasciculatus_S2_contig905.17146.1|Name=mRNA_E_fasciculatus_S2_contig905.17146.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6946bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig905:19082..26027- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig905:19082..26027- >mRNA_E_fasciculatus_S2_contig905.17146.1 ID=mRNA_E_fasciculatus_S2_contig905.17146.1|Name=mRNA_E_fasciculatus_S2_contig905.17146.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1386bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig905:19082..26027- (Ectocarpus fasciculatus EfasUO2)back to top |