mRNA_E_fasciculatus_S2_contig9036.17128.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: Ap4A (phosphorylase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY6_ECTSI) HSP 1 Score: 152 bits (383), Expect = 6.720e-42 Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 1
Query: 1 SPGDAAAAATNTVPVSTLPPYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVTFGAS 264
+PGDA A +TVPVSTLPPYNAVLT RWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVA+VREPGALAVLEGVTFGAS
Sbjct: 420 TPGDATA---STVPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGAS 504
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L694_9PHAE) HSP 1 Score: 154 bits (388), Expect = 7.050e-42 Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 1
Query: 1 SPGDAAAAATNTVPVSTLPPYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVTFGASR 267
+PGDAAA +T PVSTLPPYNAVLT RWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVA+VREPGALAVLEGVTFGASR
Sbjct: 578 TPGDAAA---STAPVSTLPPYNAVLTPRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVASVREPGALAVLEGVTFGASR 663
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: Phosphorylase ((Fragment) n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1F3S4_9CHLR) HSP 1 Score: 60.5 bits (145), Expect = 3.090e-10 Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 52 LPPYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDK 177
LPPYN +LTRRW+ L PRSR + I +NG+GF G+ VRD+
Sbjct: 6 LPPYNLLLTRRWMFLAPRSRSSYASISINGLGFAGSFFVRDE 47
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: Phosphorylase (n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CNC5_9PROT) HSP 1 Score: 63.2 bits (152), Expect = 9.310e-10 Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 58 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVTFG 258
PYN +LTRRWL+ VPR+R + I VN +GF G+L VRD+A +AAV+ G +AVL V G
Sbjct: 241 PYNLLLTRRWLLAVPRAREHFDSISVNALGFAGSLFVRDEAQ------LAAVKRAGPMAVLRAVAEG 301
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: Phosphorylase (n=2 Tax=Sinimarinibacterium sp. CAU 1509 TaxID=2562283 RepID=A0A4V5LXM1_9GAMM) HSP 1 Score: 61.2 bits (147), Expect = 5.080e-9 Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 61 YNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVT 252
YN ++TRRW+M+VPR++ W G+ VN + F GALL RD A A +RE G A+L VT
Sbjct: 261 YNWLMTRRWMMVVPRTQERWDGMSVNALAFAGALLARDAAEATR------IREAGPAAILSAVT 318
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: ATP (adenylyltransferase n=1 Tax=Aggregicoccus sp. 17bor-14 TaxID=2583808 RepID=A0A6I2GTI3_9DELT) HSP 1 Score: 60.5 bits (145), Expect = 8.370e-9 Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 58 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGV 249
PYN ++TRRW++LVPR W GI++N MGF G+LLVR +A VRE G AVL V
Sbjct: 230 PYNLLVTRRWMILVPRRAAAWEGIELNAMGFAGSLLVRTHQQ------LARVREAGPAAVLRAV 287
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: ATP_transf (domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5TPW7_9GAMM) HSP 1 Score: 59.3 bits (142), Expect = 1.140e-8 Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 58 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGV 249
PYN ++TRRW+M VPR+R W GI VN +GF G+LLV D +A +R G + VL V
Sbjct: 149 PYNLLVTRRWMMAVPRTRERWEGISVNALGFAGSLLVPDDE------ALARLRAAGPMRVLAAV 206
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: Uncharacterized (protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C3D5_CAFRO) HSP 1 Score: 59.3 bits (142), Expect = 2.540e-8 Identity = 32/66 (48.48%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 61 YNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVRDKAFAGEGAGVAAVREPGALAVLEGVTFG 258
YN +LTRRW+M+VPR+R WG + VN +GF G LL R A GE A+ E G L L V G
Sbjct: 278 YNLLLTRRWMMVVPRTRERWGPVSVNAVGFAGLLLARGDA--GE-----ALSEAGPLTALRAVAAG 336
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: ATP (adenylyltransferase (Fragment) n=1 Tax=Corallococcus llansteffanensis TaxID=2316731 RepID=A0A3A8NBY7_9DELT) HSP 1 Score: 55.5 bits (132), Expect = 2.870e-8 Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 58 PYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVR 171
PYN + TR W+MLVPRSR E G++VN +GF G+LLVR
Sbjct: 13 PYNLLATREWMMLVPRSRAEHLGVNVNALGFAGSLLVR 50
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Match: ATP (adenylyltransferase n=1 Tax=Corallococcus terminator TaxID=2316733 RepID=A0A3A8HU35_9DELT) HSP 1 Score: 58.9 bits (141), Expect = 2.980e-8 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 43 VSTLPPYNAVLTRRWLMLVPRSRREWGGIDVNGMGFLGALLVR 171
+ T PYN ++TR W+MLVPRSR E G++VNG+GF G+LLVR
Sbjct: 220 LGTASPYNLLVTRDWMMLVPRSRAEHLGVNVNGLGFAGSLLVR 262 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9036.17128.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9036.17128.1 >prot_E_fasciculatus_S2_contig9036.17128.1 ID=prot_E_fasciculatus_S2_contig9036.17128.1|Name=mRNA_E_fasciculatus_S2_contig9036.17128.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=90bp SPGDAAAAATNTVPVSTLPPYNAVLTRRWLMLVPRSRREWGGIDVNGMGFback to top mRNA from alignment at E_fasciculatus_S2_contig9036:5895..6164- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9036.17128.1 ID=mRNA_E_fasciculatus_S2_contig9036.17128.1|Name=mRNA_E_fasciculatus_S2_contig9036.17128.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=270bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9036:5895..6164- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9036:5895..6164- >mRNA_E_fasciculatus_S2_contig9036.17128.1 ID=mRNA_E_fasciculatus_S2_contig9036.17128.1|Name=mRNA_E_fasciculatus_S2_contig9036.17128.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=270bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9036:5895..6164- (Ectocarpus fasciculatus EfasUO2)back to top |